Multiple sequence alignment - TraesCS7D01G202100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G202100 chr7D 100.000 4054 0 0 1 4054 160962027 160957974 0.000000e+00 7487.0
1 TraesCS7D01G202100 chr7D 99.593 983 3 1 1 983 38671151 38670170 0.000000e+00 1792.0
2 TraesCS7D01G202100 chr7D 99.390 984 6 0 1 984 17509305 17510288 0.000000e+00 1784.0
3 TraesCS7D01G202100 chr7D 99.390 983 6 0 1 983 109487927 109488909 0.000000e+00 1783.0
4 TraesCS7D01G202100 chr7D 91.096 292 24 2 2770 3060 606634643 606634353 1.060000e-105 394.0
5 TraesCS7D01G202100 chr1B 84.586 2089 287 32 987 3060 514574320 514572252 0.000000e+00 2041.0
6 TraesCS7D01G202100 chr3D 99.390 984 6 0 1 984 32748763 32747780 0.000000e+00 1784.0
7 TraesCS7D01G202100 chr3D 94.595 370 19 1 3686 4054 400637441 400637072 4.550000e-159 571.0
8 TraesCS7D01G202100 chr3D 94.580 369 19 1 3687 4054 309821928 309822296 1.630000e-158 569.0
9 TraesCS7D01G202100 chr3D 94.102 373 20 2 3683 4054 40084874 40084503 2.110000e-157 566.0
10 TraesCS7D01G202100 chr3D 94.086 372 21 1 3683 4054 83604300 83603930 7.610000e-157 564.0
11 TraesCS7D01G202100 chr3D 93.899 377 17 3 3683 4054 417517234 417516859 7.610000e-157 564.0
12 TraesCS7D01G202100 chr3D 94.340 53 2 1 3009 3060 523818801 523818853 3.360000e-11 80.5
13 TraesCS7D01G202100 chr6D 99.390 983 6 0 1 983 455004224 455003242 0.000000e+00 1783.0
14 TraesCS7D01G202100 chr5D 99.289 984 7 0 1 984 557813929 557814912 0.000000e+00 1779.0
15 TraesCS7D01G202100 chr5D 98.892 993 8 1 1 990 561606681 561607673 0.000000e+00 1770.0
16 TraesCS7D01G202100 chr5D 94.102 373 20 2 3683 4054 318456897 318457268 2.110000e-157 566.0
17 TraesCS7D01G202100 chr2D 99.290 986 4 1 1 983 638630648 638631633 0.000000e+00 1779.0
18 TraesCS7D01G202100 chrUn 99.289 984 6 1 1 983 152287773 152288756 0.000000e+00 1777.0
19 TraesCS7D01G202100 chr2B 78.485 1901 383 25 987 2874 53033585 53035472 0.000000e+00 1221.0
20 TraesCS7D01G202100 chr6B 81.430 797 145 3 2264 3060 51314675 51313882 0.000000e+00 649.0
21 TraesCS7D01G202100 chr4D 94.624 372 19 1 3683 4054 479428868 479429238 3.510000e-160 575.0
22 TraesCS7D01G202100 chr1D 94.580 369 20 0 3686 4054 212025848 212026216 4.550000e-159 571.0
23 TraesCS7D01G202100 chr1D 94.324 370 20 1 3686 4054 216392650 216393019 2.110000e-157 566.0
24 TraesCS7D01G202100 chr7A 95.286 297 12 2 3080 3376 162115376 162115082 1.710000e-128 470.0
25 TraesCS7D01G202100 chr7B 95.181 249 12 0 3322 3570 123273737 123273489 1.060000e-105 394.0
26 TraesCS7D01G202100 chr7B 91.923 260 19 2 3066 3325 123277456 123277199 2.980000e-96 363.0
27 TraesCS7D01G202100 chr7B 92.000 125 5 3 3566 3690 123273163 123273044 1.940000e-38 171.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G202100 chr7D 160957974 160962027 4053 True 7487.000000 7487 100.000000 1 4054 1 chr7D.!!$R2 4053
1 TraesCS7D01G202100 chr7D 38670170 38671151 981 True 1792.000000 1792 99.593000 1 983 1 chr7D.!!$R1 982
2 TraesCS7D01G202100 chr7D 17509305 17510288 983 False 1784.000000 1784 99.390000 1 984 1 chr7D.!!$F1 983
3 TraesCS7D01G202100 chr7D 109487927 109488909 982 False 1783.000000 1783 99.390000 1 983 1 chr7D.!!$F2 982
4 TraesCS7D01G202100 chr1B 514572252 514574320 2068 True 2041.000000 2041 84.586000 987 3060 1 chr1B.!!$R1 2073
5 TraesCS7D01G202100 chr3D 32747780 32748763 983 True 1784.000000 1784 99.390000 1 984 1 chr3D.!!$R1 983
6 TraesCS7D01G202100 chr6D 455003242 455004224 982 True 1783.000000 1783 99.390000 1 983 1 chr6D.!!$R1 982
7 TraesCS7D01G202100 chr5D 557813929 557814912 983 False 1779.000000 1779 99.289000 1 984 1 chr5D.!!$F2 983
8 TraesCS7D01G202100 chr5D 561606681 561607673 992 False 1770.000000 1770 98.892000 1 990 1 chr5D.!!$F3 989
9 TraesCS7D01G202100 chr2D 638630648 638631633 985 False 1779.000000 1779 99.290000 1 983 1 chr2D.!!$F1 982
10 TraesCS7D01G202100 chrUn 152287773 152288756 983 False 1777.000000 1777 99.289000 1 983 1 chrUn.!!$F1 982
11 TraesCS7D01G202100 chr2B 53033585 53035472 1887 False 1221.000000 1221 78.485000 987 2874 1 chr2B.!!$F1 1887
12 TraesCS7D01G202100 chr6B 51313882 51314675 793 True 649.000000 649 81.430000 2264 3060 1 chr6B.!!$R1 796
13 TraesCS7D01G202100 chr7B 123273044 123277456 4412 True 309.333333 394 93.034667 3066 3690 3 chr7B.!!$R1 624

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
343 344 1.557371 GGAGGCTTAGTCCAGAAGCTT 59.443 52.381 0.00 0.0 46.93 3.74 F
1001 1006 1.272313 TGCCCCGACTCACTAGTACTT 60.272 52.381 0.00 0.0 35.56 2.24 F
1512 1519 0.032952 TGGGCTTCCGCGACATATAC 59.967 55.000 8.23 0.0 36.88 1.47 F
2590 2598 0.101219 GGAGCTTTTAATGCAGCCCG 59.899 55.000 5.65 0.0 36.62 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1196 1201 0.107017 CTTGCCCCACATAGACAGGG 60.107 60.0 0.00 0.0 42.94 4.45 R
2664 2672 0.034756 AGCACTGTCGCAACATGGTA 59.965 50.0 0.00 0.0 34.13 3.25 R
2917 2925 0.171903 AGCGCCAAAAGCAGCAATAG 59.828 50.0 2.29 0.0 44.04 1.73 R
4019 7822 0.032130 CCACCTCGGTCATATCGTGG 59.968 60.0 0.00 0.0 44.04 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
343 344 1.557371 GGAGGCTTAGTCCAGAAGCTT 59.443 52.381 0.00 0.00 46.93 3.74
705 706 8.471609 TCCAAACTAAAAAGAAACCAGGTTTAG 58.528 33.333 18.08 12.44 35.77 1.85
1001 1006 1.272313 TGCCCCGACTCACTAGTACTT 60.272 52.381 0.00 0.00 35.56 2.24
1004 1009 3.635836 GCCCCGACTCACTAGTACTTATT 59.364 47.826 0.00 0.00 35.56 1.40
1055 1060 6.487103 GCTGCAACATATCCTACAACTTTAC 58.513 40.000 0.00 0.00 0.00 2.01
1056 1061 6.093495 GCTGCAACATATCCTACAACTTTACA 59.907 38.462 0.00 0.00 0.00 2.41
1088 1093 2.025699 GGGGCAGGTGGTAAACTATGAA 60.026 50.000 0.00 0.00 0.00 2.57
1094 1099 5.472137 GCAGGTGGTAAACTATGAAAAGTCA 59.528 40.000 0.00 0.00 38.41 3.41
1127 1132 5.776519 TTAGCAAAAACACAAAGCAACAG 57.223 34.783 0.00 0.00 0.00 3.16
1129 1134 4.314121 AGCAAAAACACAAAGCAACAGAA 58.686 34.783 0.00 0.00 0.00 3.02
1130 1135 4.152223 AGCAAAAACACAAAGCAACAGAAC 59.848 37.500 0.00 0.00 0.00 3.01
1142 1147 2.498167 CAACAGAACAAGAGGGAGGTG 58.502 52.381 0.00 0.00 0.00 4.00
1148 1153 3.589288 AGAACAAGAGGGAGGTGCTAAAT 59.411 43.478 0.00 0.00 0.00 1.40
1157 1162 3.542648 GGAGGTGCTAAATACCCTCAAC 58.457 50.000 6.85 0.00 44.34 3.18
1161 1166 6.321821 AGGTGCTAAATACCCTCAACATTA 57.678 37.500 0.00 0.00 39.05 1.90
1187 1192 3.917760 GCCAGGTCCGAGCGCTAT 61.918 66.667 11.50 0.00 0.00 2.97
1188 1193 2.336809 CCAGGTCCGAGCGCTATC 59.663 66.667 11.50 0.00 0.00 2.08
1190 1195 1.736586 CAGGTCCGAGCGCTATCTT 59.263 57.895 11.50 0.00 0.00 2.40
1196 1201 1.663074 CGAGCGCTATCTTGGCCTC 60.663 63.158 11.50 0.00 0.00 4.70
1229 1234 0.799393 GGCAAGCTCGAAAGAAGGTC 59.201 55.000 0.00 0.00 41.32 3.85
1301 1306 1.839994 AGGATGCTCTCGAAAATGGGA 59.160 47.619 0.00 0.00 0.00 4.37
1304 1309 3.443681 GGATGCTCTCGAAAATGGGAAAA 59.556 43.478 0.00 0.00 0.00 2.29
1308 1313 3.502211 GCTCTCGAAAATGGGAAAAGACA 59.498 43.478 0.00 0.00 0.00 3.41
1312 1317 5.183140 TCTCGAAAATGGGAAAAGACATTCC 59.817 40.000 0.00 0.00 46.74 3.01
1358 1363 0.725784 CGACCTTTGCAATGTCGTGC 60.726 55.000 29.39 8.92 44.96 5.34
1400 1405 2.204463 TGTGAGGAGATTGGGGCAATA 58.796 47.619 0.00 0.00 33.90 1.90
1403 1408 3.823304 GTGAGGAGATTGGGGCAATAATC 59.177 47.826 0.00 0.00 33.90 1.75
1409 1414 2.051334 TTGGGGCAATAATCTGTCGG 57.949 50.000 0.00 0.00 0.00 4.79
1414 1419 3.181458 GGGGCAATAATCTGTCGGTTCTA 60.181 47.826 0.00 0.00 0.00 2.10
1430 1435 3.219281 GTTCTAGTGGGCAAAACAGGAA 58.781 45.455 0.00 0.00 0.00 3.36
1472 1479 0.901124 AGTTGGGAGCTGCTGACTAG 59.099 55.000 7.01 0.00 0.00 2.57
1476 1483 2.105930 GAGCTGCTGACTAGGCCG 59.894 66.667 7.01 0.00 0.00 6.13
1497 1504 1.064824 AGAAGGATGGAGGGATGGGC 61.065 60.000 0.00 0.00 0.00 5.36
1503 1510 4.570874 GGAGGGATGGGCTTCCGC 62.571 72.222 1.79 0.00 36.58 5.54
1512 1519 0.032952 TGGGCTTCCGCGACATATAC 59.967 55.000 8.23 0.00 36.88 1.47
1513 1520 0.032952 GGGCTTCCGCGACATATACA 59.967 55.000 8.23 0.00 36.88 2.29
1515 1522 0.784778 GCTTCCGCGACATATACAGC 59.215 55.000 8.23 0.00 0.00 4.40
1518 1525 2.882927 TCCGCGACATATACAGCTTT 57.117 45.000 8.23 0.00 0.00 3.51
1521 1528 4.046462 TCCGCGACATATACAGCTTTAAC 58.954 43.478 8.23 0.00 0.00 2.01
1524 1531 4.373717 CGCGACATATACAGCTTTAACGTC 60.374 45.833 0.00 0.00 0.00 4.34
1542 1549 1.450134 CGCTATGCTGGCCAGACAA 60.450 57.895 37.21 20.61 0.00 3.18
1566 1573 2.918345 GCGCATGCTCACAAACCCA 61.918 57.895 17.13 0.00 38.39 4.51
1605 1612 3.751698 GGGTGTTGAAAGCGAGATACTTT 59.248 43.478 0.00 0.00 39.99 2.66
1614 1621 4.338379 AGCGAGATACTTTCCCAATACC 57.662 45.455 0.00 0.00 0.00 2.73
1620 1627 6.018433 AGATACTTTCCCAATACCAGCATT 57.982 37.500 0.00 0.00 0.00 3.56
1656 1663 3.057806 CACATGCGGGTATCTCGTATACA 60.058 47.826 3.32 0.00 32.16 2.29
1665 1672 5.254901 GGTATCTCGTATACATGGAGGAGT 58.745 45.833 3.32 0.00 0.00 3.85
1699 1707 3.536570 GTGGAGCTAATGAAAGAGGACC 58.463 50.000 0.00 0.00 0.00 4.46
1700 1708 3.198853 GTGGAGCTAATGAAAGAGGACCT 59.801 47.826 0.00 0.00 0.00 3.85
1701 1709 3.198635 TGGAGCTAATGAAAGAGGACCTG 59.801 47.826 0.00 0.00 0.00 4.00
1702 1710 3.452627 GGAGCTAATGAAAGAGGACCTGA 59.547 47.826 0.00 0.00 0.00 3.86
1703 1711 4.102367 GGAGCTAATGAAAGAGGACCTGAT 59.898 45.833 0.00 0.00 0.00 2.90
1704 1712 5.397334 GGAGCTAATGAAAGAGGACCTGATT 60.397 44.000 0.00 0.00 0.00 2.57
1705 1713 6.072199 AGCTAATGAAAGAGGACCTGATTT 57.928 37.500 0.00 0.00 0.00 2.17
1706 1714 7.200434 AGCTAATGAAAGAGGACCTGATTTA 57.800 36.000 0.00 0.00 0.00 1.40
1707 1715 7.051000 AGCTAATGAAAGAGGACCTGATTTAC 58.949 38.462 0.00 0.00 0.00 2.01
1737 1745 3.675995 TGGCAGCTCCATCAACATT 57.324 47.368 1.25 0.00 40.72 2.71
1741 1749 1.547372 GCAGCTCCATCAACATTTGGT 59.453 47.619 0.00 0.00 34.48 3.67
1785 1793 1.211949 GGAATTCGAACCCCCAGATCA 59.788 52.381 0.00 0.00 0.00 2.92
1809 1817 4.941873 CCAAAGGGTAACTGTATTCTCACC 59.058 45.833 0.00 0.00 0.00 4.02
1815 1823 5.246307 GGTAACTGTATTCTCACCAAAGCT 58.754 41.667 0.00 0.00 0.00 3.74
1863 1871 0.113776 AGTGGGACGAGGAGTTGGTA 59.886 55.000 0.00 0.00 0.00 3.25
1905 1913 3.303049 TGAAGCTGAGATCATCCTAGCA 58.697 45.455 12.01 0.00 36.87 3.49
1910 1918 3.181467 GCTGAGATCATCCTAGCAACACT 60.181 47.826 5.98 0.00 34.64 3.55
1912 1920 3.133542 TGAGATCATCCTAGCAACACTGG 59.866 47.826 0.00 0.00 0.00 4.00
1948 1956 3.055094 TGAGGACTTCTATGCTTGGTTCC 60.055 47.826 0.00 0.00 0.00 3.62
1965 1973 1.607178 CCATGACAGCAAGGGCCAA 60.607 57.895 6.18 0.00 42.56 4.52
1972 1980 0.602562 CAGCAAGGGCCAATTTTCGA 59.397 50.000 6.18 0.00 42.56 3.71
1977 1985 3.514645 CAAGGGCCAATTTTCGATGAAG 58.485 45.455 6.18 0.00 0.00 3.02
1989 1997 3.510388 TCGATGAAGTCAGCCTACAAG 57.490 47.619 0.00 0.00 0.00 3.16
2012 2020 3.874543 CTCTACGTGCTACAGAGAGATGT 59.125 47.826 6.46 0.00 38.46 3.06
2013 2021 4.262617 TCTACGTGCTACAGAGAGATGTT 58.737 43.478 0.00 0.00 34.56 2.71
2015 2023 2.820197 ACGTGCTACAGAGAGATGTTGA 59.180 45.455 0.00 0.00 34.56 3.18
2019 2027 3.947834 TGCTACAGAGAGATGTTGATCGA 59.052 43.478 0.00 0.00 34.56 3.59
2034 2042 3.691342 CGACCAGGACCCGCTGAA 61.691 66.667 0.00 0.00 0.00 3.02
2038 2046 2.429930 CAGGACCCGCTGAACCAA 59.570 61.111 0.00 0.00 0.00 3.67
2039 2047 1.002134 CAGGACCCGCTGAACCAAT 60.002 57.895 0.00 0.00 0.00 3.16
2041 2049 1.134098 CAGGACCCGCTGAACCAATAT 60.134 52.381 0.00 0.00 0.00 1.28
2043 2051 1.217882 GACCCGCTGAACCAATATCG 58.782 55.000 0.00 0.00 0.00 2.92
2044 2052 0.179056 ACCCGCTGAACCAATATCGG 60.179 55.000 0.00 0.00 36.90 4.18
2104 2112 4.398319 CCAACCCAAGATACAACAGTTCT 58.602 43.478 0.00 0.00 0.00 3.01
2106 2114 6.001460 CCAACCCAAGATACAACAGTTCTTA 58.999 40.000 0.00 0.00 0.00 2.10
2116 2124 1.739067 ACAGTTCTTATGGCGGCTTC 58.261 50.000 11.43 0.00 0.00 3.86
2121 2129 0.178068 TCTTATGGCGGCTTCCTCAC 59.822 55.000 11.43 0.00 0.00 3.51
2133 2141 2.436173 GCTTCCTCACAATAGCCTACCT 59.564 50.000 0.00 0.00 0.00 3.08
2136 2144 3.300388 TCCTCACAATAGCCTACCTCTG 58.700 50.000 0.00 0.00 0.00 3.35
2153 2161 5.192927 ACCTCTGAAACTGAACATCAAACA 58.807 37.500 0.00 0.00 0.00 2.83
2154 2162 5.066505 ACCTCTGAAACTGAACATCAAACAC 59.933 40.000 0.00 0.00 0.00 3.32
2172 2180 3.420893 ACACCGTGGAATTGAATGTGAT 58.579 40.909 3.03 0.00 0.00 3.06
2181 2189 4.276926 GGAATTGAATGTGATACCCTCTGC 59.723 45.833 0.00 0.00 0.00 4.26
2199 2207 0.734253 GCGTGTGCTGTAGGAGACTG 60.734 60.000 0.00 0.00 38.90 3.51
2228 2236 1.266718 TGCAGCGCACCTTTTTCTAAG 59.733 47.619 11.47 0.00 31.71 2.18
2239 2247 5.860716 CACCTTTTTCTAAGATGCAAGCTTC 59.139 40.000 8.28 0.11 38.98 3.86
2241 2249 6.942576 ACCTTTTTCTAAGATGCAAGCTTCTA 59.057 34.615 10.38 0.00 38.98 2.10
2243 2251 7.967303 CCTTTTTCTAAGATGCAAGCTTCTAAG 59.033 37.037 10.38 9.01 38.98 2.18
2254 2262 2.861147 GCTTCTAAGGAAGGTGTGGT 57.139 50.000 7.69 0.00 46.49 4.16
2313 2321 0.179009 AATGCATGGACGGGATGGAG 60.179 55.000 0.00 0.00 0.00 3.86
2314 2322 1.348008 ATGCATGGACGGGATGGAGT 61.348 55.000 0.00 0.00 0.00 3.85
2337 2345 0.326595 TGCATGAAACCCTTCGGCTA 59.673 50.000 0.00 0.00 36.17 3.93
2387 2395 1.289160 CCTCCTCTGGAAATGGTGGA 58.711 55.000 0.00 0.00 36.83 4.02
2398 2406 2.764637 AATGGTGGACCTGGCGGAAC 62.765 60.000 0.00 0.00 36.82 3.62
2420 2428 3.508744 AAATAAATGCAGGCGACAAGG 57.491 42.857 0.00 0.00 0.00 3.61
2440 2448 1.614317 GCCTCAGCCTTGGAAAAGCTA 60.614 52.381 0.00 0.00 34.38 3.32
2464 2472 3.887110 CAGCAGAGATTAATCATTGGGCA 59.113 43.478 17.56 0.00 0.00 5.36
2473 2481 3.446442 AATCATTGGGCACTTGAGTCT 57.554 42.857 0.00 0.00 0.00 3.24
2480 2488 0.538287 GGCACTTGAGTCTTTGGCCT 60.538 55.000 3.32 0.00 37.00 5.19
2490 2498 0.179234 TCTTTGGCCTTGTGTCGACA 59.821 50.000 15.76 15.76 0.00 4.35
2503 2511 0.520404 GTCGACAGGAGCGAACTACA 59.480 55.000 11.55 0.00 39.73 2.74
2505 2513 0.240145 CGACAGGAGCGAACTACACA 59.760 55.000 0.00 0.00 0.00 3.72
2534 2542 2.605854 GATGCAGCAGACCTGGAGGG 62.606 65.000 0.00 0.00 45.52 4.30
2535 2543 3.005539 GCAGCAGACCTGGAGGGA 61.006 66.667 0.00 0.00 42.03 4.20
2536 2544 2.596851 GCAGCAGACCTGGAGGGAA 61.597 63.158 0.00 0.00 42.03 3.97
2561 2569 3.631227 CCAAGGGAGATTTGCTGAAGATC 59.369 47.826 0.00 0.00 0.00 2.75
2590 2598 0.101219 GGAGCTTTTAATGCAGCCCG 59.899 55.000 5.65 0.00 36.62 6.13
2597 2605 1.276140 TTAATGCAGCCCGGGGTACT 61.276 55.000 27.96 9.49 0.00 2.73
2621 2629 3.530910 CTGGGGCTTCGTTGTCCGT 62.531 63.158 0.00 0.00 37.94 4.69
2624 2632 1.375523 GGGCTTCGTTGTCCGTGAT 60.376 57.895 0.00 0.00 37.94 3.06
2653 2661 0.980231 GATGTCAGAGGCTCAGGGGT 60.980 60.000 18.26 0.00 0.00 4.95
2655 2663 1.610673 GTCAGAGGCTCAGGGGTGA 60.611 63.158 18.26 8.31 0.00 4.02
2664 2672 0.838122 CTCAGGGGTGAGGTTCCTGT 60.838 60.000 8.24 0.00 45.97 4.00
2666 2674 0.613777 CAGGGGTGAGGTTCCTGTAC 59.386 60.000 0.00 0.00 42.17 2.90
2672 2680 2.039879 GGTGAGGTTCCTGTACCATGTT 59.960 50.000 13.59 0.00 40.82 2.71
2680 2688 1.608025 CCTGTACCATGTTGCGACAGT 60.608 52.381 13.31 8.47 39.58 3.55
2686 2694 1.968017 ATGTTGCGACAGTGCTGGG 60.968 57.895 13.31 0.00 39.58 4.45
2721 2729 3.390183 TATGTGGCTGCGCTGGAGG 62.390 63.158 16.47 0.00 0.00 4.30
2759 2767 1.503294 TGACGCGCATACAAGTTGAA 58.497 45.000 10.54 0.00 0.00 2.69
2786 2794 0.940991 GCCAAGTTCTTGCCAAAGCG 60.941 55.000 7.00 0.00 44.31 4.68
2787 2795 0.667993 CCAAGTTCTTGCCAAAGCGA 59.332 50.000 7.00 0.00 44.31 4.93
2795 2803 1.473677 CTTGCCAAAGCGATGAATGGA 59.526 47.619 4.76 0.00 44.31 3.41
2801 2809 3.881688 CCAAAGCGATGAATGGAAGAGAT 59.118 43.478 0.00 0.00 34.82 2.75
2808 2816 4.749099 CGATGAATGGAAGAGATTCTGACC 59.251 45.833 0.00 0.00 32.04 4.02
2826 2834 1.132554 CCTGGCTATGGAGGGCATCT 61.133 60.000 0.00 0.00 38.52 2.90
2852 2860 1.224722 GAGAGATCCGCCAATTCGCC 61.225 60.000 0.00 0.00 0.00 5.54
2936 2944 0.171903 CTATTGCTGCTTTTGGCGCT 59.828 50.000 7.64 0.00 45.43 5.92
2937 2945 0.171007 TATTGCTGCTTTTGGCGCTC 59.829 50.000 7.64 0.00 45.43 5.03
2964 2972 1.374758 GTTGTGCGAGAGACCTGGG 60.375 63.158 0.00 0.00 0.00 4.45
2978 2986 2.610859 TGGGTTGAGGCTCTCCCC 60.611 66.667 30.51 28.38 39.20 4.81
3039 3047 2.038033 ACCGGGTAATGGTATGGAATCG 59.962 50.000 6.32 0.00 38.15 3.34
3082 3090 6.521151 AGCATTCCTCCATTTTAGACAAAG 57.479 37.500 0.00 0.00 0.00 2.77
3083 3091 6.248433 AGCATTCCTCCATTTTAGACAAAGA 58.752 36.000 0.00 0.00 0.00 2.52
3131 3139 2.100252 CAGGGCTTGCAATAATGGTCTG 59.900 50.000 0.00 0.00 0.00 3.51
3143 3151 1.808411 ATGGTCTGTTAAGCCGTGTG 58.192 50.000 0.00 0.00 0.00 3.82
3147 3155 1.535462 GTCTGTTAAGCCGTGTGCAAT 59.465 47.619 0.00 0.00 44.83 3.56
3175 3183 7.493743 AGATGCTTAGATGTGCTTATGAAAG 57.506 36.000 0.00 0.00 35.68 2.62
3246 3254 6.378564 TCTTACTTGGACATCTCTTCTACAGG 59.621 42.308 0.00 0.00 0.00 4.00
3247 3255 4.678256 ACTTGGACATCTCTTCTACAGGA 58.322 43.478 0.00 0.00 0.00 3.86
3258 3266 2.800881 TCTACAGGAGCATGCATACG 57.199 50.000 21.98 8.06 0.00 3.06
3287 3295 6.998258 AAGCAAAGAATTGATCGAGTTTTG 57.002 33.333 10.87 10.87 38.94 2.44
3303 3311 4.569943 AGTTTTGCGAGCATCTCTCTAAA 58.430 39.130 0.00 0.00 39.70 1.85
3306 3314 2.881074 TGCGAGCATCTCTCTAAACAC 58.119 47.619 0.00 0.00 39.70 3.32
3321 3329 8.177119 TCTCTAAACACCTTGCATTTTACATT 57.823 30.769 0.00 0.00 0.00 2.71
3330 6803 7.218773 CACCTTGCATTTTACATTGTCTTATCG 59.781 37.037 0.00 0.00 0.00 2.92
3382 6855 6.991938 AGAGAGTACAGATAAGATGATTGCC 58.008 40.000 0.00 0.00 0.00 4.52
3548 7021 2.887152 AGTGATGACTGGTTGCCTTTTC 59.113 45.455 0.00 0.00 0.00 2.29
3619 7422 7.439381 CCTTCTAATAGCGTATAAGTTTCCCA 58.561 38.462 0.00 0.00 0.00 4.37
3649 7452 0.463833 GGGTAAGGGCATCTCCAACG 60.464 60.000 0.00 0.00 36.21 4.10
3650 7453 1.095807 GGTAAGGGCATCTCCAACGC 61.096 60.000 0.00 0.00 36.21 4.84
3651 7454 1.153449 TAAGGGCATCTCCAACGCG 60.153 57.895 3.53 3.53 36.21 6.01
3668 7471 1.062525 CGCAGCGCATCCTTAAACC 59.937 57.895 11.47 0.00 0.00 3.27
3680 7483 1.227883 TTAAACCGCCTGCAACCGA 60.228 52.632 7.19 0.00 0.00 4.69
3690 7493 0.603707 CTGCAACCGACATGACCACT 60.604 55.000 0.00 0.00 0.00 4.00
3691 7494 0.884259 TGCAACCGACATGACCACTG 60.884 55.000 0.00 0.00 0.00 3.66
3692 7495 0.884704 GCAACCGACATGACCACTGT 60.885 55.000 0.00 0.00 0.00 3.55
3693 7496 1.593196 CAACCGACATGACCACTGTT 58.407 50.000 0.00 0.00 0.00 3.16
3694 7497 1.264020 CAACCGACATGACCACTGTTG 59.736 52.381 0.00 3.73 0.00 3.33
3703 7506 2.637025 CCACTGTTGGGAAACGCG 59.363 61.111 3.53 3.53 39.57 6.01
3704 7507 2.637025 CACTGTTGGGAAACGCGG 59.363 61.111 12.47 0.00 0.00 6.46
3705 7508 2.184167 CACTGTTGGGAAACGCGGT 61.184 57.895 12.47 0.00 0.00 5.68
3706 7509 0.881159 CACTGTTGGGAAACGCGGTA 60.881 55.000 12.47 0.00 0.00 4.02
3707 7510 0.179051 ACTGTTGGGAAACGCGGTAA 60.179 50.000 12.47 0.00 0.00 2.85
3708 7511 1.161843 CTGTTGGGAAACGCGGTAAT 58.838 50.000 12.47 0.00 0.00 1.89
3709 7512 1.538075 CTGTTGGGAAACGCGGTAATT 59.462 47.619 12.47 0.00 0.00 1.40
3710 7513 1.955080 TGTTGGGAAACGCGGTAATTT 59.045 42.857 12.47 0.55 0.00 1.82
3711 7514 2.030981 TGTTGGGAAACGCGGTAATTTC 60.031 45.455 12.47 11.25 34.65 2.17
3712 7515 1.893544 TGGGAAACGCGGTAATTTCA 58.106 45.000 12.47 0.00 36.69 2.69
3713 7516 2.228059 TGGGAAACGCGGTAATTTCAA 58.772 42.857 12.47 0.95 36.69 2.69
3714 7517 2.621998 TGGGAAACGCGGTAATTTCAAA 59.378 40.909 12.47 0.58 36.69 2.69
3715 7518 3.067742 TGGGAAACGCGGTAATTTCAAAA 59.932 39.130 12.47 0.00 36.69 2.44
3716 7519 4.049869 GGGAAACGCGGTAATTTCAAAAA 58.950 39.130 12.47 0.00 36.69 1.94
3732 7535 2.325509 AAAAATTCCTACGCACACGC 57.674 45.000 0.00 0.00 45.53 5.34
3733 7536 1.231221 AAAATTCCTACGCACACGCA 58.769 45.000 0.00 0.00 45.53 5.24
3734 7537 1.231221 AAATTCCTACGCACACGCAA 58.769 45.000 0.00 0.00 45.53 4.85
3735 7538 0.796312 AATTCCTACGCACACGCAAG 59.204 50.000 0.00 0.00 45.53 4.01
3736 7539 0.037697 ATTCCTACGCACACGCAAGA 60.038 50.000 0.00 0.00 45.53 3.02
3737 7540 0.037697 TTCCTACGCACACGCAAGAT 60.038 50.000 0.00 0.00 45.53 2.40
3738 7541 0.457853 TCCTACGCACACGCAAGATC 60.458 55.000 0.00 0.00 45.53 2.75
3739 7542 0.735978 CCTACGCACACGCAAGATCA 60.736 55.000 0.00 0.00 45.53 2.92
3740 7543 1.280982 CTACGCACACGCAAGATCAT 58.719 50.000 0.00 0.00 45.53 2.45
3741 7544 0.998669 TACGCACACGCAAGATCATG 59.001 50.000 0.00 0.00 45.53 3.07
3742 7545 1.061411 CGCACACGCAAGATCATGG 59.939 57.895 0.00 0.00 43.62 3.66
3743 7546 1.638388 CGCACACGCAAGATCATGGT 61.638 55.000 0.00 0.00 43.62 3.55
3744 7547 0.179181 GCACACGCAAGATCATGGTG 60.179 55.000 14.17 14.17 43.62 4.17
3745 7548 1.441738 CACACGCAAGATCATGGTGA 58.558 50.000 19.56 0.00 43.62 4.02
3746 7549 2.011947 CACACGCAAGATCATGGTGAT 58.988 47.619 19.56 0.00 40.34 3.06
3747 7550 2.011947 ACACGCAAGATCATGGTGATG 58.988 47.619 19.56 8.58 37.20 3.07
3748 7551 1.019673 ACGCAAGATCATGGTGATGC 58.980 50.000 0.00 3.06 37.20 3.91
3749 7552 1.018910 CGCAAGATCATGGTGATGCA 58.981 50.000 11.83 0.00 37.20 3.96
3750 7553 1.607148 CGCAAGATCATGGTGATGCAT 59.393 47.619 0.00 0.00 37.20 3.96
3751 7554 2.809696 CGCAAGATCATGGTGATGCATA 59.190 45.455 0.00 0.00 37.20 3.14
3752 7555 3.120304 CGCAAGATCATGGTGATGCATAG 60.120 47.826 0.00 0.00 37.20 2.23
3753 7556 3.366070 GCAAGATCATGGTGATGCATAGC 60.366 47.826 0.00 0.00 37.20 2.97
3754 7557 3.782656 AGATCATGGTGATGCATAGCA 57.217 42.857 0.00 4.86 44.86 3.49
3755 7558 4.094830 AGATCATGGTGATGCATAGCAA 57.905 40.909 0.00 0.00 43.62 3.91
3756 7559 3.819337 AGATCATGGTGATGCATAGCAAC 59.181 43.478 0.00 0.00 43.62 4.17
3757 7560 1.941975 TCATGGTGATGCATAGCAACG 59.058 47.619 0.00 1.35 43.62 4.10
3758 7561 1.941975 CATGGTGATGCATAGCAACGA 59.058 47.619 0.00 0.00 43.62 3.85
3759 7562 1.655484 TGGTGATGCATAGCAACGAG 58.345 50.000 0.00 0.00 43.62 4.18
3760 7563 1.206849 TGGTGATGCATAGCAACGAGA 59.793 47.619 0.00 0.00 43.62 4.04
3761 7564 1.863454 GGTGATGCATAGCAACGAGAG 59.137 52.381 0.00 0.00 43.62 3.20
3762 7565 1.863454 GTGATGCATAGCAACGAGAGG 59.137 52.381 0.00 0.00 43.62 3.69
3763 7566 1.202568 TGATGCATAGCAACGAGAGGG 60.203 52.381 0.00 0.00 43.62 4.30
3764 7567 0.107456 ATGCATAGCAACGAGAGGGG 59.893 55.000 0.00 0.00 43.62 4.79
3765 7568 0.975556 TGCATAGCAACGAGAGGGGA 60.976 55.000 0.00 0.00 34.76 4.81
3766 7569 0.249657 GCATAGCAACGAGAGGGGAG 60.250 60.000 0.00 0.00 0.00 4.30
3767 7570 1.403814 CATAGCAACGAGAGGGGAGA 58.596 55.000 0.00 0.00 0.00 3.71
3768 7571 1.339610 CATAGCAACGAGAGGGGAGAG 59.660 57.143 0.00 0.00 0.00 3.20
3769 7572 0.331954 TAGCAACGAGAGGGGAGAGT 59.668 55.000 0.00 0.00 0.00 3.24
3770 7573 1.216710 GCAACGAGAGGGGAGAGTG 59.783 63.158 0.00 0.00 0.00 3.51
3771 7574 1.536943 GCAACGAGAGGGGAGAGTGT 61.537 60.000 0.00 0.00 0.00 3.55
3772 7575 1.835494 CAACGAGAGGGGAGAGTGTA 58.165 55.000 0.00 0.00 0.00 2.90
3773 7576 1.746220 CAACGAGAGGGGAGAGTGTAG 59.254 57.143 0.00 0.00 0.00 2.74
3774 7577 0.993470 ACGAGAGGGGAGAGTGTAGT 59.007 55.000 0.00 0.00 0.00 2.73
3775 7578 1.065272 ACGAGAGGGGAGAGTGTAGTC 60.065 57.143 0.00 0.00 0.00 2.59
3776 7579 1.747898 CGAGAGGGGAGAGTGTAGTCC 60.748 61.905 0.00 0.00 0.00 3.85
3777 7580 1.285373 GAGAGGGGAGAGTGTAGTCCA 59.715 57.143 0.00 0.00 34.14 4.02
3778 7581 1.006162 AGAGGGGAGAGTGTAGTCCAC 59.994 57.143 0.00 0.00 44.89 4.02
3787 7590 0.449388 GTGTAGTCCACGTACCCTCG 59.551 60.000 0.00 0.00 33.61 4.63
3788 7591 0.036732 TGTAGTCCACGTACCCTCGT 59.963 55.000 0.00 0.00 45.10 4.18
3789 7592 1.277842 TGTAGTCCACGTACCCTCGTA 59.722 52.381 0.00 0.00 42.27 3.43
3790 7593 1.936547 GTAGTCCACGTACCCTCGTAG 59.063 57.143 0.00 0.00 42.27 3.51
3791 7594 0.615331 AGTCCACGTACCCTCGTAGA 59.385 55.000 0.00 0.00 42.27 2.59
3792 7595 0.729690 GTCCACGTACCCTCGTAGAC 59.270 60.000 0.00 2.79 42.50 2.59
3793 7596 0.392998 TCCACGTACCCTCGTAGACC 60.393 60.000 0.00 0.00 42.27 3.85
3794 7597 1.709147 CCACGTACCCTCGTAGACCG 61.709 65.000 0.00 0.00 42.27 4.79
3795 7598 1.021390 CACGTACCCTCGTAGACCGT 61.021 60.000 0.00 0.00 42.27 4.83
3796 7599 0.535335 ACGTACCCTCGTAGACCGTA 59.465 55.000 0.00 0.00 42.35 4.02
3797 7600 1.066430 ACGTACCCTCGTAGACCGTAA 60.066 52.381 0.00 0.00 42.35 3.18
3798 7601 1.594862 CGTACCCTCGTAGACCGTAAG 59.405 57.143 0.00 0.00 37.94 2.34
3799 7602 1.332065 GTACCCTCGTAGACCGTAAGC 59.668 57.143 0.00 0.00 37.94 3.09
3800 7603 1.354506 CCCTCGTAGACCGTAAGCG 59.645 63.158 0.00 0.00 37.94 4.68
3801 7604 1.298190 CCTCGTAGACCGTAAGCGC 60.298 63.158 0.00 0.00 37.94 5.92
3802 7605 1.426621 CTCGTAGACCGTAAGCGCA 59.573 57.895 11.47 0.00 37.94 6.09
3803 7606 0.179181 CTCGTAGACCGTAAGCGCAA 60.179 55.000 11.47 0.00 37.94 4.85
3804 7607 0.179181 TCGTAGACCGTAAGCGCAAG 60.179 55.000 11.47 0.00 37.94 4.01
3817 7620 2.897855 CGCAAGCGTTATGACAACG 58.102 52.632 6.25 5.22 45.56 4.10
3824 7627 0.785378 CGTTATGACAACGCGGTTGA 59.215 50.000 22.26 6.79 45.28 3.18
3825 7628 1.392168 CGTTATGACAACGCGGTTGAT 59.608 47.619 22.26 12.10 45.28 2.57
3826 7629 2.769376 GTTATGACAACGCGGTTGATG 58.231 47.619 22.26 11.18 45.28 3.07
3827 7630 2.087501 TATGACAACGCGGTTGATGT 57.912 45.000 22.26 13.84 45.28 3.06
3828 7631 2.087501 ATGACAACGCGGTTGATGTA 57.912 45.000 22.26 9.68 45.28 2.29
3829 7632 1.424403 TGACAACGCGGTTGATGTAG 58.576 50.000 22.26 1.41 45.28 2.74
3830 7633 1.269883 TGACAACGCGGTTGATGTAGT 60.270 47.619 22.26 4.69 45.28 2.73
3831 7634 1.389106 GACAACGCGGTTGATGTAGTC 59.611 52.381 22.26 10.01 45.28 2.59
3832 7635 0.365523 CAACGCGGTTGATGTAGTCG 59.634 55.000 12.47 0.00 45.28 4.18
3833 7636 0.038892 AACGCGGTTGATGTAGTCGT 60.039 50.000 12.47 0.00 0.00 4.34
3834 7637 0.804364 ACGCGGTTGATGTAGTCGTA 59.196 50.000 12.47 0.00 0.00 3.43
3835 7638 1.186030 CGCGGTTGATGTAGTCGTAC 58.814 55.000 0.00 0.00 0.00 3.67
3836 7639 1.186030 GCGGTTGATGTAGTCGTACG 58.814 55.000 9.53 9.53 30.95 3.67
3837 7640 1.466360 GCGGTTGATGTAGTCGTACGT 60.466 52.381 16.05 0.00 30.95 3.57
3838 7641 2.434761 CGGTTGATGTAGTCGTACGTC 58.565 52.381 16.05 10.06 43.16 4.34
3839 7642 2.094894 CGGTTGATGTAGTCGTACGTCT 59.905 50.000 18.54 18.54 43.23 4.18
3840 7643 3.425359 CGGTTGATGTAGTCGTACGTCTT 60.425 47.826 19.61 2.66 43.23 3.01
3841 7644 4.094212 GGTTGATGTAGTCGTACGTCTTC 58.906 47.826 19.61 15.02 43.23 2.87
3842 7645 4.378770 GGTTGATGTAGTCGTACGTCTTCA 60.379 45.833 19.61 19.79 43.23 3.02
3843 7646 4.332186 TGATGTAGTCGTACGTCTTCAC 57.668 45.455 19.61 13.19 43.23 3.18
3853 7656 4.379221 GTCTTCACGATCCGACCG 57.621 61.111 0.00 0.00 0.00 4.79
3854 7657 1.798735 GTCTTCACGATCCGACCGA 59.201 57.895 0.00 0.00 0.00 4.69
3855 7658 0.381089 GTCTTCACGATCCGACCGAT 59.619 55.000 0.00 0.00 0.00 4.18
3856 7659 0.661552 TCTTCACGATCCGACCGATC 59.338 55.000 0.00 0.00 43.58 3.69
3857 7660 0.317938 CTTCACGATCCGACCGATCC 60.318 60.000 0.00 0.00 44.07 3.36
3858 7661 0.750546 TTCACGATCCGACCGATCCT 60.751 55.000 0.00 0.00 44.07 3.24
3859 7662 0.107268 TCACGATCCGACCGATCCTA 59.893 55.000 0.00 0.00 44.07 2.94
3860 7663 0.517755 CACGATCCGACCGATCCTAG 59.482 60.000 0.00 0.00 44.07 3.02
3861 7664 0.108207 ACGATCCGACCGATCCTAGT 59.892 55.000 0.00 0.00 44.07 2.57
3862 7665 1.345741 ACGATCCGACCGATCCTAGTA 59.654 52.381 0.00 0.00 44.07 1.82
3863 7666 1.731160 CGATCCGACCGATCCTAGTAC 59.269 57.143 0.00 0.00 44.07 2.73
3864 7667 2.083002 GATCCGACCGATCCTAGTACC 58.917 57.143 0.00 0.00 41.51 3.34
3865 7668 0.250038 TCCGACCGATCCTAGTACCG 60.250 60.000 0.00 0.00 0.00 4.02
3866 7669 0.250038 CCGACCGATCCTAGTACCGA 60.250 60.000 0.00 0.00 0.00 4.69
3867 7670 1.586422 CGACCGATCCTAGTACCGAA 58.414 55.000 0.00 0.00 0.00 4.30
3868 7671 1.942657 CGACCGATCCTAGTACCGAAA 59.057 52.381 0.00 0.00 0.00 3.46
3869 7672 2.032204 CGACCGATCCTAGTACCGAAAG 60.032 54.545 0.00 0.00 0.00 2.62
3870 7673 2.948315 GACCGATCCTAGTACCGAAAGT 59.052 50.000 0.00 0.00 0.00 2.66
3871 7674 4.130118 GACCGATCCTAGTACCGAAAGTA 58.870 47.826 0.00 0.00 0.00 2.24
3880 7683 4.180496 CCGAAAGTACGGCACCTC 57.820 61.111 0.00 0.00 46.20 3.85
3881 7684 1.447314 CCGAAAGTACGGCACCTCC 60.447 63.158 0.00 0.00 46.20 4.30
3890 7693 2.512515 GGCACCTCCGTGATCTGC 60.513 66.667 0.00 0.00 43.14 4.26
3891 7694 2.887568 GCACCTCCGTGATCTGCG 60.888 66.667 0.00 0.00 43.14 5.18
3892 7695 2.887568 CACCTCCGTGATCTGCGC 60.888 66.667 0.00 0.00 43.14 6.09
3893 7696 3.381983 ACCTCCGTGATCTGCGCA 61.382 61.111 10.98 10.98 0.00 6.09
3894 7697 2.887568 CCTCCGTGATCTGCGCAC 60.888 66.667 5.66 0.00 0.00 5.34
3899 7702 3.549467 GTGATCTGCGCACGTTCA 58.451 55.556 5.66 10.94 0.00 3.18
3900 7703 1.417592 GTGATCTGCGCACGTTCAG 59.582 57.895 5.66 0.00 0.00 3.02
3901 7704 2.382746 TGATCTGCGCACGTTCAGC 61.383 57.895 5.66 2.66 0.00 4.26
3902 7705 2.047844 ATCTGCGCACGTTCAGCT 60.048 55.556 5.66 0.00 0.00 4.24
3903 7706 2.018582 GATCTGCGCACGTTCAGCTC 62.019 60.000 5.66 0.00 0.00 4.09
3904 7707 4.126390 CTGCGCACGTTCAGCTCG 62.126 66.667 5.66 0.00 0.00 5.03
3907 7710 3.767230 CGCACGTTCAGCTCGGTG 61.767 66.667 0.00 0.00 0.00 4.94
3908 7711 2.355837 GCACGTTCAGCTCGGTGA 60.356 61.111 7.04 0.00 0.00 4.02
3909 7712 2.658707 GCACGTTCAGCTCGGTGAC 61.659 63.158 0.00 0.00 0.00 3.67
3925 7728 2.049228 GTGACGTACCACAAACTCTCG 58.951 52.381 2.71 0.00 37.04 4.04
3926 7729 1.948834 TGACGTACCACAAACTCTCGA 59.051 47.619 0.00 0.00 0.00 4.04
3927 7730 2.555325 TGACGTACCACAAACTCTCGAT 59.445 45.455 0.00 0.00 0.00 3.59
3928 7731 3.169733 GACGTACCACAAACTCTCGATC 58.830 50.000 0.00 0.00 0.00 3.69
3929 7732 2.094854 ACGTACCACAAACTCTCGATCC 60.095 50.000 0.00 0.00 0.00 3.36
3930 7733 2.094906 CGTACCACAAACTCTCGATCCA 60.095 50.000 0.00 0.00 0.00 3.41
3931 7734 2.751166 ACCACAAACTCTCGATCCAG 57.249 50.000 0.00 0.00 0.00 3.86
3932 7735 1.338200 ACCACAAACTCTCGATCCAGC 60.338 52.381 0.00 0.00 0.00 4.85
3933 7736 1.066573 CCACAAACTCTCGATCCAGCT 60.067 52.381 0.00 0.00 0.00 4.24
3934 7737 1.998315 CACAAACTCTCGATCCAGCTG 59.002 52.381 6.78 6.78 0.00 4.24
3935 7738 1.895798 ACAAACTCTCGATCCAGCTGA 59.104 47.619 17.39 1.21 0.00 4.26
3936 7739 2.094286 ACAAACTCTCGATCCAGCTGAG 60.094 50.000 17.39 3.86 0.00 3.35
3937 7740 1.846007 AACTCTCGATCCAGCTGAGT 58.154 50.000 17.39 5.64 39.35 3.41
3938 7741 1.102154 ACTCTCGATCCAGCTGAGTG 58.898 55.000 17.39 7.56 36.74 3.51
3939 7742 1.102154 CTCTCGATCCAGCTGAGTGT 58.898 55.000 17.39 0.00 0.00 3.55
3940 7743 1.065401 CTCTCGATCCAGCTGAGTGTC 59.935 57.143 17.39 6.42 0.00 3.67
3941 7744 0.248417 CTCGATCCAGCTGAGTGTCG 60.248 60.000 17.39 17.65 0.00 4.35
3942 7745 0.676782 TCGATCCAGCTGAGTGTCGA 60.677 55.000 17.39 19.53 35.97 4.20
3943 7746 0.524392 CGATCCAGCTGAGTGTCGAC 60.524 60.000 17.39 9.11 0.00 4.20
3944 7747 0.524392 GATCCAGCTGAGTGTCGACG 60.524 60.000 17.39 0.00 0.00 5.12
3945 7748 1.938657 ATCCAGCTGAGTGTCGACGG 61.939 60.000 17.39 3.22 0.00 4.79
3946 7749 2.626780 CCAGCTGAGTGTCGACGGA 61.627 63.158 17.39 0.00 0.00 4.69
3947 7750 1.154131 CAGCTGAGTGTCGACGGAG 60.154 63.158 8.42 4.92 0.00 4.63
3948 7751 1.302591 AGCTGAGTGTCGACGGAGA 60.303 57.895 11.62 0.00 0.00 3.71
3949 7752 1.135731 GCTGAGTGTCGACGGAGAG 59.864 63.158 11.62 5.64 0.00 3.20
3950 7753 1.135731 CTGAGTGTCGACGGAGAGC 59.864 63.158 11.62 0.00 0.00 4.09
3951 7754 1.302383 CTGAGTGTCGACGGAGAGCT 61.302 60.000 11.62 1.90 0.00 4.09
3952 7755 0.889638 TGAGTGTCGACGGAGAGCTT 60.890 55.000 11.62 0.00 0.00 3.74
3953 7756 0.179184 GAGTGTCGACGGAGAGCTTC 60.179 60.000 11.62 0.00 0.00 3.86
3954 7757 0.889638 AGTGTCGACGGAGAGCTTCA 60.890 55.000 11.62 0.00 0.00 3.02
3955 7758 0.171455 GTGTCGACGGAGAGCTTCAT 59.829 55.000 11.62 0.00 0.00 2.57
3956 7759 0.452184 TGTCGACGGAGAGCTTCATC 59.548 55.000 11.62 0.00 0.00 2.92
3957 7760 0.452184 GTCGACGGAGAGCTTCATCA 59.548 55.000 0.00 0.00 0.00 3.07
3958 7761 0.735471 TCGACGGAGAGCTTCATCAG 59.265 55.000 0.00 0.00 0.00 2.90
3968 7771 1.706301 CTTCATCAGCACGACAGCG 59.294 57.895 0.00 0.00 44.79 5.18
3978 7781 4.559835 CGACAGCGTGATGACAGT 57.440 55.556 0.00 0.00 0.00 3.55
3979 7782 2.065193 CGACAGCGTGATGACAGTG 58.935 57.895 0.00 0.00 0.00 3.66
3980 7783 0.387239 CGACAGCGTGATGACAGTGA 60.387 55.000 0.00 0.00 0.00 3.41
3981 7784 1.733718 CGACAGCGTGATGACAGTGAT 60.734 52.381 0.00 0.00 0.00 3.06
3982 7785 1.657594 GACAGCGTGATGACAGTGATG 59.342 52.381 0.00 0.00 0.00 3.07
3983 7786 1.273327 ACAGCGTGATGACAGTGATGA 59.727 47.619 0.00 0.00 0.00 2.92
3984 7787 2.093816 ACAGCGTGATGACAGTGATGAT 60.094 45.455 0.00 0.00 0.00 2.45
3985 7788 2.284417 CAGCGTGATGACAGTGATGATG 59.716 50.000 0.00 0.00 0.00 3.07
3986 7789 2.167075 AGCGTGATGACAGTGATGATGA 59.833 45.455 0.00 0.00 0.00 2.92
3987 7790 2.931969 GCGTGATGACAGTGATGATGAA 59.068 45.455 0.00 0.00 0.00 2.57
3988 7791 3.001026 GCGTGATGACAGTGATGATGAAG 59.999 47.826 0.00 0.00 0.00 3.02
3989 7792 3.001026 CGTGATGACAGTGATGATGAAGC 59.999 47.826 0.00 0.00 0.00 3.86
3990 7793 4.190001 GTGATGACAGTGATGATGAAGCT 58.810 43.478 0.00 0.00 0.00 3.74
3991 7794 5.354767 GTGATGACAGTGATGATGAAGCTA 58.645 41.667 0.00 0.00 0.00 3.32
3992 7795 5.233902 GTGATGACAGTGATGATGAAGCTAC 59.766 44.000 0.00 0.00 0.00 3.58
3993 7796 5.128335 TGATGACAGTGATGATGAAGCTACT 59.872 40.000 0.00 0.00 0.00 2.57
3994 7797 4.752146 TGACAGTGATGATGAAGCTACTG 58.248 43.478 7.33 7.33 40.84 2.74
3995 7798 4.118410 GACAGTGATGATGAAGCTACTGG 58.882 47.826 12.35 0.00 39.71 4.00
3996 7799 2.871022 CAGTGATGATGAAGCTACTGGC 59.129 50.000 1.76 0.00 42.19 4.85
4005 7808 4.785453 GCTACTGGCGCAGGGCTT 62.785 66.667 10.83 0.00 42.94 4.35
4006 7809 2.512515 CTACTGGCGCAGGGCTTC 60.513 66.667 10.83 0.00 42.94 3.86
4007 7810 4.451150 TACTGGCGCAGGGCTTCG 62.451 66.667 10.83 0.90 42.94 3.79
4022 7825 1.641577 CTTCGCCTAAGCACTACCAC 58.358 55.000 0.00 0.00 39.83 4.16
4023 7826 0.108992 TTCGCCTAAGCACTACCACG 60.109 55.000 0.00 0.00 39.83 4.94
4024 7827 0.961857 TCGCCTAAGCACTACCACGA 60.962 55.000 0.00 0.00 39.83 4.35
4025 7828 0.102481 CGCCTAAGCACTACCACGAT 59.898 55.000 0.00 0.00 39.83 3.73
4026 7829 1.335810 CGCCTAAGCACTACCACGATA 59.664 52.381 0.00 0.00 39.83 2.92
4027 7830 2.030185 CGCCTAAGCACTACCACGATAT 60.030 50.000 0.00 0.00 39.83 1.63
4028 7831 3.318017 GCCTAAGCACTACCACGATATG 58.682 50.000 0.00 0.00 39.53 1.78
4029 7832 3.005472 GCCTAAGCACTACCACGATATGA 59.995 47.826 0.00 0.00 39.53 2.15
4030 7833 4.547532 CCTAAGCACTACCACGATATGAC 58.452 47.826 0.00 0.00 0.00 3.06
4031 7834 3.454371 AAGCACTACCACGATATGACC 57.546 47.619 0.00 0.00 0.00 4.02
4032 7835 1.337071 AGCACTACCACGATATGACCG 59.663 52.381 0.00 0.00 0.00 4.79
4033 7836 1.335810 GCACTACCACGATATGACCGA 59.664 52.381 0.00 0.00 0.00 4.69
4034 7837 2.604855 GCACTACCACGATATGACCGAG 60.605 54.545 0.00 0.00 0.00 4.63
4035 7838 2.031069 CACTACCACGATATGACCGAGG 60.031 54.545 0.00 0.00 42.18 4.63
4036 7839 3.202548 ACCACGATATGACCGAGGT 57.797 52.632 0.00 0.00 44.02 3.85
4037 7840 0.744874 ACCACGATATGACCGAGGTG 59.255 55.000 0.00 0.00 46.26 4.00
4038 7841 0.032130 CCACGATATGACCGAGGTGG 59.968 60.000 0.00 0.00 46.41 4.61
4039 7842 1.029681 CACGATATGACCGAGGTGGA 58.970 55.000 0.00 0.00 42.00 4.02
4040 7843 1.030457 ACGATATGACCGAGGTGGAC 58.970 55.000 0.00 0.00 42.00 4.02
4041 7844 1.319541 CGATATGACCGAGGTGGACT 58.680 55.000 0.00 0.00 42.00 3.85
4042 7845 2.158711 ACGATATGACCGAGGTGGACTA 60.159 50.000 0.00 0.00 42.00 2.59
4043 7846 3.082548 CGATATGACCGAGGTGGACTAT 58.917 50.000 0.00 0.00 42.00 2.12
4044 7847 3.119814 CGATATGACCGAGGTGGACTATG 60.120 52.174 0.00 0.00 42.00 2.23
4045 7848 1.414158 ATGACCGAGGTGGACTATGG 58.586 55.000 0.00 0.00 42.00 2.74
4046 7849 0.040646 TGACCGAGGTGGACTATGGT 59.959 55.000 0.00 0.00 42.00 3.55
4047 7850 0.460311 GACCGAGGTGGACTATGGTG 59.540 60.000 0.00 0.00 42.00 4.17
4048 7851 0.976073 ACCGAGGTGGACTATGGTGG 60.976 60.000 0.00 0.00 42.00 4.61
4049 7852 0.686441 CCGAGGTGGACTATGGTGGA 60.686 60.000 0.00 0.00 42.00 4.02
4050 7853 0.747255 CGAGGTGGACTATGGTGGAG 59.253 60.000 0.00 0.00 0.00 3.86
4051 7854 1.123928 GAGGTGGACTATGGTGGAGG 58.876 60.000 0.00 0.00 0.00 4.30
4052 7855 0.326618 AGGTGGACTATGGTGGAGGG 60.327 60.000 0.00 0.00 0.00 4.30
4053 7856 1.345715 GGTGGACTATGGTGGAGGGG 61.346 65.000 0.00 0.00 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
343 344 2.559698 TCTTGAATTGGTCGGAAGCA 57.440 45.000 0.00 0.00 0.00 3.91
1001 1006 4.872691 GCACTCTCTGCTGAAGCTTTAATA 59.127 41.667 0.00 0.00 43.33 0.98
1004 1009 2.693069 GCACTCTCTGCTGAAGCTTTA 58.307 47.619 0.00 0.00 43.33 1.85
1079 1084 4.331968 TGGCCGATGACTTTTCATAGTTT 58.668 39.130 0.00 0.00 42.95 2.66
1088 1093 2.423538 GCTAAACATGGCCGATGACTTT 59.576 45.455 18.41 12.62 35.80 2.66
1094 1099 3.006323 TGTTTTTGCTAAACATGGCCGAT 59.994 39.130 11.89 0.00 35.45 4.18
1127 1132 3.418684 TTTAGCACCTCCCTCTTGTTC 57.581 47.619 0.00 0.00 0.00 3.18
1129 1134 3.200165 GGTATTTAGCACCTCCCTCTTGT 59.800 47.826 0.00 0.00 32.98 3.16
1130 1135 3.433740 GGGTATTTAGCACCTCCCTCTTG 60.434 52.174 0.00 0.00 36.25 3.02
1142 1147 6.203723 CAGCTCTAATGTTGAGGGTATTTAGC 59.796 42.308 0.00 0.00 32.57 3.09
1148 1153 4.383118 GCTTCAGCTCTAATGTTGAGGGTA 60.383 45.833 0.00 0.00 38.21 3.69
1157 1162 2.559440 GACCTGGCTTCAGCTCTAATG 58.441 52.381 0.00 0.00 41.70 1.90
1161 1166 2.654079 CGGACCTGGCTTCAGCTCT 61.654 63.158 0.00 0.00 41.70 4.09
1187 1192 1.273838 ACATAGACAGGGAGGCCAAGA 60.274 52.381 5.01 0.00 0.00 3.02
1188 1193 1.134280 CACATAGACAGGGAGGCCAAG 60.134 57.143 5.01 0.00 0.00 3.61
1190 1195 0.982852 CCACATAGACAGGGAGGCCA 60.983 60.000 5.01 0.00 0.00 5.36
1196 1201 0.107017 CTTGCCCCACATAGACAGGG 60.107 60.000 0.00 0.00 42.94 4.45
1245 1250 9.647918 ACCTTGTATTCTCTGTCAGATTCTATA 57.352 33.333 2.22 0.00 0.00 1.31
1256 1261 3.560025 CCTGCCAACCTTGTATTCTCTGT 60.560 47.826 0.00 0.00 0.00 3.41
1301 1306 6.875195 CACATGCTTTAATGGGAATGTCTTTT 59.125 34.615 0.00 0.00 32.30 2.27
1304 1309 4.142093 GCACATGCTTTAATGGGAATGTCT 60.142 41.667 0.00 0.00 32.30 3.41
1308 1313 3.514706 TGTGCACATGCTTTAATGGGAAT 59.485 39.130 17.42 0.00 42.66 3.01
1312 1317 2.669434 GCTTGTGCACATGCTTTAATGG 59.331 45.455 36.95 13.84 41.90 3.16
1358 1363 6.697019 CACATAAGGTTTTGGTCAAGTCAAAG 59.303 38.462 0.00 0.00 35.81 2.77
1400 1405 1.207329 GCCCACTAGAACCGACAGATT 59.793 52.381 0.00 0.00 0.00 2.40
1403 1408 0.320374 TTGCCCACTAGAACCGACAG 59.680 55.000 0.00 0.00 0.00 3.51
1409 1414 2.858745 TCCTGTTTTGCCCACTAGAAC 58.141 47.619 0.00 0.00 0.00 3.01
1436 1441 4.338118 CCCAACTTAACCAATGCATCGTAT 59.662 41.667 0.00 0.00 0.00 3.06
1437 1442 3.692101 CCCAACTTAACCAATGCATCGTA 59.308 43.478 0.00 0.00 0.00 3.43
1455 1462 1.903877 GCCTAGTCAGCAGCTCCCAA 61.904 60.000 0.00 0.00 0.00 4.12
1472 1479 1.147153 CCTCCATCCTTCTTCGGCC 59.853 63.158 0.00 0.00 0.00 6.13
1476 1483 1.423161 CCCATCCCTCCATCCTTCTTC 59.577 57.143 0.00 0.00 0.00 2.87
1497 1504 2.423926 AGCTGTATATGTCGCGGAAG 57.576 50.000 6.13 0.00 0.00 3.46
1503 1510 4.373717 GCGACGTTAAAGCTGTATATGTCG 60.374 45.833 22.87 22.87 46.60 4.35
1512 1519 1.927174 AGCATAGCGACGTTAAAGCTG 59.073 47.619 16.96 4.08 41.80 4.24
1513 1520 1.927174 CAGCATAGCGACGTTAAAGCT 59.073 47.619 13.55 13.55 44.24 3.74
1515 1522 1.004927 GCCAGCATAGCGACGTTAAAG 60.005 52.381 0.00 0.00 0.00 1.85
1518 1525 1.227147 GGCCAGCATAGCGACGTTA 60.227 57.895 0.00 0.00 0.00 3.18
1521 1528 2.963854 CTGGCCAGCATAGCGACG 60.964 66.667 22.33 0.00 0.00 5.12
1524 1531 1.434622 CTTGTCTGGCCAGCATAGCG 61.435 60.000 28.91 9.80 0.00 4.26
1566 1573 1.069765 CCTGGCACACAACGAGTCT 59.930 57.895 0.00 0.00 0.00 3.24
1614 1621 1.523258 CTCCGCCTCCAGAATGCTG 60.523 63.158 0.00 0.00 41.93 4.41
1647 1654 5.821516 GGATACTCCTCCATGTATACGAG 57.178 47.826 0.00 0.41 35.24 4.18
1665 1672 0.756903 GCTCCACGCCCTTTAGGATA 59.243 55.000 0.00 0.00 38.24 2.59
1669 1676 2.158957 TCATTAGCTCCACGCCCTTTAG 60.159 50.000 0.00 0.00 40.39 1.85
1699 1707 4.701765 CCATCTCCCACTCTGTAAATCAG 58.298 47.826 0.00 0.00 44.85 2.90
1700 1708 3.118261 GCCATCTCCCACTCTGTAAATCA 60.118 47.826 0.00 0.00 0.00 2.57
1701 1709 3.118261 TGCCATCTCCCACTCTGTAAATC 60.118 47.826 0.00 0.00 0.00 2.17
1702 1710 2.846206 TGCCATCTCCCACTCTGTAAAT 59.154 45.455 0.00 0.00 0.00 1.40
1703 1711 2.237143 CTGCCATCTCCCACTCTGTAAA 59.763 50.000 0.00 0.00 0.00 2.01
1704 1712 1.833630 CTGCCATCTCCCACTCTGTAA 59.166 52.381 0.00 0.00 0.00 2.41
1705 1713 1.489481 CTGCCATCTCCCACTCTGTA 58.511 55.000 0.00 0.00 0.00 2.74
1706 1714 1.908340 GCTGCCATCTCCCACTCTGT 61.908 60.000 0.00 0.00 0.00 3.41
1707 1715 1.153208 GCTGCCATCTCCCACTCTG 60.153 63.158 0.00 0.00 0.00 3.35
1734 1742 1.378514 CCAGGGGTCCGACCAAATG 60.379 63.158 19.43 13.11 41.02 2.32
1737 1745 4.974438 AGCCAGGGGTCCGACCAA 62.974 66.667 19.43 0.00 41.02 3.67
1741 1749 3.319198 GTTCAGCCAGGGGTCCGA 61.319 66.667 0.00 0.00 0.00 4.55
1755 1763 1.730612 GTTCGAATTCCCTCACGGTTC 59.269 52.381 0.00 0.00 0.00 3.62
1768 1776 0.546598 GGTGATCTGGGGGTTCGAAT 59.453 55.000 0.00 0.00 0.00 3.34
1769 1777 0.838554 TGGTGATCTGGGGGTTCGAA 60.839 55.000 0.00 0.00 0.00 3.71
1776 1784 2.087248 ACCCTTTGGTGATCTGGGG 58.913 57.895 0.00 0.00 45.58 4.96
1794 1802 6.978659 CGATAGCTTTGGTGAGAATACAGTTA 59.021 38.462 0.00 0.00 0.00 2.24
1803 1811 2.586258 GCTCGATAGCTTTGGTGAGA 57.414 50.000 0.00 0.00 45.85 3.27
1827 1835 2.446994 TCGTGGGTGGTTGGGTCT 60.447 61.111 0.00 0.00 0.00 3.85
1830 1838 2.281484 CACTCGTGGGTGGTTGGG 60.281 66.667 0.00 0.00 33.95 4.12
1851 1859 1.550976 AGGCTCTTTACCAACTCCTCG 59.449 52.381 0.00 0.00 0.00 4.63
1863 1871 1.494721 TCCTCCACAAACAGGCTCTTT 59.505 47.619 0.00 0.00 0.00 2.52
1899 1907 1.079127 CCGGACCAGTGTTGCTAGG 60.079 63.158 0.00 0.00 0.00 3.02
1902 1910 2.847234 TCCCGGACCAGTGTTGCT 60.847 61.111 0.73 0.00 0.00 3.91
1905 1913 0.840722 AATCCTCCCGGACCAGTGTT 60.841 55.000 0.73 0.00 43.51 3.32
1910 1918 0.618458 CTCAAAATCCTCCCGGACCA 59.382 55.000 0.73 0.00 43.51 4.02
1912 1920 0.909623 TCCTCAAAATCCTCCCGGAC 59.090 55.000 0.73 0.00 43.51 4.79
1948 1956 0.899720 AATTGGCCCTTGCTGTCATG 59.100 50.000 0.00 0.00 37.74 3.07
1965 1973 4.832248 TGTAGGCTGACTTCATCGAAAAT 58.168 39.130 0.00 0.00 0.00 1.82
1972 1980 2.836981 AGAGCTTGTAGGCTGACTTCAT 59.163 45.455 0.00 0.00 43.20 2.57
1977 1985 1.473278 ACGTAGAGCTTGTAGGCTGAC 59.527 52.381 0.00 0.00 43.20 3.51
1989 1997 2.281517 TCTCTCTGTAGCACGTAGAGC 58.718 52.381 7.32 0.00 46.67 4.09
2012 2020 3.014085 GCGGGTCCTGGTCGATCAA 62.014 63.158 0.00 0.00 0.00 2.57
2013 2021 3.458163 GCGGGTCCTGGTCGATCA 61.458 66.667 0.00 0.00 0.00 2.92
2015 2023 3.461773 CAGCGGGTCCTGGTCGAT 61.462 66.667 0.00 2.36 0.00 3.59
2019 2027 3.637273 GGTTCAGCGGGTCCTGGT 61.637 66.667 0.00 0.00 33.64 4.00
2034 2042 1.153046 CCAACCCGCCGATATTGGT 60.153 57.895 10.85 0.00 37.42 3.67
2038 2046 1.764854 ACTCCCAACCCGCCGATAT 60.765 57.895 0.00 0.00 0.00 1.63
2039 2047 2.364579 ACTCCCAACCCGCCGATA 60.365 61.111 0.00 0.00 0.00 2.92
2043 2051 3.920093 CTTCCACTCCCAACCCGCC 62.920 68.421 0.00 0.00 0.00 6.13
2044 2052 2.359975 CTTCCACTCCCAACCCGC 60.360 66.667 0.00 0.00 0.00 6.13
2046 2054 0.840722 TCTCCTTCCACTCCCAACCC 60.841 60.000 0.00 0.00 0.00 4.11
2104 2112 0.326595 TTGTGAGGAAGCCGCCATAA 59.673 50.000 0.00 0.00 0.00 1.90
2106 2114 0.546122 TATTGTGAGGAAGCCGCCAT 59.454 50.000 0.00 0.00 0.00 4.40
2116 2124 3.300388 TCAGAGGTAGGCTATTGTGAGG 58.700 50.000 0.00 0.00 0.00 3.86
2121 2129 5.344743 TCAGTTTCAGAGGTAGGCTATTG 57.655 43.478 0.00 0.00 0.00 1.90
2128 2136 6.483307 TGTTTGATGTTCAGTTTCAGAGGTAG 59.517 38.462 0.00 0.00 0.00 3.18
2133 2141 4.035091 CGGTGTTTGATGTTCAGTTTCAGA 59.965 41.667 0.00 0.00 0.00 3.27
2136 2144 4.035017 CACGGTGTTTGATGTTCAGTTTC 58.965 43.478 0.00 0.00 0.00 2.78
2153 2161 3.945285 GGTATCACATTCAATTCCACGGT 59.055 43.478 0.00 0.00 0.00 4.83
2154 2162 3.315191 GGGTATCACATTCAATTCCACGG 59.685 47.826 0.00 0.00 0.00 4.94
2172 2180 0.896479 TACAGCACACGCAGAGGGTA 60.896 55.000 0.00 0.00 42.27 3.69
2181 2189 0.109086 CCAGTCTCCTACAGCACACG 60.109 60.000 0.00 0.00 0.00 4.49
2199 2207 2.815211 TGCGCTGCATCTTCGTCC 60.815 61.111 9.73 0.00 31.71 4.79
2228 2236 3.376546 CACCTTCCTTAGAAGCTTGCATC 59.623 47.826 2.10 0.00 46.97 3.91
2239 2247 0.320374 TCGCACCACACCTTCCTTAG 59.680 55.000 0.00 0.00 0.00 2.18
2241 2249 1.071471 CTCGCACCACACCTTCCTT 59.929 57.895 0.00 0.00 0.00 3.36
2243 2251 1.021390 CATCTCGCACCACACCTTCC 61.021 60.000 0.00 0.00 0.00 3.46
2266 2274 1.544825 TTCTGGCGGGTCTCTTCCAG 61.545 60.000 0.92 0.92 45.59 3.86
2313 2321 2.867429 CGAAGGGTTTCATGCATCAAC 58.133 47.619 0.00 2.74 32.67 3.18
2353 2361 1.148273 GAGGCATGCAACCCGGATA 59.852 57.895 21.36 0.00 0.00 2.59
2387 2395 3.616317 GCATTTATTTTGTTCCGCCAGGT 60.616 43.478 0.00 0.00 39.05 4.00
2398 2406 3.613737 CCTTGTCGCCTGCATTTATTTTG 59.386 43.478 0.00 0.00 0.00 2.44
2420 2428 0.897401 AGCTTTTCCAAGGCTGAGGC 60.897 55.000 0.00 0.00 34.82 4.70
2440 2448 4.467769 CCCAATGATTAATCTCTGCTGGT 58.532 43.478 16.24 0.00 0.00 4.00
2464 2472 2.301346 CACAAGGCCAAAGACTCAAGT 58.699 47.619 5.01 0.00 0.00 3.16
2473 2481 0.817634 CCTGTCGACACAAGGCCAAA 60.818 55.000 15.76 0.00 29.82 3.28
2480 2488 0.596600 GTTCGCTCCTGTCGACACAA 60.597 55.000 15.76 4.47 35.51 3.33
2490 2498 1.185618 TGGCTGTGTAGTTCGCTCCT 61.186 55.000 0.00 0.00 0.00 3.69
2503 2511 3.320879 CTGCATCGGGACTGGCTGT 62.321 63.158 0.00 0.00 0.00 4.40
2505 2513 4.479993 GCTGCATCGGGACTGGCT 62.480 66.667 0.00 0.00 0.00 4.75
2534 2542 2.232208 CAGCAAATCTCCCTTGGGTTTC 59.768 50.000 5.51 0.00 0.00 2.78
2535 2543 2.158325 TCAGCAAATCTCCCTTGGGTTT 60.158 45.455 5.51 0.00 0.00 3.27
2536 2544 1.428912 TCAGCAAATCTCCCTTGGGTT 59.571 47.619 5.51 0.00 0.00 4.11
2541 2549 4.581309 TGATCTTCAGCAAATCTCCCTT 57.419 40.909 0.00 0.00 0.00 3.95
2552 2560 3.603532 TCCATCACAGTTGATCTTCAGC 58.396 45.455 0.00 0.00 40.79 4.26
2561 2569 4.860907 GCATTAAAAGCTCCATCACAGTTG 59.139 41.667 0.00 0.00 0.00 3.16
2590 2598 3.728373 CCCAGCCACCAGTACCCC 61.728 72.222 0.00 0.00 0.00 4.95
2621 2629 0.687427 TGACATCTCCCGCCTCATCA 60.687 55.000 0.00 0.00 0.00 3.07
2624 2632 1.000359 TCTGACATCTCCCGCCTCA 60.000 57.895 0.00 0.00 0.00 3.86
2653 2661 2.552155 GCAACATGGTACAGGAACCTCA 60.552 50.000 0.00 0.00 46.40 3.86
2655 2663 1.610624 CGCAACATGGTACAGGAACCT 60.611 52.381 0.00 0.00 46.40 3.50
2664 2672 0.034756 AGCACTGTCGCAACATGGTA 59.965 50.000 0.00 0.00 34.13 3.25
2666 2674 1.208358 CAGCACTGTCGCAACATGG 59.792 57.895 0.00 0.00 34.13 3.66
2726 2734 1.078426 CGTCATTCCCCAGTCCACC 60.078 63.158 0.00 0.00 0.00 4.61
2728 2736 2.668632 GCGTCATTCCCCAGTCCA 59.331 61.111 0.00 0.00 0.00 4.02
2731 2739 1.966901 TATGCGCGTCATTCCCCAGT 61.967 55.000 18.48 0.00 36.63 4.00
2759 2767 1.308998 CAAGAACTTGGCTGTCCGTT 58.691 50.000 6.66 0.00 36.95 4.44
2786 2794 5.759273 CAGGTCAGAATCTCTTCCATTCATC 59.241 44.000 0.00 0.00 33.34 2.92
2787 2795 5.397672 CCAGGTCAGAATCTCTTCCATTCAT 60.398 44.000 0.00 0.00 33.34 2.57
2795 2803 3.390639 CCATAGCCAGGTCAGAATCTCTT 59.609 47.826 0.00 0.00 0.00 2.85
2801 2809 1.500474 CCTCCATAGCCAGGTCAGAA 58.500 55.000 0.00 0.00 0.00 3.02
2808 2816 0.769873 AAGATGCCCTCCATAGCCAG 59.230 55.000 0.00 0.00 33.29 4.85
2826 2834 1.266178 TGGCGGATCTCTCTGAACAA 58.734 50.000 0.00 0.00 0.00 2.83
2852 2860 5.523552 TGATATGTGACTAAAGTTCATGCGG 59.476 40.000 10.10 0.00 0.00 5.69
2917 2925 0.171903 AGCGCCAAAAGCAGCAATAG 59.828 50.000 2.29 0.00 44.04 1.73
2919 2927 1.080298 GAGCGCCAAAAGCAGCAAT 60.080 52.632 2.29 0.00 44.04 3.56
2964 2972 2.579738 GTCGGGGAGAGCCTCAAC 59.420 66.667 0.00 0.00 32.51 3.18
2978 2986 1.474017 GTCCAACGGATACATCGTCG 58.526 55.000 0.00 0.00 40.18 5.12
3007 3015 1.706995 TTACCCGGTTCCAGCACCAA 61.707 55.000 0.00 0.00 36.49 3.67
3010 3018 1.029947 CCATTACCCGGTTCCAGCAC 61.030 60.000 0.00 0.00 0.00 4.40
3018 3026 2.038033 CGATTCCATACCATTACCCGGT 59.962 50.000 0.00 0.00 40.73 5.28
3060 3068 6.515272 TCTTTGTCTAAAATGGAGGAATGC 57.485 37.500 0.00 0.00 0.00 3.56
3061 3069 9.196552 GTTTTCTTTGTCTAAAATGGAGGAATG 57.803 33.333 0.00 0.00 0.00 2.67
3062 3070 9.147732 AGTTTTCTTTGTCTAAAATGGAGGAAT 57.852 29.630 0.00 0.00 0.00 3.01
3063 3071 8.533569 AGTTTTCTTTGTCTAAAATGGAGGAA 57.466 30.769 0.00 0.00 0.00 3.36
3064 3072 8.413229 CAAGTTTTCTTTGTCTAAAATGGAGGA 58.587 33.333 0.00 0.00 38.17 3.71
3082 3090 9.952341 GTTCTCAACAAAACATAACAAGTTTTC 57.048 29.630 0.00 0.00 44.72 2.29
3083 3091 9.705290 AGTTCTCAACAAAACATAACAAGTTTT 57.295 25.926 0.00 0.00 46.74 2.43
3095 3103 2.952310 AGCCCTGAGTTCTCAACAAAAC 59.048 45.455 4.09 0.00 0.00 2.43
3131 3139 2.697431 TTCATTGCACACGGCTTAAC 57.303 45.000 0.00 0.00 45.15 2.01
3143 3151 4.738740 GCACATCTAAGCATCTTTCATTGC 59.261 41.667 0.00 0.00 39.17 3.56
3147 3155 7.049754 TCATAAGCACATCTAAGCATCTTTCA 58.950 34.615 0.00 0.00 0.00 2.69
3198 3206 8.498054 AGAATATGCGCTATACAAATAAGCAT 57.502 30.769 9.73 5.38 41.24 3.79
3229 3237 3.027412 TGCTCCTGTAGAAGAGATGTCC 58.973 50.000 0.00 0.00 31.43 4.02
3271 3279 3.094294 GCTCGCAAAACTCGATCAATTC 58.906 45.455 0.00 0.00 35.25 2.17
3279 3287 1.322936 GAGAGATGCTCGCAAAACTCG 59.677 52.381 13.77 0.00 35.36 4.18
3303 3311 5.789643 AGACAATGTAAAATGCAAGGTGT 57.210 34.783 0.00 0.00 0.00 4.16
3306 3314 7.250569 ACGATAAGACAATGTAAAATGCAAGG 58.749 34.615 0.00 0.00 0.00 3.61
3321 3329 7.156000 TGTCTATTTCACCAAACGATAAGACA 58.844 34.615 0.00 0.00 0.00 3.41
3330 6803 9.827411 GTTTCTCTAATGTCTATTTCACCAAAC 57.173 33.333 0.00 0.00 0.00 2.93
3366 6839 5.826737 ACTTTCCAGGCAATCATCTTATCTG 59.173 40.000 0.00 0.00 0.00 2.90
3382 6855 4.887748 ACACTCACTACATGACTTTCCAG 58.112 43.478 0.00 0.00 32.37 3.86
3448 6921 0.895530 TGGAGGAAGTACTTCGCTGG 59.104 55.000 25.44 0.00 40.37 4.85
3449 6922 2.028930 AGTTGGAGGAAGTACTTCGCTG 60.029 50.000 25.44 0.00 40.37 5.18
3503 6976 3.682858 TCTCAAAAGGGAAATTACTCGCG 59.317 43.478 0.00 0.00 33.67 5.87
3505 6978 6.091441 CACTCTCTCAAAAGGGAAATTACTCG 59.909 42.308 0.00 0.00 29.38 4.18
3515 6988 4.252073 CAGTCATCACTCTCTCAAAAGGG 58.748 47.826 0.00 0.00 0.00 3.95
3516 6989 4.252073 CCAGTCATCACTCTCTCAAAAGG 58.748 47.826 0.00 0.00 0.00 3.11
3626 7429 1.009060 TGGAGATGCCCTTACCCTACA 59.991 52.381 0.00 0.00 34.97 2.74
3650 7453 1.062525 GGTTTAAGGATGCGCTGCG 59.937 57.895 19.17 19.17 0.00 5.18
3651 7454 1.062525 CGGTTTAAGGATGCGCTGC 59.937 57.895 9.73 0.00 0.00 5.25
3652 7455 1.062525 GCGGTTTAAGGATGCGCTG 59.937 57.895 9.73 0.00 0.00 5.18
3653 7456 2.112815 GGCGGTTTAAGGATGCGCT 61.113 57.895 9.73 0.00 0.00 5.92
3663 7466 1.962306 GTCGGTTGCAGGCGGTTTA 60.962 57.895 0.00 0.00 0.00 2.01
3668 7471 2.741985 TCATGTCGGTTGCAGGCG 60.742 61.111 0.00 0.00 0.00 5.52
3680 7483 2.306847 GTTTCCCAACAGTGGTCATGT 58.693 47.619 0.00 0.00 44.30 3.21
3690 7493 1.606903 AATTACCGCGTTTCCCAACA 58.393 45.000 4.92 0.00 32.54 3.33
3691 7494 2.030981 TGAAATTACCGCGTTTCCCAAC 60.031 45.455 14.86 0.00 34.29 3.77
3692 7495 2.228059 TGAAATTACCGCGTTTCCCAA 58.772 42.857 14.86 0.00 34.29 4.12
3693 7496 1.893544 TGAAATTACCGCGTTTCCCA 58.106 45.000 14.86 0.00 34.29 4.37
3694 7497 2.993449 TTGAAATTACCGCGTTTCCC 57.007 45.000 14.86 0.00 34.29 3.97
3713 7516 2.325509 GCGTGTGCGTAGGAATTTTT 57.674 45.000 0.00 0.00 40.81 1.94
3725 7528 0.179181 CACCATGATCTTGCGTGTGC 60.179 55.000 15.81 0.00 43.20 4.57
3726 7529 1.441738 TCACCATGATCTTGCGTGTG 58.558 50.000 19.89 14.96 0.00 3.82
3727 7530 2.011947 CATCACCATGATCTTGCGTGT 58.988 47.619 19.89 6.63 34.28 4.49
3728 7531 1.268386 GCATCACCATGATCTTGCGTG 60.268 52.381 17.02 17.02 34.28 5.34
3729 7532 1.019673 GCATCACCATGATCTTGCGT 58.980 50.000 3.07 0.87 34.28 5.24
3730 7533 1.018910 TGCATCACCATGATCTTGCG 58.981 50.000 3.07 0.30 34.28 4.85
3731 7534 3.366070 GCTATGCATCACCATGATCTTGC 60.366 47.826 0.19 0.00 34.28 4.01
3732 7535 3.818773 TGCTATGCATCACCATGATCTTG 59.181 43.478 0.19 1.60 34.28 3.02
3733 7536 4.094830 TGCTATGCATCACCATGATCTT 57.905 40.909 0.19 0.00 34.28 2.40
3734 7537 3.782656 TGCTATGCATCACCATGATCT 57.217 42.857 0.19 0.00 34.28 2.75
3735 7538 3.364664 CGTTGCTATGCATCACCATGATC 60.365 47.826 0.19 0.00 38.76 2.92
3736 7539 2.551032 CGTTGCTATGCATCACCATGAT 59.449 45.455 0.19 0.00 38.76 2.45
3737 7540 1.941975 CGTTGCTATGCATCACCATGA 59.058 47.619 0.19 0.00 38.76 3.07
3738 7541 1.941975 TCGTTGCTATGCATCACCATG 59.058 47.619 0.19 0.00 38.76 3.66
3739 7542 2.158914 TCTCGTTGCTATGCATCACCAT 60.159 45.455 0.19 0.00 38.76 3.55
3740 7543 1.206849 TCTCGTTGCTATGCATCACCA 59.793 47.619 0.19 0.00 38.76 4.17
3741 7544 1.863454 CTCTCGTTGCTATGCATCACC 59.137 52.381 0.19 0.00 38.76 4.02
3742 7545 1.863454 CCTCTCGTTGCTATGCATCAC 59.137 52.381 0.19 0.00 38.76 3.06
3743 7546 1.202568 CCCTCTCGTTGCTATGCATCA 60.203 52.381 0.19 0.00 38.76 3.07
3744 7547 1.506493 CCCTCTCGTTGCTATGCATC 58.494 55.000 0.19 0.00 38.76 3.91
3745 7548 0.107456 CCCCTCTCGTTGCTATGCAT 59.893 55.000 3.79 3.79 38.76 3.96
3746 7549 0.975556 TCCCCTCTCGTTGCTATGCA 60.976 55.000 0.00 0.00 36.47 3.96
3747 7550 0.249657 CTCCCCTCTCGTTGCTATGC 60.250 60.000 0.00 0.00 0.00 3.14
3748 7551 1.339610 CTCTCCCCTCTCGTTGCTATG 59.660 57.143 0.00 0.00 0.00 2.23
3749 7552 1.063567 ACTCTCCCCTCTCGTTGCTAT 60.064 52.381 0.00 0.00 0.00 2.97
3750 7553 0.331954 ACTCTCCCCTCTCGTTGCTA 59.668 55.000 0.00 0.00 0.00 3.49
3751 7554 1.077625 ACTCTCCCCTCTCGTTGCT 59.922 57.895 0.00 0.00 0.00 3.91
3752 7555 1.216710 CACTCTCCCCTCTCGTTGC 59.783 63.158 0.00 0.00 0.00 4.17
3753 7556 1.746220 CTACACTCTCCCCTCTCGTTG 59.254 57.143 0.00 0.00 0.00 4.10
3754 7557 1.355043 ACTACACTCTCCCCTCTCGTT 59.645 52.381 0.00 0.00 0.00 3.85
3755 7558 0.993470 ACTACACTCTCCCCTCTCGT 59.007 55.000 0.00 0.00 0.00 4.18
3756 7559 1.670791 GACTACACTCTCCCCTCTCG 58.329 60.000 0.00 0.00 0.00 4.04
3757 7560 1.285373 TGGACTACACTCTCCCCTCTC 59.715 57.143 0.00 0.00 0.00 3.20
3758 7561 1.006162 GTGGACTACACTCTCCCCTCT 59.994 57.143 0.00 0.00 46.72 3.69
3759 7562 1.476477 GTGGACTACACTCTCCCCTC 58.524 60.000 0.00 0.00 46.72 4.30
3760 7563 3.693810 GTGGACTACACTCTCCCCT 57.306 57.895 0.00 0.00 46.72 4.79
3768 7571 0.449388 CGAGGGTACGTGGACTACAC 59.551 60.000 0.00 0.00 46.78 2.90
3769 7572 0.036732 ACGAGGGTACGTGGACTACA 59.963 55.000 0.00 0.00 44.84 2.74
3770 7573 1.936547 CTACGAGGGTACGTGGACTAC 59.063 57.143 0.00 0.00 44.98 2.73
3771 7574 1.831106 TCTACGAGGGTACGTGGACTA 59.169 52.381 0.00 0.00 45.53 2.59
3772 7575 0.615331 TCTACGAGGGTACGTGGACT 59.385 55.000 0.00 0.00 45.53 3.85
3773 7576 3.159298 TCTACGAGGGTACGTGGAC 57.841 57.895 0.00 0.00 45.53 4.02
3775 7578 2.101700 GGTCTACGAGGGTACGTGG 58.898 63.158 0.00 0.00 46.02 4.94
3787 7590 1.740043 CGCTTGCGCTTACGGTCTAC 61.740 60.000 9.73 0.00 40.57 2.59
3788 7591 1.515519 CGCTTGCGCTTACGGTCTA 60.516 57.895 9.73 0.00 40.57 2.59
3789 7592 2.809601 CGCTTGCGCTTACGGTCT 60.810 61.111 9.73 0.00 40.57 3.85
3790 7593 1.346378 TAACGCTTGCGCTTACGGTC 61.346 55.000 15.21 0.00 40.57 4.79
3791 7594 0.738412 ATAACGCTTGCGCTTACGGT 60.738 50.000 15.21 10.77 40.57 4.83
3792 7595 0.315059 CATAACGCTTGCGCTTACGG 60.315 55.000 15.21 0.00 40.57 4.02
3793 7596 0.643310 TCATAACGCTTGCGCTTACG 59.357 50.000 15.21 12.05 44.07 3.18
3794 7597 1.392168 TGTCATAACGCTTGCGCTTAC 59.608 47.619 15.21 7.17 0.00 2.34
3795 7598 1.715993 TGTCATAACGCTTGCGCTTA 58.284 45.000 15.21 12.34 0.00 3.09
3796 7599 0.871722 TTGTCATAACGCTTGCGCTT 59.128 45.000 15.21 10.68 0.00 4.68
3797 7600 0.165944 GTTGTCATAACGCTTGCGCT 59.834 50.000 15.21 5.48 0.00 5.92
3798 7601 1.120147 CGTTGTCATAACGCTTGCGC 61.120 55.000 15.21 0.00 36.82 6.09
3799 7602 2.897855 CGTTGTCATAACGCTTGCG 58.102 52.632 13.70 13.70 36.82 4.85
3805 7608 0.785378 TCAACCGCGTTGTCATAACG 59.215 50.000 16.97 1.71 43.23 3.18
3806 7609 2.158841 ACATCAACCGCGTTGTCATAAC 59.841 45.455 16.97 0.00 43.23 1.89
3807 7610 2.418692 ACATCAACCGCGTTGTCATAA 58.581 42.857 16.97 2.99 43.23 1.90
3808 7611 2.087501 ACATCAACCGCGTTGTCATA 57.912 45.000 16.97 3.28 43.23 2.15
3809 7612 1.999735 CTACATCAACCGCGTTGTCAT 59.000 47.619 16.97 5.85 43.23 3.06
3810 7613 1.269883 ACTACATCAACCGCGTTGTCA 60.270 47.619 16.97 4.13 43.23 3.58
3811 7614 1.389106 GACTACATCAACCGCGTTGTC 59.611 52.381 16.97 5.64 43.23 3.18
3812 7615 1.425412 GACTACATCAACCGCGTTGT 58.575 50.000 16.97 9.99 43.23 3.32
3813 7616 0.365523 CGACTACATCAACCGCGTTG 59.634 55.000 4.92 10.14 43.99 4.10
3814 7617 0.038892 ACGACTACATCAACCGCGTT 60.039 50.000 4.92 0.00 0.00 4.84
3815 7618 0.804364 TACGACTACATCAACCGCGT 59.196 50.000 4.92 0.00 0.00 6.01
3816 7619 1.186030 GTACGACTACATCAACCGCG 58.814 55.000 0.00 0.00 0.00 6.46
3817 7620 1.186030 CGTACGACTACATCAACCGC 58.814 55.000 10.44 0.00 0.00 5.68
3818 7621 2.094894 AGACGTACGACTACATCAACCG 59.905 50.000 24.41 0.00 0.00 4.44
3819 7622 3.754188 AGACGTACGACTACATCAACC 57.246 47.619 24.41 0.00 0.00 3.77
3820 7623 4.552660 GTGAAGACGTACGACTACATCAAC 59.447 45.833 24.41 11.90 0.00 3.18
3821 7624 4.667415 CGTGAAGACGTACGACTACATCAA 60.667 45.833 24.41 4.49 42.54 2.57
3822 7625 3.181527 CGTGAAGACGTACGACTACATCA 60.182 47.826 24.41 18.00 42.54 3.07
3823 7626 3.061295 TCGTGAAGACGTACGACTACATC 59.939 47.826 24.41 15.62 46.20 3.06
3824 7627 2.995939 TCGTGAAGACGTACGACTACAT 59.004 45.455 24.41 6.17 46.20 2.29
3825 7628 2.403259 TCGTGAAGACGTACGACTACA 58.597 47.619 24.41 13.28 46.20 2.74
3831 7634 0.371301 TCGGATCGTGAAGACGTACG 59.629 55.000 15.01 15.01 46.20 3.67
3832 7635 1.530646 GGTCGGATCGTGAAGACGTAC 60.531 57.143 0.00 0.00 46.20 3.67
3833 7636 0.729116 GGTCGGATCGTGAAGACGTA 59.271 55.000 0.00 0.00 46.20 3.57
3834 7637 1.505353 GGTCGGATCGTGAAGACGT 59.495 57.895 0.00 0.00 46.20 4.34
3836 7639 0.381089 ATCGGTCGGATCGTGAAGAC 59.619 55.000 10.85 0.00 0.00 3.01
3837 7640 0.661552 GATCGGTCGGATCGTGAAGA 59.338 55.000 10.85 0.00 42.02 2.87
3838 7641 3.165559 GATCGGTCGGATCGTGAAG 57.834 57.895 10.85 0.00 42.02 3.02
3845 7648 1.610102 CGGTACTAGGATCGGTCGGAT 60.610 57.143 0.00 0.00 38.35 4.18
3846 7649 0.250038 CGGTACTAGGATCGGTCGGA 60.250 60.000 0.00 0.00 0.00 4.55
3847 7650 0.250038 TCGGTACTAGGATCGGTCGG 60.250 60.000 8.01 0.00 0.00 4.79
3848 7651 1.586422 TTCGGTACTAGGATCGGTCG 58.414 55.000 8.01 0.00 0.00 4.79
3849 7652 2.948315 ACTTTCGGTACTAGGATCGGTC 59.052 50.000 8.01 0.00 0.00 4.79
3850 7653 3.010200 ACTTTCGGTACTAGGATCGGT 57.990 47.619 8.01 0.00 0.00 4.69
3851 7654 3.059325 CGTACTTTCGGTACTAGGATCGG 60.059 52.174 8.01 0.00 46.19 4.18
3852 7655 3.059325 CCGTACTTTCGGTACTAGGATCG 60.059 52.174 0.00 0.00 46.19 3.69
3853 7656 4.480386 CCGTACTTTCGGTACTAGGATC 57.520 50.000 0.00 0.00 46.19 3.36
3864 7667 4.180496 GGAGGTGCCGTACTTTCG 57.820 61.111 0.00 0.00 0.00 3.46
3873 7676 2.512515 GCAGATCACGGAGGTGCC 60.513 66.667 0.00 0.00 44.03 5.01
3874 7677 2.887568 CGCAGATCACGGAGGTGC 60.888 66.667 0.00 0.00 44.03 5.01
3875 7678 2.887568 GCGCAGATCACGGAGGTG 60.888 66.667 0.30 0.00 45.78 4.00
3876 7679 3.381983 TGCGCAGATCACGGAGGT 61.382 61.111 5.66 0.00 0.00 3.85
3877 7680 2.887568 GTGCGCAGATCACGGAGG 60.888 66.667 12.22 0.00 0.00 4.30
3882 7685 1.417592 CTGAACGTGCGCAGATCAC 59.582 57.895 12.22 0.00 34.06 3.06
3883 7686 2.382746 GCTGAACGTGCGCAGATCA 61.383 57.895 12.22 14.85 34.06 2.92
3884 7687 2.018582 GAGCTGAACGTGCGCAGATC 62.019 60.000 12.22 10.41 39.88 2.75
3885 7688 2.047844 AGCTGAACGTGCGCAGAT 60.048 55.556 12.22 0.00 34.06 2.90
3886 7689 2.734723 GAGCTGAACGTGCGCAGA 60.735 61.111 12.22 0.00 34.06 4.26
3887 7690 4.126390 CGAGCTGAACGTGCGCAG 62.126 66.667 12.22 7.95 35.28 5.18
3890 7693 3.767230 CACCGAGCTGAACGTGCG 61.767 66.667 0.00 0.00 35.28 5.34
3891 7694 2.355837 TCACCGAGCTGAACGTGC 60.356 61.111 0.00 0.00 0.00 5.34
3892 7695 2.365068 CGTCACCGAGCTGAACGTG 61.365 63.158 0.00 0.00 35.63 4.49
3893 7696 1.509644 TACGTCACCGAGCTGAACGT 61.510 55.000 0.00 2.15 37.88 3.99
3894 7697 1.063951 GTACGTCACCGAGCTGAACG 61.064 60.000 0.00 0.00 37.88 3.95
3895 7698 0.731855 GGTACGTCACCGAGCTGAAC 60.732 60.000 0.00 0.00 37.63 3.18
3896 7699 1.582968 GGTACGTCACCGAGCTGAA 59.417 57.895 0.00 0.00 37.63 3.02
3897 7700 3.271014 GGTACGTCACCGAGCTGA 58.729 61.111 0.00 0.00 37.63 4.26
3905 7708 2.049228 CGAGAGTTTGTGGTACGTCAC 58.951 52.381 0.00 0.00 38.09 3.67
3906 7709 1.948834 TCGAGAGTTTGTGGTACGTCA 59.051 47.619 0.00 0.00 0.00 4.35
3907 7710 2.693797 TCGAGAGTTTGTGGTACGTC 57.306 50.000 0.00 0.00 0.00 4.34
3908 7711 2.094854 GGATCGAGAGTTTGTGGTACGT 60.095 50.000 0.00 0.00 0.00 3.57
3909 7712 2.094906 TGGATCGAGAGTTTGTGGTACG 60.095 50.000 0.00 0.00 0.00 3.67
3910 7713 3.512680 CTGGATCGAGAGTTTGTGGTAC 58.487 50.000 0.00 0.00 0.00 3.34
3911 7714 2.094182 GCTGGATCGAGAGTTTGTGGTA 60.094 50.000 9.17 0.00 0.00 3.25
3912 7715 1.338200 GCTGGATCGAGAGTTTGTGGT 60.338 52.381 9.17 0.00 0.00 4.16
3913 7716 1.066573 AGCTGGATCGAGAGTTTGTGG 60.067 52.381 9.17 0.00 0.00 4.17
3914 7717 1.998315 CAGCTGGATCGAGAGTTTGTG 59.002 52.381 9.17 0.00 0.00 3.33
3915 7718 1.895798 TCAGCTGGATCGAGAGTTTGT 59.104 47.619 15.13 0.00 0.00 2.83
3916 7719 2.094286 ACTCAGCTGGATCGAGAGTTTG 60.094 50.000 15.13 1.42 36.21 2.93
3917 7720 2.094286 CACTCAGCTGGATCGAGAGTTT 60.094 50.000 15.13 0.00 37.45 2.66
3918 7721 1.476085 CACTCAGCTGGATCGAGAGTT 59.524 52.381 15.13 0.00 37.45 3.01
3919 7722 1.102154 CACTCAGCTGGATCGAGAGT 58.898 55.000 15.13 4.92 39.95 3.24
3920 7723 1.065401 GACACTCAGCTGGATCGAGAG 59.935 57.143 15.13 4.20 0.00 3.20
3921 7724 1.098869 GACACTCAGCTGGATCGAGA 58.901 55.000 15.13 0.00 0.00 4.04
3922 7725 0.248417 CGACACTCAGCTGGATCGAG 60.248 60.000 15.13 5.80 0.00 4.04
3923 7726 0.676782 TCGACACTCAGCTGGATCGA 60.677 55.000 20.79 20.79 36.33 3.59
3924 7727 0.524392 GTCGACACTCAGCTGGATCG 60.524 60.000 15.13 16.89 0.00 3.69
3925 7728 0.524392 CGTCGACACTCAGCTGGATC 60.524 60.000 17.16 5.67 0.00 3.36
3926 7729 1.508545 CGTCGACACTCAGCTGGAT 59.491 57.895 17.16 0.00 0.00 3.41
3927 7730 2.626780 CCGTCGACACTCAGCTGGA 61.627 63.158 17.16 0.00 0.00 3.86
3928 7731 2.126307 CCGTCGACACTCAGCTGG 60.126 66.667 17.16 7.28 0.00 4.85
3929 7732 1.154131 CTCCGTCGACACTCAGCTG 60.154 63.158 17.16 7.63 0.00 4.24
3930 7733 1.302383 CTCTCCGTCGACACTCAGCT 61.302 60.000 17.16 0.00 0.00 4.24
3931 7734 1.135731 CTCTCCGTCGACACTCAGC 59.864 63.158 17.16 0.00 0.00 4.26
3932 7735 1.135731 GCTCTCCGTCGACACTCAG 59.864 63.158 17.16 6.78 0.00 3.35
3933 7736 0.889638 AAGCTCTCCGTCGACACTCA 60.890 55.000 17.16 0.00 0.00 3.41
3934 7737 0.179184 GAAGCTCTCCGTCGACACTC 60.179 60.000 17.16 0.00 0.00 3.51
3935 7738 0.889638 TGAAGCTCTCCGTCGACACT 60.890 55.000 17.16 0.00 0.00 3.55
3936 7739 0.171455 ATGAAGCTCTCCGTCGACAC 59.829 55.000 17.16 0.00 0.00 3.67
3937 7740 0.452184 GATGAAGCTCTCCGTCGACA 59.548 55.000 17.16 0.00 0.00 4.35
3938 7741 0.452184 TGATGAAGCTCTCCGTCGAC 59.548 55.000 5.18 5.18 0.00 4.20
3939 7742 0.735471 CTGATGAAGCTCTCCGTCGA 59.265 55.000 0.00 0.00 0.00 4.20
3940 7743 3.248626 CTGATGAAGCTCTCCGTCG 57.751 57.895 0.00 0.00 0.00 5.12
3950 7753 1.706301 CGCTGTCGTGCTGATGAAG 59.294 57.895 0.00 0.00 0.00 3.02
3951 7754 3.860717 CGCTGTCGTGCTGATGAA 58.139 55.556 0.00 0.00 0.00 2.57
3961 7764 0.387239 TCACTGTCATCACGCTGTCG 60.387 55.000 0.00 0.00 42.43 4.35
3962 7765 1.657594 CATCACTGTCATCACGCTGTC 59.342 52.381 0.00 0.00 0.00 3.51
3963 7766 1.273327 TCATCACTGTCATCACGCTGT 59.727 47.619 0.00 0.00 0.00 4.40
3964 7767 2.000429 TCATCACTGTCATCACGCTG 58.000 50.000 0.00 0.00 0.00 5.18
3965 7768 2.167075 TCATCATCACTGTCATCACGCT 59.833 45.455 0.00 0.00 0.00 5.07
3966 7769 2.543641 TCATCATCACTGTCATCACGC 58.456 47.619 0.00 0.00 0.00 5.34
3967 7770 3.001026 GCTTCATCATCACTGTCATCACG 59.999 47.826 0.00 0.00 0.00 4.35
3968 7771 4.190001 AGCTTCATCATCACTGTCATCAC 58.810 43.478 0.00 0.00 0.00 3.06
3969 7772 4.482952 AGCTTCATCATCACTGTCATCA 57.517 40.909 0.00 0.00 0.00 3.07
3970 7773 5.462729 CAGTAGCTTCATCATCACTGTCATC 59.537 44.000 0.00 0.00 31.06 2.92
3971 7774 5.358090 CAGTAGCTTCATCATCACTGTCAT 58.642 41.667 0.00 0.00 31.06 3.06
3972 7775 4.382362 CCAGTAGCTTCATCATCACTGTCA 60.382 45.833 7.92 0.00 33.23 3.58
3973 7776 4.118410 CCAGTAGCTTCATCATCACTGTC 58.882 47.826 7.92 0.00 33.23 3.51
3974 7777 3.681034 GCCAGTAGCTTCATCATCACTGT 60.681 47.826 7.92 0.00 38.99 3.55
3975 7778 2.871022 GCCAGTAGCTTCATCATCACTG 59.129 50.000 0.00 0.00 38.99 3.66
3976 7779 2.482664 CGCCAGTAGCTTCATCATCACT 60.483 50.000 0.00 0.00 40.39 3.41
3977 7780 1.863454 CGCCAGTAGCTTCATCATCAC 59.137 52.381 0.00 0.00 40.39 3.06
3978 7781 1.807755 GCGCCAGTAGCTTCATCATCA 60.808 52.381 0.00 0.00 40.39 3.07
3979 7782 0.864455 GCGCCAGTAGCTTCATCATC 59.136 55.000 0.00 0.00 40.39 2.92
3980 7783 0.178767 TGCGCCAGTAGCTTCATCAT 59.821 50.000 4.18 0.00 40.39 2.45
3981 7784 0.460811 CTGCGCCAGTAGCTTCATCA 60.461 55.000 4.18 0.00 40.39 3.07
3982 7785 1.156645 CCTGCGCCAGTAGCTTCATC 61.157 60.000 4.18 0.00 40.39 2.92
3983 7786 1.153289 CCTGCGCCAGTAGCTTCAT 60.153 57.895 4.18 0.00 40.39 2.57
3984 7787 2.265739 CCTGCGCCAGTAGCTTCA 59.734 61.111 4.18 0.00 40.39 3.02
3985 7788 2.512515 CCCTGCGCCAGTAGCTTC 60.513 66.667 4.18 0.00 40.39 3.86
3986 7789 4.785453 GCCCTGCGCCAGTAGCTT 62.785 66.667 4.18 0.00 40.39 3.74
3988 7791 4.785453 AAGCCCTGCGCCAGTAGC 62.785 66.667 4.18 7.85 38.78 3.58
3989 7792 2.512515 GAAGCCCTGCGCCAGTAG 60.513 66.667 4.18 0.00 38.78 2.57
3990 7793 4.451150 CGAAGCCCTGCGCCAGTA 62.451 66.667 4.18 0.00 38.78 2.74
4003 7806 1.641577 GTGGTAGTGCTTAGGCGAAG 58.358 55.000 2.68 2.68 42.25 3.79
4004 7807 0.108992 CGTGGTAGTGCTTAGGCGAA 60.109 55.000 0.00 0.00 42.25 4.70
4005 7808 0.961857 TCGTGGTAGTGCTTAGGCGA 60.962 55.000 0.00 0.00 42.25 5.54
4006 7809 0.102481 ATCGTGGTAGTGCTTAGGCG 59.898 55.000 0.00 0.00 42.25 5.52
4007 7810 3.005472 TCATATCGTGGTAGTGCTTAGGC 59.995 47.826 0.00 0.00 39.26 3.93
4008 7811 4.547532 GTCATATCGTGGTAGTGCTTAGG 58.452 47.826 0.00 0.00 0.00 2.69
4009 7812 4.547532 GGTCATATCGTGGTAGTGCTTAG 58.452 47.826 0.00 0.00 0.00 2.18
4010 7813 3.004002 CGGTCATATCGTGGTAGTGCTTA 59.996 47.826 0.00 0.00 0.00 3.09
4011 7814 2.223735 CGGTCATATCGTGGTAGTGCTT 60.224 50.000 0.00 0.00 0.00 3.91
4012 7815 1.337071 CGGTCATATCGTGGTAGTGCT 59.663 52.381 0.00 0.00 0.00 4.40
4013 7816 1.335810 TCGGTCATATCGTGGTAGTGC 59.664 52.381 0.00 0.00 0.00 4.40
4014 7817 2.031069 CCTCGGTCATATCGTGGTAGTG 60.031 54.545 0.00 0.00 36.77 2.74
4015 7818 2.228059 CCTCGGTCATATCGTGGTAGT 58.772 52.381 0.00 0.00 36.77 2.73
4016 7819 2.991434 CCTCGGTCATATCGTGGTAG 57.009 55.000 0.00 0.00 36.77 3.18
4018 7821 3.202548 ACCTCGGTCATATCGTGGT 57.797 52.632 0.73 0.73 45.70 4.16
4019 7822 0.032130 CCACCTCGGTCATATCGTGG 59.968 60.000 0.00 0.00 44.04 4.94
4020 7823 1.029681 TCCACCTCGGTCATATCGTG 58.970 55.000 0.00 0.00 35.57 4.35
4021 7824 1.030457 GTCCACCTCGGTCATATCGT 58.970 55.000 0.00 0.00 35.57 3.73
4022 7825 1.319541 AGTCCACCTCGGTCATATCG 58.680 55.000 0.00 0.00 35.57 2.92
4023 7826 3.193691 CCATAGTCCACCTCGGTCATATC 59.806 52.174 0.00 0.00 35.57 1.63
4024 7827 3.165875 CCATAGTCCACCTCGGTCATAT 58.834 50.000 0.00 0.00 35.57 1.78
4025 7828 2.091499 ACCATAGTCCACCTCGGTCATA 60.091 50.000 0.00 0.00 35.57 2.15
4026 7829 1.343075 ACCATAGTCCACCTCGGTCAT 60.343 52.381 0.00 0.00 35.57 3.06
4027 7830 0.040646 ACCATAGTCCACCTCGGTCA 59.959 55.000 0.00 0.00 35.57 4.02
4028 7831 0.460311 CACCATAGTCCACCTCGGTC 59.540 60.000 0.00 0.00 35.57 4.79
4029 7832 0.976073 CCACCATAGTCCACCTCGGT 60.976 60.000 0.00 0.00 35.57 4.69
4030 7833 0.686441 TCCACCATAGTCCACCTCGG 60.686 60.000 0.00 0.00 0.00 4.63
4031 7834 0.747255 CTCCACCATAGTCCACCTCG 59.253 60.000 0.00 0.00 0.00 4.63
4032 7835 1.123928 CCTCCACCATAGTCCACCTC 58.876 60.000 0.00 0.00 0.00 3.85
4033 7836 0.326618 CCCTCCACCATAGTCCACCT 60.327 60.000 0.00 0.00 0.00 4.00
4034 7837 1.345715 CCCCTCCACCATAGTCCACC 61.346 65.000 0.00 0.00 0.00 4.61
4035 7838 2.221918 CCCCTCCACCATAGTCCAC 58.778 63.158 0.00 0.00 0.00 4.02
4036 7839 4.829388 CCCCTCCACCATAGTCCA 57.171 61.111 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.