Multiple sequence alignment - TraesCS7D01G196700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G196700 chr7D 100.000 6230 0 0 1 6230 153315664 153309435 0.000000e+00 11505.0
1 TraesCS7D01G196700 chr7D 94.199 362 14 5 5725 6081 142209815 142209456 4.250000e-151 545.0
2 TraesCS7D01G196700 chr7D 88.710 372 32 4 886 1247 117797777 117797406 4.430000e-121 446.0
3 TraesCS7D01G196700 chr7D 92.953 298 16 5 1 294 117809555 117809259 4.460000e-116 429.0
4 TraesCS7D01G196700 chr7D 88.056 360 37 5 864 1217 85030490 85030131 7.470000e-114 422.0
5 TraesCS7D01G196700 chr7D 93.956 182 11 0 2730 2911 384149014 384148833 6.150000e-70 276.0
6 TraesCS7D01G196700 chr7D 93.671 79 4 1 797 875 520951108 520951185 3.950000e-22 117.0
7 TraesCS7D01G196700 chr7D 91.139 79 4 1 723 798 30831933 30831855 3.070000e-18 104.0
8 TraesCS7D01G196700 chr7A 94.720 2765 111 19 1 2742 154565711 154562959 0.000000e+00 4265.0
9 TraesCS7D01G196700 chr7A 95.356 2627 93 14 2904 5509 154562960 154560342 0.000000e+00 4148.0
10 TraesCS7D01G196700 chr7A 90.975 554 33 12 310 863 4804427 4803891 0.000000e+00 730.0
11 TraesCS7D01G196700 chr7A 97.458 118 3 0 5512 5629 154556557 154556440 1.060000e-47 202.0
12 TraesCS7D01G196700 chr7B 92.813 2115 116 15 3583 5682 115287989 115285896 0.000000e+00 3031.0
13 TraesCS7D01G196700 chr7B 94.726 929 42 4 1819 2742 115289440 115288514 0.000000e+00 1437.0
14 TraesCS7D01G196700 chr7B 89.485 447 30 7 5723 6154 314312679 314313123 3.280000e-152 549.0
15 TraesCS7D01G196700 chr7B 86.000 400 41 6 866 1250 570220872 570220473 1.250000e-111 414.0
16 TraesCS7D01G196700 chr7B 85.882 340 46 2 2403 2742 115355918 115355581 1.650000e-95 361.0
17 TraesCS7D01G196700 chr7B 88.800 125 8 5 2913 3036 115355571 115355452 1.400000e-31 148.0
18 TraesCS7D01G196700 chr2D 95.247 526 7 5 5723 6230 441880552 441881077 0.000000e+00 817.0
19 TraesCS7D01G196700 chr2D 95.971 273 9 2 1 271 193110503 193110775 5.730000e-120 442.0
20 TraesCS7D01G196700 chr2D 88.554 166 15 2 1655 1820 571079119 571078958 1.370000e-46 198.0
21 TraesCS7D01G196700 chr5D 94.727 531 10 6 5716 6230 405160638 405161166 0.000000e+00 809.0
22 TraesCS7D01G196700 chr5D 91.749 509 29 7 5725 6230 493257971 493258469 0.000000e+00 695.0
23 TraesCS7D01G196700 chr5D 95.636 275 10 2 1 273 232696366 232696640 2.060000e-119 440.0
24 TraesCS7D01G196700 chr5D 94.097 288 13 3 1 286 99476178 99476463 9.590000e-118 435.0
25 TraesCS7D01G196700 chr5D 86.957 299 24 6 964 1247 264490694 264490992 7.790000e-84 322.0
26 TraesCS7D01G196700 chr5D 94.595 74 4 0 797 870 375164860 375164787 1.420000e-21 115.0
27 TraesCS7D01G196700 chr5D 80.137 146 17 7 1247 1380 476463931 476463786 1.430000e-16 99.0
28 TraesCS7D01G196700 chr3B 93.617 517 19 4 5723 6230 710547021 710547532 0.000000e+00 760.0
29 TraesCS7D01G196700 chr3B 95.636 275 10 2 2 274 178177930 178177656 2.060000e-119 440.0
30 TraesCS7D01G196700 chr3B 91.429 210 11 4 666 870 804541291 804541084 1.320000e-71 281.0
31 TraesCS7D01G196700 chr3B 95.402 174 7 1 2735 2907 655849414 655849587 6.150000e-70 276.0
32 TraesCS7D01G196700 chr3B 94.366 71 4 0 797 867 104504184 104504114 6.600000e-20 110.0
33 TraesCS7D01G196700 chr1B 92.381 525 20 8 5725 6230 8185606 8186129 0.000000e+00 730.0
34 TraesCS7D01G196700 chr1B 86.429 280 26 8 980 1247 625911099 625911378 4.720000e-76 296.0
35 TraesCS7D01G196700 chr1B 95.930 172 6 1 2735 2905 480970207 480970378 1.710000e-70 278.0
36 TraesCS7D01G196700 chr1B 88.623 167 15 1 1653 1819 40182355 40182193 3.810000e-47 200.0
37 TraesCS7D01G196700 chr1B 86.932 176 19 1 1653 1828 673861310 673861139 1.770000e-45 195.0
38 TraesCS7D01G196700 chr1B 91.111 45 4 0 3082 3126 133274082 133274038 1.880000e-05 62.1
39 TraesCS7D01G196700 chr6A 90.595 521 34 5 5725 6230 181006249 181006769 0.000000e+00 676.0
40 TraesCS7D01G196700 chr6A 90.000 60 3 2 752 808 553920828 553920887 2.410000e-09 75.0
41 TraesCS7D01G196700 chr5B 89.524 525 18 12 5725 6230 670506496 670505990 1.140000e-176 630.0
42 TraesCS7D01G196700 chr5B 90.337 445 35 7 368 808 641815403 641814963 1.510000e-160 577.0
43 TraesCS7D01G196700 chr5B 94.413 179 8 2 2735 2912 427931373 427931196 2.210000e-69 274.0
44 TraesCS7D01G196700 chr5B 95.312 128 6 0 505 632 118542782 118542909 2.940000e-48 204.0
45 TraesCS7D01G196700 chr5B 91.156 147 11 2 503 649 405502849 405502993 1.370000e-46 198.0
46 TraesCS7D01G196700 chr5B 76.471 136 24 5 1120 1247 550143142 550143007 4.030000e-07 67.6
47 TraesCS7D01G196700 chr4A 91.410 454 25 8 5725 6166 649390934 649391385 1.480000e-170 610.0
48 TraesCS7D01G196700 chr4A 89.356 404 30 7 5725 6125 80000436 80000829 4.340000e-136 496.0
49 TraesCS7D01G196700 chr4A 92.208 154 11 1 480 632 743753980 743753827 3.780000e-52 217.0
50 TraesCS7D01G196700 chr3A 84.694 490 52 13 270 745 479127695 479128175 9.460000e-128 468.0
51 TraesCS7D01G196700 chr3A 93.048 187 10 3 2740 2925 154030546 154030362 2.860000e-68 270.0
52 TraesCS7D01G196700 chr3A 88.889 72 3 3 864 935 41221414 41221480 4.000000e-12 84.2
53 TraesCS7D01G196700 chr2A 88.052 385 42 4 865 1247 275103 275485 2.650000e-123 453.0
54 TraesCS7D01G196700 chr2A 95.376 173 8 0 2733 2905 746756982 746757154 6.150000e-70 276.0
55 TraesCS7D01G196700 chr2A 87.243 243 19 9 1013 1247 189173940 189173702 3.700000e-67 267.0
56 TraesCS7D01G196700 chr3D 95.971 273 9 2 1 271 445667998 445667726 5.730000e-120 442.0
57 TraesCS7D01G196700 chr3D 88.366 361 30 6 898 1247 501824758 501825117 2.080000e-114 424.0
58 TraesCS7D01G196700 chr3D 86.253 371 42 3 885 1247 427780450 427780081 1.630000e-105 394.0
59 TraesCS7D01G196700 chr3D 92.500 40 2 1 770 808 14316322 14316283 8.720000e-04 56.5
60 TraesCS7D01G196700 chr3D 92.500 40 2 1 770 808 92892854 92892815 8.720000e-04 56.5
61 TraesCS7D01G196700 chr3D 92.500 40 2 1 770 808 382818141 382818102 8.720000e-04 56.5
62 TraesCS7D01G196700 chr1D 95.971 273 9 2 1 271 361599992 361600264 5.730000e-120 442.0
63 TraesCS7D01G196700 chr1D 94.718 284 12 3 1 282 467667788 467667506 7.410000e-119 438.0
64 TraesCS7D01G196700 chr1D 87.023 393 35 7 864 1247 482915127 482915512 4.460000e-116 429.0
65 TraesCS7D01G196700 chr1D 90.506 158 14 1 1654 1811 462719803 462719959 2.280000e-49 207.0
66 TraesCS7D01G196700 chr1A 87.395 357 28 9 376 728 447003448 447003105 1.630000e-105 394.0
67 TraesCS7D01G196700 chr1A 94.615 130 7 0 503 632 532383359 532383488 1.060000e-47 202.0
68 TraesCS7D01G196700 chr5A 96.471 170 6 0 2737 2906 382566806 382566637 1.320000e-71 281.0
69 TraesCS7D01G196700 chr5A 94.521 73 4 0 797 869 331105411 331105483 5.100000e-21 113.0
70 TraesCS7D01G196700 chr2B 95.906 171 7 0 2740 2910 404425916 404425746 1.710000e-70 278.0
71 TraesCS7D01G196700 chr2B 100.000 28 0 0 1259 1286 318202985 318203012 1.100000e-02 52.8
72 TraesCS7D01G196700 chr6D 95.376 173 8 0 2740 2912 97856419 97856591 6.150000e-70 276.0
73 TraesCS7D01G196700 chr6D 93.671 79 4 1 797 875 459280569 459280646 3.950000e-22 117.0
74 TraesCS7D01G196700 chr6B 89.349 169 13 5 1653 1820 83138548 83138384 2.280000e-49 207.0
75 TraesCS7D01G196700 chr4B 89.157 166 14 1 1655 1820 406389457 406389296 2.940000e-48 204.0
76 TraesCS7D01G196700 chr4B 93.243 74 5 0 797 870 106494542 106494469 6.600000e-20 110.0
77 TraesCS7D01G196700 chr4D 89.157 166 13 5 1655 1820 427269514 427269674 1.060000e-47 202.0
78 TraesCS7D01G196700 chr4D 88.757 169 11 5 1654 1820 34661689 34661527 3.810000e-47 200.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G196700 chr7D 153309435 153315664 6229 True 11505.000000 11505 100.000000 1 6230 1 chr7D.!!$R6 6229
1 TraesCS7D01G196700 chr7A 154556440 154565711 9271 True 2871.666667 4265 95.844667 1 5629 3 chr7A.!!$R2 5628
2 TraesCS7D01G196700 chr7A 4803891 4804427 536 True 730.000000 730 90.975000 310 863 1 chr7A.!!$R1 553
3 TraesCS7D01G196700 chr7B 115285896 115289440 3544 True 2234.000000 3031 93.769500 1819 5682 2 chr7B.!!$R2 3863
4 TraesCS7D01G196700 chr2D 441880552 441881077 525 False 817.000000 817 95.247000 5723 6230 1 chr2D.!!$F2 507
5 TraesCS7D01G196700 chr5D 405160638 405161166 528 False 809.000000 809 94.727000 5716 6230 1 chr5D.!!$F4 514
6 TraesCS7D01G196700 chr3B 710547021 710547532 511 False 760.000000 760 93.617000 5723 6230 1 chr3B.!!$F2 507
7 TraesCS7D01G196700 chr1B 8185606 8186129 523 False 730.000000 730 92.381000 5725 6230 1 chr1B.!!$F1 505
8 TraesCS7D01G196700 chr6A 181006249 181006769 520 False 676.000000 676 90.595000 5725 6230 1 chr6A.!!$F1 505
9 TraesCS7D01G196700 chr5B 670505990 670506496 506 True 630.000000 630 89.524000 5725 6230 1 chr5B.!!$R4 505

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
235 238 0.249447 GCACTTGAAGGCCCAACAAC 60.249 55.000 0.00 0.0 0.00 3.32 F
1091 1106 0.478072 TTGATGCTGACAGGTGGGTT 59.522 50.000 4.26 0.0 0.00 4.11 F
1127 1142 1.255600 GCGTTTAGAAGAGGCGAATCG 59.744 52.381 0.00 0.0 0.00 3.34 F
1497 1521 1.519455 CGACATTGACGAGGGCTCC 60.519 63.158 2.30 0.0 0.00 4.70 F
3105 3145 0.610687 GTCTGAACTGTGGGAGAGGG 59.389 60.000 0.00 0.0 0.00 4.30 F
4131 4207 0.096454 TATCACACTCGTCGCAGTCG 59.904 55.000 0.00 0.0 41.01 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1128 1143 0.035820 TACCATGTCGGGAAAGTGCC 60.036 55.000 0.00 0.0 40.22 5.01 R
2461 2491 1.425066 AGATCTGTTCTTGGTTGCCCA 59.575 47.619 0.00 0.0 39.65 5.36 R
2486 2516 2.260844 AATGGGATACAGGTGATGCG 57.739 50.000 0.00 0.0 39.74 4.73 R
3107 3147 3.384168 ACCTGCTGGAGTATAATGTCCA 58.616 45.455 17.64 0.0 40.72 4.02 R
4314 4393 0.393132 TGGTGACGGCAACAACAGAA 60.393 50.000 6.48 0.0 39.17 3.02 R
5853 9724 1.843368 TTCCATCGGAGTCGGTTACT 58.157 50.000 0.00 0.0 42.80 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 5.627499 TTGCACTTGTATCACCATCTTTC 57.373 39.130 0.00 0.00 0.00 2.62
70 73 8.126700 GTGCACCTATACAATTTACCATTGTAC 58.873 37.037 5.22 0.00 44.28 2.90
82 85 2.092103 ACCATTGTACTGGGTGTGTTGT 60.092 45.455 6.15 0.00 40.85 3.32
152 155 3.041946 ACCATCTTCATCCTACACCTCC 58.958 50.000 0.00 0.00 0.00 4.30
184 187 6.414732 TGATAAACCTTAGGTCATCCACTTG 58.585 40.000 17.80 0.00 33.12 3.16
206 209 3.690460 AGGGAAATTTGCTACTGTCCTG 58.310 45.455 9.70 0.00 0.00 3.86
214 217 1.142870 TGCTACTGTCCTGCAAACCTT 59.857 47.619 0.00 0.00 33.48 3.50
235 238 0.249447 GCACTTGAAGGCCCAACAAC 60.249 55.000 0.00 0.00 0.00 3.32
244 247 0.872388 GGCCCAACAACGTCTACAAG 59.128 55.000 0.00 0.00 0.00 3.16
247 250 2.223377 GCCCAACAACGTCTACAAGAAG 59.777 50.000 0.00 0.00 0.00 2.85
256 259 4.618965 ACGTCTACAAGAAGAAGGTTGTC 58.381 43.478 0.00 0.00 37.96 3.18
519 531 4.626081 GCAGGTGTGGGTGAGCGT 62.626 66.667 0.00 0.00 0.00 5.07
678 692 1.000486 AGTAGAGGGGAAGCAGCGA 60.000 57.895 0.00 0.00 0.00 4.93
962 976 4.459089 GCCGCTGTCTCCAGTCCC 62.459 72.222 0.00 0.00 41.02 4.46
988 1002 4.821589 CCGGAGAGGTGCTTCGCC 62.822 72.222 0.00 0.00 44.53 5.54
1011 1025 1.086634 GTGTCGCCATGGAGAAGAGC 61.087 60.000 20.63 8.27 0.00 4.09
1015 1029 2.496341 CCATGGAGAAGAGCGCGA 59.504 61.111 12.10 0.00 0.00 5.87
1045 1059 1.131826 GGTGTTCGACGAAATGCCG 59.868 57.895 12.67 0.00 0.00 5.69
1046 1060 1.286354 GGTGTTCGACGAAATGCCGA 61.286 55.000 12.67 0.00 0.00 5.54
1068 1083 3.197983 AGAGAGAGAAGGAGGAGGAAGA 58.802 50.000 0.00 0.00 0.00 2.87
1091 1106 0.478072 TTGATGCTGACAGGTGGGTT 59.522 50.000 4.26 0.00 0.00 4.11
1127 1142 1.255600 GCGTTTAGAAGAGGCGAATCG 59.744 52.381 0.00 0.00 0.00 3.34
1128 1143 1.852895 CGTTTAGAAGAGGCGAATCGG 59.147 52.381 4.35 0.00 0.00 4.18
1137 1152 2.761195 GGCGAATCGGGCACTTTCC 61.761 63.158 4.35 0.00 0.00 3.13
1157 1172 5.231702 TCCCGACATGGTAGTTTTTAGTT 57.768 39.130 0.00 0.00 35.15 2.24
1189 1204 5.357596 AGTTAAAAAGTGGTAGTTTTCGGCA 59.642 36.000 0.00 0.00 30.05 5.69
1190 1205 4.929819 AAAAAGTGGTAGTTTTCGGCAT 57.070 36.364 0.00 0.00 30.05 4.40
1457 1481 2.014068 GCATCCAGCAGGGTAAGTGTC 61.014 57.143 0.00 0.00 44.79 3.67
1497 1521 1.519455 CGACATTGACGAGGGCTCC 60.519 63.158 2.30 0.00 0.00 4.70
1659 1683 7.040686 TGGTTGCATTTTACTCTTTTCTACTCC 60.041 37.037 0.00 0.00 0.00 3.85
1678 1702 9.756571 TCTACTCCCTCAGATCCTAAATATAAC 57.243 37.037 0.00 0.00 0.00 1.89
1717 1741 9.731819 GAGATTTCAACATAGACTACATACGAA 57.268 33.333 0.00 0.00 0.00 3.85
1729 1753 3.788434 ACATACGAAGCAAAACGAGTG 57.212 42.857 0.00 0.00 0.00 3.51
1738 1762 4.992381 AGCAAAACGAGTGAATCTACAC 57.008 40.909 0.00 0.00 40.60 2.90
1864 1889 3.317711 TGCTAGTCATGCTCTCTCTAAGC 59.682 47.826 0.00 0.00 40.26 3.09
1929 1954 5.682862 GCAAATGTAGTTATACACAGCATGC 59.317 40.000 10.51 10.51 44.51 4.06
2460 2490 1.618861 CGATCGTCGAAAAGCTGAGT 58.381 50.000 7.03 0.00 43.74 3.41
2461 2491 1.986378 CGATCGTCGAAAAGCTGAGTT 59.014 47.619 7.03 0.00 43.74 3.01
2486 2516 3.126000 GCAACCAAGAACAGATCTGTAGC 59.874 47.826 28.10 21.64 44.13 3.58
2550 2581 2.287308 GGTCAGTTGTTGCGCAATACAA 60.287 45.455 27.79 23.77 39.55 2.41
2698 2729 3.426525 GTCAGCTAAAGCAACACATTTGC 59.573 43.478 4.54 0.58 45.16 3.68
2741 2775 1.134037 ACGCCACCAGGTTTGTTTCTA 60.134 47.619 0.00 0.00 37.19 2.10
2742 2776 1.265905 CGCCACCAGGTTTGTTTCTAC 59.734 52.381 0.00 0.00 37.19 2.59
2743 2777 2.583143 GCCACCAGGTTTGTTTCTACT 58.417 47.619 0.00 0.00 37.19 2.57
2744 2778 2.552743 GCCACCAGGTTTGTTTCTACTC 59.447 50.000 0.00 0.00 37.19 2.59
2745 2779 3.146847 CCACCAGGTTTGTTTCTACTCC 58.853 50.000 0.00 0.00 0.00 3.85
2746 2780 3.146847 CACCAGGTTTGTTTCTACTCCC 58.853 50.000 0.00 0.00 0.00 4.30
2747 2781 3.053826 ACCAGGTTTGTTTCTACTCCCT 58.946 45.455 0.00 0.00 0.00 4.20
2748 2782 3.072622 ACCAGGTTTGTTTCTACTCCCTC 59.927 47.826 0.00 0.00 0.00 4.30
2749 2783 3.559384 CCAGGTTTGTTTCTACTCCCTCC 60.559 52.174 0.00 0.00 0.00 4.30
2750 2784 3.072476 CAGGTTTGTTTCTACTCCCTCCA 59.928 47.826 0.00 0.00 0.00 3.86
2751 2785 3.916989 AGGTTTGTTTCTACTCCCTCCAT 59.083 43.478 0.00 0.00 0.00 3.41
2752 2786 4.354087 AGGTTTGTTTCTACTCCCTCCATT 59.646 41.667 0.00 0.00 0.00 3.16
2753 2787 4.700692 GGTTTGTTTCTACTCCCTCCATTC 59.299 45.833 0.00 0.00 0.00 2.67
2754 2788 4.569719 TTGTTTCTACTCCCTCCATTCC 57.430 45.455 0.00 0.00 0.00 3.01
2755 2789 3.803340 TGTTTCTACTCCCTCCATTCCT 58.197 45.455 0.00 0.00 0.00 3.36
2756 2790 4.955335 TGTTTCTACTCCCTCCATTCCTA 58.045 43.478 0.00 0.00 0.00 2.94
2757 2791 5.347124 TGTTTCTACTCCCTCCATTCCTAA 58.653 41.667 0.00 0.00 0.00 2.69
2758 2792 5.788533 TGTTTCTACTCCCTCCATTCCTAAA 59.211 40.000 0.00 0.00 0.00 1.85
2759 2793 6.447084 TGTTTCTACTCCCTCCATTCCTAAAT 59.553 38.462 0.00 0.00 0.00 1.40
2760 2794 7.626084 TGTTTCTACTCCCTCCATTCCTAAATA 59.374 37.037 0.00 0.00 0.00 1.40
2761 2795 8.661345 GTTTCTACTCCCTCCATTCCTAAATAT 58.339 37.037 0.00 0.00 0.00 1.28
2762 2796 8.814448 TTCTACTCCCTCCATTCCTAAATATT 57.186 34.615 0.00 0.00 0.00 1.28
2763 2797 8.814448 TCTACTCCCTCCATTCCTAAATATTT 57.186 34.615 5.89 5.89 0.00 1.40
2764 2798 8.660435 TCTACTCCCTCCATTCCTAAATATTTG 58.340 37.037 11.05 1.40 0.00 2.32
2765 2799 7.226059 ACTCCCTCCATTCCTAAATATTTGT 57.774 36.000 11.05 0.00 0.00 2.83
2766 2800 7.290813 ACTCCCTCCATTCCTAAATATTTGTC 58.709 38.462 11.05 0.00 0.00 3.18
2767 2801 7.129504 ACTCCCTCCATTCCTAAATATTTGTCT 59.870 37.037 11.05 0.00 0.00 3.41
2768 2802 7.882755 TCCCTCCATTCCTAAATATTTGTCTT 58.117 34.615 11.05 0.00 0.00 3.01
2769 2803 8.343787 TCCCTCCATTCCTAAATATTTGTCTTT 58.656 33.333 11.05 0.00 0.00 2.52
2770 2804 8.633561 CCCTCCATTCCTAAATATTTGTCTTTC 58.366 37.037 11.05 0.00 0.00 2.62
2771 2805 9.413734 CCTCCATTCCTAAATATTTGTCTTTCT 57.586 33.333 11.05 0.00 0.00 2.52
2787 2821 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
2798 2832 9.355215 AGAGATTTCAACAAGTAACTACATACG 57.645 33.333 0.00 0.00 0.00 3.06
2799 2833 8.475331 AGATTTCAACAAGTAACTACATACGG 57.525 34.615 0.00 0.00 0.00 4.02
2800 2834 8.308931 AGATTTCAACAAGTAACTACATACGGA 58.691 33.333 0.00 0.00 0.00 4.69
2801 2835 7.878477 TTTCAACAAGTAACTACATACGGAG 57.122 36.000 0.00 0.00 0.00 4.63
2802 2836 5.404946 TCAACAAGTAACTACATACGGAGC 58.595 41.667 0.00 0.00 0.00 4.70
2803 2837 5.047872 TCAACAAGTAACTACATACGGAGCA 60.048 40.000 0.00 0.00 0.00 4.26
2804 2838 5.395682 ACAAGTAACTACATACGGAGCAA 57.604 39.130 0.00 0.00 0.00 3.91
2805 2839 5.786311 ACAAGTAACTACATACGGAGCAAA 58.214 37.500 0.00 0.00 0.00 3.68
2806 2840 6.225318 ACAAGTAACTACATACGGAGCAAAA 58.775 36.000 0.00 0.00 0.00 2.44
2807 2841 6.877322 ACAAGTAACTACATACGGAGCAAAAT 59.123 34.615 0.00 0.00 0.00 1.82
2808 2842 6.903883 AGTAACTACATACGGAGCAAAATG 57.096 37.500 0.00 0.00 0.00 2.32
2809 2843 6.636705 AGTAACTACATACGGAGCAAAATGA 58.363 36.000 0.00 0.00 0.00 2.57
2810 2844 6.757010 AGTAACTACATACGGAGCAAAATGAG 59.243 38.462 0.00 0.00 0.00 2.90
2811 2845 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
2812 2846 5.109903 ACTACATACGGAGCAAAATGAGTC 58.890 41.667 0.00 0.00 0.00 3.36
2813 2847 3.937814 ACATACGGAGCAAAATGAGTCA 58.062 40.909 0.00 0.00 0.00 3.41
2814 2848 4.323417 ACATACGGAGCAAAATGAGTCAA 58.677 39.130 0.00 0.00 0.00 3.18
2815 2849 4.943705 ACATACGGAGCAAAATGAGTCAAT 59.056 37.500 0.00 0.00 0.00 2.57
2816 2850 5.065218 ACATACGGAGCAAAATGAGTCAATC 59.935 40.000 0.00 0.00 0.00 2.67
2817 2851 3.679389 ACGGAGCAAAATGAGTCAATCT 58.321 40.909 0.00 0.00 0.00 2.40
2818 2852 4.832248 ACGGAGCAAAATGAGTCAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
2819 2853 4.631813 ACGGAGCAAAATGAGTCAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
2820 2854 4.631377 CGGAGCAAAATGAGTCAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
2821 2855 5.446473 CGGAGCAAAATGAGTCAATCTACAC 60.446 44.000 0.00 0.00 0.00 2.90
2822 2856 5.645497 GGAGCAAAATGAGTCAATCTACACT 59.355 40.000 0.00 0.00 0.00 3.55
2823 2857 6.183360 GGAGCAAAATGAGTCAATCTACACTC 60.183 42.308 0.00 0.00 39.70 3.51
2824 2858 6.471146 AGCAAAATGAGTCAATCTACACTCT 58.529 36.000 0.00 0.00 39.92 3.24
2825 2859 7.615403 AGCAAAATGAGTCAATCTACACTCTA 58.385 34.615 0.00 0.00 39.92 2.43
2826 2860 8.097038 AGCAAAATGAGTCAATCTACACTCTAA 58.903 33.333 0.00 0.00 39.92 2.10
2827 2861 8.721478 GCAAAATGAGTCAATCTACACTCTAAA 58.279 33.333 0.00 0.00 39.92 1.85
2830 2864 9.778741 AAATGAGTCAATCTACACTCTAAAACA 57.221 29.630 0.00 0.00 39.92 2.83
2831 2865 9.950496 AATGAGTCAATCTACACTCTAAAACAT 57.050 29.630 0.00 0.00 39.92 2.71
2832 2866 8.763049 TGAGTCAATCTACACTCTAAAACATG 57.237 34.615 0.00 0.00 39.92 3.21
2833 2867 8.367911 TGAGTCAATCTACACTCTAAAACATGT 58.632 33.333 0.00 0.00 39.92 3.21
2834 2868 8.764524 AGTCAATCTACACTCTAAAACATGTC 57.235 34.615 0.00 0.00 0.00 3.06
2835 2869 8.589338 AGTCAATCTACACTCTAAAACATGTCT 58.411 33.333 0.00 0.00 0.00 3.41
2836 2870 9.856488 GTCAATCTACACTCTAAAACATGTCTA 57.144 33.333 0.00 0.00 0.00 2.59
2852 2886 9.639601 AAACATGTCTATATACATCCGTATGTG 57.360 33.333 3.56 0.00 45.99 3.21
2853 2887 7.772166 ACATGTCTATATACATCCGTATGTGG 58.228 38.462 3.56 0.00 45.99 4.17
2854 2888 7.396339 ACATGTCTATATACATCCGTATGTGGT 59.604 37.037 3.56 0.00 45.99 4.16
2855 2889 8.899771 CATGTCTATATACATCCGTATGTGGTA 58.100 37.037 3.56 0.00 45.99 3.25
2856 2890 8.502105 TGTCTATATACATCCGTATGTGGTAG 57.498 38.462 3.56 3.93 45.99 3.18
2857 2891 8.105197 TGTCTATATACATCCGTATGTGGTAGT 58.895 37.037 3.56 0.00 45.99 2.73
2858 2892 8.954350 GTCTATATACATCCGTATGTGGTAGTT 58.046 37.037 3.56 0.00 45.99 2.24
2859 2893 9.170734 TCTATATACATCCGTATGTGGTAGTTC 57.829 37.037 3.56 0.00 45.99 3.01
2860 2894 7.770366 ATATACATCCGTATGTGGTAGTTCA 57.230 36.000 3.56 0.00 45.99 3.18
2861 2895 6.665992 ATACATCCGTATGTGGTAGTTCAT 57.334 37.500 3.56 0.00 45.99 2.57
2862 2896 5.353394 ACATCCGTATGTGGTAGTTCATT 57.647 39.130 0.00 0.00 44.79 2.57
2863 2897 5.741011 ACATCCGTATGTGGTAGTTCATTT 58.259 37.500 0.00 0.00 44.79 2.32
2864 2898 5.584649 ACATCCGTATGTGGTAGTTCATTTG 59.415 40.000 0.00 0.00 44.79 2.32
2865 2899 5.408880 TCCGTATGTGGTAGTTCATTTGA 57.591 39.130 0.00 0.00 0.00 2.69
2866 2900 5.795972 TCCGTATGTGGTAGTTCATTTGAA 58.204 37.500 0.00 0.00 0.00 2.69
2867 2901 6.231951 TCCGTATGTGGTAGTTCATTTGAAA 58.768 36.000 0.00 0.00 35.58 2.69
2868 2902 6.882140 TCCGTATGTGGTAGTTCATTTGAAAT 59.118 34.615 0.00 0.00 35.58 2.17
2869 2903 7.065324 TCCGTATGTGGTAGTTCATTTGAAATC 59.935 37.037 0.00 0.00 35.58 2.17
2870 2904 7.065803 CCGTATGTGGTAGTTCATTTGAAATCT 59.934 37.037 0.00 0.00 35.58 2.40
2871 2905 8.116753 CGTATGTGGTAGTTCATTTGAAATCTC 58.883 37.037 0.00 0.00 35.58 2.75
2872 2906 9.167311 GTATGTGGTAGTTCATTTGAAATCTCT 57.833 33.333 0.00 0.00 35.58 3.10
2874 2908 9.739276 ATGTGGTAGTTCATTTGAAATCTCTAA 57.261 29.630 0.00 0.00 35.58 2.10
2875 2909 9.567776 TGTGGTAGTTCATTTGAAATCTCTAAA 57.432 29.630 0.00 0.00 35.58 1.85
2900 2934 8.581253 AAAGACAAATATTTAGGAACAGAGGG 57.419 34.615 0.00 0.00 0.00 4.30
2901 2935 7.510675 AGACAAATATTTAGGAACAGAGGGA 57.489 36.000 0.00 0.00 0.00 4.20
2902 2936 7.569240 AGACAAATATTTAGGAACAGAGGGAG 58.431 38.462 0.00 0.00 0.00 4.30
3046 3086 4.082625 TGAAGTTATTGTTCTCGCGGAGTA 60.083 41.667 6.13 0.00 0.00 2.59
3067 3107 7.934120 GGAGTAGGTTATACTGAATTCATGCTT 59.066 37.037 8.96 0.00 0.00 3.91
3105 3145 0.610687 GTCTGAACTGTGGGAGAGGG 59.389 60.000 0.00 0.00 0.00 4.30
3107 3147 1.059913 CTGAACTGTGGGAGAGGGTT 58.940 55.000 0.00 0.00 0.00 4.11
3163 3203 6.798482 TCCAGTTTTATGAAGCATAGCAATG 58.202 36.000 0.00 0.00 36.09 2.82
3442 3503 1.362224 CTGGAAGGTGGGGAGAAAGA 58.638 55.000 0.00 0.00 0.00 2.52
3443 3504 1.280421 CTGGAAGGTGGGGAGAAAGAG 59.720 57.143 0.00 0.00 0.00 2.85
3446 3512 2.578480 GGAAGGTGGGGAGAAAGAGAAT 59.422 50.000 0.00 0.00 0.00 2.40
3546 3617 6.989155 AAATCCCATGATCTGTTATGCATT 57.011 33.333 3.54 0.00 0.00 3.56
3548 3619 6.585695 ATCCCATGATCTGTTATGCATTTC 57.414 37.500 3.54 0.00 0.00 2.17
3549 3620 5.698104 TCCCATGATCTGTTATGCATTTCT 58.302 37.500 3.54 0.00 0.00 2.52
3550 3621 5.533528 TCCCATGATCTGTTATGCATTTCTG 59.466 40.000 3.54 3.05 0.00 3.02
3551 3622 5.533528 CCCATGATCTGTTATGCATTTCTGA 59.466 40.000 3.54 8.52 0.00 3.27
3558 3629 6.711277 TCTGTTATGCATTTCTGACCTACTT 58.289 36.000 3.54 0.00 0.00 2.24
3561 3632 6.595326 TGTTATGCATTTCTGACCTACTTCAG 59.405 38.462 3.54 0.00 43.93 3.02
3562 3633 3.338249 TGCATTTCTGACCTACTTCAGC 58.662 45.455 0.00 0.00 42.52 4.26
3563 3634 3.008375 TGCATTTCTGACCTACTTCAGCT 59.992 43.478 0.00 0.00 42.52 4.24
3564 3635 3.373439 GCATTTCTGACCTACTTCAGCTG 59.627 47.826 7.63 7.63 42.52 4.24
3577 3648 5.635417 ACTTCAGCTGCTTCTTAAAATCC 57.365 39.130 9.47 0.00 0.00 3.01
3579 3650 3.009723 TCAGCTGCTTCTTAAAATCCCG 58.990 45.455 9.47 0.00 0.00 5.14
3589 3660 6.802348 GCTTCTTAAAATCCCGTCTTCTTTTC 59.198 38.462 0.00 0.00 0.00 2.29
3591 3662 5.410439 TCTTAAAATCCCGTCTTCTTTTCCG 59.590 40.000 0.00 0.00 0.00 4.30
3601 3672 3.000727 TCTTCTTTTCCGGCGAGAATTC 58.999 45.455 9.30 0.00 0.00 2.17
3609 3680 1.661112 CCGGCGAGAATTCTTCACTTC 59.339 52.381 9.30 0.00 0.00 3.01
3816 3889 3.535561 TCCATCCATTTCGAGCTTTCTC 58.464 45.455 0.00 0.00 35.99 2.87
3853 3926 6.481954 ACAAGATAACAAGAATCCGTGTTC 57.518 37.500 3.56 0.00 42.47 3.18
3873 3946 2.935740 GCCCACTTGCCTTCTTGCC 61.936 63.158 0.00 0.00 0.00 4.52
3874 3947 1.228675 CCCACTTGCCTTCTTGCCT 60.229 57.895 0.00 0.00 0.00 4.75
3877 3950 1.035139 CACTTGCCTTCTTGCCTTGT 58.965 50.000 0.00 0.00 0.00 3.16
4006 4079 2.550277 TTGCCCTGAGATCCTGTCTA 57.450 50.000 0.00 0.00 37.29 2.59
4007 4080 1.781786 TGCCCTGAGATCCTGTCTAC 58.218 55.000 0.00 0.00 37.29 2.59
4057 4130 1.672363 CAGTTGCAGACAAGAACAGCA 59.328 47.619 0.00 0.00 36.16 4.41
4077 4153 2.673523 GCCAGGTCCAGCATGAGT 59.326 61.111 0.00 0.00 39.69 3.41
4096 4172 4.864704 AGTCTGAACTCTGAAGAAGGTC 57.135 45.455 0.00 0.00 0.00 3.85
4105 4181 1.998315 CTGAAGAAGGTCTGATGTGCG 59.002 52.381 0.00 0.00 0.00 5.34
4128 4204 2.031595 AGCTATATCACACTCGTCGCAG 60.032 50.000 0.00 0.00 0.00 5.18
4131 4207 0.096454 TATCACACTCGTCGCAGTCG 59.904 55.000 0.00 0.00 41.01 4.18
4143 4219 3.059982 CAGTCGAGTGCCCCTTCA 58.940 61.111 7.43 0.00 0.00 3.02
4148 4227 2.936032 GAGTGCCCCTTCACCCCT 60.936 66.667 0.00 0.00 37.68 4.79
4167 4246 3.829226 CCCCTGAGCCCATGCCAT 61.829 66.667 0.00 0.00 38.69 4.40
4185 4264 0.973632 ATTACCAGTGCGTCTCCACA 59.026 50.000 0.00 0.00 38.18 4.17
4314 4393 4.643387 GCCGTGCAACAGGAGGGT 62.643 66.667 8.16 0.00 35.74 4.34
4335 4414 0.248458 CTGTTGTTGCCGTCACCAAC 60.248 55.000 0.00 0.00 43.33 3.77
4647 4726 3.052082 CTCAAGGTGTGGCGCCTG 61.052 66.667 29.70 16.68 44.35 4.85
4727 4806 4.456253 CGTGTCGTCGGACGGGAG 62.456 72.222 28.07 14.45 46.49 4.30
4764 4843 2.577059 GACCGGACGATCAAGGCA 59.423 61.111 9.46 0.00 0.00 4.75
4796 4875 3.394836 GGGGCAGAAGAGGCTCGT 61.395 66.667 9.22 5.58 30.58 4.18
5027 5106 4.129737 CGCGGACAGGACGGTGAT 62.130 66.667 0.00 0.00 0.00 3.06
5374 5454 1.200020 GATCGGGCCTTTGTTTCACTG 59.800 52.381 0.84 0.00 0.00 3.66
5401 5482 2.371841 TCTTGTGTACTTCCATGGTGCT 59.628 45.455 12.58 0.00 0.00 4.40
5509 5594 5.006165 GTCTCAGCTAGTTTGTCATATGTGC 59.994 44.000 1.90 0.00 0.00 4.57
5510 5595 4.831107 TCAGCTAGTTTGTCATATGTGCA 58.169 39.130 1.90 0.78 0.00 4.57
5619 9486 6.959639 ATGATGATAACCGGTTTGCTATTT 57.040 33.333 27.64 0.00 0.00 1.40
5629 9496 3.432252 CGGTTTGCTATTTCTCAGTCGTT 59.568 43.478 0.00 0.00 0.00 3.85
5630 9497 4.624024 CGGTTTGCTATTTCTCAGTCGTTA 59.376 41.667 0.00 0.00 0.00 3.18
5631 9498 5.220228 CGGTTTGCTATTTCTCAGTCGTTAG 60.220 44.000 0.00 0.00 0.00 2.34
5632 9499 5.867716 GGTTTGCTATTTCTCAGTCGTTAGA 59.132 40.000 0.00 0.00 0.00 2.10
5633 9500 6.367969 GGTTTGCTATTTCTCAGTCGTTAGAA 59.632 38.462 0.00 0.00 0.00 2.10
5666 9537 8.321353 ACTTCTTGGTCAAGTTATATGTGATCA 58.679 33.333 10.10 0.00 39.38 2.92
5672 9543 7.147320 TGGTCAAGTTATATGTGATCAATCCCT 60.147 37.037 0.00 0.00 29.57 4.20
5675 9546 8.493607 TCAAGTTATATGTGATCAATCCCTCAA 58.506 33.333 0.00 0.00 0.00 3.02
5677 9548 8.915057 AGTTATATGTGATCAATCCCTCAAAG 57.085 34.615 0.00 0.00 0.00 2.77
5678 9549 8.717717 AGTTATATGTGATCAATCCCTCAAAGA 58.282 33.333 0.00 0.00 0.00 2.52
5682 9553 6.579666 TGTGATCAATCCCTCAAAGAAAAG 57.420 37.500 0.00 0.00 0.00 2.27
5683 9554 6.070656 TGTGATCAATCCCTCAAAGAAAAGT 58.929 36.000 0.00 0.00 0.00 2.66
5684 9555 6.550854 TGTGATCAATCCCTCAAAGAAAAGTT 59.449 34.615 0.00 0.00 0.00 2.66
5685 9556 7.723616 TGTGATCAATCCCTCAAAGAAAAGTTA 59.276 33.333 0.00 0.00 0.00 2.24
5686 9557 8.743714 GTGATCAATCCCTCAAAGAAAAGTTAT 58.256 33.333 0.00 0.00 0.00 1.89
5687 9558 9.312904 TGATCAATCCCTCAAAGAAAAGTTATT 57.687 29.630 0.00 0.00 0.00 1.40
5688 9559 9.578439 GATCAATCCCTCAAAGAAAAGTTATTG 57.422 33.333 0.00 0.00 0.00 1.90
5689 9560 8.477419 TCAATCCCTCAAAGAAAAGTTATTGT 57.523 30.769 0.00 0.00 0.00 2.71
5690 9561 8.923270 TCAATCCCTCAAAGAAAAGTTATTGTT 58.077 29.630 0.00 0.00 0.00 2.83
5691 9562 9.196552 CAATCCCTCAAAGAAAAGTTATTGTTC 57.803 33.333 0.00 0.00 0.00 3.18
5692 9563 8.712228 ATCCCTCAAAGAAAAGTTATTGTTCT 57.288 30.769 0.00 0.00 33.01 3.01
5693 9564 8.533569 TCCCTCAAAGAAAAGTTATTGTTCTT 57.466 30.769 0.00 0.00 42.07 2.52
5694 9565 8.413229 TCCCTCAAAGAAAAGTTATTGTTCTTG 58.587 33.333 1.91 0.00 39.97 3.02
5695 9566 8.413229 CCCTCAAAGAAAAGTTATTGTTCTTGA 58.587 33.333 1.91 2.37 39.97 3.02
5696 9567 9.801873 CCTCAAAGAAAAGTTATTGTTCTTGAA 57.198 29.630 1.91 0.00 39.97 2.69
5832 9703 0.872388 GGTTAGTTGGCTTGTCACGG 59.128 55.000 0.00 0.00 0.00 4.94
5853 9724 6.208007 CACGGAAGACACCACCTGTATATATA 59.792 42.308 0.00 0.00 31.03 0.86
5947 9818 1.077644 TCTCGCTTCCGCTCTAGGT 60.078 57.895 0.00 0.00 0.00 3.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 2.691526 TGTATAGGTGCACTAGTTCGGG 59.308 50.000 17.98 0.00 34.56 5.14
70 73 4.975132 TGTCCACAACACACCCAG 57.025 55.556 0.00 0.00 31.20 4.45
82 85 9.258826 CAAATAACAATGAATCTTTTGTGTCCA 57.741 29.630 3.62 0.00 36.26 4.02
91 94 6.875195 CCTGCAACCAAATAACAATGAATCTT 59.125 34.615 0.00 0.00 0.00 2.40
95 98 4.346418 ACCCTGCAACCAAATAACAATGAA 59.654 37.500 0.00 0.00 0.00 2.57
98 101 4.102367 ACAACCCTGCAACCAAATAACAAT 59.898 37.500 0.00 0.00 0.00 2.71
152 155 4.777463 ACCTAAGGTTTATCAATCCGTGG 58.223 43.478 0.00 0.00 27.29 4.94
184 187 3.691609 CAGGACAGTAGCAAATTTCCCTC 59.308 47.826 0.00 0.00 0.00 4.30
214 217 0.685785 TGTTGGGCCTTCAAGTGCAA 60.686 50.000 4.53 0.00 0.00 4.08
223 226 0.470766 TGTAGACGTTGTTGGGCCTT 59.529 50.000 4.53 0.00 0.00 4.35
235 238 4.872664 AGACAACCTTCTTCTTGTAGACG 58.127 43.478 0.00 0.00 30.59 4.18
256 259 1.338337 CCCCACGCTGATGTCTACTAG 59.662 57.143 0.00 0.00 0.00 2.57
513 525 4.710695 CCGTACCACGCACGCTCA 62.711 66.667 0.00 0.00 40.91 4.26
871 885 4.354212 CGTGCACAGCAACCGTCG 62.354 66.667 18.64 0.00 41.47 5.12
872 886 4.666532 GCGTGCACAGCAACCGTC 62.667 66.667 22.75 0.47 41.47 4.79
875 889 4.962122 CGTGCGTGCACAGCAACC 62.962 66.667 28.80 19.71 46.97 3.77
880 894 4.671549 CCTTGCGTGCGTGCACAG 62.672 66.667 23.26 16.51 46.25 3.66
962 976 4.796231 CCTCTCCGGCGTTGGTCG 62.796 72.222 6.01 0.00 41.99 4.79
1011 1025 1.956170 ACCTCTTGTGCACTTCGCG 60.956 57.895 19.41 0.00 46.97 5.87
1036 1050 2.568696 TCTCTCTCTTCGGCATTTCG 57.431 50.000 0.00 0.00 0.00 3.46
1045 1059 3.662759 TCCTCCTCCTTCTCTCTCTTC 57.337 52.381 0.00 0.00 0.00 2.87
1046 1060 3.596046 TCTTCCTCCTCCTTCTCTCTCTT 59.404 47.826 0.00 0.00 0.00 2.85
1068 1083 2.619849 CCCACCTGTCAGCATCAATCTT 60.620 50.000 0.00 0.00 0.00 2.40
1091 1106 0.976641 ACGCCTTTCTGACAGGATGA 59.023 50.000 13.93 0.00 39.69 2.92
1127 1142 2.046285 CCATGTCGGGAAAGTGCCC 61.046 63.158 0.00 0.00 45.10 5.36
1128 1143 0.035820 TACCATGTCGGGAAAGTGCC 60.036 55.000 0.00 0.00 40.22 5.01
1137 1152 8.314143 TCTTTAACTAAAAACTACCATGTCGG 57.686 34.615 0.00 0.00 42.50 4.79
1168 1183 7.507733 TTATGCCGAAAACTACCACTTTTTA 57.492 32.000 0.00 0.00 0.00 1.52
1169 1184 4.929819 ATGCCGAAAACTACCACTTTTT 57.070 36.364 0.00 0.00 0.00 1.94
1177 1192 9.401873 ACTTTACAAATTTATGCCGAAAACTAC 57.598 29.630 0.00 0.00 0.00 2.73
1208 1223 7.886629 ACTATCACATTTCATGCCTACAAAT 57.113 32.000 0.00 0.00 0.00 2.32
1273 1297 0.692476 TGGACAGGGACATGGACTTG 59.308 55.000 0.00 0.00 0.00 3.16
1497 1521 1.229428 ACACGAGTGCATGTTCCTTG 58.771 50.000 2.76 0.00 0.00 3.61
1590 1614 8.801299 CCATTTAAGCAGAGATGTAGAGATAGA 58.199 37.037 0.00 0.00 0.00 1.98
1697 1721 6.445357 TGCTTCGTATGTAGTCTATGTTGA 57.555 37.500 0.00 0.00 0.00 3.18
1714 1738 3.795561 AGATTCACTCGTTTTGCTTCG 57.204 42.857 0.00 0.00 0.00 3.79
1717 1741 4.632153 AGTGTAGATTCACTCGTTTTGCT 58.368 39.130 0.00 0.00 44.07 3.91
1810 1835 2.496470 ACCGTTGGATGTTACTCTCTCC 59.504 50.000 0.00 0.00 0.00 3.71
1864 1889 5.641209 CCTCTAAAAGTCTCCATGTCACTTG 59.359 44.000 2.81 0.00 30.63 3.16
1929 1954 5.051173 GCATTCGGCATATTCATAGATCTCG 60.051 44.000 0.00 0.00 43.97 4.04
2460 2490 6.762480 ACAGATCTGTTCTTGGTTGCCCAA 62.762 45.833 22.89 0.00 44.22 4.12
2461 2491 1.425066 AGATCTGTTCTTGGTTGCCCA 59.575 47.619 0.00 0.00 39.65 5.36
2471 2501 2.428530 TGATGCGCTACAGATCTGTTCT 59.571 45.455 32.14 11.51 41.83 3.01
2486 2516 2.260844 AATGGGATACAGGTGATGCG 57.739 50.000 0.00 0.00 39.74 4.73
2698 2729 6.563753 CGTTGTTGTTTTATGGGAAAGCATTG 60.564 38.462 0.00 0.00 0.00 2.82
2699 2730 5.465056 CGTTGTTGTTTTATGGGAAAGCATT 59.535 36.000 0.00 0.00 0.00 3.56
2700 2731 4.987912 CGTTGTTGTTTTATGGGAAAGCAT 59.012 37.500 0.00 0.00 0.00 3.79
2741 2775 7.129504 AGACAAATATTTAGGAATGGAGGGAGT 59.870 37.037 0.00 0.00 0.00 3.85
2742 2776 7.521669 AGACAAATATTTAGGAATGGAGGGAG 58.478 38.462 0.00 0.00 0.00 4.30
2743 2777 7.465900 AGACAAATATTTAGGAATGGAGGGA 57.534 36.000 0.00 0.00 0.00 4.20
2744 2778 8.539117 AAAGACAAATATTTAGGAATGGAGGG 57.461 34.615 0.00 0.00 0.00 4.30
2745 2779 9.413734 AGAAAGACAAATATTTAGGAATGGAGG 57.586 33.333 0.00 0.00 0.00 4.30
2761 2795 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
2762 2796 8.964476 ACTTGTTGAAATCTCTAGAAAGACAA 57.036 30.769 0.00 0.00 0.00 3.18
2772 2806 9.355215 CGTATGTAGTTACTTGTTGAAATCTCT 57.645 33.333 0.00 0.00 0.00 3.10
2773 2807 8.592998 CCGTATGTAGTTACTTGTTGAAATCTC 58.407 37.037 0.00 0.00 0.00 2.75
2774 2808 8.308931 TCCGTATGTAGTTACTTGTTGAAATCT 58.691 33.333 0.00 0.00 0.00 2.40
2775 2809 8.470040 TCCGTATGTAGTTACTTGTTGAAATC 57.530 34.615 0.00 0.00 0.00 2.17
2776 2810 7.064253 GCTCCGTATGTAGTTACTTGTTGAAAT 59.936 37.037 0.00 0.00 0.00 2.17
2777 2811 6.366877 GCTCCGTATGTAGTTACTTGTTGAAA 59.633 38.462 0.00 0.00 0.00 2.69
2778 2812 5.865552 GCTCCGTATGTAGTTACTTGTTGAA 59.134 40.000 0.00 0.00 0.00 2.69
2779 2813 5.047872 TGCTCCGTATGTAGTTACTTGTTGA 60.048 40.000 0.00 0.00 0.00 3.18
2780 2814 5.165676 TGCTCCGTATGTAGTTACTTGTTG 58.834 41.667 0.00 0.00 0.00 3.33
2781 2815 5.395682 TGCTCCGTATGTAGTTACTTGTT 57.604 39.130 0.00 0.00 0.00 2.83
2782 2816 5.395682 TTGCTCCGTATGTAGTTACTTGT 57.604 39.130 0.00 0.00 0.00 3.16
2783 2817 6.715344 TTTTGCTCCGTATGTAGTTACTTG 57.285 37.500 0.00 0.00 0.00 3.16
2784 2818 7.101054 TCATTTTGCTCCGTATGTAGTTACTT 58.899 34.615 0.00 0.00 0.00 2.24
2785 2819 6.636705 TCATTTTGCTCCGTATGTAGTTACT 58.363 36.000 0.00 0.00 0.00 2.24
2786 2820 6.534079 ACTCATTTTGCTCCGTATGTAGTTAC 59.466 38.462 0.00 0.00 0.00 2.50
2787 2821 6.636705 ACTCATTTTGCTCCGTATGTAGTTA 58.363 36.000 0.00 0.00 0.00 2.24
2788 2822 5.488341 ACTCATTTTGCTCCGTATGTAGTT 58.512 37.500 0.00 0.00 0.00 2.24
2789 2823 5.086104 ACTCATTTTGCTCCGTATGTAGT 57.914 39.130 0.00 0.00 0.00 2.73
2790 2824 5.109210 TGACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
2791 2825 5.079689 TGACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
2792 2826 3.937814 TGACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
2793 2827 4.944962 TTGACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
2794 2828 5.431765 AGATTGACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
2795 2829 4.832248 AGATTGACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
2796 2830 3.679389 AGATTGACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
2797 2831 4.631377 TGTAGATTGACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
2798 2832 5.645497 AGTGTAGATTGACTCATTTTGCTCC 59.355 40.000 0.00 0.00 0.00 4.70
2799 2833 6.593382 AGAGTGTAGATTGACTCATTTTGCTC 59.407 38.462 0.00 0.00 41.01 4.26
2800 2834 6.471146 AGAGTGTAGATTGACTCATTTTGCT 58.529 36.000 0.00 0.00 41.01 3.91
2801 2835 6.734104 AGAGTGTAGATTGACTCATTTTGC 57.266 37.500 0.00 0.00 41.01 3.68
2804 2838 9.778741 TGTTTTAGAGTGTAGATTGACTCATTT 57.221 29.630 0.00 0.00 41.01 2.32
2805 2839 9.950496 ATGTTTTAGAGTGTAGATTGACTCATT 57.050 29.630 0.00 0.00 41.01 2.57
2806 2840 9.376075 CATGTTTTAGAGTGTAGATTGACTCAT 57.624 33.333 0.00 0.00 41.01 2.90
2807 2841 8.367911 ACATGTTTTAGAGTGTAGATTGACTCA 58.632 33.333 0.00 0.00 41.01 3.41
2808 2842 8.764524 ACATGTTTTAGAGTGTAGATTGACTC 57.235 34.615 0.00 0.00 39.18 3.36
2809 2843 8.589338 AGACATGTTTTAGAGTGTAGATTGACT 58.411 33.333 0.00 0.00 0.00 3.41
2810 2844 8.764524 AGACATGTTTTAGAGTGTAGATTGAC 57.235 34.615 0.00 0.00 0.00 3.18
2826 2860 9.639601 CACATACGGATGTATATAGACATGTTT 57.360 33.333 17.40 3.45 44.82 2.83
2827 2861 8.251026 CCACATACGGATGTATATAGACATGTT 58.749 37.037 17.40 4.40 44.82 2.71
2828 2862 7.396339 ACCACATACGGATGTATATAGACATGT 59.604 37.037 17.40 12.10 44.82 3.21
2829 2863 7.772166 ACCACATACGGATGTATATAGACATG 58.228 38.462 17.40 6.96 44.82 3.21
2830 2864 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
2831 2865 8.105197 ACTACCACATACGGATGTATATAGACA 58.895 37.037 22.62 2.07 44.82 3.41
2832 2866 8.503458 ACTACCACATACGGATGTATATAGAC 57.497 38.462 22.62 0.00 44.82 2.59
2833 2867 9.170734 GAACTACCACATACGGATGTATATAGA 57.829 37.037 22.62 5.04 44.82 1.98
2834 2868 8.953313 TGAACTACCACATACGGATGTATATAG 58.047 37.037 14.23 16.35 44.82 1.31
2835 2869 8.866970 TGAACTACCACATACGGATGTATATA 57.133 34.615 14.23 5.36 44.82 0.86
2836 2870 7.770366 TGAACTACCACATACGGATGTATAT 57.230 36.000 14.23 4.37 44.82 0.86
2837 2871 7.770366 ATGAACTACCACATACGGATGTATA 57.230 36.000 14.23 8.27 44.82 1.47
2838 2872 6.665992 ATGAACTACCACATACGGATGTAT 57.334 37.500 14.23 7.46 44.82 2.29
2839 2873 6.474140 AATGAACTACCACATACGGATGTA 57.526 37.500 14.23 0.00 44.82 2.29
2841 2875 5.815222 TCAAATGAACTACCACATACGGATG 59.185 40.000 5.94 5.94 39.16 3.51
2842 2876 5.984725 TCAAATGAACTACCACATACGGAT 58.015 37.500 0.00 0.00 0.00 4.18
2843 2877 5.408880 TCAAATGAACTACCACATACGGA 57.591 39.130 0.00 0.00 0.00 4.69
2844 2878 6.489127 TTTCAAATGAACTACCACATACGG 57.511 37.500 0.00 0.00 33.13 4.02
2845 2879 7.974675 AGATTTCAAATGAACTACCACATACG 58.025 34.615 0.00 0.00 33.13 3.06
2846 2880 9.167311 AGAGATTTCAAATGAACTACCACATAC 57.833 33.333 0.00 0.00 33.13 2.39
2848 2882 9.739276 TTAGAGATTTCAAATGAACTACCACAT 57.261 29.630 0.00 0.00 33.13 3.21
2849 2883 9.567776 TTTAGAGATTTCAAATGAACTACCACA 57.432 29.630 0.00 0.00 33.13 4.17
2874 2908 9.025041 CCCTCTGTTCCTAAATATTTGTCTTTT 57.975 33.333 11.05 0.00 0.00 2.27
2875 2909 8.390921 TCCCTCTGTTCCTAAATATTTGTCTTT 58.609 33.333 11.05 0.00 0.00 2.52
2876 2910 7.928873 TCCCTCTGTTCCTAAATATTTGTCTT 58.071 34.615 11.05 0.00 0.00 3.01
2877 2911 7.182930 ACTCCCTCTGTTCCTAAATATTTGTCT 59.817 37.037 11.05 0.00 0.00 3.41
2878 2912 7.339482 ACTCCCTCTGTTCCTAAATATTTGTC 58.661 38.462 11.05 0.00 0.00 3.18
2879 2913 7.272144 ACTCCCTCTGTTCCTAAATATTTGT 57.728 36.000 11.05 0.00 0.00 2.83
2880 2914 8.705594 TCTACTCCCTCTGTTCCTAAATATTTG 58.294 37.037 11.05 1.40 0.00 2.32
2881 2915 8.855804 TCTACTCCCTCTGTTCCTAAATATTT 57.144 34.615 5.89 5.89 0.00 1.40
2882 2916 9.095700 GATCTACTCCCTCTGTTCCTAAATATT 57.904 37.037 0.00 0.00 0.00 1.28
2883 2917 8.235230 TGATCTACTCCCTCTGTTCCTAAATAT 58.765 37.037 0.00 0.00 0.00 1.28
2884 2918 7.592736 TGATCTACTCCCTCTGTTCCTAAATA 58.407 38.462 0.00 0.00 0.00 1.40
2885 2919 6.444704 TGATCTACTCCCTCTGTTCCTAAAT 58.555 40.000 0.00 0.00 0.00 1.40
2886 2920 5.838955 TGATCTACTCCCTCTGTTCCTAAA 58.161 41.667 0.00 0.00 0.00 1.85
2887 2921 5.467668 TGATCTACTCCCTCTGTTCCTAA 57.532 43.478 0.00 0.00 0.00 2.69
2888 2922 5.671463 ATGATCTACTCCCTCTGTTCCTA 57.329 43.478 0.00 0.00 0.00 2.94
2889 2923 4.551215 ATGATCTACTCCCTCTGTTCCT 57.449 45.455 0.00 0.00 0.00 3.36
2890 2924 6.325286 ACTTAATGATCTACTCCCTCTGTTCC 59.675 42.308 0.00 0.00 0.00 3.62
2891 2925 7.354751 ACTTAATGATCTACTCCCTCTGTTC 57.645 40.000 0.00 0.00 0.00 3.18
2892 2926 7.741554 AACTTAATGATCTACTCCCTCTGTT 57.258 36.000 0.00 0.00 0.00 3.16
2893 2927 7.741554 AAACTTAATGATCTACTCCCTCTGT 57.258 36.000 0.00 0.00 0.00 3.41
2894 2928 8.919145 AGTAAACTTAATGATCTACTCCCTCTG 58.081 37.037 0.00 0.00 0.00 3.35
2895 2929 9.138596 GAGTAAACTTAATGATCTACTCCCTCT 57.861 37.037 0.00 0.00 32.62 3.69
2896 2930 8.361889 GGAGTAAACTTAATGATCTACTCCCTC 58.638 40.741 16.98 2.47 45.05 4.30
2897 2931 8.252624 GGAGTAAACTTAATGATCTACTCCCT 57.747 38.462 16.98 0.00 45.05 4.20
3046 3086 7.798596 CTGAAGCATGAATTCAGTATAACCT 57.201 36.000 23.17 0.00 45.58 3.50
3067 3107 7.806409 TCAGACTTTTGAATGAATTGACTGA 57.194 32.000 0.00 0.00 0.00 3.41
3105 3145 4.130118 CCTGCTGGAGTATAATGTCCAAC 58.870 47.826 2.92 0.00 42.41 3.77
3107 3147 3.384168 ACCTGCTGGAGTATAATGTCCA 58.616 45.455 17.64 0.00 40.72 4.02
3163 3203 6.915843 ACAAATCAGTACCGATTTTGTTGAAC 59.084 34.615 13.28 0.00 41.71 3.18
3442 3503 9.857656 TCCTATAGCTTCATTTCATTTCATTCT 57.142 29.630 0.00 0.00 0.00 2.40
3474 3544 3.448686 CTTGCTAGTTCCGGAGTACATG 58.551 50.000 3.34 0.00 0.00 3.21
3546 3617 2.251818 AGCAGCTGAAGTAGGTCAGAA 58.748 47.619 20.43 0.00 46.76 3.02
3548 3619 2.233431 AGAAGCAGCTGAAGTAGGTCAG 59.767 50.000 20.43 0.00 46.58 3.51
3549 3620 2.251818 AGAAGCAGCTGAAGTAGGTCA 58.748 47.619 20.43 0.00 34.17 4.02
3550 3621 3.326836 AAGAAGCAGCTGAAGTAGGTC 57.673 47.619 20.43 2.87 34.17 3.85
3551 3622 4.891992 TTAAGAAGCAGCTGAAGTAGGT 57.108 40.909 20.43 0.00 37.70 3.08
3558 3629 3.009723 CGGGATTTTAAGAAGCAGCTGA 58.990 45.455 20.43 0.00 0.00 4.26
3561 3632 3.010420 AGACGGGATTTTAAGAAGCAGC 58.990 45.455 0.00 0.00 0.00 5.25
3562 3633 4.938226 AGAAGACGGGATTTTAAGAAGCAG 59.062 41.667 0.00 0.00 0.00 4.24
3563 3634 4.906618 AGAAGACGGGATTTTAAGAAGCA 58.093 39.130 0.00 0.00 0.00 3.91
3564 3635 5.881777 AAGAAGACGGGATTTTAAGAAGC 57.118 39.130 0.00 0.00 0.00 3.86
3579 3650 1.792006 TTCTCGCCGGAAAAGAAGAC 58.208 50.000 5.05 0.00 0.00 3.01
3601 3672 7.762615 TGTTATTTATCGTACAGGGAAGTGAAG 59.237 37.037 0.00 0.00 0.00 3.02
3609 3680 5.583061 TGCAGTTGTTATTTATCGTACAGGG 59.417 40.000 0.00 0.00 0.00 4.45
3873 3946 5.063944 AGTGACGCATCTTTATAGCAACAAG 59.936 40.000 0.00 0.00 0.00 3.16
3874 3947 4.935205 AGTGACGCATCTTTATAGCAACAA 59.065 37.500 0.00 0.00 0.00 2.83
3877 3950 3.796717 CGAGTGACGCATCTTTATAGCAA 59.203 43.478 0.00 0.00 34.51 3.91
4006 4079 8.537728 TGAAATCATGGATTAAAATAGCAGGT 57.462 30.769 0.00 0.00 31.46 4.00
4007 4080 9.635520 GATGAAATCATGGATTAAAATAGCAGG 57.364 33.333 0.00 0.00 44.70 4.85
4057 4130 2.207501 CTCATGCTGGACCTGGCCTT 62.208 60.000 3.32 0.00 0.00 4.35
4077 4153 4.474394 TCAGACCTTCTTCAGAGTTCAGA 58.526 43.478 0.00 0.00 0.00 3.27
4096 4172 4.301628 TGTGATATAGCTTCGCACATCAG 58.698 43.478 0.00 0.00 34.85 2.90
4105 4181 2.974536 GCGACGAGTGTGATATAGCTTC 59.025 50.000 0.00 0.00 0.00 3.86
4109 4185 3.546617 GACTGCGACGAGTGTGATATAG 58.453 50.000 0.00 0.00 0.00 1.31
4128 4204 2.047179 GGTGAAGGGGCACTCGAC 60.047 66.667 0.00 0.00 38.78 4.20
4131 4207 2.485780 GAAGGGGTGAAGGGGCACTC 62.486 65.000 0.00 0.00 38.55 3.51
4148 4227 3.743017 GGCATGGGCTCAGGGGAA 61.743 66.667 0.00 0.00 40.87 3.97
4166 4245 3.834732 GTGGAGACGCACTGGTAAT 57.165 52.632 0.00 0.00 41.67 1.89
4185 4264 2.284995 GAGGAGTGGCCCCTGAGT 60.285 66.667 3.42 0.00 37.37 3.41
4297 4376 4.643387 ACCCTCCTGTTGCACGGC 62.643 66.667 0.00 0.00 0.00 5.68
4314 4393 0.393132 TGGTGACGGCAACAACAGAA 60.393 50.000 6.48 0.00 39.17 3.02
4335 4414 2.408271 TGAGGCACTTTATGGAGCTG 57.592 50.000 0.00 0.00 41.55 4.24
4726 4805 3.437795 CGACCCGGTGTAGACGCT 61.438 66.667 0.00 0.00 0.00 5.07
4727 4806 4.487412 CCGACCCGGTGTAGACGC 62.487 72.222 0.00 0.00 42.73 5.19
4866 4945 3.111939 CACGAGCCGGAGTAGAGG 58.888 66.667 5.05 0.00 0.00 3.69
5374 5454 4.881850 CCATGGAAGTACACAAGATAACCC 59.118 45.833 5.56 0.00 0.00 4.11
5401 5482 2.716424 AGATCAGTGACCTCCCCAAAAA 59.284 45.455 0.00 0.00 0.00 1.94
5483 5568 6.760298 CACATATGACAAACTAGCTGAGACAT 59.240 38.462 10.38 0.00 0.00 3.06
5509 5594 7.065443 CCACTAGTGCATATATTCATGGACATG 59.935 40.741 17.86 5.95 46.37 3.21
5510 5595 7.108194 CCACTAGTGCATATATTCATGGACAT 58.892 38.462 17.86 2.00 46.37 3.06
5571 9438 3.496884 GCACAGTTCTTCCACGTTGAATA 59.503 43.478 2.13 0.00 0.00 1.75
5619 9486 7.828223 AGAAGTACCTATTTCTAACGACTGAGA 59.172 37.037 0.00 0.00 31.57 3.27
5629 9496 8.431910 ACTTGACCAAGAAGTACCTATTTCTA 57.568 34.615 15.84 0.00 40.79 2.10
5630 9497 7.317722 ACTTGACCAAGAAGTACCTATTTCT 57.682 36.000 15.84 0.00 40.79 2.52
5631 9498 7.981102 AACTTGACCAAGAAGTACCTATTTC 57.019 36.000 15.84 0.00 40.79 2.17
5666 9537 9.147732 AGAACAATAACTTTTCTTTGAGGGATT 57.852 29.630 0.00 0.00 0.00 3.01
5698 9569 9.686683 AGTAGGCTTGATCACATATAACTTTTT 57.313 29.630 0.00 0.00 0.00 1.94
5699 9570 9.113838 CAGTAGGCTTGATCACATATAACTTTT 57.886 33.333 0.00 0.00 0.00 2.27
5700 9571 8.267894 ACAGTAGGCTTGATCACATATAACTTT 58.732 33.333 0.00 0.00 0.00 2.66
5701 9572 7.796054 ACAGTAGGCTTGATCACATATAACTT 58.204 34.615 0.00 0.00 0.00 2.66
5702 9573 7.366847 ACAGTAGGCTTGATCACATATAACT 57.633 36.000 0.00 0.00 0.00 2.24
5703 9574 7.710907 TCAACAGTAGGCTTGATCACATATAAC 59.289 37.037 0.00 0.00 0.00 1.89
5704 9575 7.791029 TCAACAGTAGGCTTGATCACATATAA 58.209 34.615 0.00 0.00 0.00 0.98
5705 9576 7.360113 TCAACAGTAGGCTTGATCACATATA 57.640 36.000 0.00 0.00 0.00 0.86
5706 9577 6.239217 TCAACAGTAGGCTTGATCACATAT 57.761 37.500 0.00 0.00 0.00 1.78
5707 9578 5.675684 TCAACAGTAGGCTTGATCACATA 57.324 39.130 0.00 0.00 0.00 2.29
5708 9579 4.558226 TCAACAGTAGGCTTGATCACAT 57.442 40.909 0.00 0.00 0.00 3.21
5709 9580 4.350368 TTCAACAGTAGGCTTGATCACA 57.650 40.909 0.00 0.00 0.00 3.58
5710 9581 4.377431 CGTTTCAACAGTAGGCTTGATCAC 60.377 45.833 0.00 0.00 0.00 3.06
5711 9582 3.745975 CGTTTCAACAGTAGGCTTGATCA 59.254 43.478 0.00 0.00 0.00 2.92
5712 9583 3.746492 ACGTTTCAACAGTAGGCTTGATC 59.254 43.478 0.00 0.00 0.00 2.92
5713 9584 3.498397 CACGTTTCAACAGTAGGCTTGAT 59.502 43.478 0.00 0.00 0.00 2.57
5714 9585 2.869801 CACGTTTCAACAGTAGGCTTGA 59.130 45.455 0.00 0.00 0.00 3.02
5715 9586 2.869801 TCACGTTTCAACAGTAGGCTTG 59.130 45.455 0.00 0.00 0.00 4.01
5716 9587 3.188159 TCACGTTTCAACAGTAGGCTT 57.812 42.857 0.00 0.00 0.00 4.35
5717 9588 2.902705 TCACGTTTCAACAGTAGGCT 57.097 45.000 0.00 0.00 0.00 4.58
5718 9589 5.109903 AGATATCACGTTTCAACAGTAGGC 58.890 41.667 5.32 0.00 0.00 3.93
5719 9590 7.117812 ACAAAGATATCACGTTTCAACAGTAGG 59.882 37.037 5.32 0.00 0.00 3.18
5720 9591 8.018677 ACAAAGATATCACGTTTCAACAGTAG 57.981 34.615 5.32 0.00 0.00 2.57
5721 9592 7.956420 ACAAAGATATCACGTTTCAACAGTA 57.044 32.000 5.32 0.00 0.00 2.74
5853 9724 1.843368 TTCCATCGGAGTCGGTTACT 58.157 50.000 0.00 0.00 42.80 2.24
6141 10043 0.632294 GGAGAGTGGTAGGGAGAGGT 59.368 60.000 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.