Multiple sequence alignment - TraesCS7D01G198100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G198100 chr7D 100.000 4483 0 0 1 4483 154390724 154395206 0.000000e+00 8279.0
1 TraesCS7D01G198100 chr7D 81.947 565 69 17 868 1407 154190745 154191301 8.850000e-122 448.0
2 TraesCS7D01G198100 chr7D 82.222 180 20 1 3093 3260 154194324 154194503 1.300000e-30 145.0
3 TraesCS7D01G198100 chr7D 95.455 44 2 0 3774 3817 154394423 154394466 2.240000e-08 71.3
4 TraesCS7D01G198100 chr7D 95.455 44 2 0 3700 3743 154394497 154394540 2.240000e-08 71.3
5 TraesCS7D01G198100 chr7A 90.448 1874 109 27 851 2687 156317964 156319804 0.000000e+00 2405.0
6 TraesCS7D01G198100 chr7A 90.193 622 52 6 1 621 156295046 156295659 0.000000e+00 802.0
7 TraesCS7D01G198100 chr7A 88.584 473 41 9 3061 3530 156320370 156320832 3.030000e-156 562.0
8 TraesCS7D01G198100 chr7A 81.738 564 69 18 870 1407 156128567 156129122 1.480000e-119 440.0
9 TraesCS7D01G198100 chr7A 78.585 537 65 22 3066 3553 156131678 156132213 4.360000e-80 309.0
10 TraesCS7D01G198100 chr7A 87.931 232 14 3 617 846 156316489 156316708 1.240000e-65 261.0
11 TraesCS7D01G198100 chr7B 93.921 1349 72 5 858 2198 116501050 116502396 0.000000e+00 2028.0
12 TraesCS7D01G198100 chr7B 91.201 841 63 7 1 838 116498930 116499762 0.000000e+00 1133.0
13 TraesCS7D01G198100 chr7B 93.590 624 24 7 2900 3520 116503093 116503703 0.000000e+00 917.0
14 TraesCS7D01G198100 chr7B 93.174 586 29 9 3899 4483 116518617 116519192 0.000000e+00 850.0
15 TraesCS7D01G198100 chr7B 89.384 471 27 9 2255 2707 116502554 116503019 5.030000e-159 571.0
16 TraesCS7D01G198100 chr7B 85.142 424 56 2 986 1408 116393524 116393941 1.150000e-115 427.0
17 TraesCS7D01G198100 chr7B 79.580 666 81 33 1782 2438 116395484 116396103 4.140000e-115 425.0
18 TraesCS7D01G198100 chr7B 95.588 68 3 0 3611 3678 116506587 116506654 4.740000e-20 110.0
19 TraesCS7D01G198100 chr7B 83.673 98 9 6 4154 4249 138750093 138750001 7.990000e-13 86.1
20 TraesCS7D01G198100 chr6D 99.497 199 1 0 2703 2901 26666997 26666799 3.300000e-96 363.0
21 TraesCS7D01G198100 chr4D 97.101 207 6 0 2703 2909 344531943 344532149 2.570000e-92 350.0
22 TraesCS7D01G198100 chr4D 86.813 91 9 3 4163 4252 320593735 320593823 1.030000e-16 99.0
23 TraesCS7D01G198100 chr4D 82.759 87 13 2 4163 4249 491948540 491948624 4.810000e-10 76.8
24 TraesCS7D01G198100 chr3D 97.101 207 6 0 2703 2909 190561119 190560913 2.570000e-92 350.0
25 TraesCS7D01G198100 chr3D 97.101 207 6 0 2703 2909 450381792 450381586 2.570000e-92 350.0
26 TraesCS7D01G198100 chr3D 96.618 207 7 0 2703 2909 398721519 398721313 1.190000e-90 344.0
27 TraesCS7D01G198100 chr3D 97.059 204 6 0 2706 2909 492178194 492177991 1.190000e-90 344.0
28 TraesCS7D01G198100 chr1D 97.537 203 5 0 2703 2905 113396254 113396052 9.230000e-92 348.0
29 TraesCS7D01G198100 chr1D 87.838 74 5 3 4163 4235 354458960 354458890 2.870000e-12 84.2
30 TraesCS7D01G198100 chr5B 95.413 218 8 2 2703 2918 100032215 100031998 3.320000e-91 346.0
31 TraesCS7D01G198100 chr2D 96.618 207 7 0 2703 2909 131686406 131686200 1.190000e-90 344.0
32 TraesCS7D01G198100 chr3B 84.375 96 13 2 4154 4249 827494370 827494463 4.770000e-15 93.5
33 TraesCS7D01G198100 chr3B 84.375 96 13 2 4154 4249 830634392 830634299 4.770000e-15 93.5
34 TraesCS7D01G198100 chr2A 85.393 89 9 3 4162 4249 80285632 80285547 6.180000e-14 89.8
35 TraesCS7D01G198100 chr3A 84.524 84 9 3 4163 4245 37500752 37500832 3.720000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G198100 chr7D 154390724 154395206 4482 False 2807.2 8279 96.970000 1 4483 3 chr7D.!!$F2 4482
1 TraesCS7D01G198100 chr7D 154190745 154194503 3758 False 296.5 448 82.084500 868 3260 2 chr7D.!!$F1 2392
2 TraesCS7D01G198100 chr7A 156316489 156320832 4343 False 1076.0 2405 88.987667 617 3530 3 chr7A.!!$F3 2913
3 TraesCS7D01G198100 chr7A 156295046 156295659 613 False 802.0 802 90.193000 1 621 1 chr7A.!!$F1 620
4 TraesCS7D01G198100 chr7A 156128567 156132213 3646 False 374.5 440 80.161500 870 3553 2 chr7A.!!$F2 2683
5 TraesCS7D01G198100 chr7B 116498930 116506654 7724 False 951.8 2028 92.736800 1 3678 5 chr7B.!!$F3 3677
6 TraesCS7D01G198100 chr7B 116518617 116519192 575 False 850.0 850 93.174000 3899 4483 1 chr7B.!!$F1 584
7 TraesCS7D01G198100 chr7B 116393524 116396103 2579 False 426.0 427 82.361000 986 2438 2 chr7B.!!$F2 1452

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
548 550 0.109723 GTGTTTGTACCCTCAGCCCA 59.890 55.000 0.0 0.0 0.0 5.36 F
549 551 0.109723 TGTTTGTACCCTCAGCCCAC 59.890 55.000 0.0 0.0 0.0 4.61 F
864 2149 0.109873 CGCCTCGTCACTCGTTTACT 60.110 55.000 0.0 0.0 40.8 2.24 F
2631 6470 1.064505 CTTGCCAGTTGCGACCATATG 59.935 52.381 0.0 0.0 45.6 1.78 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1948 5137 0.329596 AACTTCTCAGGGTCCATGGC 59.670 55.000 6.96 1.78 0.00 4.40 R
2145 5336 1.999735 CAACTGAAGCTTATTCGCCGA 59.000 47.619 0.00 0.00 0.00 5.54 R
2757 6649 0.179468 GGGCCATGCATGCTTTCAAT 59.821 50.000 21.69 0.00 0.00 2.57 R
3985 10976 0.257039 CCTCATGGAAGGGACCAAGG 59.743 60.000 0.00 0.00 43.47 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
75 76 5.523916 CCCATGATTAACGACACCTAGAAAG 59.476 44.000 0.00 0.00 0.00 2.62
195 196 6.156256 ACACTATATGTCTTAAAGGAGGCACA 59.844 38.462 0.00 0.00 36.54 4.57
197 198 2.561478 TGTCTTAAAGGAGGCACACC 57.439 50.000 0.00 0.00 40.21 4.16
328 329 5.115773 CGGAGAATACGAAATCGACTTGATC 59.884 44.000 10.16 0.86 43.02 2.92
331 332 5.980116 AGAATACGAAATCGACTTGATCTGG 59.020 40.000 10.16 0.00 43.02 3.86
437 439 3.063510 TCCTCCATTTGAGACAAGCAG 57.936 47.619 0.00 0.00 44.42 4.24
466 468 7.251281 ACGATTGCTTCTAAATTCCTTTTAGC 58.749 34.615 0.00 0.00 44.34 3.09
467 469 6.693113 CGATTGCTTCTAAATTCCTTTTAGCC 59.307 38.462 0.00 0.00 44.34 3.93
486 488 9.871238 TTTTAGCCAGTTGTTTGTATGTAAAAA 57.129 25.926 0.00 0.00 0.00 1.94
489 491 7.777095 AGCCAGTTGTTTGTATGTAAAAAGAA 58.223 30.769 0.00 0.00 0.00 2.52
547 549 0.608308 GGTGTTTGTACCCTCAGCCC 60.608 60.000 0.00 0.00 34.56 5.19
548 550 0.109723 GTGTTTGTACCCTCAGCCCA 59.890 55.000 0.00 0.00 0.00 5.36
549 551 0.109723 TGTTTGTACCCTCAGCCCAC 59.890 55.000 0.00 0.00 0.00 4.61
550 552 0.608308 GTTTGTACCCTCAGCCCACC 60.608 60.000 0.00 0.00 0.00 4.61
551 553 1.785353 TTTGTACCCTCAGCCCACCC 61.785 60.000 0.00 0.00 0.00 4.61
566 568 1.273211 CCACCCCACCAAGGATCAAAT 60.273 52.381 0.00 0.00 41.22 2.32
577 579 7.069085 CCACCAAGGATCAAATCATAGATTTGT 59.931 37.037 23.87 15.30 41.22 2.83
647 649 4.647611 TGTTTTCATCGATACCCAGTGTT 58.352 39.130 0.00 0.00 0.00 3.32
677 679 3.648067 TCTTCACCAATCTCAAGGTCTGT 59.352 43.478 0.00 0.00 35.52 3.41
692 694 5.808366 AGGTCTGTTGACTTAATCTCACA 57.192 39.130 0.00 0.00 42.54 3.58
713 715 3.134623 CACAGGTGCTCATATGGGTAAGA 59.865 47.826 4.11 0.00 0.00 2.10
715 717 5.012046 CACAGGTGCTCATATGGGTAAGATA 59.988 44.000 4.11 0.00 0.00 1.98
741 743 8.770438 TGCACGCATGTCTTCATATATATAAA 57.230 30.769 0.00 0.00 32.47 1.40
846 853 4.865776 TGACAAAACAAATAAGAAGGGCG 58.134 39.130 0.00 0.00 0.00 6.13
848 855 2.993220 CAAAACAAATAAGAAGGGCGCC 59.007 45.455 21.18 21.18 0.00 6.53
849 856 2.215942 AACAAATAAGAAGGGCGCCT 57.784 45.000 28.56 7.30 33.87 5.52
850 857 1.751437 ACAAATAAGAAGGGCGCCTC 58.249 50.000 28.56 17.60 30.89 4.70
851 858 0.657840 CAAATAAGAAGGGCGCCTCG 59.342 55.000 28.56 0.00 30.89 4.63
852 859 0.252197 AAATAAGAAGGGCGCCTCGT 59.748 50.000 28.56 17.59 30.89 4.18
853 860 0.179081 AATAAGAAGGGCGCCTCGTC 60.179 55.000 28.56 22.35 30.89 4.20
854 861 1.327690 ATAAGAAGGGCGCCTCGTCA 61.328 55.000 28.56 9.53 30.88 4.35
855 862 2.221906 TAAGAAGGGCGCCTCGTCAC 62.222 60.000 28.56 8.41 30.88 3.67
856 863 4.070552 GAAGGGCGCCTCGTCACT 62.071 66.667 28.56 11.02 30.88 3.41
864 2149 0.109873 CGCCTCGTCACTCGTTTACT 60.110 55.000 0.00 0.00 40.80 2.24
941 2232 2.095567 CCTCCGATCTTTGTGCAAACAG 60.096 50.000 0.00 0.00 0.00 3.16
1167 2479 2.060383 CCAGAGATCCTCCGCCACA 61.060 63.158 0.00 0.00 0.00 4.17
1218 2530 1.607251 CCAACTCAACCCTGTACGGTC 60.607 57.143 0.00 0.00 33.98 4.79
1373 2686 3.123621 GCGCCTTCGGTATTGATCTAATG 59.876 47.826 0.00 0.00 35.95 1.90
1572 4370 3.857093 ACTTTGCAACGTTTGATCAACAC 59.143 39.130 7.89 8.87 34.68 3.32
1677 4732 5.242069 TGATCGACTCTCAGATGAAGAAC 57.758 43.478 0.00 0.00 0.00 3.01
1774 4961 6.203530 TGCATAGCATGTTCTATGTTCTTAGC 59.796 38.462 16.84 6.15 44.73 3.09
1939 5128 1.374631 GAGCGGCGGCATGATATGA 60.375 57.895 19.21 0.00 43.41 2.15
1948 5137 3.268330 CGGCATGATATGAATCCTCCTG 58.732 50.000 0.00 0.00 0.00 3.86
2035 5225 7.072030 CAGAGATTTTTGTGTTGTACTAGTGC 58.928 38.462 5.39 4.49 0.00 4.40
2045 5235 4.984161 TGTTGTACTAGTGCCGTTAAAGAC 59.016 41.667 5.39 0.00 0.00 3.01
2183 5374 4.012374 AGTTGCATTCTGTAAGTCATGGG 58.988 43.478 0.00 0.00 33.76 4.00
2198 5423 4.975631 GTCATGGGACTAGCTCTAGACTA 58.024 47.826 10.63 0.00 40.99 2.59
2202 5427 6.895756 TCATGGGACTAGCTCTAGACTAAAAA 59.104 38.462 10.63 0.00 36.97 1.94
2326 5680 1.661498 TTGCTTGGTTGCAGCGTGAA 61.661 50.000 0.00 0.00 44.27 3.18
2444 6250 9.311916 CAGAAAAATGTGGTCTTCAATTGTTTA 57.688 29.630 5.13 0.00 0.00 2.01
2551 6372 3.332919 CACACTTCTCTTCCTGACCATG 58.667 50.000 0.00 0.00 0.00 3.66
2552 6373 2.304180 ACACTTCTCTTCCTGACCATGG 59.696 50.000 11.19 11.19 0.00 3.66
2583 6419 3.989817 TCATCATTGTTCACACTCTGACG 59.010 43.478 0.00 0.00 0.00 4.35
2631 6470 1.064505 CTTGCCAGTTGCGACCATATG 59.935 52.381 0.00 0.00 45.60 1.78
2697 6589 9.868160 TCTAGTTTGGTGATATCTAAGAGATCA 57.132 33.333 3.98 2.00 37.85 2.92
2711 6603 7.503549 TCTAAGAGATCAGAATTAGCATTGCA 58.496 34.615 11.91 0.00 0.00 4.08
2713 6605 6.561737 AGAGATCAGAATTAGCATTGCATG 57.438 37.500 11.91 0.00 0.00 4.06
2731 6623 3.855689 ATGCAATGAACTAACCACTGC 57.144 42.857 0.00 0.00 0.00 4.40
2732 6624 2.580962 TGCAATGAACTAACCACTGCA 58.419 42.857 0.00 0.00 36.06 4.41
2734 6626 3.057386 TGCAATGAACTAACCACTGCATG 60.057 43.478 0.00 0.00 33.65 4.06
2735 6627 3.057315 GCAATGAACTAACCACTGCATGT 60.057 43.478 0.00 0.00 0.00 3.21
2736 6628 4.726416 CAATGAACTAACCACTGCATGTC 58.274 43.478 0.00 0.00 0.00 3.06
2739 6631 3.752747 TGAACTAACCACTGCATGTCATG 59.247 43.478 8.56 8.56 0.00 3.07
2743 6635 3.374220 AACCACTGCATGTCATGTTTG 57.626 42.857 14.26 8.62 0.00 2.93
2744 6636 1.614903 ACCACTGCATGTCATGTTTGG 59.385 47.619 19.80 19.80 34.06 3.28
2745 6637 1.614903 CCACTGCATGTCATGTTTGGT 59.385 47.619 14.26 5.69 0.00 3.67
2746 6638 2.819019 CCACTGCATGTCATGTTTGGTA 59.181 45.455 14.26 0.00 0.00 3.25
2747 6639 3.119743 CCACTGCATGTCATGTTTGGTAG 60.120 47.826 14.26 6.33 0.00 3.18
2749 6641 3.753272 ACTGCATGTCATGTTTGGTAGTC 59.247 43.478 14.26 0.00 0.00 2.59
2750 6642 4.005650 CTGCATGTCATGTTTGGTAGTCT 58.994 43.478 14.26 0.00 0.00 3.24
2751 6643 4.002982 TGCATGTCATGTTTGGTAGTCTC 58.997 43.478 14.26 0.00 0.00 3.36
2752 6644 4.002982 GCATGTCATGTTTGGTAGTCTCA 58.997 43.478 14.26 0.00 0.00 3.27
2753 6645 4.455533 GCATGTCATGTTTGGTAGTCTCAA 59.544 41.667 14.26 0.00 0.00 3.02
2754 6646 5.391310 GCATGTCATGTTTGGTAGTCTCAAG 60.391 44.000 14.26 0.00 0.00 3.02
2755 6647 5.290493 TGTCATGTTTGGTAGTCTCAAGT 57.710 39.130 0.00 0.00 0.00 3.16
2756 6648 5.297547 TGTCATGTTTGGTAGTCTCAAGTC 58.702 41.667 0.00 0.00 0.00 3.01
2757 6649 5.163353 TGTCATGTTTGGTAGTCTCAAGTCA 60.163 40.000 0.00 0.00 0.00 3.41
2758 6650 5.934625 GTCATGTTTGGTAGTCTCAAGTCAT 59.065 40.000 0.00 0.00 0.00 3.06
2759 6651 6.428159 GTCATGTTTGGTAGTCTCAAGTCATT 59.572 38.462 0.00 0.00 0.00 2.57
2761 6653 5.924356 TGTTTGGTAGTCTCAAGTCATTGA 58.076 37.500 0.00 0.00 43.20 2.57
2763 6655 6.826231 TGTTTGGTAGTCTCAAGTCATTGAAA 59.174 34.615 0.00 0.00 44.68 2.69
2764 6656 7.012327 TGTTTGGTAGTCTCAAGTCATTGAAAG 59.988 37.037 0.00 0.00 44.68 2.62
2765 6657 4.997395 TGGTAGTCTCAAGTCATTGAAAGC 59.003 41.667 0.00 0.00 44.68 3.51
2767 6659 5.645497 GGTAGTCTCAAGTCATTGAAAGCAT 59.355 40.000 0.00 0.00 44.68 3.79
2768 6660 5.624344 AGTCTCAAGTCATTGAAAGCATG 57.376 39.130 0.00 0.00 44.68 4.06
2769 6661 4.082895 AGTCTCAAGTCATTGAAAGCATGC 60.083 41.667 10.51 10.51 44.68 4.06
2770 6662 3.822167 TCTCAAGTCATTGAAAGCATGCA 59.178 39.130 21.98 0.00 44.68 3.96
2771 6663 4.461431 TCTCAAGTCATTGAAAGCATGCAT 59.539 37.500 21.98 4.57 44.68 3.96
2773 6665 3.520290 AGTCATTGAAAGCATGCATGG 57.480 42.857 27.34 10.03 0.00 3.66
2774 6666 1.931172 GTCATTGAAAGCATGCATGGC 59.069 47.619 27.34 18.86 0.00 4.40
2775 6667 1.134640 TCATTGAAAGCATGCATGGCC 60.135 47.619 27.34 12.23 0.00 5.36
2776 6668 0.179468 ATTGAAAGCATGCATGGCCC 59.821 50.000 27.34 11.50 0.00 5.80
2777 6669 1.192803 TTGAAAGCATGCATGGCCCA 61.193 50.000 27.34 14.06 0.00 5.36
2778 6670 1.153509 GAAAGCATGCATGGCCCAC 60.154 57.895 27.34 10.75 0.00 4.61
2780 6672 1.268992 AAAGCATGCATGGCCCACAT 61.269 50.000 27.34 0.98 41.57 3.21
2782 6674 2.131709 GCATGCATGGCCCACATCT 61.132 57.895 27.34 0.00 37.84 2.90
2783 6675 2.038690 CATGCATGGCCCACATCTC 58.961 57.895 19.40 0.00 37.84 2.75
2784 6676 0.467474 CATGCATGGCCCACATCTCT 60.467 55.000 19.40 0.00 37.84 3.10
2785 6677 0.260816 ATGCATGGCCCACATCTCTT 59.739 50.000 0.00 0.00 37.84 2.85
2786 6678 0.918258 TGCATGGCCCACATCTCTTA 59.082 50.000 0.00 0.00 37.84 2.10
2787 6679 1.496001 TGCATGGCCCACATCTCTTAT 59.504 47.619 0.00 0.00 37.84 1.73
2788 6680 2.091720 TGCATGGCCCACATCTCTTATT 60.092 45.455 0.00 0.00 37.84 1.40
2789 6681 2.295349 GCATGGCCCACATCTCTTATTG 59.705 50.000 0.00 0.00 37.84 1.90
2790 6682 2.734755 TGGCCCACATCTCTTATTGG 57.265 50.000 0.00 0.00 0.00 3.16
2791 6683 1.922447 TGGCCCACATCTCTTATTGGT 59.078 47.619 0.00 0.00 0.00 3.67
2792 6684 2.311542 TGGCCCACATCTCTTATTGGTT 59.688 45.455 0.00 0.00 0.00 3.67
2793 6685 2.689983 GGCCCACATCTCTTATTGGTTG 59.310 50.000 0.00 0.00 0.00 3.77
2794 6686 3.620488 GCCCACATCTCTTATTGGTTGA 58.380 45.455 0.00 0.00 0.00 3.18
2796 6688 5.376625 GCCCACATCTCTTATTGGTTGATA 58.623 41.667 0.00 0.00 0.00 2.15
2798 6690 6.072286 GCCCACATCTCTTATTGGTTGATATG 60.072 42.308 0.00 0.00 0.00 1.78
2800 6692 7.173907 CCCACATCTCTTATTGGTTGATATGTC 59.826 40.741 0.00 0.00 29.24 3.06
2801 6693 7.716560 CCACATCTCTTATTGGTTGATATGTCA 59.283 37.037 0.00 0.00 29.24 3.58
2802 6694 8.554528 CACATCTCTTATTGGTTGATATGTCAC 58.445 37.037 0.00 0.00 33.11 3.67
2803 6695 8.267183 ACATCTCTTATTGGTTGATATGTCACA 58.733 33.333 0.00 0.00 33.11 3.58
2805 6697 9.685276 ATCTCTTATTGGTTGATATGTCACAAA 57.315 29.630 0.00 0.00 33.11 2.83
2806 6698 9.513906 TCTCTTATTGGTTGATATGTCACAAAA 57.486 29.630 0.00 0.00 33.11 2.44
2807 6699 9.559958 CTCTTATTGGTTGATATGTCACAAAAC 57.440 33.333 0.00 0.00 33.11 2.43
2810 6702 9.689976 TTATTGGTTGATATGTCACAAAACAAG 57.310 29.630 0.00 0.00 33.11 3.16
2811 6703 6.951062 TGGTTGATATGTCACAAAACAAGA 57.049 33.333 0.00 0.00 33.11 3.02
2812 6704 7.340122 TGGTTGATATGTCACAAAACAAGAA 57.660 32.000 0.00 0.00 33.11 2.52
2814 6706 7.704472 TGGTTGATATGTCACAAAACAAGAAAC 59.296 33.333 0.00 0.00 33.11 2.78
2815 6707 7.096640 GGTTGATATGTCACAAAACAAGAAACG 60.097 37.037 0.00 0.00 33.11 3.60
2826 6751 2.047830 ACAAGAAACGAGGAGGGAGTT 58.952 47.619 0.00 0.00 0.00 3.01
2827 6752 3.236896 ACAAGAAACGAGGAGGGAGTTA 58.763 45.455 0.00 0.00 0.00 2.24
2828 6753 3.644738 ACAAGAAACGAGGAGGGAGTTAA 59.355 43.478 0.00 0.00 0.00 2.01
2829 6754 4.286291 ACAAGAAACGAGGAGGGAGTTAAT 59.714 41.667 0.00 0.00 0.00 1.40
2830 6755 4.473477 AGAAACGAGGAGGGAGTTAATG 57.527 45.455 0.00 0.00 0.00 1.90
2832 6757 5.021458 AGAAACGAGGAGGGAGTTAATGTA 58.979 41.667 0.00 0.00 0.00 2.29
2833 6758 4.732672 AACGAGGAGGGAGTTAATGTAC 57.267 45.455 0.00 0.00 0.00 2.90
2834 6759 3.029570 ACGAGGAGGGAGTTAATGTACC 58.970 50.000 0.00 0.00 0.00 3.34
2835 6760 2.034305 CGAGGAGGGAGTTAATGTACCG 59.966 54.545 0.00 0.00 0.00 4.02
2836 6761 3.029570 GAGGAGGGAGTTAATGTACCGT 58.970 50.000 0.00 0.00 0.00 4.83
2837 6762 2.764572 AGGAGGGAGTTAATGTACCGTG 59.235 50.000 0.00 0.00 0.00 4.94
2841 6766 2.431782 GGGAGTTAATGTACCGTGCCTA 59.568 50.000 0.00 0.00 0.00 3.93
2843 6768 4.117685 GGAGTTAATGTACCGTGCCTAAG 58.882 47.826 0.00 0.00 0.00 2.18
2844 6769 4.382362 GGAGTTAATGTACCGTGCCTAAGT 60.382 45.833 0.00 0.00 0.00 2.24
2845 6770 5.163519 GGAGTTAATGTACCGTGCCTAAGTA 60.164 44.000 0.00 0.00 0.00 2.24
2846 6771 6.462067 GGAGTTAATGTACCGTGCCTAAGTAT 60.462 42.308 0.00 0.00 0.00 2.12
2847 6772 6.881570 AGTTAATGTACCGTGCCTAAGTATT 58.118 36.000 0.00 0.00 0.00 1.89
2849 6774 7.825761 AGTTAATGTACCGTGCCTAAGTATTTT 59.174 33.333 0.00 0.00 0.00 1.82
2850 6775 6.431198 AATGTACCGTGCCTAAGTATTTTG 57.569 37.500 0.00 0.00 0.00 2.44
2851 6776 4.255301 TGTACCGTGCCTAAGTATTTTGG 58.745 43.478 0.00 0.00 33.04 3.28
2852 6777 2.718563 ACCGTGCCTAAGTATTTTGGG 58.281 47.619 0.99 0.00 30.91 4.12
2853 6778 2.306512 ACCGTGCCTAAGTATTTTGGGA 59.693 45.455 0.99 0.00 30.91 4.37
2856 6781 5.127491 CCGTGCCTAAGTATTTTGGGATTA 58.873 41.667 0.99 0.00 32.82 1.75
2857 6782 5.768164 CCGTGCCTAAGTATTTTGGGATTAT 59.232 40.000 0.99 0.00 32.82 1.28
2858 6783 6.264518 CCGTGCCTAAGTATTTTGGGATTATT 59.735 38.462 0.99 0.00 32.82 1.40
2859 6784 7.201875 CCGTGCCTAAGTATTTTGGGATTATTT 60.202 37.037 0.99 0.00 32.82 1.40
2860 6785 7.647715 CGTGCCTAAGTATTTTGGGATTATTTG 59.352 37.037 0.99 0.00 32.82 2.32
2861 6786 7.926018 GTGCCTAAGTATTTTGGGATTATTTGG 59.074 37.037 0.99 0.00 32.82 3.28
2863 6788 8.482943 GCCTAAGTATTTTGGGATTATTTGGTT 58.517 33.333 0.99 0.00 30.91 3.67
2867 6792 8.996024 AGTATTTTGGGATTATTTGGTTTTCG 57.004 30.769 0.00 0.00 0.00 3.46
2868 6793 8.590204 AGTATTTTGGGATTATTTGGTTTTCGT 58.410 29.630 0.00 0.00 0.00 3.85
2871 6796 8.819643 TTTTGGGATTATTTGGTTTTCGTAAG 57.180 30.769 0.00 0.00 0.00 2.34
2872 6797 6.518208 TGGGATTATTTGGTTTTCGTAAGG 57.482 37.500 0.00 0.00 38.47 2.69
2873 6798 6.011481 TGGGATTATTTGGTTTTCGTAAGGT 58.989 36.000 0.00 0.00 38.47 3.50
2874 6799 6.071840 TGGGATTATTTGGTTTTCGTAAGGTG 60.072 38.462 0.00 0.00 38.47 4.00
2893 6818 3.144657 TGACTTACACACCTAGACGGA 57.855 47.619 0.00 0.00 36.31 4.69
2895 6820 2.422832 GACTTACACACCTAGACGGAGG 59.577 54.545 0.00 0.00 42.89 4.30
2896 6821 1.749634 CTTACACACCTAGACGGAGGG 59.250 57.143 5.42 0.00 41.36 4.30
2897 6822 0.994247 TACACACCTAGACGGAGGGA 59.006 55.000 5.42 0.00 41.36 4.20
2919 6844 7.175119 AGGGAGTAGTTTTTCTTAAGATGCAAC 59.825 37.037 5.89 9.44 0.00 4.17
2967 6892 1.731720 GACCTGCTCCATCTCACAAC 58.268 55.000 0.00 0.00 0.00 3.32
3015 6940 3.277142 TCTAGTAGCCACGAGACATGA 57.723 47.619 0.00 0.00 32.20 3.07
3058 7153 8.611654 TGATAGGATGTCATGTATTTGATGTG 57.388 34.615 0.00 0.00 0.00 3.21
3059 7154 8.431222 TGATAGGATGTCATGTATTTGATGTGA 58.569 33.333 0.00 0.00 0.00 3.58
3060 7155 9.445878 GATAGGATGTCATGTATTTGATGTGAT 57.554 33.333 0.00 0.00 0.00 3.06
3061 7156 7.741027 AGGATGTCATGTATTTGATGTGATC 57.259 36.000 0.00 0.00 0.00 2.92
3062 7157 7.284820 AGGATGTCATGTATTTGATGTGATCA 58.715 34.615 0.00 0.00 37.55 2.92
3063 7158 7.942894 AGGATGTCATGTATTTGATGTGATCAT 59.057 33.333 0.00 0.00 39.39 2.45
3076 7171 3.959293 TGTGATCATGTGAGCATCCTTT 58.041 40.909 4.12 0.00 42.80 3.11
3077 7172 4.338012 TGTGATCATGTGAGCATCCTTTT 58.662 39.130 4.12 0.00 42.80 2.27
3078 7173 5.499313 TGTGATCATGTGAGCATCCTTTTA 58.501 37.500 4.12 0.00 42.80 1.52
3082 7177 7.487189 GTGATCATGTGAGCATCCTTTTAAAAG 59.513 37.037 19.19 19.19 42.80 2.27
3204 7317 5.048434 AGCTAAAGGAAAAGAACATGCTGAC 60.048 40.000 0.00 0.00 0.00 3.51
3286 7425 2.839474 CGTTTGACTTTGAGGCGATTC 58.161 47.619 0.00 0.00 0.00 2.52
3300 7439 2.607635 GGCGATTCTATTTGAGCGTTGA 59.392 45.455 0.00 0.00 0.00 3.18
3310 7449 8.221965 TCTATTTGAGCGTTGATCTAACTCTA 57.778 34.615 8.98 1.19 34.62 2.43
3380 7524 4.713553 TGAAATTGTAGGCTGAAGACACA 58.286 39.130 0.00 0.00 0.00 3.72
3386 7530 1.450312 GGCTGAAGACACATCCCGG 60.450 63.158 0.00 0.00 0.00 5.73
3454 7598 4.142271 CCTTGATAGAGAGCGTTCAAGAGT 60.142 45.833 11.90 0.00 44.97 3.24
3468 7612 6.237595 GCGTTCAAGAGTACTTAGTGCTAATG 60.238 42.308 2.37 5.88 34.70 1.90
3517 7691 2.667481 CTGGCAGTTGTTGTTGTTGTTG 59.333 45.455 6.28 0.00 0.00 3.33
3518 7692 2.036475 TGGCAGTTGTTGTTGTTGTTGT 59.964 40.909 0.00 0.00 0.00 3.32
3519 7693 3.063485 GGCAGTTGTTGTTGTTGTTGTT 58.937 40.909 0.00 0.00 0.00 2.83
3520 7694 3.120718 GGCAGTTGTTGTTGTTGTTGTTG 60.121 43.478 0.00 0.00 0.00 3.33
3521 7695 3.492756 GCAGTTGTTGTTGTTGTTGTTGT 59.507 39.130 0.00 0.00 0.00 3.32
3522 7696 4.025313 GCAGTTGTTGTTGTTGTTGTTGTT 60.025 37.500 0.00 0.00 0.00 2.83
3523 7697 5.430462 CAGTTGTTGTTGTTGTTGTTGTTG 58.570 37.500 0.00 0.00 0.00 3.33
3524 7698 5.006165 CAGTTGTTGTTGTTGTTGTTGTTGT 59.994 36.000 0.00 0.00 0.00 3.32
3525 7699 5.582665 AGTTGTTGTTGTTGTTGTTGTTGTT 59.417 32.000 0.00 0.00 0.00 2.83
3526 7700 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
3527 7701 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
3528 7702 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
3529 7703 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
3530 7704 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
3531 7705 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
3532 7706 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
3533 7707 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
3534 7708 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
3535 7709 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
3536 7710 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
3537 7711 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
3538 7712 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
3539 7713 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
3540 7714 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
3557 7731 4.508124 TGTTGTTGTTGTTGTTGTTGTTCC 59.492 37.500 0.00 0.00 0.00 3.62
3558 7732 4.592485 TGTTGTTGTTGTTGTTGTTCCT 57.408 36.364 0.00 0.00 0.00 3.36
3559 7733 4.551388 TGTTGTTGTTGTTGTTGTTCCTC 58.449 39.130 0.00 0.00 0.00 3.71
3560 7734 4.038042 TGTTGTTGTTGTTGTTGTTCCTCA 59.962 37.500 0.00 0.00 0.00 3.86
3561 7735 4.167554 TGTTGTTGTTGTTGTTCCTCAC 57.832 40.909 0.00 0.00 0.00 3.51
3562 7736 3.823873 TGTTGTTGTTGTTGTTCCTCACT 59.176 39.130 0.00 0.00 0.00 3.41
3563 7737 4.279671 TGTTGTTGTTGTTGTTCCTCACTT 59.720 37.500 0.00 0.00 0.00 3.16
3564 7738 4.433186 TGTTGTTGTTGTTCCTCACTTG 57.567 40.909 0.00 0.00 0.00 3.16
3565 7739 3.823873 TGTTGTTGTTGTTCCTCACTTGT 59.176 39.130 0.00 0.00 0.00 3.16
3566 7740 4.279671 TGTTGTTGTTGTTCCTCACTTGTT 59.720 37.500 0.00 0.00 0.00 2.83
3568 7742 5.461032 TGTTGTTGTTCCTCACTTGTTTT 57.539 34.783 0.00 0.00 0.00 2.43
3569 7743 6.576662 TGTTGTTGTTCCTCACTTGTTTTA 57.423 33.333 0.00 0.00 0.00 1.52
3571 7745 5.224562 TGTTGTTCCTCACTTGTTTTACG 57.775 39.130 0.00 0.00 0.00 3.18
3572 7746 4.696402 TGTTGTTCCTCACTTGTTTTACGT 59.304 37.500 0.00 0.00 0.00 3.57
3591 7823 7.760131 TTACGTGTTTACCTTGTCTATATGC 57.240 36.000 0.00 0.00 0.00 3.14
3615 7847 4.695455 GCAGTGTAAGATTACAAGGAAGCA 59.305 41.667 6.99 0.00 44.46 3.91
3616 7848 5.181245 GCAGTGTAAGATTACAAGGAAGCAA 59.819 40.000 6.99 0.00 44.46 3.91
3678 10669 1.315257 CCCTTTGATGTGGGAAGCCG 61.315 60.000 0.00 0.00 46.15 5.52
3679 10670 1.315257 CCTTTGATGTGGGAAGCCGG 61.315 60.000 0.00 0.00 0.00 6.13
3680 10671 1.937546 CTTTGATGTGGGAAGCCGGC 61.938 60.000 21.89 21.89 0.00 6.13
3681 10672 3.936772 TTGATGTGGGAAGCCGGCC 62.937 63.158 26.15 8.83 0.00 6.13
3682 10673 4.115199 GATGTGGGAAGCCGGCCT 62.115 66.667 26.15 11.38 0.00 5.19
3683 10674 2.690881 ATGTGGGAAGCCGGCCTA 60.691 61.111 26.15 2.16 0.00 3.93
3684 10675 2.056906 GATGTGGGAAGCCGGCCTAT 62.057 60.000 26.15 10.30 0.00 2.57
3685 10676 0.766674 ATGTGGGAAGCCGGCCTATA 60.767 55.000 26.15 4.39 0.00 1.31
3686 10677 1.371558 GTGGGAAGCCGGCCTATAG 59.628 63.158 26.15 0.00 0.00 1.31
3687 10678 2.347866 GGGAAGCCGGCCTATAGC 59.652 66.667 26.15 6.01 42.60 2.97
3688 10679 2.217745 GGGAAGCCGGCCTATAGCT 61.218 63.158 26.15 0.00 43.05 3.32
3689 10680 1.293818 GGAAGCCGGCCTATAGCTC 59.706 63.158 26.15 8.30 43.05 4.09
3690 10681 1.188871 GGAAGCCGGCCTATAGCTCT 61.189 60.000 26.15 0.00 43.05 4.09
3691 10682 1.546961 GAAGCCGGCCTATAGCTCTA 58.453 55.000 26.15 0.00 43.05 2.43
3692 10683 2.104170 GAAGCCGGCCTATAGCTCTAT 58.896 52.381 26.15 0.00 43.05 1.98
3693 10684 1.479709 AGCCGGCCTATAGCTCTATG 58.520 55.000 26.15 0.00 43.05 2.23
3694 10685 1.006043 AGCCGGCCTATAGCTCTATGA 59.994 52.381 26.15 0.00 43.05 2.15
3695 10686 1.407258 GCCGGCCTATAGCTCTATGAG 59.593 57.143 18.11 0.00 43.05 2.90
3696 10687 2.028130 CCGGCCTATAGCTCTATGAGG 58.972 57.143 0.00 0.00 43.05 3.86
3697 10688 2.357257 CCGGCCTATAGCTCTATGAGGA 60.357 54.545 0.00 0.00 43.05 3.71
3698 10689 3.357203 CGGCCTATAGCTCTATGAGGAA 58.643 50.000 0.00 0.00 43.05 3.36
3699 10690 3.764434 CGGCCTATAGCTCTATGAGGAAA 59.236 47.826 0.00 0.00 43.05 3.13
3700 10691 4.220821 CGGCCTATAGCTCTATGAGGAAAA 59.779 45.833 0.00 0.00 43.05 2.29
3701 10692 5.623368 CGGCCTATAGCTCTATGAGGAAAAG 60.623 48.000 0.00 0.00 43.05 2.27
3702 10693 5.247337 GGCCTATAGCTCTATGAGGAAAAGT 59.753 44.000 0.00 0.00 43.05 2.66
3703 10694 6.437793 GGCCTATAGCTCTATGAGGAAAAGTA 59.562 42.308 0.00 0.00 43.05 2.24
3704 10695 7.125053 GGCCTATAGCTCTATGAGGAAAAGTAT 59.875 40.741 0.00 0.00 43.05 2.12
3705 10696 7.978975 GCCTATAGCTCTATGAGGAAAAGTATG 59.021 40.741 0.00 0.00 38.99 2.39
3706 10697 9.249053 CCTATAGCTCTATGAGGAAAAGTATGA 57.751 37.037 0.00 0.00 0.00 2.15
3708 10699 6.418057 AGCTCTATGAGGAAAAGTATGAGG 57.582 41.667 0.00 0.00 0.00 3.86
3709 10700 5.902431 AGCTCTATGAGGAAAAGTATGAGGT 59.098 40.000 0.00 0.00 0.00 3.85
3710 10701 6.385467 AGCTCTATGAGGAAAAGTATGAGGTT 59.615 38.462 0.00 0.00 0.00 3.50
3711 10702 7.565398 AGCTCTATGAGGAAAAGTATGAGGTTA 59.435 37.037 0.00 0.00 0.00 2.85
3712 10703 7.654116 GCTCTATGAGGAAAAGTATGAGGTTAC 59.346 40.741 0.00 0.00 0.00 2.50
3713 10704 8.840200 TCTATGAGGAAAAGTATGAGGTTACT 57.160 34.615 0.00 0.00 33.85 2.24
3714 10705 9.931698 TCTATGAGGAAAAGTATGAGGTTACTA 57.068 33.333 0.00 0.00 32.16 1.82
3716 10707 8.840200 ATGAGGAAAAGTATGAGGTTACTAGA 57.160 34.615 0.00 0.00 32.16 2.43
3717 10708 8.294954 TGAGGAAAAGTATGAGGTTACTAGAG 57.705 38.462 0.00 0.00 32.16 2.43
3718 10709 7.894364 TGAGGAAAAGTATGAGGTTACTAGAGT 59.106 37.037 0.00 0.00 32.16 3.24
3719 10710 8.667592 AGGAAAAGTATGAGGTTACTAGAGTT 57.332 34.615 0.00 0.00 32.16 3.01
3720 10711 9.765295 AGGAAAAGTATGAGGTTACTAGAGTTA 57.235 33.333 0.00 0.00 32.16 2.24
3721 10712 9.800433 GGAAAAGTATGAGGTTACTAGAGTTAC 57.200 37.037 0.00 0.00 32.16 2.50
3722 10713 9.500864 GAAAAGTATGAGGTTACTAGAGTTACG 57.499 37.037 0.00 0.00 32.16 3.18
3723 10714 8.572855 AAAGTATGAGGTTACTAGAGTTACGT 57.427 34.615 0.00 0.00 32.16 3.57
3724 10715 7.551035 AGTATGAGGTTACTAGAGTTACGTG 57.449 40.000 0.00 0.00 30.65 4.49
3725 10716 7.334090 AGTATGAGGTTACTAGAGTTACGTGA 58.666 38.462 0.00 0.00 30.65 4.35
3726 10717 7.826252 AGTATGAGGTTACTAGAGTTACGTGAA 59.174 37.037 0.00 0.00 30.65 3.18
3727 10718 6.882610 TGAGGTTACTAGAGTTACGTGAAA 57.117 37.500 0.00 0.00 0.00 2.69
3728 10719 7.275888 TGAGGTTACTAGAGTTACGTGAAAA 57.724 36.000 0.00 0.00 0.00 2.29
3729 10720 7.889469 TGAGGTTACTAGAGTTACGTGAAAAT 58.111 34.615 0.00 0.00 0.00 1.82
3730 10721 9.013229 TGAGGTTACTAGAGTTACGTGAAAATA 57.987 33.333 0.00 0.00 0.00 1.40
3733 10724 9.793252 GGTTACTAGAGTTACGTGAAAATATCA 57.207 33.333 0.00 0.00 35.05 2.15
3737 10728 9.175312 ACTAGAGTTACGTGAAAATATCAGAGA 57.825 33.333 0.00 0.00 39.19 3.10
3746 10737 8.345565 ACGTGAAAATATCAGAGATAATTTGCC 58.654 33.333 5.14 0.00 39.19 4.52
3747 10738 8.344831 CGTGAAAATATCAGAGATAATTTGCCA 58.655 33.333 5.14 0.00 39.19 4.92
3750 10741 9.136952 GAAAATATCAGAGATAATTTGCCATGC 57.863 33.333 5.14 0.00 0.00 4.06
3751 10742 8.418597 AAATATCAGAGATAATTTGCCATGCT 57.581 30.769 0.00 0.00 0.00 3.79
3752 10743 9.524496 AAATATCAGAGATAATTTGCCATGCTA 57.476 29.630 0.00 0.00 0.00 3.49
3753 10744 6.814506 ATCAGAGATAATTTGCCATGCTAC 57.185 37.500 0.00 0.00 0.00 3.58
3754 10745 5.933617 TCAGAGATAATTTGCCATGCTACT 58.066 37.500 0.00 0.00 0.00 2.57
3755 10746 5.761726 TCAGAGATAATTTGCCATGCTACTG 59.238 40.000 0.00 0.00 0.00 2.74
3756 10747 5.761726 CAGAGATAATTTGCCATGCTACTGA 59.238 40.000 0.00 0.00 0.00 3.41
3757 10748 6.261603 CAGAGATAATTTGCCATGCTACTGAA 59.738 38.462 0.00 0.00 0.00 3.02
3758 10749 6.485984 AGAGATAATTTGCCATGCTACTGAAG 59.514 38.462 0.00 0.00 0.00 3.02
3759 10750 6.359804 AGATAATTTGCCATGCTACTGAAGA 58.640 36.000 0.00 0.00 0.00 2.87
3760 10751 4.978083 AATTTGCCATGCTACTGAAGAG 57.022 40.909 0.00 0.00 0.00 2.85
3761 10752 3.701205 TTTGCCATGCTACTGAAGAGA 57.299 42.857 0.00 0.00 0.00 3.10
3762 10753 3.701205 TTGCCATGCTACTGAAGAGAA 57.299 42.857 0.00 0.00 0.00 2.87
3763 10754 3.257469 TGCCATGCTACTGAAGAGAAG 57.743 47.619 0.00 0.00 0.00 2.85
3764 10755 1.939255 GCCATGCTACTGAAGAGAAGC 59.061 52.381 0.00 0.00 35.51 3.86
3765 10756 2.559440 CCATGCTACTGAAGAGAAGCC 58.441 52.381 0.00 0.00 33.99 4.35
3766 10757 2.200067 CATGCTACTGAAGAGAAGCCG 58.800 52.381 0.00 0.00 33.99 5.52
3767 10758 1.257743 TGCTACTGAAGAGAAGCCGT 58.742 50.000 0.00 0.00 33.99 5.68
3768 10759 2.443416 TGCTACTGAAGAGAAGCCGTA 58.557 47.619 0.00 0.00 33.99 4.02
3769 10760 2.163815 TGCTACTGAAGAGAAGCCGTAC 59.836 50.000 0.00 0.00 33.99 3.67
3770 10761 2.163815 GCTACTGAAGAGAAGCCGTACA 59.836 50.000 0.00 0.00 0.00 2.90
3771 10762 3.367087 GCTACTGAAGAGAAGCCGTACAA 60.367 47.826 0.00 0.00 0.00 2.41
3772 10763 3.963428 ACTGAAGAGAAGCCGTACAAT 57.037 42.857 0.00 0.00 0.00 2.71
3773 10764 5.450137 GCTACTGAAGAGAAGCCGTACAATA 60.450 44.000 0.00 0.00 0.00 1.90
3774 10765 5.401531 ACTGAAGAGAAGCCGTACAATAA 57.598 39.130 0.00 0.00 0.00 1.40
3775 10766 5.169295 ACTGAAGAGAAGCCGTACAATAAC 58.831 41.667 0.00 0.00 0.00 1.89
3776 10767 5.047235 ACTGAAGAGAAGCCGTACAATAACT 60.047 40.000 0.00 0.00 0.00 2.24
3777 10768 6.152323 ACTGAAGAGAAGCCGTACAATAACTA 59.848 38.462 0.00 0.00 0.00 2.24
3778 10769 7.108841 TGAAGAGAAGCCGTACAATAACTAT 57.891 36.000 0.00 0.00 0.00 2.12
3779 10770 6.978659 TGAAGAGAAGCCGTACAATAACTATG 59.021 38.462 0.00 0.00 0.00 2.23
3780 10771 6.710597 AGAGAAGCCGTACAATAACTATGA 57.289 37.500 0.00 0.00 0.00 2.15
3781 10772 6.740110 AGAGAAGCCGTACAATAACTATGAG 58.260 40.000 0.00 0.00 0.00 2.90
3782 10773 5.844004 AGAAGCCGTACAATAACTATGAGG 58.156 41.667 0.00 0.00 0.00 3.86
3783 10774 5.363005 AGAAGCCGTACAATAACTATGAGGT 59.637 40.000 0.00 0.00 0.00 3.85
3784 10775 5.609533 AGCCGTACAATAACTATGAGGTT 57.390 39.130 0.00 0.00 0.00 3.50
3785 10776 6.720112 AGCCGTACAATAACTATGAGGTTA 57.280 37.500 0.00 0.00 36.33 2.85
3786 10777 6.510536 AGCCGTACAATAACTATGAGGTTAC 58.489 40.000 0.00 0.00 34.98 2.50
3787 10778 6.323225 AGCCGTACAATAACTATGAGGTTACT 59.677 38.462 0.00 0.00 34.98 2.24
3788 10779 6.420008 GCCGTACAATAACTATGAGGTTACTG 59.580 42.308 0.00 0.00 35.75 2.74
3789 10780 6.921857 CCGTACAATAACTATGAGGTTACTGG 59.078 42.308 0.00 0.00 34.49 4.00
3790 10781 7.201848 CCGTACAATAACTATGAGGTTACTGGA 60.202 40.741 0.00 0.00 34.49 3.86
3791 10782 7.861372 CGTACAATAACTATGAGGTTACTGGAG 59.139 40.741 0.00 0.00 34.49 3.86
3792 10783 7.735326 ACAATAACTATGAGGTTACTGGAGT 57.265 36.000 0.00 0.00 34.49 3.85
3793 10784 8.147244 ACAATAACTATGAGGTTACTGGAGTT 57.853 34.615 0.00 0.00 34.49 3.01
3794 10785 9.263446 ACAATAACTATGAGGTTACTGGAGTTA 57.737 33.333 0.00 0.00 34.49 2.24
3795 10786 9.530633 CAATAACTATGAGGTTACTGGAGTTAC 57.469 37.037 0.00 0.00 34.98 2.50
3796 10787 5.831702 ACTATGAGGTTACTGGAGTTACG 57.168 43.478 0.00 0.00 0.00 3.18
3797 10788 5.259632 ACTATGAGGTTACTGGAGTTACGT 58.740 41.667 0.00 0.00 0.00 3.57
3798 10789 3.928727 TGAGGTTACTGGAGTTACGTG 57.071 47.619 0.00 0.00 0.00 4.49
3799 10790 3.489355 TGAGGTTACTGGAGTTACGTGA 58.511 45.455 0.00 0.00 0.00 4.35
3800 10791 3.890756 TGAGGTTACTGGAGTTACGTGAA 59.109 43.478 0.00 0.00 0.00 3.18
3801 10792 4.341806 TGAGGTTACTGGAGTTACGTGAAA 59.658 41.667 0.00 0.00 0.00 2.69
3802 10793 5.163426 TGAGGTTACTGGAGTTACGTGAAAA 60.163 40.000 0.00 0.00 0.00 2.29
3803 10794 5.861727 AGGTTACTGGAGTTACGTGAAAAT 58.138 37.500 0.00 0.00 0.00 1.82
3804 10795 6.996509 AGGTTACTGGAGTTACGTGAAAATA 58.003 36.000 0.00 0.00 0.00 1.40
3805 10796 7.618137 AGGTTACTGGAGTTACGTGAAAATAT 58.382 34.615 0.00 0.00 0.00 1.28
3806 10797 7.763071 AGGTTACTGGAGTTACGTGAAAATATC 59.237 37.037 0.00 0.00 0.00 1.63
3807 10798 7.546667 GGTTACTGGAGTTACGTGAAAATATCA 59.453 37.037 0.00 0.00 35.05 2.15
3808 10799 8.592998 GTTACTGGAGTTACGTGAAAATATCAG 58.407 37.037 0.00 0.00 39.19 2.90
3809 10800 6.931838 ACTGGAGTTACGTGAAAATATCAGA 58.068 36.000 0.00 0.00 39.19 3.27
3810 10801 7.036220 ACTGGAGTTACGTGAAAATATCAGAG 58.964 38.462 0.00 0.00 39.19 3.35
3811 10802 7.093902 ACTGGAGTTACGTGAAAATATCAGAGA 60.094 37.037 0.00 0.00 39.19 3.10
3812 10803 7.782049 TGGAGTTACGTGAAAATATCAGAGAT 58.218 34.615 0.00 0.00 39.19 2.75
3813 10804 8.909923 TGGAGTTACGTGAAAATATCAGAGATA 58.090 33.333 0.00 0.00 39.19 1.98
3814 10805 9.745880 GGAGTTACGTGAAAATATCAGAGATAA 57.254 33.333 0.00 0.00 39.19 1.75
3846 10837 9.904198 ATTTTTATTTGGGAATATTGACAAGGG 57.096 29.630 0.00 0.00 0.00 3.95
3847 10838 6.478512 TTATTTGGGAATATTGACAAGGGC 57.521 37.500 0.00 0.00 0.00 5.19
3848 10839 3.464720 TTGGGAATATTGACAAGGGCA 57.535 42.857 0.00 0.00 0.00 5.36
3849 10840 3.686227 TGGGAATATTGACAAGGGCAT 57.314 42.857 0.00 0.00 0.00 4.40
3850 10841 3.992999 TGGGAATATTGACAAGGGCATT 58.007 40.909 0.00 0.00 0.00 3.56
3851 10842 3.705579 TGGGAATATTGACAAGGGCATTG 59.294 43.478 10.78 10.78 45.01 2.82
3852 10843 3.493176 GGGAATATTGACAAGGGCATTGC 60.493 47.826 12.40 0.00 43.15 3.56
3864 10855 3.422122 GCATTGCCAAATCAAGCGA 57.578 47.368 0.00 0.00 0.00 4.93
3865 10856 1.274596 GCATTGCCAAATCAAGCGAG 58.725 50.000 0.00 0.00 0.00 5.03
3866 10857 1.403249 GCATTGCCAAATCAAGCGAGT 60.403 47.619 0.00 0.00 0.00 4.18
3867 10858 2.256174 CATTGCCAAATCAAGCGAGTG 58.744 47.619 0.00 0.00 0.00 3.51
3868 10859 1.317613 TTGCCAAATCAAGCGAGTGT 58.682 45.000 0.00 0.00 0.00 3.55
3869 10860 2.177394 TGCCAAATCAAGCGAGTGTA 57.823 45.000 0.00 0.00 0.00 2.90
3870 10861 2.499197 TGCCAAATCAAGCGAGTGTAA 58.501 42.857 0.00 0.00 0.00 2.41
3871 10862 2.225491 TGCCAAATCAAGCGAGTGTAAC 59.775 45.455 0.00 0.00 0.00 2.50
3896 10887 9.908152 ACTACAAATAGTAATTGCTTTGTTTCC 57.092 29.630 15.76 0.00 40.02 3.13
3897 10888 9.353999 CTACAAATAGTAATTGCTTTGTTTCCC 57.646 33.333 15.76 0.00 40.95 3.97
3904 10895 5.612725 AATTGCTTTGTTTCCCAGAAGAA 57.387 34.783 0.00 0.00 0.00 2.52
3911 10902 5.835113 TTGTTTCCCAGAAGAAAAGACTG 57.165 39.130 0.00 0.00 37.49 3.51
3912 10903 5.110814 TGTTTCCCAGAAGAAAAGACTGA 57.889 39.130 0.00 0.00 37.49 3.41
3915 10906 3.318313 TCCCAGAAGAAAAGACTGACCT 58.682 45.455 0.00 0.00 34.07 3.85
3926 10917 5.836821 AAAGACTGACCTTTTCTTGAACC 57.163 39.130 0.00 0.00 32.89 3.62
3930 10921 3.377172 ACTGACCTTTTCTTGAACCGTTG 59.623 43.478 0.00 0.00 0.00 4.10
3961 10952 6.375455 ACCACCTAAATTGATCACATTCAGAC 59.625 38.462 0.00 0.00 0.00 3.51
3968 10959 7.621428 AATTGATCACATTCAGACAGTAAGG 57.379 36.000 0.00 0.00 0.00 2.69
3975 10966 4.755123 ACATTCAGACAGTAAGGAAAACCG 59.245 41.667 0.00 0.00 0.00 4.44
3985 10976 3.909776 AAGGAAAACCGGATCGAAAAC 57.090 42.857 9.46 0.00 0.00 2.43
3990 10981 1.530323 AACCGGATCGAAAACCTTGG 58.470 50.000 9.46 0.00 0.00 3.61
3994 10985 1.460504 GGATCGAAAACCTTGGTCCC 58.539 55.000 0.00 0.00 0.00 4.46
3995 10986 1.004394 GGATCGAAAACCTTGGTCCCT 59.996 52.381 0.00 0.00 0.00 4.20
4104 11095 8.200792 ACACCACAAACATATTTACAACACAAT 58.799 29.630 0.00 0.00 0.00 2.71
4106 11097 7.170658 ACCACAAACATATTTACAACACAATGC 59.829 33.333 0.00 0.00 0.00 3.56
4115 11106 3.883830 ACAACACAATGCAGAAAACCA 57.116 38.095 0.00 0.00 0.00 3.67
4139 11130 1.646447 ACTAGAGGACAGGTGGATGGA 59.354 52.381 0.00 0.00 0.00 3.41
4141 11132 0.415429 AGAGGACAGGTGGATGGAGT 59.585 55.000 0.00 0.00 0.00 3.85
4149 11140 1.834263 AGGTGGATGGAGTAGCAGAAC 59.166 52.381 0.00 0.00 0.00 3.01
4155 11146 4.962362 TGGATGGAGTAGCAGAACAGATTA 59.038 41.667 0.00 0.00 0.00 1.75
4162 11153 6.989169 GGAGTAGCAGAACAGATTAATGATGT 59.011 38.462 0.00 0.00 0.00 3.06
4171 11162 7.566879 AGAACAGATTAATGATGTACTCCCTCT 59.433 37.037 0.00 0.00 0.00 3.69
4172 11163 8.783660 AACAGATTAATGATGTACTCCCTCTA 57.216 34.615 0.00 0.00 0.00 2.43
4211 11203 9.601217 AGAGCGTTAATGATCTAAACATTTAGT 57.399 29.630 13.67 0.31 40.69 2.24
4212 11204 9.638300 GAGCGTTAATGATCTAAACATTTAGTG 57.362 33.333 5.68 0.00 40.69 2.74
4213 11205 9.378551 AGCGTTAATGATCTAAACATTTAGTGA 57.621 29.630 10.43 0.00 40.69 3.41
4434 11426 4.445019 GGTGAACTTGGTCTTCTCCTTCTT 60.445 45.833 0.00 0.00 31.34 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 4.924305 AATCATGGGGTGATCGAAATTG 57.076 40.909 0.00 0.00 46.80 2.32
62 63 3.600388 AGCAATTCCTTTCTAGGTGTCG 58.400 45.455 0.00 0.00 42.60 4.35
64 65 5.721960 TCTCTAGCAATTCCTTTCTAGGTGT 59.278 40.000 0.00 0.00 42.60 4.16
195 196 8.358148 ACGATTTTCTTATACATGATAGACGGT 58.642 33.333 0.00 0.00 0.00 4.83
197 198 9.995379 CAACGATTTTCTTATACATGATAGACG 57.005 33.333 0.00 0.00 0.00 4.18
234 235 4.798882 AGGGGCGATGTCCATTTTATTAA 58.201 39.130 0.00 0.00 0.00 1.40
251 252 2.105477 TGATGATGCTTCTCTTAGGGGC 59.895 50.000 0.88 0.00 0.00 5.80
328 329 8.790718 CCTATTTTCATCCATCTTATGAACCAG 58.209 37.037 0.00 0.00 41.73 4.00
391 392 6.432472 AGGGCTTGACAAATTCTCTAAAAGAG 59.568 38.462 0.00 0.00 43.64 2.85
409 411 2.097825 CTCAAATGGAGGAAGGGCTTG 58.902 52.381 0.00 0.00 40.13 4.01
410 412 1.995542 TCTCAAATGGAGGAAGGGCTT 59.004 47.619 0.00 0.00 44.19 4.35
413 415 3.350833 CTTGTCTCAAATGGAGGAAGGG 58.649 50.000 0.00 0.00 44.19 3.95
437 439 8.965986 AAAGGAATTTAGAAGCAATCGTTAAC 57.034 30.769 0.00 0.00 0.00 2.01
466 468 7.704472 TGCTTCTTTTTACATACAAACAACTGG 59.296 33.333 0.00 0.00 0.00 4.00
467 469 8.627487 TGCTTCTTTTTACATACAAACAACTG 57.373 30.769 0.00 0.00 0.00 3.16
486 488 8.103305 TCATAGGTTAGTTCTCAAATTGCTTCT 58.897 33.333 0.00 0.00 0.00 2.85
489 491 8.680903 CAATCATAGGTTAGTTCTCAAATTGCT 58.319 33.333 0.00 0.00 0.00 3.91
503 505 5.223655 TCCTCACCATCCAATCATAGGTTA 58.776 41.667 0.00 0.00 0.00 2.85
547 549 2.102578 GATTTGATCCTTGGTGGGGTG 58.897 52.381 0.00 0.00 36.20 4.61
548 550 1.715931 TGATTTGATCCTTGGTGGGGT 59.284 47.619 0.00 0.00 36.20 4.95
549 551 2.530460 TGATTTGATCCTTGGTGGGG 57.470 50.000 0.00 0.00 36.20 4.96
550 552 5.052693 TCTATGATTTGATCCTTGGTGGG 57.947 43.478 0.00 0.00 36.20 4.61
551 553 7.069085 ACAAATCTATGATTTGATCCTTGGTGG 59.931 37.037 28.61 7.95 40.42 4.61
554 556 8.229253 TGACAAATCTATGATTTGATCCTTGG 57.771 34.615 28.61 9.40 40.42 3.61
621 623 5.586243 CACTGGGTATCGATGAAAACATCTT 59.414 40.000 8.54 0.00 0.00 2.40
622 624 5.118990 CACTGGGTATCGATGAAAACATCT 58.881 41.667 8.54 0.00 0.00 2.90
677 679 4.065088 GCACCTGTGTGAGATTAAGTCAA 58.935 43.478 0.00 0.00 45.76 3.18
692 694 3.384168 TCTTACCCATATGAGCACCTGT 58.616 45.455 3.65 0.00 0.00 4.00
715 717 8.947055 TTATATATATGAAGACATGCGTGCAT 57.053 30.769 5.64 0.51 37.87 3.96
739 741 7.283807 AGACATCACATACATGCACATACATTT 59.716 33.333 0.00 0.00 0.00 2.32
741 743 6.293698 AGACATCACATACATGCACATACAT 58.706 36.000 0.00 0.00 0.00 2.29
846 853 1.068748 TGAGTAAACGAGTGACGAGGC 60.069 52.381 0.00 0.00 45.77 4.70
848 855 3.227147 CAGTGAGTAAACGAGTGACGAG 58.773 50.000 0.00 0.00 45.77 4.18
849 856 2.603892 GCAGTGAGTAAACGAGTGACGA 60.604 50.000 0.00 0.00 45.77 4.20
851 858 2.059541 GGCAGTGAGTAAACGAGTGAC 58.940 52.381 0.00 0.00 0.00 3.67
852 859 1.335597 CGGCAGTGAGTAAACGAGTGA 60.336 52.381 0.00 0.00 0.00 3.41
853 860 1.060713 CGGCAGTGAGTAAACGAGTG 58.939 55.000 0.00 0.00 0.00 3.51
854 861 0.672342 ACGGCAGTGAGTAAACGAGT 59.328 50.000 0.00 0.00 0.00 4.18
855 862 1.337821 GACGGCAGTGAGTAAACGAG 58.662 55.000 0.00 0.00 0.00 4.18
856 863 0.038892 GGACGGCAGTGAGTAAACGA 60.039 55.000 0.00 0.00 0.00 3.85
1151 2463 2.060980 GGTGTGGCGGAGGATCTCT 61.061 63.158 0.00 0.00 33.73 3.10
1373 2686 7.535997 AGTTCAAAACTACCTTGAGTGAAAAC 58.464 34.615 0.00 0.00 40.69 2.43
1470 4242 2.824341 AGTTCTCCAACCCACTAGTACG 59.176 50.000 0.00 0.00 32.22 3.67
1590 4388 8.906867 CAAATGGTACCATTCATCACTAAATCT 58.093 33.333 34.67 15.52 44.86 2.40
1677 4732 1.003545 CGCTACAATCCAAAGCATCCG 60.004 52.381 0.00 0.00 35.98 4.18
1774 4961 1.153289 CTCACGAATGGCTGAGGGG 60.153 63.158 0.00 0.00 31.80 4.79
1890 5079 6.043127 TGCTTGATGATGAATAGTAAGGCCTA 59.957 38.462 5.16 0.00 0.00 3.93
1939 5128 1.649271 GGGTCCATGGCAGGAGGATT 61.649 60.000 6.96 0.00 38.64 3.01
1948 5137 0.329596 AACTTCTCAGGGTCCATGGC 59.670 55.000 6.96 1.78 0.00 4.40
2035 5225 5.440685 GTGAGAACAACATGTCTTTAACGG 58.559 41.667 0.00 0.00 0.00 4.44
2045 5235 4.520111 TCCATGAAAGGTGAGAACAACATG 59.480 41.667 0.00 0.00 35.97 3.21
2093 5284 5.387113 TCACCAATATAGTCCCAGCAATT 57.613 39.130 0.00 0.00 0.00 2.32
2145 5336 1.999735 CAACTGAAGCTTATTCGCCGA 59.000 47.619 0.00 0.00 0.00 5.54
2227 5452 9.391006 GGAAAGTATACTTTTGTCCATACATCA 57.609 33.333 27.27 0.00 45.37 3.07
2228 5453 9.391006 TGGAAAGTATACTTTTGTCCATACATC 57.609 33.333 27.27 12.88 45.37 3.06
2229 5454 9.174166 GTGGAAAGTATACTTTTGTCCATACAT 57.826 33.333 28.17 8.67 45.37 2.29
2230 5455 7.608761 GGTGGAAAGTATACTTTTGTCCATACA 59.391 37.037 28.17 13.84 45.37 2.29
2231 5456 7.827729 AGGTGGAAAGTATACTTTTGTCCATAC 59.172 37.037 28.17 24.24 45.37 2.39
2232 5457 7.924541 AGGTGGAAAGTATACTTTTGTCCATA 58.075 34.615 28.17 12.89 45.37 2.74
2233 5458 6.790319 AGGTGGAAAGTATACTTTTGTCCAT 58.210 36.000 28.17 17.29 45.37 3.41
2234 5459 6.195600 AGGTGGAAAGTATACTTTTGTCCA 57.804 37.500 27.27 25.71 45.37 4.02
2235 5460 6.713450 TGAAGGTGGAAAGTATACTTTTGTCC 59.287 38.462 27.27 23.83 45.37 4.02
2236 5461 7.739498 TGAAGGTGGAAAGTATACTTTTGTC 57.261 36.000 27.27 20.13 45.37 3.18
2237 5462 7.996644 TCTTGAAGGTGGAAAGTATACTTTTGT 59.003 33.333 27.27 9.84 45.37 2.83
2238 5463 8.391075 TCTTGAAGGTGGAAAGTATACTTTTG 57.609 34.615 27.27 10.82 45.37 2.44
2239 5464 8.990163 TTCTTGAAGGTGGAAAGTATACTTTT 57.010 30.769 27.27 13.59 45.37 2.27
2326 5680 7.881775 AAATCTCAAACAAGACAGGTAAAGT 57.118 32.000 0.00 0.00 0.00 2.66
2492 6306 6.007076 TGGACAACTATGCCAATGACTAAAA 58.993 36.000 0.00 0.00 32.25 1.52
2551 6372 3.890756 TGAACAATGATGACATATGGCCC 59.109 43.478 5.99 0.00 35.50 5.80
2552 6373 4.338964 TGTGAACAATGATGACATATGGCC 59.661 41.667 5.99 0.00 35.50 5.36
2596 6433 5.772521 ACTGGCAAGCAAGTAATGTTAAAG 58.227 37.500 0.00 0.00 0.00 1.85
2647 6486 2.664402 AACCCACATCACTTGAGCTT 57.336 45.000 0.00 0.00 0.00 3.74
2649 6488 3.674997 TCTAAACCCACATCACTTGAGC 58.325 45.455 0.00 0.00 0.00 4.26
2650 6489 5.738909 AGATCTAAACCCACATCACTTGAG 58.261 41.667 0.00 0.00 0.00 3.02
2652 6491 6.644347 ACTAGATCTAAACCCACATCACTTG 58.356 40.000 3.57 0.00 0.00 3.16
2707 6599 3.573538 AGTGGTTAGTTCATTGCATGCAA 59.426 39.130 33.57 33.57 40.47 4.08
2709 6601 3.504863 CAGTGGTTAGTTCATTGCATGC 58.495 45.455 11.82 11.82 0.00 4.06
2711 6603 3.855689 GCAGTGGTTAGTTCATTGCAT 57.144 42.857 6.68 0.00 44.01 3.96
2713 6605 3.057315 ACATGCAGTGGTTAGTTCATTGC 60.057 43.478 0.00 4.92 44.56 3.56
2716 6608 4.019792 TGACATGCAGTGGTTAGTTCAT 57.980 40.909 0.00 0.00 0.00 2.57
2717 6609 3.483808 TGACATGCAGTGGTTAGTTCA 57.516 42.857 0.00 0.00 0.00 3.18
2718 6610 3.753272 ACATGACATGCAGTGGTTAGTTC 59.247 43.478 15.49 0.00 0.00 3.01
2719 6611 3.754965 ACATGACATGCAGTGGTTAGTT 58.245 40.909 15.49 0.00 0.00 2.24
2720 6612 3.423539 ACATGACATGCAGTGGTTAGT 57.576 42.857 15.49 0.00 0.00 2.24
2722 6614 3.255395 CCAAACATGACATGCAGTGGTTA 59.745 43.478 15.49 0.00 0.00 2.85
2723 6615 2.036217 CCAAACATGACATGCAGTGGTT 59.964 45.455 15.49 0.00 0.00 3.67
2726 6618 3.503363 ACTACCAAACATGACATGCAGTG 59.497 43.478 15.49 10.34 0.00 3.66
2727 6619 3.753272 GACTACCAAACATGACATGCAGT 59.247 43.478 15.49 9.80 0.00 4.40
2728 6620 4.005650 AGACTACCAAACATGACATGCAG 58.994 43.478 15.49 5.48 0.00 4.41
2731 6623 5.702670 ACTTGAGACTACCAAACATGACATG 59.297 40.000 14.02 14.02 0.00 3.21
2732 6624 5.869579 ACTTGAGACTACCAAACATGACAT 58.130 37.500 0.00 0.00 0.00 3.06
2734 6626 5.297547 TGACTTGAGACTACCAAACATGAC 58.702 41.667 0.00 0.00 0.00 3.06
2735 6627 5.545063 TGACTTGAGACTACCAAACATGA 57.455 39.130 0.00 0.00 0.00 3.07
2736 6628 6.427853 TCAATGACTTGAGACTACCAAACATG 59.572 38.462 0.00 0.00 36.46 3.21
2739 6631 6.861065 TTCAATGACTTGAGACTACCAAAC 57.139 37.500 0.00 0.00 42.19 2.93
2743 6635 4.997395 TGCTTTCAATGACTTGAGACTACC 59.003 41.667 0.00 0.00 42.19 3.18
2744 6636 6.541086 CATGCTTTCAATGACTTGAGACTAC 58.459 40.000 0.00 0.00 42.19 2.73
2745 6637 5.122869 GCATGCTTTCAATGACTTGAGACTA 59.877 40.000 11.37 0.00 42.19 2.59
2746 6638 4.082895 GCATGCTTTCAATGACTTGAGACT 60.083 41.667 11.37 0.00 42.19 3.24
2747 6639 4.164294 GCATGCTTTCAATGACTTGAGAC 58.836 43.478 11.37 0.00 42.19 3.36
2749 6641 4.168922 TGCATGCTTTCAATGACTTGAG 57.831 40.909 20.33 0.00 42.19 3.02
2750 6642 4.490743 CATGCATGCTTTCAATGACTTGA 58.509 39.130 20.33 0.00 39.62 3.02
2751 6643 3.616821 CCATGCATGCTTTCAATGACTTG 59.383 43.478 21.69 0.00 0.00 3.16
2752 6644 3.857052 CCATGCATGCTTTCAATGACTT 58.143 40.909 21.69 0.00 0.00 3.01
2753 6645 2.418197 GCCATGCATGCTTTCAATGACT 60.418 45.455 21.69 0.00 0.00 3.41
2754 6646 1.931172 GCCATGCATGCTTTCAATGAC 59.069 47.619 21.69 2.22 0.00 3.06
2755 6647 1.134640 GGCCATGCATGCTTTCAATGA 60.135 47.619 21.69 0.00 0.00 2.57
2756 6648 1.295792 GGCCATGCATGCTTTCAATG 58.704 50.000 21.69 13.22 0.00 2.82
2757 6649 0.179468 GGGCCATGCATGCTTTCAAT 59.821 50.000 21.69 0.00 0.00 2.57
2758 6650 1.192803 TGGGCCATGCATGCTTTCAA 61.193 50.000 21.69 0.00 0.00 2.69
2759 6651 1.609794 TGGGCCATGCATGCTTTCA 60.610 52.632 21.69 12.67 0.00 2.69
2761 6653 1.268992 ATGTGGGCCATGCATGCTTT 61.269 50.000 21.69 3.31 30.69 3.51
2763 6655 2.042333 ATGTGGGCCATGCATGCT 60.042 55.556 21.69 1.07 30.69 3.79
2764 6656 2.083835 GAGATGTGGGCCATGCATGC 62.084 60.000 21.69 11.82 32.56 4.06
2765 6657 0.467474 AGAGATGTGGGCCATGCATG 60.467 55.000 20.19 20.19 32.56 4.06
2767 6659 0.918258 TAAGAGATGTGGGCCATGCA 59.082 50.000 10.70 3.89 32.56 3.96
2768 6660 2.283145 ATAAGAGATGTGGGCCATGC 57.717 50.000 10.70 1.77 32.56 4.06
2769 6661 2.889045 CCAATAAGAGATGTGGGCCATG 59.111 50.000 10.70 0.00 32.56 3.66
2770 6662 2.515429 ACCAATAAGAGATGTGGGCCAT 59.485 45.455 10.70 0.00 35.32 4.40
2771 6663 1.922447 ACCAATAAGAGATGTGGGCCA 59.078 47.619 0.00 0.00 35.32 5.36
2773 6665 3.620488 TCAACCAATAAGAGATGTGGGC 58.380 45.455 0.00 0.00 35.32 5.36
2774 6666 7.000472 ACATATCAACCAATAAGAGATGTGGG 59.000 38.462 0.00 0.00 41.18 4.61
2775 6667 7.716560 TGACATATCAACCAATAAGAGATGTGG 59.283 37.037 6.64 0.00 42.33 4.17
2776 6668 8.554528 GTGACATATCAACCAATAAGAGATGTG 58.445 37.037 6.64 0.00 42.33 3.21
2777 6669 8.267183 TGTGACATATCAACCAATAAGAGATGT 58.733 33.333 0.00 0.00 44.20 3.06
2778 6670 8.667076 TGTGACATATCAACCAATAAGAGATG 57.333 34.615 0.00 0.00 36.31 2.90
2780 6672 9.513906 TTTTGTGACATATCAACCAATAAGAGA 57.486 29.630 0.00 0.00 36.31 3.10
2782 6674 9.072375 TGTTTTGTGACATATCAACCAATAAGA 57.928 29.630 0.00 0.00 36.31 2.10
2783 6675 9.689976 TTGTTTTGTGACATATCAACCAATAAG 57.310 29.630 0.00 0.00 36.31 1.73
2784 6676 9.689976 CTTGTTTTGTGACATATCAACCAATAA 57.310 29.630 0.00 0.00 36.31 1.40
2785 6677 9.072375 TCTTGTTTTGTGACATATCAACCAATA 57.928 29.630 0.00 0.00 36.31 1.90
2786 6678 7.950512 TCTTGTTTTGTGACATATCAACCAAT 58.049 30.769 0.00 0.00 36.31 3.16
2787 6679 7.340122 TCTTGTTTTGTGACATATCAACCAA 57.660 32.000 0.00 0.00 36.31 3.67
2788 6680 6.951062 TCTTGTTTTGTGACATATCAACCA 57.049 33.333 0.00 0.00 36.31 3.67
2789 6681 7.096640 CGTTTCTTGTTTTGTGACATATCAACC 60.097 37.037 0.00 0.00 36.31 3.77
2790 6682 7.642194 TCGTTTCTTGTTTTGTGACATATCAAC 59.358 33.333 0.00 0.00 36.31 3.18
2791 6683 7.698628 TCGTTTCTTGTTTTGTGACATATCAA 58.301 30.769 0.00 0.00 36.31 2.57
2792 6684 7.252965 TCGTTTCTTGTTTTGTGACATATCA 57.747 32.000 0.00 0.00 0.00 2.15
2793 6685 6.797033 CCTCGTTTCTTGTTTTGTGACATATC 59.203 38.462 0.00 0.00 0.00 1.63
2794 6686 6.485313 TCCTCGTTTCTTGTTTTGTGACATAT 59.515 34.615 0.00 0.00 0.00 1.78
2796 6688 4.638421 TCCTCGTTTCTTGTTTTGTGACAT 59.362 37.500 0.00 0.00 0.00 3.06
2798 6690 4.495844 CCTCCTCGTTTCTTGTTTTGTGAC 60.496 45.833 0.00 0.00 0.00 3.67
2800 6692 3.243068 CCCTCCTCGTTTCTTGTTTTGTG 60.243 47.826 0.00 0.00 0.00 3.33
2801 6693 2.949644 CCCTCCTCGTTTCTTGTTTTGT 59.050 45.455 0.00 0.00 0.00 2.83
2802 6694 3.211045 TCCCTCCTCGTTTCTTGTTTTG 58.789 45.455 0.00 0.00 0.00 2.44
2803 6695 3.118000 ACTCCCTCCTCGTTTCTTGTTTT 60.118 43.478 0.00 0.00 0.00 2.43
2805 6697 2.047830 ACTCCCTCCTCGTTTCTTGTT 58.952 47.619 0.00 0.00 0.00 2.83
2806 6698 1.718280 ACTCCCTCCTCGTTTCTTGT 58.282 50.000 0.00 0.00 0.00 3.16
2807 6699 2.841442 AACTCCCTCCTCGTTTCTTG 57.159 50.000 0.00 0.00 0.00 3.02
2810 6702 4.203654 ACATTAACTCCCTCCTCGTTTC 57.796 45.455 0.00 0.00 0.00 2.78
2811 6703 4.081254 GGTACATTAACTCCCTCCTCGTTT 60.081 45.833 0.00 0.00 0.00 3.60
2812 6704 3.450096 GGTACATTAACTCCCTCCTCGTT 59.550 47.826 0.00 0.00 0.00 3.85
2814 6706 2.034305 CGGTACATTAACTCCCTCCTCG 59.966 54.545 0.00 0.00 0.00 4.63
2815 6707 3.029570 ACGGTACATTAACTCCCTCCTC 58.970 50.000 0.00 0.00 0.00 3.71
2826 6751 6.539464 CCAAAATACTTAGGCACGGTACATTA 59.461 38.462 0.00 0.00 0.00 1.90
2827 6752 5.355910 CCAAAATACTTAGGCACGGTACATT 59.644 40.000 0.00 0.00 0.00 2.71
2828 6753 4.879545 CCAAAATACTTAGGCACGGTACAT 59.120 41.667 0.00 0.00 0.00 2.29
2829 6754 4.255301 CCAAAATACTTAGGCACGGTACA 58.745 43.478 0.00 0.00 0.00 2.90
2830 6755 3.624410 CCCAAAATACTTAGGCACGGTAC 59.376 47.826 0.00 0.00 0.00 3.34
2832 6757 2.306512 TCCCAAAATACTTAGGCACGGT 59.693 45.455 0.00 0.00 0.00 4.83
2833 6758 2.993937 TCCCAAAATACTTAGGCACGG 58.006 47.619 0.00 0.00 0.00 4.94
2834 6759 6.877611 ATAATCCCAAAATACTTAGGCACG 57.122 37.500 0.00 0.00 0.00 5.34
2835 6760 7.926018 CCAAATAATCCCAAAATACTTAGGCAC 59.074 37.037 0.00 0.00 0.00 5.01
2836 6761 7.621683 ACCAAATAATCCCAAAATACTTAGGCA 59.378 33.333 0.00 0.00 0.00 4.75
2837 6762 8.018537 ACCAAATAATCCCAAAATACTTAGGC 57.981 34.615 0.00 0.00 0.00 3.93
2841 6766 9.430623 CGAAAACCAAATAATCCCAAAATACTT 57.569 29.630 0.00 0.00 0.00 2.24
2843 6768 8.766000 ACGAAAACCAAATAATCCCAAAATAC 57.234 30.769 0.00 0.00 0.00 1.89
2845 6770 9.430623 CTTACGAAAACCAAATAATCCCAAAAT 57.569 29.630 0.00 0.00 0.00 1.82
2846 6771 7.873505 CCTTACGAAAACCAAATAATCCCAAAA 59.126 33.333 0.00 0.00 0.00 2.44
2847 6772 7.015389 ACCTTACGAAAACCAAATAATCCCAAA 59.985 33.333 0.00 0.00 0.00 3.28
2849 6774 6.011481 ACCTTACGAAAACCAAATAATCCCA 58.989 36.000 0.00 0.00 0.00 4.37
2850 6775 6.151480 TCACCTTACGAAAACCAAATAATCCC 59.849 38.462 0.00 0.00 0.00 3.85
2851 6776 7.025365 GTCACCTTACGAAAACCAAATAATCC 58.975 38.462 0.00 0.00 0.00 3.01
2852 6777 7.813645 AGTCACCTTACGAAAACCAAATAATC 58.186 34.615 0.00 0.00 0.00 1.75
2853 6778 7.754851 AGTCACCTTACGAAAACCAAATAAT 57.245 32.000 0.00 0.00 0.00 1.28
2856 6781 6.962686 GTAAGTCACCTTACGAAAACCAAAT 58.037 36.000 0.00 0.00 42.56 2.32
2857 6782 6.362210 GTAAGTCACCTTACGAAAACCAAA 57.638 37.500 0.00 0.00 42.56 3.28
2858 6783 5.989551 GTAAGTCACCTTACGAAAACCAA 57.010 39.130 0.00 0.00 42.56 3.67
2872 6797 2.816087 TCCGTCTAGGTGTGTAAGTCAC 59.184 50.000 0.00 0.00 42.20 3.67
2873 6798 3.079578 CTCCGTCTAGGTGTGTAAGTCA 58.920 50.000 0.00 0.00 41.99 3.41
2874 6799 2.422832 CCTCCGTCTAGGTGTGTAAGTC 59.577 54.545 0.00 0.00 41.99 3.01
2878 6803 0.994247 TCCCTCCGTCTAGGTGTGTA 59.006 55.000 0.00 0.00 41.99 2.90
2880 6805 0.323542 ACTCCCTCCGTCTAGGTGTG 60.324 60.000 0.00 0.00 41.99 3.82
2881 6806 1.212441 CTACTCCCTCCGTCTAGGTGT 59.788 57.143 0.00 0.00 41.99 4.16
2882 6807 1.212441 ACTACTCCCTCCGTCTAGGTG 59.788 57.143 0.00 0.00 41.99 4.00
2883 6808 1.594129 ACTACTCCCTCCGTCTAGGT 58.406 55.000 0.00 0.00 41.99 3.08
2885 6810 4.705991 AGAAAAACTACTCCCTCCGTCTAG 59.294 45.833 0.00 0.00 0.00 2.43
2886 6811 4.670765 AGAAAAACTACTCCCTCCGTCTA 58.329 43.478 0.00 0.00 0.00 2.59
2887 6812 3.508426 AGAAAAACTACTCCCTCCGTCT 58.492 45.455 0.00 0.00 0.00 4.18
2888 6813 3.957591 AGAAAAACTACTCCCTCCGTC 57.042 47.619 0.00 0.00 0.00 4.79
2889 6814 5.541484 TCTTAAGAAAAACTACTCCCTCCGT 59.459 40.000 1.68 0.00 0.00 4.69
2890 6815 6.034161 TCTTAAGAAAAACTACTCCCTCCG 57.966 41.667 1.68 0.00 0.00 4.63
2891 6816 6.316640 GCATCTTAAGAAAAACTACTCCCTCC 59.683 42.308 9.71 0.00 0.00 4.30
2892 6817 6.879458 TGCATCTTAAGAAAAACTACTCCCTC 59.121 38.462 9.71 0.00 0.00 4.30
2893 6818 6.779860 TGCATCTTAAGAAAAACTACTCCCT 58.220 36.000 9.71 0.00 0.00 4.20
2895 6820 7.015877 CGTTGCATCTTAAGAAAAACTACTCC 58.984 38.462 9.71 0.00 0.00 3.85
2896 6821 7.740781 GTCGTTGCATCTTAAGAAAAACTACTC 59.259 37.037 9.71 2.65 0.00 2.59
2897 6822 7.225931 TGTCGTTGCATCTTAAGAAAAACTACT 59.774 33.333 20.85 1.65 0.00 2.57
2948 6873 1.731720 GTTGTGAGATGGAGCAGGTC 58.268 55.000 0.00 0.00 0.00 3.85
2967 6892 7.114670 TGCATTGTTATCTTGATTGTTTGAACG 59.885 33.333 0.00 0.00 0.00 3.95
3015 6940 9.818270 ATCCTATCATATTGAATCACCACAAAT 57.182 29.630 0.00 0.00 0.00 2.32
3056 7151 4.978083 AAAAGGATGCTCACATGATCAC 57.022 40.909 0.00 0.00 36.35 3.06
3057 7152 7.394077 TCTTTTAAAAGGATGCTCACATGATCA 59.606 33.333 24.20 0.00 36.67 2.92
3058 7153 7.699812 GTCTTTTAAAAGGATGCTCACATGATC 59.300 37.037 24.20 0.00 36.67 2.92
3059 7154 7.177216 TGTCTTTTAAAAGGATGCTCACATGAT 59.823 33.333 24.20 0.00 36.67 2.45
3060 7155 6.489700 TGTCTTTTAAAAGGATGCTCACATGA 59.510 34.615 24.20 1.55 36.67 3.07
3061 7156 6.680810 TGTCTTTTAAAAGGATGCTCACATG 58.319 36.000 24.20 0.00 36.67 3.21
3062 7157 6.899393 TGTCTTTTAAAAGGATGCTCACAT 57.101 33.333 24.20 0.00 36.67 3.21
3063 7158 6.707440 TTGTCTTTTAAAAGGATGCTCACA 57.293 33.333 24.20 16.90 36.67 3.58
3076 7171 8.902806 TCTCTTTTCTTGCTCATTGTCTTTTAA 58.097 29.630 0.00 0.00 0.00 1.52
3077 7172 8.450578 TCTCTTTTCTTGCTCATTGTCTTTTA 57.549 30.769 0.00 0.00 0.00 1.52
3078 7173 7.338800 TCTCTTTTCTTGCTCATTGTCTTTT 57.661 32.000 0.00 0.00 0.00 2.27
3082 7177 5.413833 TCCATCTCTTTTCTTGCTCATTGTC 59.586 40.000 0.00 0.00 0.00 3.18
3204 7317 4.631813 GGAGCTAGTTGTACTTTGACCATG 59.368 45.833 0.00 0.00 0.00 3.66
3286 7425 8.132362 ACTAGAGTTAGATCAACGCTCAAATAG 58.868 37.037 14.15 10.11 42.90 1.73
3300 7439 9.487442 AGGAATCAGAAGAAACTAGAGTTAGAT 57.513 33.333 0.00 0.00 37.25 1.98
3310 7449 8.519799 TTTTGTAACAGGAATCAGAAGAAACT 57.480 30.769 0.00 0.00 0.00 2.66
3380 7524 2.746279 TGTAATGCCATTTCCGGGAT 57.254 45.000 0.00 0.00 39.05 3.85
3386 7530 4.314121 TGTTGCCTTTGTAATGCCATTTC 58.686 39.130 0.00 0.00 0.00 2.17
3454 7598 2.098607 AGACGCGCATTAGCACTAAGTA 59.901 45.455 5.73 0.00 42.27 2.24
3468 7612 2.744787 ATTGATCAATTCAGACGCGC 57.255 45.000 15.36 0.00 35.27 6.86
3517 7691 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
3518 7692 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
3519 7693 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
3520 7694 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
3521 7695 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
3522 7696 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
3523 7697 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
3524 7698 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
3525 7699 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
3526 7700 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
3527 7701 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
3528 7702 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
3529 7703 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
3530 7704 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
3531 7705 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
3532 7706 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
3533 7707 5.006746 GGAACAACAACAACAACAACAACAA 59.993 36.000 0.00 0.00 0.00 2.83
3534 7708 4.508124 GGAACAACAACAACAACAACAACA 59.492 37.500 0.00 0.00 0.00 3.33
3535 7709 4.747605 AGGAACAACAACAACAACAACAAC 59.252 37.500 0.00 0.00 0.00 3.32
3536 7710 4.950050 AGGAACAACAACAACAACAACAA 58.050 34.783 0.00 0.00 0.00 2.83
3537 7711 4.038042 TGAGGAACAACAACAACAACAACA 59.962 37.500 0.00 0.00 0.00 3.33
3538 7712 4.384547 GTGAGGAACAACAACAACAACAAC 59.615 41.667 0.00 0.00 0.00 3.32
3539 7713 4.279671 AGTGAGGAACAACAACAACAACAA 59.720 37.500 0.00 0.00 0.00 2.83
3540 7714 3.823873 AGTGAGGAACAACAACAACAACA 59.176 39.130 0.00 0.00 0.00 3.33
3557 7731 6.354039 AGGTAAACACGTAAAACAAGTGAG 57.646 37.500 1.63 0.00 38.76 3.51
3558 7732 6.149142 ACAAGGTAAACACGTAAAACAAGTGA 59.851 34.615 1.63 0.00 38.76 3.41
3559 7733 6.316319 ACAAGGTAAACACGTAAAACAAGTG 58.684 36.000 0.00 0.00 41.80 3.16
3560 7734 6.372381 AGACAAGGTAAACACGTAAAACAAGT 59.628 34.615 0.00 0.00 0.00 3.16
3561 7735 6.778108 AGACAAGGTAAACACGTAAAACAAG 58.222 36.000 0.00 0.00 0.00 3.16
3562 7736 6.740411 AGACAAGGTAAACACGTAAAACAA 57.260 33.333 0.00 0.00 0.00 2.83
3563 7737 9.709495 ATATAGACAAGGTAAACACGTAAAACA 57.291 29.630 0.00 0.00 0.00 2.83
3564 7738 9.962759 CATATAGACAAGGTAAACACGTAAAAC 57.037 33.333 0.00 0.00 0.00 2.43
3565 7739 8.658609 GCATATAGACAAGGTAAACACGTAAAA 58.341 33.333 0.00 0.00 0.00 1.52
3566 7740 7.009448 CGCATATAGACAAGGTAAACACGTAAA 59.991 37.037 0.00 0.00 0.00 2.01
3568 7742 5.972973 CGCATATAGACAAGGTAAACACGTA 59.027 40.000 0.00 0.00 0.00 3.57
3569 7743 4.802039 CGCATATAGACAAGGTAAACACGT 59.198 41.667 0.00 0.00 0.00 4.49
3571 7745 4.569162 TGCGCATATAGACAAGGTAAACAC 59.431 41.667 5.66 0.00 0.00 3.32
3572 7746 4.760878 TGCGCATATAGACAAGGTAAACA 58.239 39.130 5.66 0.00 0.00 2.83
3591 7823 4.201724 GCTTCCTTGTAATCTTACACTGCG 60.202 45.833 2.33 0.00 42.84 5.18
3615 7847 6.080969 TGGGTAATACATGTACATGGGTTT 57.919 37.500 33.32 24.89 42.91 3.27
3616 7848 5.718801 TGGGTAATACATGTACATGGGTT 57.281 39.130 33.32 27.53 42.91 4.11
3654 10645 3.624707 GCTTCCCACATCAAAGGGTATGA 60.625 47.826 0.00 0.00 45.64 2.15
3664 10655 4.424711 GGCCGGCTTCCCACATCA 62.425 66.667 28.56 0.00 0.00 3.07
3678 10669 5.247337 ACTTTTCCTCATAGAGCTATAGGCC 59.753 44.000 0.00 0.00 43.05 5.19
3679 10670 6.353404 ACTTTTCCTCATAGAGCTATAGGC 57.647 41.667 1.04 0.00 42.19 3.93
3680 10671 9.249053 TCATACTTTTCCTCATAGAGCTATAGG 57.751 37.037 1.04 0.00 0.00 2.57
3682 10673 9.249053 CCTCATACTTTTCCTCATAGAGCTATA 57.751 37.037 0.00 0.00 0.00 1.31
3683 10674 7.732593 ACCTCATACTTTTCCTCATAGAGCTAT 59.267 37.037 0.00 0.00 0.00 2.97
3684 10675 7.069986 ACCTCATACTTTTCCTCATAGAGCTA 58.930 38.462 0.00 0.00 0.00 3.32
3685 10676 5.902431 ACCTCATACTTTTCCTCATAGAGCT 59.098 40.000 0.00 0.00 0.00 4.09
3686 10677 6.168270 ACCTCATACTTTTCCTCATAGAGC 57.832 41.667 0.00 0.00 0.00 4.09
3687 10678 8.919145 AGTAACCTCATACTTTTCCTCATAGAG 58.081 37.037 0.00 0.00 32.18 2.43
3688 10679 8.840200 AGTAACCTCATACTTTTCCTCATAGA 57.160 34.615 0.00 0.00 32.18 1.98
3690 10681 9.931698 TCTAGTAACCTCATACTTTTCCTCATA 57.068 33.333 0.00 0.00 37.34 2.15
3691 10682 8.840200 TCTAGTAACCTCATACTTTTCCTCAT 57.160 34.615 0.00 0.00 37.34 2.90
3692 10683 7.894364 ACTCTAGTAACCTCATACTTTTCCTCA 59.106 37.037 0.00 0.00 37.34 3.86
3693 10684 8.296211 ACTCTAGTAACCTCATACTTTTCCTC 57.704 38.462 0.00 0.00 37.34 3.71
3694 10685 8.667592 AACTCTAGTAACCTCATACTTTTCCT 57.332 34.615 0.00 0.00 37.34 3.36
3695 10686 9.800433 GTAACTCTAGTAACCTCATACTTTTCC 57.200 37.037 0.00 0.00 37.34 3.13
3696 10687 9.500864 CGTAACTCTAGTAACCTCATACTTTTC 57.499 37.037 0.00 0.00 37.34 2.29
3697 10688 9.018582 ACGTAACTCTAGTAACCTCATACTTTT 57.981 33.333 0.00 0.00 37.34 2.27
3698 10689 8.457261 CACGTAACTCTAGTAACCTCATACTTT 58.543 37.037 0.00 0.00 37.34 2.66
3699 10690 7.826252 TCACGTAACTCTAGTAACCTCATACTT 59.174 37.037 0.00 0.00 37.34 2.24
3700 10691 7.334090 TCACGTAACTCTAGTAACCTCATACT 58.666 38.462 0.00 0.00 39.41 2.12
3701 10692 7.545362 TCACGTAACTCTAGTAACCTCATAC 57.455 40.000 0.00 0.00 0.00 2.39
3702 10693 8.565896 TTTCACGTAACTCTAGTAACCTCATA 57.434 34.615 0.00 0.00 0.00 2.15
3703 10694 7.458409 TTTCACGTAACTCTAGTAACCTCAT 57.542 36.000 0.00 0.00 0.00 2.90
3704 10695 6.882610 TTTCACGTAACTCTAGTAACCTCA 57.117 37.500 0.00 0.00 0.00 3.86
3707 10698 9.793252 TGATATTTTCACGTAACTCTAGTAACC 57.207 33.333 0.00 0.00 0.00 2.85
3711 10702 9.175312 TCTCTGATATTTTCACGTAACTCTAGT 57.825 33.333 0.00 0.00 0.00 2.57
3720 10711 8.345565 GGCAAATTATCTCTGATATTTTCACGT 58.654 33.333 0.00 0.00 0.00 4.49
3721 10712 8.344831 TGGCAAATTATCTCTGATATTTTCACG 58.655 33.333 0.00 0.00 0.00 4.35
3724 10715 9.136952 GCATGGCAAATTATCTCTGATATTTTC 57.863 33.333 0.00 0.00 0.00 2.29
3725 10716 8.867097 AGCATGGCAAATTATCTCTGATATTTT 58.133 29.630 0.00 0.00 0.00 1.82
3726 10717 8.418597 AGCATGGCAAATTATCTCTGATATTT 57.581 30.769 0.00 0.00 0.00 1.40
3727 10718 8.954350 GTAGCATGGCAAATTATCTCTGATATT 58.046 33.333 0.00 0.00 0.00 1.28
3728 10719 8.327271 AGTAGCATGGCAAATTATCTCTGATAT 58.673 33.333 0.00 0.00 0.00 1.63
3729 10720 7.605309 CAGTAGCATGGCAAATTATCTCTGATA 59.395 37.037 0.00 0.00 0.00 2.15
3730 10721 6.430308 CAGTAGCATGGCAAATTATCTCTGAT 59.570 38.462 0.00 0.00 0.00 2.90
3731 10722 5.761726 CAGTAGCATGGCAAATTATCTCTGA 59.238 40.000 0.00 0.00 0.00 3.27
3732 10723 5.761726 TCAGTAGCATGGCAAATTATCTCTG 59.238 40.000 0.00 0.00 0.00 3.35
3733 10724 5.933617 TCAGTAGCATGGCAAATTATCTCT 58.066 37.500 0.00 0.00 0.00 3.10
3734 10725 6.484643 TCTTCAGTAGCATGGCAAATTATCTC 59.515 38.462 0.00 0.00 0.00 2.75
3735 10726 6.359804 TCTTCAGTAGCATGGCAAATTATCT 58.640 36.000 0.00 0.00 0.00 1.98
3736 10727 6.484643 TCTCTTCAGTAGCATGGCAAATTATC 59.515 38.462 0.00 0.00 0.00 1.75
3737 10728 6.359804 TCTCTTCAGTAGCATGGCAAATTAT 58.640 36.000 0.00 0.00 0.00 1.28
3738 10729 5.744171 TCTCTTCAGTAGCATGGCAAATTA 58.256 37.500 0.00 0.00 0.00 1.40
3739 10730 4.592942 TCTCTTCAGTAGCATGGCAAATT 58.407 39.130 0.00 0.00 0.00 1.82
3740 10731 4.226427 TCTCTTCAGTAGCATGGCAAAT 57.774 40.909 0.00 0.00 0.00 2.32
3741 10732 3.701205 TCTCTTCAGTAGCATGGCAAA 57.299 42.857 0.00 0.00 0.00 3.68
3742 10733 3.603532 CTTCTCTTCAGTAGCATGGCAA 58.396 45.455 0.00 0.00 0.00 4.52
3743 10734 2.679059 GCTTCTCTTCAGTAGCATGGCA 60.679 50.000 0.00 0.00 41.54 4.92
3744 10735 1.939255 GCTTCTCTTCAGTAGCATGGC 59.061 52.381 0.00 0.00 41.54 4.40
3745 10736 2.559440 GGCTTCTCTTCAGTAGCATGG 58.441 52.381 0.00 0.00 43.23 3.66
3746 10737 2.200067 CGGCTTCTCTTCAGTAGCATG 58.800 52.381 3.45 0.00 43.23 4.06
3747 10738 1.827969 ACGGCTTCTCTTCAGTAGCAT 59.172 47.619 3.45 0.00 43.23 3.79
3748 10739 1.257743 ACGGCTTCTCTTCAGTAGCA 58.742 50.000 3.45 0.00 43.23 3.49
3749 10740 2.163815 TGTACGGCTTCTCTTCAGTAGC 59.836 50.000 0.00 0.00 41.26 3.58
3750 10741 4.436242 TTGTACGGCTTCTCTTCAGTAG 57.564 45.455 0.00 0.00 0.00 2.57
3751 10742 6.152323 AGTTATTGTACGGCTTCTCTTCAGTA 59.848 38.462 0.00 0.00 0.00 2.74
3752 10743 3.963428 ATTGTACGGCTTCTCTTCAGT 57.037 42.857 0.00 0.00 0.00 3.41
3753 10744 5.411781 AGTTATTGTACGGCTTCTCTTCAG 58.588 41.667 0.00 0.00 0.00 3.02
3754 10745 5.401531 AGTTATTGTACGGCTTCTCTTCA 57.598 39.130 0.00 0.00 0.00 3.02
3755 10746 7.201145 TCATAGTTATTGTACGGCTTCTCTTC 58.799 38.462 0.00 0.00 0.00 2.87
3756 10747 7.108841 TCATAGTTATTGTACGGCTTCTCTT 57.891 36.000 0.00 0.00 0.00 2.85
3757 10748 6.239064 CCTCATAGTTATTGTACGGCTTCTCT 60.239 42.308 0.00 0.00 0.00 3.10
3758 10749 5.921408 CCTCATAGTTATTGTACGGCTTCTC 59.079 44.000 0.00 0.00 0.00 2.87
3759 10750 5.363005 ACCTCATAGTTATTGTACGGCTTCT 59.637 40.000 0.00 0.00 0.00 2.85
3760 10751 5.598769 ACCTCATAGTTATTGTACGGCTTC 58.401 41.667 0.00 0.00 0.00 3.86
3761 10752 5.609533 ACCTCATAGTTATTGTACGGCTT 57.390 39.130 0.00 0.00 0.00 4.35
3762 10753 5.609533 AACCTCATAGTTATTGTACGGCT 57.390 39.130 0.00 0.00 0.00 5.52
3763 10754 6.420008 CAGTAACCTCATAGTTATTGTACGGC 59.580 42.308 0.00 0.00 36.02 5.68
3764 10755 6.921857 CCAGTAACCTCATAGTTATTGTACGG 59.078 42.308 6.30 0.00 37.92 4.02
3765 10756 7.709947 TCCAGTAACCTCATAGTTATTGTACG 58.290 38.462 6.30 0.00 37.92 3.67
3766 10757 8.693625 ACTCCAGTAACCTCATAGTTATTGTAC 58.306 37.037 6.30 0.00 37.92 2.90
3767 10758 8.834004 ACTCCAGTAACCTCATAGTTATTGTA 57.166 34.615 6.30 0.00 37.92 2.41
3768 10759 7.735326 ACTCCAGTAACCTCATAGTTATTGT 57.265 36.000 6.30 0.00 37.92 2.71
3769 10760 9.530633 GTAACTCCAGTAACCTCATAGTTATTG 57.469 37.037 0.00 0.00 38.79 1.90
3770 10761 8.411683 CGTAACTCCAGTAACCTCATAGTTATT 58.588 37.037 0.00 0.00 34.85 1.40
3771 10762 7.559170 ACGTAACTCCAGTAACCTCATAGTTAT 59.441 37.037 0.00 0.00 34.85 1.89
3772 10763 6.886459 ACGTAACTCCAGTAACCTCATAGTTA 59.114 38.462 0.00 0.00 0.00 2.24
3773 10764 5.713861 ACGTAACTCCAGTAACCTCATAGTT 59.286 40.000 0.00 0.00 0.00 2.24
3774 10765 5.125097 CACGTAACTCCAGTAACCTCATAGT 59.875 44.000 0.00 0.00 0.00 2.12
3775 10766 5.356190 TCACGTAACTCCAGTAACCTCATAG 59.644 44.000 0.00 0.00 0.00 2.23
3776 10767 5.255687 TCACGTAACTCCAGTAACCTCATA 58.744 41.667 0.00 0.00 0.00 2.15
3777 10768 4.084287 TCACGTAACTCCAGTAACCTCAT 58.916 43.478 0.00 0.00 0.00 2.90
3778 10769 3.489355 TCACGTAACTCCAGTAACCTCA 58.511 45.455 0.00 0.00 0.00 3.86
3779 10770 4.510038 TTCACGTAACTCCAGTAACCTC 57.490 45.455 0.00 0.00 0.00 3.85
3780 10771 4.942761 TTTCACGTAACTCCAGTAACCT 57.057 40.909 0.00 0.00 0.00 3.50
3781 10772 7.546667 TGATATTTTCACGTAACTCCAGTAACC 59.453 37.037 0.00 0.00 0.00 2.85
3782 10773 8.470040 TGATATTTTCACGTAACTCCAGTAAC 57.530 34.615 0.00 0.00 0.00 2.50
3783 10774 8.525316 TCTGATATTTTCACGTAACTCCAGTAA 58.475 33.333 0.00 0.00 0.00 2.24
3784 10775 8.058667 TCTGATATTTTCACGTAACTCCAGTA 57.941 34.615 0.00 0.00 0.00 2.74
3785 10776 6.931838 TCTGATATTTTCACGTAACTCCAGT 58.068 36.000 0.00 0.00 0.00 4.00
3786 10777 7.258441 TCTCTGATATTTTCACGTAACTCCAG 58.742 38.462 0.00 0.00 0.00 3.86
3787 10778 7.165460 TCTCTGATATTTTCACGTAACTCCA 57.835 36.000 0.00 0.00 0.00 3.86
3788 10779 9.745880 TTATCTCTGATATTTTCACGTAACTCC 57.254 33.333 0.00 0.00 0.00 3.85
3820 10811 9.904198 CCCTTGTCAATATTCCCAAATAAAAAT 57.096 29.630 0.00 0.00 31.28 1.82
3821 10812 7.826744 GCCCTTGTCAATATTCCCAAATAAAAA 59.173 33.333 0.00 0.00 31.28 1.94
3822 10813 7.038017 TGCCCTTGTCAATATTCCCAAATAAAA 60.038 33.333 0.00 0.00 31.28 1.52
3823 10814 6.441924 TGCCCTTGTCAATATTCCCAAATAAA 59.558 34.615 0.00 0.00 31.28 1.40
3824 10815 5.960811 TGCCCTTGTCAATATTCCCAAATAA 59.039 36.000 0.00 0.00 31.28 1.40
3825 10816 5.523588 TGCCCTTGTCAATATTCCCAAATA 58.476 37.500 0.00 0.00 0.00 1.40
3826 10817 4.360889 TGCCCTTGTCAATATTCCCAAAT 58.639 39.130 0.00 0.00 0.00 2.32
3827 10818 3.784178 TGCCCTTGTCAATATTCCCAAA 58.216 40.909 0.00 0.00 0.00 3.28
3828 10819 3.464720 TGCCCTTGTCAATATTCCCAA 57.535 42.857 0.00 0.00 0.00 4.12
3829 10820 3.686227 ATGCCCTTGTCAATATTCCCA 57.314 42.857 0.00 0.00 0.00 4.37
3830 10821 3.493176 GCAATGCCCTTGTCAATATTCCC 60.493 47.826 0.00 0.00 37.18 3.97
3831 10822 3.493176 GGCAATGCCCTTGTCAATATTCC 60.493 47.826 14.47 0.00 44.06 3.01
3832 10823 3.721035 GGCAATGCCCTTGTCAATATTC 58.279 45.455 14.47 0.00 44.06 1.75
3833 10824 3.825143 GGCAATGCCCTTGTCAATATT 57.175 42.857 14.47 0.00 44.06 1.28
3846 10837 1.274596 CTCGCTTGATTTGGCAATGC 58.725 50.000 0.00 0.00 0.00 3.56
3847 10838 2.256174 CACTCGCTTGATTTGGCAATG 58.744 47.619 0.00 0.00 0.00 2.82
3848 10839 1.888512 ACACTCGCTTGATTTGGCAAT 59.111 42.857 0.00 0.00 0.00 3.56
3849 10840 1.317613 ACACTCGCTTGATTTGGCAA 58.682 45.000 0.00 0.00 0.00 4.52
3850 10841 2.177394 TACACTCGCTTGATTTGGCA 57.823 45.000 0.00 0.00 0.00 4.92
3851 10842 2.484264 AGTTACACTCGCTTGATTTGGC 59.516 45.455 0.00 0.00 0.00 4.52
3852 10843 4.688879 TGTAGTTACACTCGCTTGATTTGG 59.311 41.667 0.00 0.00 0.00 3.28
3853 10844 5.839262 TGTAGTTACACTCGCTTGATTTG 57.161 39.130 0.00 0.00 0.00 2.32
3854 10845 6.854496 TTTGTAGTTACACTCGCTTGATTT 57.146 33.333 0.00 0.00 35.64 2.17
3855 10846 7.817962 ACTATTTGTAGTTACACTCGCTTGATT 59.182 33.333 0.00 0.00 35.64 2.57
3856 10847 7.321153 ACTATTTGTAGTTACACTCGCTTGAT 58.679 34.615 0.00 0.00 35.64 2.57
3857 10848 6.684686 ACTATTTGTAGTTACACTCGCTTGA 58.315 36.000 0.00 0.00 35.64 3.02
3858 10849 6.946229 ACTATTTGTAGTTACACTCGCTTG 57.054 37.500 0.00 0.00 35.64 4.01
3859 10850 9.649167 AATTACTATTTGTAGTTACACTCGCTT 57.351 29.630 0.00 0.00 35.64 4.68
3860 10851 9.084164 CAATTACTATTTGTAGTTACACTCGCT 57.916 33.333 0.00 0.00 35.64 4.93
3861 10852 7.844653 GCAATTACTATTTGTAGTTACACTCGC 59.155 37.037 0.00 0.00 35.64 5.03
3862 10853 9.084164 AGCAATTACTATTTGTAGTTACACTCG 57.916 33.333 0.00 0.00 35.64 4.18
3870 10861 9.908152 GGAAACAAAGCAATTACTATTTGTAGT 57.092 29.630 2.90 0.00 43.17 2.73
3871 10862 9.353999 GGGAAACAAAGCAATTACTATTTGTAG 57.646 33.333 2.90 0.00 43.17 2.74
3872 10863 8.861086 TGGGAAACAAAGCAATTACTATTTGTA 58.139 29.630 2.90 0.00 43.17 2.41
3873 10864 7.731054 TGGGAAACAAAGCAATTACTATTTGT 58.269 30.769 0.00 0.00 45.21 2.83
3874 10865 8.087750 TCTGGGAAACAAAGCAATTACTATTTG 58.912 33.333 0.00 0.00 38.35 2.32
3875 10866 8.189119 TCTGGGAAACAAAGCAATTACTATTT 57.811 30.769 0.00 0.00 0.00 1.40
3876 10867 7.775053 TCTGGGAAACAAAGCAATTACTATT 57.225 32.000 0.00 0.00 0.00 1.73
3877 10868 7.669722 TCTTCTGGGAAACAAAGCAATTACTAT 59.330 33.333 0.00 0.00 0.00 2.12
3878 10869 7.001674 TCTTCTGGGAAACAAAGCAATTACTA 58.998 34.615 0.00 0.00 0.00 1.82
3879 10870 5.833131 TCTTCTGGGAAACAAAGCAATTACT 59.167 36.000 0.00 0.00 0.00 2.24
3880 10871 6.084326 TCTTCTGGGAAACAAAGCAATTAC 57.916 37.500 0.00 0.00 0.00 1.89
3881 10872 6.723298 TTCTTCTGGGAAACAAAGCAATTA 57.277 33.333 0.00 0.00 0.00 1.40
3882 10873 5.612725 TTCTTCTGGGAAACAAAGCAATT 57.387 34.783 0.00 0.00 0.00 2.32
3883 10874 5.612725 TTTCTTCTGGGAAACAAAGCAAT 57.387 34.783 0.00 0.00 31.29 3.56
3884 10875 5.186797 TCTTTTCTTCTGGGAAACAAAGCAA 59.813 36.000 0.00 0.00 35.31 3.91
3885 10876 4.709397 TCTTTTCTTCTGGGAAACAAAGCA 59.291 37.500 0.00 0.00 35.31 3.91
3886 10877 5.043903 GTCTTTTCTTCTGGGAAACAAAGC 58.956 41.667 0.00 0.00 35.31 3.51
3887 10878 6.095440 TCAGTCTTTTCTTCTGGGAAACAAAG 59.905 38.462 0.00 0.00 35.31 2.77
3888 10879 5.949354 TCAGTCTTTTCTTCTGGGAAACAAA 59.051 36.000 0.00 0.00 35.31 2.83
3889 10880 5.357032 GTCAGTCTTTTCTTCTGGGAAACAA 59.643 40.000 0.00 0.00 35.31 2.83
3890 10881 4.881850 GTCAGTCTTTTCTTCTGGGAAACA 59.118 41.667 0.00 0.00 35.31 2.83
3891 10882 4.276183 GGTCAGTCTTTTCTTCTGGGAAAC 59.724 45.833 0.00 0.00 35.31 2.78
3892 10883 4.166144 AGGTCAGTCTTTTCTTCTGGGAAA 59.834 41.667 0.00 0.00 33.98 3.13
3893 10884 3.716872 AGGTCAGTCTTTTCTTCTGGGAA 59.283 43.478 0.00 0.00 0.00 3.97
3894 10885 3.318313 AGGTCAGTCTTTTCTTCTGGGA 58.682 45.455 0.00 0.00 0.00 4.37
3895 10886 3.778954 AGGTCAGTCTTTTCTTCTGGG 57.221 47.619 0.00 0.00 0.00 4.45
3904 10895 4.335594 CGGTTCAAGAAAAGGTCAGTCTTT 59.664 41.667 0.00 0.00 38.48 2.52
3911 10902 2.034179 CCCAACGGTTCAAGAAAAGGTC 59.966 50.000 0.00 0.00 0.00 3.85
3912 10903 2.028876 CCCAACGGTTCAAGAAAAGGT 58.971 47.619 0.00 0.00 0.00 3.50
3915 10906 1.751924 CACCCCAACGGTTCAAGAAAA 59.248 47.619 0.00 0.00 45.36 2.29
3919 10910 1.170290 GGTCACCCCAACGGTTCAAG 61.170 60.000 0.00 0.00 45.36 3.02
3934 10925 6.244654 TGAATGTGATCAATTTAGGTGGTCA 58.755 36.000 0.00 0.00 33.71 4.02
3961 10952 3.241067 TCGATCCGGTTTTCCTTACTG 57.759 47.619 0.00 0.00 37.95 2.74
3968 10959 3.561503 CAAGGTTTTCGATCCGGTTTTC 58.438 45.455 0.00 0.00 0.00 2.29
3975 10966 1.004394 AGGGACCAAGGTTTTCGATCC 59.996 52.381 0.00 0.00 0.00 3.36
3985 10976 0.257039 CCTCATGGAAGGGACCAAGG 59.743 60.000 0.00 0.00 43.47 3.61
4104 11095 4.591498 TCCTCTAGTAGTTGGTTTTCTGCA 59.409 41.667 10.28 0.00 0.00 4.41
4106 11097 6.097915 TGTCCTCTAGTAGTTGGTTTTCTG 57.902 41.667 10.28 0.00 0.00 3.02
4115 11106 4.282496 CATCCACCTGTCCTCTAGTAGTT 58.718 47.826 0.00 0.00 0.00 2.24
4139 11130 8.700051 AGTACATCATTAATCTGTTCTGCTACT 58.300 33.333 5.71 1.12 0.00 2.57
4141 11132 8.144478 GGAGTACATCATTAATCTGTTCTGCTA 58.856 37.037 13.60 0.00 30.00 3.49
4220 11212 8.645814 TCCCTTCGTAGATAAATATAAGAGCA 57.354 34.615 0.00 0.00 35.04 4.26
4233 11225 9.012161 GTCAATACTATTACTCCCTTCGTAGAT 57.988 37.037 0.00 0.00 35.04 1.98
4331 11323 3.950395 GCAAACTGAGGCCTTATCTTCAT 59.050 43.478 6.77 0.00 0.00 2.57
4456 11448 1.872237 GCGCTGTTTGAGGAGTACACA 60.872 52.381 0.00 0.00 0.00 3.72


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.