Multiple sequence alignment - TraesCS7D01G192600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G192600 chr7D 100.000 2687 0 0 1 2687 148166169 148163483 0.000000e+00 4963.0
1 TraesCS7D01G192600 chr7D 89.520 229 22 2 200 426 340233818 340233590 3.380000e-74 289.0
2 TraesCS7D01G192600 chr7D 91.388 209 8 7 1 200 566871617 566871824 7.330000e-71 278.0
3 TraesCS7D01G192600 chr7D 84.519 239 37 0 2445 2683 485983627 485983389 1.240000e-58 237.0
4 TraesCS7D01G192600 chr7A 94.635 1342 54 5 446 1781 149318141 149316812 0.000000e+00 2063.0
5 TraesCS7D01G192600 chr7A 87.313 268 34 0 2373 2640 198007881 198008148 9.340000e-80 307.0
6 TraesCS7D01G192600 chr7B 82.232 1165 168 26 548 1693 17354857 17356001 0.000000e+00 968.0
7 TraesCS7D01G192600 chr7B 81.834 1167 173 20 548 1693 17213233 17214381 0.000000e+00 944.0
8 TraesCS7D01G192600 chr7B 88.210 229 25 2 200 427 488352468 488352241 3.410000e-69 272.0
9 TraesCS7D01G192600 chr7B 89.302 215 20 3 224 437 83536435 83536223 1.590000e-67 267.0
10 TraesCS7D01G192600 chr7B 81.250 112 14 4 95 200 713567788 713567898 1.710000e-12 84.2
11 TraesCS7D01G192600 chr2D 88.344 815 54 18 1782 2556 533028361 533027548 0.000000e+00 941.0
12 TraesCS7D01G192600 chr2D 94.595 222 12 0 200 421 69609424 69609203 7.120000e-91 344.0
13 TraesCS7D01G192600 chr2D 86.631 187 25 0 1505 1691 72211988 72212174 9.750000e-50 207.0
14 TraesCS7D01G192600 chr2D 88.235 102 11 1 2 102 578445801 578445700 1.310000e-23 121.0
15 TraesCS7D01G192600 chr2D 84.946 93 12 1 110 200 578445741 578445649 2.850000e-15 93.5
16 TraesCS7D01G192600 chr5A 81.069 1141 186 19 548 1670 345239999 345241127 0.000000e+00 883.0
17 TraesCS7D01G192600 chr5B 90.705 312 29 0 2376 2687 297061592 297061903 1.490000e-112 416.0
18 TraesCS7D01G192600 chr6A 89.103 312 29 2 2376 2687 16974727 16974421 1.510000e-102 383.0
19 TraesCS7D01G192600 chr6A 95.000 60 2 1 2 60 259638655 259638714 2.850000e-15 93.5
20 TraesCS7D01G192600 chr6D 97.512 201 4 1 1 201 42932697 42932896 2.560000e-90 342.0
21 TraesCS7D01G192600 chr6D 88.500 200 7 3 1 200 445948291 445948474 7.480000e-56 228.0
22 TraesCS7D01G192600 chr3B 94.393 214 3 3 1 205 809178519 809178306 1.200000e-83 320.0
23 TraesCS7D01G192600 chr2B 84.936 312 47 0 2376 2687 131592376 131592687 1.550000e-82 316.0
24 TraesCS7D01G192600 chr2B 87.273 220 24 2 208 427 323013568 323013783 5.740000e-62 248.0
25 TraesCS7D01G192600 chr2B 80.357 112 14 4 100 204 737937499 737937389 7.980000e-11 78.7
26 TraesCS7D01G192600 chr4A 85.448 268 39 0 2373 2640 594169207 594169474 2.040000e-71 279.0
27 TraesCS7D01G192600 chr4B 88.362 232 26 1 200 430 581066552 581066321 7.330000e-71 278.0
28 TraesCS7D01G192600 chr4B 87.671 219 27 0 200 418 451830614 451830396 3.430000e-64 255.0
29 TraesCS7D01G192600 chr4B 81.982 111 13 4 95 200 624160465 624160573 1.330000e-13 87.9
30 TraesCS7D01G192600 chr1D 86.531 245 31 1 2445 2687 82334821 82335065 4.410000e-68 268.0
31 TraesCS7D01G192600 chr1D 88.235 102 7 4 2 100 359496581 359496482 1.690000e-22 117.0
32 TraesCS7D01G192600 chr1A 86.420 243 33 0 2445 2687 240943901 240944143 1.590000e-67 267.0
33 TraesCS7D01G192600 chr1A 84.314 102 11 4 2 100 72543100 72543199 7.920000e-16 95.3
34 TraesCS7D01G192600 chr4D 86.008 243 33 1 2445 2687 203632653 203632894 2.650000e-65 259.0
35 TraesCS7D01G192600 chr4D 91.304 92 7 1 1935 2025 42261876 42261785 1.010000e-24 124.0
36 TraesCS7D01G192600 chr4D 82.857 105 9 5 102 200 42192477 42192578 4.770000e-13 86.1
37 TraesCS7D01G192600 chr6B 86.638 232 31 0 194 425 506058441 506058672 9.540000e-65 257.0
38 TraesCS7D01G192600 chr3D 89.552 201 19 2 223 423 317206514 317206316 1.230000e-63 254.0
39 TraesCS7D01G192600 chr2A 88.060 67 8 0 141 207 672997885 672997819 2.220000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G192600 chr7D 148163483 148166169 2686 True 4963 4963 100.000 1 2687 1 chr7D.!!$R1 2686
1 TraesCS7D01G192600 chr7A 149316812 149318141 1329 True 2063 2063 94.635 446 1781 1 chr7A.!!$R1 1335
2 TraesCS7D01G192600 chr7B 17354857 17356001 1144 False 968 968 82.232 548 1693 1 chr7B.!!$F2 1145
3 TraesCS7D01G192600 chr7B 17213233 17214381 1148 False 944 944 81.834 548 1693 1 chr7B.!!$F1 1145
4 TraesCS7D01G192600 chr2D 533027548 533028361 813 True 941 941 88.344 1782 2556 1 chr2D.!!$R2 774
5 TraesCS7D01G192600 chr5A 345239999 345241127 1128 False 883 883 81.069 548 1670 1 chr5A.!!$F1 1122

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
320 321 0.034337 ACGCCTATTGACAACCGTGT 59.966 50.0 0.0 0.0 42.1 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1848 1881 0.179045 AGTGGATAAGACGCATGGGC 60.179 55.0 10.1 2.92 0.0 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 8.565896 TCATAGATAATGATTTGGTGTATGGC 57.434 34.615 0.00 0.00 39.77 4.40
27 28 8.162746 TCATAGATAATGATTTGGTGTATGGCA 58.837 33.333 0.00 0.00 39.77 4.92
28 29 6.639632 AGATAATGATTTGGTGTATGGCAC 57.360 37.500 0.00 0.00 46.97 5.01
29 30 6.367983 AGATAATGATTTGGTGTATGGCACT 58.632 36.000 0.00 0.00 46.86 4.40
30 31 6.835488 AGATAATGATTTGGTGTATGGCACTT 59.165 34.615 0.00 0.00 46.86 3.16
31 32 7.998383 AGATAATGATTTGGTGTATGGCACTTA 59.002 33.333 0.00 0.00 46.86 2.24
32 33 5.835113 ATGATTTGGTGTATGGCACTTAC 57.165 39.130 0.00 0.00 46.86 2.34
33 34 4.917385 TGATTTGGTGTATGGCACTTACT 58.083 39.130 0.00 0.00 46.86 2.24
34 35 4.699735 TGATTTGGTGTATGGCACTTACTG 59.300 41.667 0.00 0.00 46.86 2.74
35 36 4.359434 TTTGGTGTATGGCACTTACTGA 57.641 40.909 0.00 0.00 46.86 3.41
36 37 4.359434 TTGGTGTATGGCACTTACTGAA 57.641 40.909 0.00 0.00 46.86 3.02
37 38 3.670625 TGGTGTATGGCACTTACTGAAC 58.329 45.455 0.00 0.00 46.86 3.18
38 39 3.007635 GGTGTATGGCACTTACTGAACC 58.992 50.000 0.00 0.00 46.86 3.62
39 40 3.558321 GGTGTATGGCACTTACTGAACCA 60.558 47.826 0.00 0.00 46.86 3.67
40 41 4.069304 GTGTATGGCACTTACTGAACCAA 58.931 43.478 0.00 0.00 44.41 3.67
41 42 4.700213 GTGTATGGCACTTACTGAACCAAT 59.300 41.667 0.00 0.00 44.41 3.16
42 43 5.878116 GTGTATGGCACTTACTGAACCAATA 59.122 40.000 0.00 0.00 44.41 1.90
43 44 6.542370 GTGTATGGCACTTACTGAACCAATAT 59.458 38.462 0.00 0.00 44.41 1.28
44 45 6.765989 TGTATGGCACTTACTGAACCAATATC 59.234 38.462 0.00 0.00 33.30 1.63
45 46 5.172687 TGGCACTTACTGAACCAATATCA 57.827 39.130 0.00 0.00 0.00 2.15
46 47 5.754782 TGGCACTTACTGAACCAATATCAT 58.245 37.500 0.00 0.00 0.00 2.45
47 48 6.186957 TGGCACTTACTGAACCAATATCATT 58.813 36.000 0.00 0.00 0.00 2.57
48 49 6.095300 TGGCACTTACTGAACCAATATCATTG 59.905 38.462 0.00 0.00 0.00 2.82
49 50 6.095440 GGCACTTACTGAACCAATATCATTGT 59.905 38.462 0.00 0.00 0.00 2.71
50 51 7.362920 GGCACTTACTGAACCAATATCATTGTT 60.363 37.037 0.00 0.00 0.00 2.83
51 52 8.673711 GCACTTACTGAACCAATATCATTGTTA 58.326 33.333 0.00 0.00 0.00 2.41
86 87 7.439157 TTGCAATGCTCATATGACTATTACC 57.561 36.000 6.82 1.97 0.00 2.85
87 88 5.639082 TGCAATGCTCATATGACTATTACCG 59.361 40.000 6.82 0.00 0.00 4.02
88 89 5.063944 GCAATGCTCATATGACTATTACCGG 59.936 44.000 0.00 0.00 0.00 5.28
89 90 6.398095 CAATGCTCATATGACTATTACCGGA 58.602 40.000 9.46 0.00 0.00 5.14
90 91 6.798427 ATGCTCATATGACTATTACCGGAT 57.202 37.500 9.46 0.00 0.00 4.18
91 92 6.605471 TGCTCATATGACTATTACCGGATT 57.395 37.500 9.46 0.00 0.00 3.01
92 93 6.398095 TGCTCATATGACTATTACCGGATTG 58.602 40.000 9.46 0.00 0.00 2.67
93 94 5.812642 GCTCATATGACTATTACCGGATTGG 59.187 44.000 9.46 0.00 46.41 3.16
94 95 6.351033 GCTCATATGACTATTACCGGATTGGA 60.351 42.308 9.46 0.00 42.00 3.53
95 96 7.633772 GCTCATATGACTATTACCGGATTGGAT 60.634 40.741 9.46 0.00 42.00 3.41
96 97 8.832458 TCATATGACTATTACCGGATTGGATA 57.168 34.615 9.46 0.00 42.00 2.59
97 98 9.434275 TCATATGACTATTACCGGATTGGATAT 57.566 33.333 9.46 0.00 42.00 1.63
98 99 9.481340 CATATGACTATTACCGGATTGGATATG 57.519 37.037 9.46 6.49 42.00 1.78
99 100 7.733773 ATGACTATTACCGGATTGGATATGA 57.266 36.000 9.46 0.00 42.00 2.15
100 101 7.733773 TGACTATTACCGGATTGGATATGAT 57.266 36.000 9.46 0.00 42.00 2.45
101 102 8.146053 TGACTATTACCGGATTGGATATGATT 57.854 34.615 9.46 0.00 42.00 2.57
102 103 8.602424 TGACTATTACCGGATTGGATATGATTT 58.398 33.333 9.46 0.00 42.00 2.17
103 104 9.449719 GACTATTACCGGATTGGATATGATTTT 57.550 33.333 9.46 0.00 42.00 1.82
104 105 9.807921 ACTATTACCGGATTGGATATGATTTTT 57.192 29.630 9.46 0.00 42.00 1.94
128 129 8.477984 TTTTTAATTTGCAATGCTCCTATGAC 57.522 30.769 6.82 0.00 0.00 3.06
129 130 7.408756 TTTAATTTGCAATGCTCCTATGACT 57.591 32.000 6.82 0.00 0.00 3.41
130 131 5.927281 AATTTGCAATGCTCCTATGACTT 57.073 34.783 6.82 0.00 0.00 3.01
131 132 8.518430 TTAATTTGCAATGCTCCTATGACTTA 57.482 30.769 6.82 0.00 0.00 2.24
132 133 5.818136 TTTGCAATGCTCCTATGACTTAC 57.182 39.130 6.82 0.00 0.00 2.34
133 134 4.760530 TGCAATGCTCCTATGACTTACT 57.239 40.909 6.82 0.00 0.00 2.24
134 135 4.445453 TGCAATGCTCCTATGACTTACTG 58.555 43.478 6.82 0.00 0.00 2.74
135 136 3.812053 GCAATGCTCCTATGACTTACTGG 59.188 47.826 0.00 0.00 0.00 4.00
136 137 4.443457 GCAATGCTCCTATGACTTACTGGA 60.443 45.833 0.00 0.00 0.00 3.86
137 138 5.744300 GCAATGCTCCTATGACTTACTGGAT 60.744 44.000 0.00 0.00 0.00 3.41
138 139 5.736951 ATGCTCCTATGACTTACTGGATC 57.263 43.478 0.00 0.00 0.00 3.36
139 140 4.546674 TGCTCCTATGACTTACTGGATCA 58.453 43.478 0.00 0.00 0.00 2.92
140 141 4.586421 TGCTCCTATGACTTACTGGATCAG 59.414 45.833 0.00 0.00 37.52 2.90
141 142 4.830046 GCTCCTATGACTTACTGGATCAGA 59.170 45.833 1.59 0.00 35.18 3.27
142 143 5.480073 GCTCCTATGACTTACTGGATCAGAT 59.520 44.000 1.59 0.00 35.18 2.90
143 144 6.661377 GCTCCTATGACTTACTGGATCAGATA 59.339 42.308 1.59 0.00 35.18 1.98
144 145 7.341769 GCTCCTATGACTTACTGGATCAGATAT 59.658 40.741 1.59 0.00 35.18 1.63
145 146 8.586879 TCCTATGACTTACTGGATCAGATATG 57.413 38.462 1.59 0.00 35.18 1.78
146 147 8.394040 TCCTATGACTTACTGGATCAGATATGA 58.606 37.037 1.59 0.00 35.18 2.15
147 148 9.199645 CCTATGACTTACTGGATCAGATATGAT 57.800 37.037 1.59 1.59 35.18 2.45
150 151 8.255111 TGACTTACTGGATCAGATATGATTGT 57.745 34.615 3.97 6.97 35.18 2.71
151 152 8.708378 TGACTTACTGGATCAGATATGATTGTT 58.292 33.333 3.97 0.00 35.18 2.83
152 153 8.899427 ACTTACTGGATCAGATATGATTGTTG 57.101 34.615 3.97 0.00 35.18 3.33
153 154 7.443575 ACTTACTGGATCAGATATGATTGTTGC 59.556 37.037 3.97 0.00 35.18 4.17
154 155 5.068636 ACTGGATCAGATATGATTGTTGCC 58.931 41.667 3.97 1.34 35.18 4.52
155 156 4.067192 TGGATCAGATATGATTGTTGCCG 58.933 43.478 3.97 0.00 0.00 5.69
156 157 3.438087 GGATCAGATATGATTGTTGCCGG 59.562 47.826 3.97 0.00 0.00 6.13
157 158 2.221169 TCAGATATGATTGTTGCCGGC 58.779 47.619 22.73 22.73 0.00 6.13
158 159 1.948834 CAGATATGATTGTTGCCGGCA 59.051 47.619 29.03 29.03 0.00 5.69
159 160 2.358582 CAGATATGATTGTTGCCGGCAA 59.641 45.455 37.30 37.30 0.00 4.52
167 168 3.736100 TTGCCGGCAACATCGCTG 61.736 61.111 37.30 0.00 38.05 5.18
174 175 3.803082 CAACATCGCTGCCGGGTG 61.803 66.667 2.18 0.00 34.56 4.61
193 194 2.046314 GGCAAGCCGCACTTCCTA 60.046 61.111 0.00 0.00 45.17 2.94
194 195 2.399356 GGCAAGCCGCACTTCCTAC 61.399 63.158 0.00 0.00 45.17 3.18
195 196 2.399356 GCAAGCCGCACTTCCTACC 61.399 63.158 0.00 0.00 41.79 3.18
196 197 1.296715 CAAGCCGCACTTCCTACCT 59.703 57.895 0.00 0.00 36.04 3.08
197 198 0.535335 CAAGCCGCACTTCCTACCTA 59.465 55.000 0.00 0.00 36.04 3.08
198 199 0.824759 AAGCCGCACTTCCTACCTAG 59.175 55.000 0.00 0.00 30.77 3.02
199 200 0.324460 AGCCGCACTTCCTACCTAGT 60.324 55.000 0.00 0.00 0.00 2.57
200 201 0.535797 GCCGCACTTCCTACCTAGTT 59.464 55.000 0.00 0.00 0.00 2.24
201 202 1.753073 GCCGCACTTCCTACCTAGTTA 59.247 52.381 0.00 0.00 0.00 2.24
202 203 2.364647 GCCGCACTTCCTACCTAGTTAT 59.635 50.000 0.00 0.00 0.00 1.89
203 204 3.181468 GCCGCACTTCCTACCTAGTTATT 60.181 47.826 0.00 0.00 0.00 1.40
204 205 4.369182 CCGCACTTCCTACCTAGTTATTG 58.631 47.826 0.00 0.00 0.00 1.90
205 206 4.098960 CCGCACTTCCTACCTAGTTATTGA 59.901 45.833 0.00 0.00 0.00 2.57
206 207 5.041940 CGCACTTCCTACCTAGTTATTGAC 58.958 45.833 0.00 0.00 0.00 3.18
207 208 5.041940 GCACTTCCTACCTAGTTATTGACG 58.958 45.833 0.00 0.00 0.00 4.35
208 209 5.163581 GCACTTCCTACCTAGTTATTGACGA 60.164 44.000 0.00 0.00 0.00 4.20
209 210 6.496571 CACTTCCTACCTAGTTATTGACGAG 58.503 44.000 0.00 0.00 0.00 4.18
214 215 3.753294 CCTAGTTATTGACGAGGCCAT 57.247 47.619 5.01 0.00 43.00 4.40
215 216 3.654414 CCTAGTTATTGACGAGGCCATC 58.346 50.000 5.01 0.00 43.00 3.51
216 217 2.622064 AGTTATTGACGAGGCCATCC 57.378 50.000 5.01 0.00 0.00 3.51
217 218 5.778190 CCTAGTTATTGACGAGGCCATCCT 61.778 50.000 5.01 0.00 43.00 3.24
218 219 2.158900 AGTTATTGACGAGGCCATCCTG 60.159 50.000 5.01 0.00 44.46 3.86
219 220 1.496060 TATTGACGAGGCCATCCTGT 58.504 50.000 5.01 0.00 44.46 4.00
220 221 1.496060 ATTGACGAGGCCATCCTGTA 58.504 50.000 5.01 0.00 44.46 2.74
221 222 1.496060 TTGACGAGGCCATCCTGTAT 58.504 50.000 5.01 0.00 44.46 2.29
222 223 1.040646 TGACGAGGCCATCCTGTATC 58.959 55.000 5.01 0.00 44.46 2.24
223 224 0.039074 GACGAGGCCATCCTGTATCG 60.039 60.000 5.01 5.21 44.46 2.92
224 225 0.755698 ACGAGGCCATCCTGTATCGT 60.756 55.000 5.01 5.98 44.46 3.73
225 226 1.244816 CGAGGCCATCCTGTATCGTA 58.755 55.000 5.01 0.00 44.46 3.43
226 227 1.819288 CGAGGCCATCCTGTATCGTAT 59.181 52.381 5.01 0.00 44.46 3.06
227 228 2.231478 CGAGGCCATCCTGTATCGTATT 59.769 50.000 5.01 0.00 44.46 1.89
228 229 3.306088 CGAGGCCATCCTGTATCGTATTT 60.306 47.826 5.01 0.00 44.46 1.40
229 230 3.997021 GAGGCCATCCTGTATCGTATTTG 59.003 47.826 5.01 0.00 44.46 2.32
230 231 3.391296 AGGCCATCCTGTATCGTATTTGT 59.609 43.478 5.01 0.00 42.34 2.83
231 232 4.134563 GGCCATCCTGTATCGTATTTGTT 58.865 43.478 0.00 0.00 0.00 2.83
232 233 4.024048 GGCCATCCTGTATCGTATTTGTTG 60.024 45.833 0.00 0.00 0.00 3.33
233 234 4.814234 GCCATCCTGTATCGTATTTGTTGA 59.186 41.667 0.00 0.00 0.00 3.18
234 235 5.277345 GCCATCCTGTATCGTATTTGTTGAC 60.277 44.000 0.00 0.00 0.00 3.18
235 236 5.236478 CCATCCTGTATCGTATTTGTTGACC 59.764 44.000 0.00 0.00 0.00 4.02
236 237 5.408880 TCCTGTATCGTATTTGTTGACCA 57.591 39.130 0.00 0.00 0.00 4.02
237 238 5.172934 TCCTGTATCGTATTTGTTGACCAC 58.827 41.667 0.00 0.00 0.00 4.16
238 239 4.331717 CCTGTATCGTATTTGTTGACCACC 59.668 45.833 0.00 0.00 0.00 4.61
239 240 4.895961 TGTATCGTATTTGTTGACCACCA 58.104 39.130 0.00 0.00 0.00 4.17
240 241 5.492895 TGTATCGTATTTGTTGACCACCAT 58.507 37.500 0.00 0.00 0.00 3.55
241 242 5.941058 TGTATCGTATTTGTTGACCACCATT 59.059 36.000 0.00 0.00 0.00 3.16
242 243 7.104290 TGTATCGTATTTGTTGACCACCATTA 58.896 34.615 0.00 0.00 0.00 1.90
243 244 7.771361 TGTATCGTATTTGTTGACCACCATTAT 59.229 33.333 0.00 0.00 0.00 1.28
244 245 7.639113 ATCGTATTTGTTGACCACCATTATT 57.361 32.000 0.00 0.00 0.00 1.40
245 246 6.847400 TCGTATTTGTTGACCACCATTATTG 58.153 36.000 0.00 0.00 0.00 1.90
246 247 6.431543 TCGTATTTGTTGACCACCATTATTGT 59.568 34.615 0.00 0.00 0.00 2.71
247 248 7.606839 TCGTATTTGTTGACCACCATTATTGTA 59.393 33.333 0.00 0.00 0.00 2.41
248 249 8.237949 CGTATTTGTTGACCACCATTATTGTAA 58.762 33.333 0.00 0.00 0.00 2.41
249 250 9.915629 GTATTTGTTGACCACCATTATTGTAAA 57.084 29.630 0.00 0.00 0.00 2.01
251 252 7.589958 TTGTTGACCACCATTATTGTAAAGT 57.410 32.000 0.00 0.00 0.00 2.66
252 253 7.209471 TGTTGACCACCATTATTGTAAAGTC 57.791 36.000 0.00 0.00 0.00 3.01
253 254 6.773200 TGTTGACCACCATTATTGTAAAGTCA 59.227 34.615 0.00 0.00 0.00 3.41
254 255 7.450014 TGTTGACCACCATTATTGTAAAGTCAT 59.550 33.333 0.00 0.00 32.30 3.06
255 256 8.952278 GTTGACCACCATTATTGTAAAGTCATA 58.048 33.333 0.00 0.00 32.30 2.15
256 257 9.693739 TTGACCACCATTATTGTAAAGTCATAT 57.306 29.630 0.00 0.00 32.30 1.78
257 258 9.119418 TGACCACCATTATTGTAAAGTCATATG 57.881 33.333 0.00 0.00 0.00 1.78
258 259 9.337396 GACCACCATTATTGTAAAGTCATATGA 57.663 33.333 0.00 0.00 0.00 2.15
259 260 9.120538 ACCACCATTATTGTAAAGTCATATGAC 57.879 33.333 25.47 25.47 45.08 3.06
274 275 7.725610 GTCATATGACACTATTGCAACAAAC 57.274 36.000 27.33 0.00 44.18 2.93
275 276 7.530010 GTCATATGACACTATTGCAACAAACT 58.470 34.615 27.33 0.00 44.18 2.66
276 277 8.023128 GTCATATGACACTATTGCAACAAACTT 58.977 33.333 27.33 0.00 44.18 2.66
277 278 8.236586 TCATATGACACTATTGCAACAAACTTC 58.763 33.333 0.00 0.00 0.00 3.01
278 279 6.639632 ATGACACTATTGCAACAAACTTCT 57.360 33.333 0.00 0.00 0.00 2.85
279 280 6.449635 TGACACTATTGCAACAAACTTCTT 57.550 33.333 0.00 0.00 0.00 2.52
280 281 6.494842 TGACACTATTGCAACAAACTTCTTC 58.505 36.000 0.00 0.00 0.00 2.87
281 282 6.318648 TGACACTATTGCAACAAACTTCTTCT 59.681 34.615 0.00 0.00 0.00 2.85
282 283 7.100458 ACACTATTGCAACAAACTTCTTCTT 57.900 32.000 0.00 0.00 0.00 2.52
283 284 7.196331 ACACTATTGCAACAAACTTCTTCTTC 58.804 34.615 0.00 0.00 0.00 2.87
284 285 6.358030 CACTATTGCAACAAACTTCTTCTTCG 59.642 38.462 0.00 0.00 0.00 3.79
285 286 3.691049 TGCAACAAACTTCTTCTTCGG 57.309 42.857 0.00 0.00 0.00 4.30
286 287 3.275143 TGCAACAAACTTCTTCTTCGGA 58.725 40.909 0.00 0.00 0.00 4.55
287 288 3.312421 TGCAACAAACTTCTTCTTCGGAG 59.688 43.478 0.00 0.00 0.00 4.63
288 289 3.312697 GCAACAAACTTCTTCTTCGGAGT 59.687 43.478 0.00 0.00 0.00 3.85
289 290 4.552961 GCAACAAACTTCTTCTTCGGAGTC 60.553 45.833 0.00 0.00 0.00 3.36
290 291 3.381949 ACAAACTTCTTCTTCGGAGTCG 58.618 45.455 0.00 0.00 37.82 4.18
291 292 3.067742 ACAAACTTCTTCTTCGGAGTCGA 59.932 43.478 0.00 0.00 44.44 4.20
292 293 2.993449 ACTTCTTCTTCGGAGTCGAC 57.007 50.000 7.70 7.70 45.92 4.20
293 294 2.506444 ACTTCTTCTTCGGAGTCGACT 58.494 47.619 20.18 20.18 45.92 4.18
294 295 2.226912 ACTTCTTCTTCGGAGTCGACTG 59.773 50.000 25.58 9.95 45.92 3.51
295 296 0.522180 TCTTCTTCGGAGTCGACTGC 59.478 55.000 25.58 25.55 45.92 4.40
296 297 0.241213 CTTCTTCGGAGTCGACTGCA 59.759 55.000 32.29 18.80 45.92 4.41
297 298 0.241213 TTCTTCGGAGTCGACTGCAG 59.759 55.000 32.29 23.73 45.92 4.41
298 299 1.803519 CTTCGGAGTCGACTGCAGC 60.804 63.158 32.29 14.79 45.92 5.25
299 300 2.206515 CTTCGGAGTCGACTGCAGCT 62.207 60.000 32.29 5.09 45.92 4.24
300 301 1.806461 TTCGGAGTCGACTGCAGCTT 61.806 55.000 32.29 4.30 45.92 3.74
301 302 0.958876 TCGGAGTCGACTGCAGCTTA 60.959 55.000 32.29 12.29 40.88 3.09
302 303 0.798771 CGGAGTCGACTGCAGCTTAC 60.799 60.000 32.29 12.32 39.00 2.34
303 304 0.798771 GGAGTCGACTGCAGCTTACG 60.799 60.000 29.52 14.48 34.20 3.18
304 305 1.406970 GAGTCGACTGCAGCTTACGC 61.407 60.000 25.58 7.25 0.00 4.42
305 306 2.126071 TCGACTGCAGCTTACGCC 60.126 61.111 15.27 0.00 36.60 5.68
306 307 2.125912 CGACTGCAGCTTACGCCT 60.126 61.111 15.27 0.00 36.60 5.52
307 308 1.138883 CGACTGCAGCTTACGCCTA 59.861 57.895 15.27 0.00 36.60 3.93
308 309 0.249073 CGACTGCAGCTTACGCCTAT 60.249 55.000 15.27 0.00 36.60 2.57
309 310 1.802880 CGACTGCAGCTTACGCCTATT 60.803 52.381 15.27 0.00 36.60 1.73
310 311 1.594862 GACTGCAGCTTACGCCTATTG 59.405 52.381 15.27 0.00 36.60 1.90
311 312 1.207089 ACTGCAGCTTACGCCTATTGA 59.793 47.619 15.27 0.00 36.60 2.57
312 313 1.594862 CTGCAGCTTACGCCTATTGAC 59.405 52.381 0.00 0.00 36.60 3.18
313 314 1.066502 TGCAGCTTACGCCTATTGACA 60.067 47.619 0.00 0.00 36.60 3.58
314 315 2.006888 GCAGCTTACGCCTATTGACAA 58.993 47.619 0.00 0.00 36.60 3.18
315 316 2.223044 GCAGCTTACGCCTATTGACAAC 60.223 50.000 0.00 0.00 36.60 3.32
316 317 2.351726 CAGCTTACGCCTATTGACAACC 59.648 50.000 0.00 0.00 36.60 3.77
317 318 1.326548 GCTTACGCCTATTGACAACCG 59.673 52.381 0.00 0.00 0.00 4.44
318 319 2.613691 CTTACGCCTATTGACAACCGT 58.386 47.619 9.11 9.11 0.00 4.83
319 320 1.999048 TACGCCTATTGACAACCGTG 58.001 50.000 12.43 3.66 0.00 4.94
320 321 0.034337 ACGCCTATTGACAACCGTGT 59.966 50.000 0.00 0.00 42.10 4.49
327 328 3.852316 GACAACCGTGTCGTAGGC 58.148 61.111 0.00 0.00 44.58 3.93
328 329 1.007038 GACAACCGTGTCGTAGGCA 60.007 57.895 0.00 0.00 44.58 4.75
358 359 8.686397 TGCATATAATTTAGTTGCAACAACAG 57.314 30.769 30.11 10.06 40.11 3.16
359 360 8.518702 TGCATATAATTTAGTTGCAACAACAGA 58.481 29.630 30.11 11.30 40.11 3.41
360 361 9.352784 GCATATAATTTAGTTGCAACAACAGAA 57.647 29.630 30.11 16.51 33.58 3.02
364 365 9.816354 ATAATTTAGTTGCAACAACAGAAGTTT 57.184 25.926 30.11 8.95 35.28 2.66
365 366 6.942886 TTTAGTTGCAACAACAGAAGTTTG 57.057 33.333 30.11 0.00 35.28 2.93
366 367 3.848726 AGTTGCAACAACAGAAGTTTGG 58.151 40.909 30.11 0.00 35.28 3.28
367 368 3.509575 AGTTGCAACAACAGAAGTTTGGA 59.490 39.130 30.11 0.00 35.28 3.53
368 369 4.160252 AGTTGCAACAACAGAAGTTTGGAT 59.840 37.500 30.11 1.64 35.28 3.41
369 370 4.044336 TGCAACAACAGAAGTTTGGATG 57.956 40.909 0.00 0.00 35.28 3.51
370 371 3.698539 TGCAACAACAGAAGTTTGGATGA 59.301 39.130 0.00 0.00 35.28 2.92
371 372 4.341806 TGCAACAACAGAAGTTTGGATGAT 59.658 37.500 0.00 0.00 35.28 2.45
372 373 5.534278 TGCAACAACAGAAGTTTGGATGATA 59.466 36.000 0.00 0.00 35.28 2.15
373 374 6.209192 TGCAACAACAGAAGTTTGGATGATAT 59.791 34.615 0.00 0.00 35.28 1.63
374 375 6.529125 GCAACAACAGAAGTTTGGATGATATG 59.471 38.462 0.00 0.00 35.28 1.78
375 376 7.596494 CAACAACAGAAGTTTGGATGATATGT 58.404 34.615 0.00 0.00 35.28 2.29
376 377 7.383102 ACAACAGAAGTTTGGATGATATGTC 57.617 36.000 0.00 0.00 35.28 3.06
377 378 6.942005 ACAACAGAAGTTTGGATGATATGTCA 59.058 34.615 0.00 0.00 35.28 3.58
378 379 7.448161 ACAACAGAAGTTTGGATGATATGTCAA 59.552 33.333 0.00 0.00 35.12 3.18
379 380 8.464404 CAACAGAAGTTTGGATGATATGTCAAT 58.536 33.333 0.00 0.00 35.12 2.57
380 381 8.585471 ACAGAAGTTTGGATGATATGTCAATT 57.415 30.769 0.00 0.00 38.01 2.32
381 382 9.028284 ACAGAAGTTTGGATGATATGTCAATTT 57.972 29.630 0.00 0.00 38.01 1.82
382 383 9.865321 CAGAAGTTTGGATGATATGTCAATTTT 57.135 29.630 0.00 0.00 38.01 1.82
407 408 4.341502 GTTGCAACGCACCGGCAT 62.342 61.111 14.90 0.00 38.71 4.40
408 409 2.669910 TTGCAACGCACCGGCATA 60.670 55.556 0.00 0.00 38.71 3.14
409 410 2.972144 TTGCAACGCACCGGCATAC 61.972 57.895 0.00 0.00 38.71 2.39
410 411 4.514569 GCAACGCACCGGCATACG 62.515 66.667 0.00 2.33 41.24 3.06
411 412 3.115892 CAACGCACCGGCATACGT 61.116 61.111 0.00 3.11 42.24 3.57
412 413 3.115892 AACGCACCGGCATACGTG 61.116 61.111 0.00 0.00 42.24 4.49
482 483 1.997669 GGTTGTCCGTCTCATGTCTC 58.002 55.000 0.00 0.00 0.00 3.36
483 484 1.272490 GGTTGTCCGTCTCATGTCTCA 59.728 52.381 0.00 0.00 0.00 3.27
484 485 2.093973 GGTTGTCCGTCTCATGTCTCAT 60.094 50.000 0.00 0.00 0.00 2.90
498 499 8.044908 TCTCATGTCTCATCTCATCAATCAAAA 58.955 33.333 0.00 0.00 0.00 2.44
502 503 6.822170 TGTCTCATCTCATCAATCAAAAGAGG 59.178 38.462 0.00 0.00 0.00 3.69
503 504 6.260493 GTCTCATCTCATCAATCAAAAGAGGG 59.740 42.308 0.00 0.00 0.00 4.30
504 505 6.157471 TCTCATCTCATCAATCAAAAGAGGGA 59.843 38.462 0.00 0.00 0.00 4.20
505 506 6.354938 TCATCTCATCAATCAAAAGAGGGAG 58.645 40.000 0.00 0.00 0.00 4.30
546 547 1.789078 GACGATGCATCACATGGCCC 61.789 60.000 25.70 2.33 39.84 5.80
726 733 1.521681 CCGCCACCGAGATCCTTTC 60.522 63.158 0.00 0.00 36.29 2.62
792 799 1.522092 CAGCAGCGACCCAAGGATA 59.478 57.895 0.00 0.00 0.00 2.59
921 928 3.049080 GCCCCTCTCCAAAGCCGAT 62.049 63.158 0.00 0.00 0.00 4.18
935 942 1.978473 CCGATATCCCTCTGCCCAG 59.022 63.158 0.00 0.00 0.00 4.45
1173 1186 1.839994 ACCATCAACATGTCCCTCGAT 59.160 47.619 0.00 0.00 0.00 3.59
1360 1385 1.001974 TGATACTTGCGGAAGTGCACT 59.998 47.619 29.82 15.25 46.25 4.40
1479 1512 1.349026 CTCTCTGCAAAGGAGTTCCCA 59.651 52.381 1.80 0.00 37.41 4.37
1534 1567 5.001874 AGCATGATACATACAAGCATGAGG 58.998 41.667 5.57 0.00 38.82 3.86
1535 1568 4.379186 GCATGATACATACAAGCATGAGGC 60.379 45.833 5.57 0.00 38.82 4.70
1580 1613 3.294102 GGTCAAACGATTTGGAACGAAC 58.706 45.455 9.54 1.97 40.98 3.95
1601 1634 1.601759 CCCACCCACAAGAGCACAG 60.602 63.158 0.00 0.00 0.00 3.66
1698 1731 2.576191 GGCCCTATGAGGTATTGGCATA 59.424 50.000 0.00 0.00 37.27 3.14
1721 1754 3.681593 TTTGGTCATTTGGAATGCCAG 57.318 42.857 0.00 0.00 46.91 4.85
1733 1766 6.455360 TTGGAATGCCAGATAAATCAACTC 57.545 37.500 0.00 0.00 46.91 3.01
1818 1851 2.275202 CGTGCACGATTTCGCGTC 60.275 61.111 34.93 0.00 43.59 5.19
1823 1856 1.269810 CACGATTTCGCGTCATCGG 59.730 57.895 31.30 21.81 45.40 4.18
1848 1881 1.862201 TCACGCTACAGACAAAAACGG 59.138 47.619 0.00 0.00 0.00 4.44
1852 1885 1.600023 CTACAGACAAAAACGGCCCA 58.400 50.000 0.00 0.00 0.00 5.36
1854 1887 0.673437 ACAGACAAAAACGGCCCATG 59.327 50.000 0.00 0.00 0.00 3.66
1857 1890 2.338257 CAAAAACGGCCCATGCGT 59.662 55.556 0.00 0.00 38.85 5.24
1868 1901 1.747206 GCCCATGCGTCTTATCCACTT 60.747 52.381 0.00 0.00 0.00 3.16
1881 1914 1.204146 TCCACTTAGCCCACCATCTC 58.796 55.000 0.00 0.00 0.00 2.75
1928 1961 1.141881 CCGCGCCTACTTCTGATGT 59.858 57.895 0.00 1.65 0.00 3.06
1957 1990 2.427245 CCGCTCCTCCACCTCGAAT 61.427 63.158 0.00 0.00 0.00 3.34
1962 1995 0.034380 TCCTCCACCTCGAATCGACT 60.034 55.000 0.00 0.00 0.00 4.18
1963 1996 1.211212 TCCTCCACCTCGAATCGACTA 59.789 52.381 0.00 0.00 0.00 2.59
1964 1997 1.334243 CCTCCACCTCGAATCGACTAC 59.666 57.143 0.00 0.00 0.00 2.73
1969 2014 1.008767 CTCGAATCGACTACGCCCC 60.009 63.158 0.00 0.00 39.58 5.80
2136 2181 4.742649 TGTCTCGCTCCTCCCGCT 62.743 66.667 0.00 0.00 0.00 5.52
2272 2338 2.359354 CAAACCGACCGGATGCCA 60.359 61.111 16.07 0.00 38.96 4.92
2277 2343 2.415843 CGACCGGATGCCACGTAT 59.584 61.111 9.46 0.00 0.00 3.06
2290 2356 2.482864 CCACGTATGTGCATGCATCTA 58.517 47.619 25.64 15.28 45.04 1.98
2360 2433 4.163839 TCCTAGCTAGTTCGTCTACCTCTT 59.836 45.833 19.31 0.00 0.00 2.85
2374 2447 8.662141 TCGTCTACCTCTTTTGTTATTAATTGC 58.338 33.333 0.00 0.00 0.00 3.56
2380 2453 7.451566 ACCTCTTTTGTTATTAATTGCAGGAGT 59.548 33.333 0.00 0.00 0.00 3.85
2414 2487 5.332707 TGTCGATATAATAGCTCACGCATC 58.667 41.667 0.00 0.00 39.10 3.91
2418 2491 6.473455 TCGATATAATAGCTCACGCATCATTG 59.527 38.462 0.00 0.00 39.10 2.82
2434 2507 3.138304 TCATTGTGGTAGTTGCACACTC 58.862 45.455 6.04 0.23 36.88 3.51
2468 2541 5.736813 AGTTGGCATCCGTAGTAATTGTAA 58.263 37.500 0.00 0.00 0.00 2.41
2480 2553 8.391859 CCGTAGTAATTGTAATTGCACACATAA 58.608 33.333 0.00 0.00 34.05 1.90
2498 2571 9.494271 CACACATAATACTTATCAGTTGGCTAT 57.506 33.333 0.00 0.00 34.06 2.97
2556 2629 5.046529 AGATGATTAGACAATGTCTCGCAC 58.953 41.667 20.25 10.34 42.40 5.34
2557 2630 4.456280 TGATTAGACAATGTCTCGCACT 57.544 40.909 20.25 0.00 42.40 4.40
2558 2631 4.820897 TGATTAGACAATGTCTCGCACTT 58.179 39.130 20.25 0.00 42.40 3.16
2559 2632 4.627035 TGATTAGACAATGTCTCGCACTTG 59.373 41.667 20.25 0.00 42.40 3.16
2560 2633 1.151668 AGACAATGTCTCGCACTTGC 58.848 50.000 10.56 0.00 38.71 4.01
2561 2634 0.867746 GACAATGTCTCGCACTTGCA 59.132 50.000 6.07 0.00 42.21 4.08
2562 2635 1.466167 GACAATGTCTCGCACTTGCAT 59.534 47.619 6.07 0.00 42.21 3.96
2563 2636 1.881973 ACAATGTCTCGCACTTGCATT 59.118 42.857 1.48 0.00 42.21 3.56
2564 2637 2.095567 ACAATGTCTCGCACTTGCATTC 60.096 45.455 1.48 0.00 42.21 2.67
2565 2638 1.089920 ATGTCTCGCACTTGCATTCC 58.910 50.000 1.48 0.00 42.21 3.01
2566 2639 0.035317 TGTCTCGCACTTGCATTCCT 59.965 50.000 1.48 0.00 42.21 3.36
2567 2640 1.160137 GTCTCGCACTTGCATTCCTT 58.840 50.000 1.48 0.00 42.21 3.36
2568 2641 2.289382 TGTCTCGCACTTGCATTCCTTA 60.289 45.455 1.48 0.00 42.21 2.69
2569 2642 2.094417 GTCTCGCACTTGCATTCCTTAC 59.906 50.000 1.48 0.00 42.21 2.34
2570 2643 2.028112 TCTCGCACTTGCATTCCTTACT 60.028 45.455 1.48 0.00 42.21 2.24
2571 2644 2.346803 TCGCACTTGCATTCCTTACTC 58.653 47.619 1.48 0.00 42.21 2.59
2572 2645 2.076100 CGCACTTGCATTCCTTACTCA 58.924 47.619 1.48 0.00 42.21 3.41
2573 2646 2.483877 CGCACTTGCATTCCTTACTCAA 59.516 45.455 1.48 0.00 42.21 3.02
2574 2647 3.425359 CGCACTTGCATTCCTTACTCAAG 60.425 47.826 1.48 0.00 42.21 3.02
2575 2648 3.503748 GCACTTGCATTCCTTACTCAAGT 59.496 43.478 0.00 0.00 45.53 3.16
2576 2649 4.695455 GCACTTGCATTCCTTACTCAAGTA 59.305 41.667 5.73 0.00 43.59 2.24
2577 2650 5.355350 GCACTTGCATTCCTTACTCAAGTAT 59.645 40.000 5.73 0.00 43.59 2.12
2578 2651 6.538742 GCACTTGCATTCCTTACTCAAGTATA 59.461 38.462 5.73 0.00 43.59 1.47
2579 2652 7.254590 GCACTTGCATTCCTTACTCAAGTATAG 60.255 40.741 5.73 0.00 43.59 1.31
2580 2653 6.763610 ACTTGCATTCCTTACTCAAGTATAGC 59.236 38.462 4.36 0.00 43.60 2.97
2581 2654 6.485830 TGCATTCCTTACTCAAGTATAGCT 57.514 37.500 0.00 0.00 0.00 3.32
2582 2655 7.597288 TGCATTCCTTACTCAAGTATAGCTA 57.403 36.000 0.00 0.00 0.00 3.32
2583 2656 7.661968 TGCATTCCTTACTCAAGTATAGCTAG 58.338 38.462 0.00 0.00 0.00 3.42
2584 2657 7.505923 TGCATTCCTTACTCAAGTATAGCTAGA 59.494 37.037 0.00 0.00 0.00 2.43
2585 2658 7.810759 GCATTCCTTACTCAAGTATAGCTAGAC 59.189 40.741 10.59 10.59 0.00 2.59
2586 2659 7.493743 TTCCTTACTCAAGTATAGCTAGACG 57.506 40.000 12.62 1.59 0.00 4.18
2587 2660 5.996513 TCCTTACTCAAGTATAGCTAGACGG 59.003 44.000 12.62 9.43 0.00 4.79
2588 2661 5.996513 CCTTACTCAAGTATAGCTAGACGGA 59.003 44.000 12.62 12.85 0.00 4.69
2589 2662 6.073112 CCTTACTCAAGTATAGCTAGACGGAC 60.073 46.154 12.62 0.00 0.00 4.79
2590 2663 3.808726 ACTCAAGTATAGCTAGACGGACG 59.191 47.826 12.62 10.39 0.00 4.79
2591 2664 4.056740 CTCAAGTATAGCTAGACGGACGA 58.943 47.826 12.62 7.29 0.00 4.20
2592 2665 3.806521 TCAAGTATAGCTAGACGGACGAC 59.193 47.826 12.62 0.00 0.00 4.34
2593 2666 3.465742 AGTATAGCTAGACGGACGACA 57.534 47.619 12.62 0.00 0.00 4.35
2594 2667 4.005487 AGTATAGCTAGACGGACGACAT 57.995 45.455 12.62 0.00 0.00 3.06
2595 2668 4.387598 AGTATAGCTAGACGGACGACATT 58.612 43.478 12.62 0.00 0.00 2.71
2596 2669 5.545588 AGTATAGCTAGACGGACGACATTA 58.454 41.667 12.62 0.00 0.00 1.90
2597 2670 6.171921 AGTATAGCTAGACGGACGACATTAT 58.828 40.000 12.62 0.00 0.00 1.28
2598 2671 7.326454 AGTATAGCTAGACGGACGACATTATA 58.674 38.462 12.62 0.00 0.00 0.98
2599 2672 7.821359 AGTATAGCTAGACGGACGACATTATAA 59.179 37.037 12.62 0.00 0.00 0.98
2600 2673 5.359716 AGCTAGACGGACGACATTATAAG 57.640 43.478 0.00 0.00 0.00 1.73
2601 2674 3.913163 GCTAGACGGACGACATTATAAGC 59.087 47.826 0.00 0.00 0.00 3.09
2602 2675 4.320348 GCTAGACGGACGACATTATAAGCT 60.320 45.833 0.00 0.00 0.00 3.74
2603 2676 4.226113 AGACGGACGACATTATAAGCTC 57.774 45.455 0.00 0.00 0.00 4.09
2604 2677 2.971915 GACGGACGACATTATAAGCTCG 59.028 50.000 11.26 11.26 0.00 5.03
2605 2678 2.615447 ACGGACGACATTATAAGCTCGA 59.385 45.455 17.21 0.00 0.00 4.04
2606 2679 3.252701 ACGGACGACATTATAAGCTCGAT 59.747 43.478 17.21 5.83 0.00 3.59
2607 2680 3.846896 CGGACGACATTATAAGCTCGATC 59.153 47.826 17.21 11.85 0.00 3.69
2608 2681 4.612939 CGGACGACATTATAAGCTCGATCA 60.613 45.833 17.21 0.00 0.00 2.92
2609 2682 5.220381 GGACGACATTATAAGCTCGATCAA 58.780 41.667 17.21 0.00 0.00 2.57
2610 2683 5.117287 GGACGACATTATAAGCTCGATCAAC 59.883 44.000 17.21 6.70 0.00 3.18
2611 2684 5.833082 ACGACATTATAAGCTCGATCAACT 58.167 37.500 17.21 0.00 0.00 3.16
2612 2685 6.967135 ACGACATTATAAGCTCGATCAACTA 58.033 36.000 17.21 0.00 0.00 2.24
2613 2686 7.594714 ACGACATTATAAGCTCGATCAACTAT 58.405 34.615 17.21 0.00 0.00 2.12
2614 2687 8.082852 ACGACATTATAAGCTCGATCAACTATT 58.917 33.333 17.21 0.00 0.00 1.73
2615 2688 9.556030 CGACATTATAAGCTCGATCAACTATTA 57.444 33.333 8.28 0.00 0.00 0.98
2619 2692 8.744008 TTATAAGCTCGATCAACTATTACTGC 57.256 34.615 0.00 0.00 0.00 4.40
2620 2693 4.655762 AGCTCGATCAACTATTACTGCA 57.344 40.909 0.00 0.00 0.00 4.41
2621 2694 4.615949 AGCTCGATCAACTATTACTGCAG 58.384 43.478 13.48 13.48 0.00 4.41
2622 2695 4.339530 AGCTCGATCAACTATTACTGCAGA 59.660 41.667 23.35 0.00 0.00 4.26
2623 2696 4.442733 GCTCGATCAACTATTACTGCAGAC 59.557 45.833 23.35 0.00 0.00 3.51
2624 2697 5.734786 GCTCGATCAACTATTACTGCAGACT 60.735 44.000 23.35 6.70 0.00 3.24
2625 2698 5.582550 TCGATCAACTATTACTGCAGACTG 58.417 41.667 23.35 7.97 0.00 3.51
2626 2699 5.357032 TCGATCAACTATTACTGCAGACTGA 59.643 40.000 23.35 11.40 0.00 3.41
2627 2700 6.036470 CGATCAACTATTACTGCAGACTGAA 58.964 40.000 23.35 9.05 0.00 3.02
2628 2701 6.531594 CGATCAACTATTACTGCAGACTGAAA 59.468 38.462 23.35 6.69 0.00 2.69
2629 2702 7.253917 CGATCAACTATTACTGCAGACTGAAAG 60.254 40.741 23.35 11.76 42.29 2.62
2630 2703 6.993079 TCAACTATTACTGCAGACTGAAAGA 58.007 36.000 23.35 6.33 37.43 2.52
2631 2704 6.868864 TCAACTATTACTGCAGACTGAAAGAC 59.131 38.462 23.35 0.00 37.43 3.01
2632 2705 6.597832 ACTATTACTGCAGACTGAAAGACT 57.402 37.500 23.35 0.00 40.27 3.24
2639 2712 2.246719 AGACTGAAAGACTGTGGCAC 57.753 50.000 11.55 11.55 37.63 5.01
2640 2713 0.861837 GACTGAAAGACTGTGGCACG 59.138 55.000 13.77 10.33 37.43 5.34
2641 2714 1.160329 ACTGAAAGACTGTGGCACGC 61.160 55.000 13.77 4.99 37.43 5.34
2642 2715 1.159713 CTGAAAGACTGTGGCACGCA 61.160 55.000 13.77 0.00 42.55 5.24
2643 2716 2.476725 CTGAAAGACTGTGGCACGCAT 61.477 52.381 13.77 0.00 43.68 4.73
2644 2717 4.562199 CTGAAAGACTGTGGCACGCATG 62.562 54.545 13.77 5.73 43.68 4.06
2650 2723 2.101575 GTGGCACGCATGAGCATG 59.898 61.111 0.00 6.11 42.27 4.06
2651 2724 3.135457 TGGCACGCATGAGCATGG 61.135 61.111 12.00 5.29 42.27 3.66
2652 2725 2.825387 GGCACGCATGAGCATGGA 60.825 61.111 12.00 0.00 42.27 3.41
2653 2726 2.713770 GCACGCATGAGCATGGAG 59.286 61.111 12.00 3.21 42.27 3.86
2654 2727 2.110967 GCACGCATGAGCATGGAGT 61.111 57.895 12.00 0.00 42.27 3.85
2655 2728 1.651240 GCACGCATGAGCATGGAGTT 61.651 55.000 12.00 0.00 42.27 3.01
2656 2729 0.098200 CACGCATGAGCATGGAGTTG 59.902 55.000 12.00 0.00 42.27 3.16
2657 2730 1.063649 CGCATGAGCATGGAGTTGC 59.936 57.895 12.00 0.00 42.27 4.17
2658 2731 1.650314 CGCATGAGCATGGAGTTGCA 61.650 55.000 12.00 0.00 45.23 4.08
2659 2732 0.179145 GCATGAGCATGGAGTTGCAC 60.179 55.000 12.00 0.00 45.23 4.57
2660 2733 1.170442 CATGAGCATGGAGTTGCACA 58.830 50.000 2.54 0.00 45.11 4.57
2661 2734 1.132453 CATGAGCATGGAGTTGCACAG 59.868 52.381 2.54 0.00 44.44 3.66
2662 2735 0.109153 TGAGCATGGAGTTGCACAGT 59.891 50.000 0.00 0.00 45.23 3.55
2663 2736 0.801251 GAGCATGGAGTTGCACAGTC 59.199 55.000 0.00 0.00 45.23 3.51
2664 2737 0.399454 AGCATGGAGTTGCACAGTCT 59.601 50.000 0.00 0.00 45.23 3.24
2665 2738 0.801251 GCATGGAGTTGCACAGTCTC 59.199 55.000 0.00 0.00 42.31 3.36
2666 2739 1.879372 GCATGGAGTTGCACAGTCTCA 60.879 52.381 0.00 0.00 42.31 3.27
2667 2740 2.708051 CATGGAGTTGCACAGTCTCAT 58.292 47.619 0.00 0.00 0.00 2.90
2668 2741 2.462456 TGGAGTTGCACAGTCTCATC 57.538 50.000 0.00 0.00 0.00 2.92
2669 2742 1.337167 TGGAGTTGCACAGTCTCATCG 60.337 52.381 0.00 0.00 0.00 3.84
2670 2743 1.067565 GGAGTTGCACAGTCTCATCGA 60.068 52.381 0.00 0.00 0.00 3.59
2671 2744 2.417924 GGAGTTGCACAGTCTCATCGAT 60.418 50.000 0.00 0.00 0.00 3.59
2672 2745 3.181486 GGAGTTGCACAGTCTCATCGATA 60.181 47.826 0.00 0.00 0.00 2.92
2673 2746 4.500545 GGAGTTGCACAGTCTCATCGATAT 60.501 45.833 0.00 0.00 0.00 1.63
2674 2747 5.278512 GGAGTTGCACAGTCTCATCGATATA 60.279 44.000 0.00 0.00 0.00 0.86
2675 2748 5.767269 AGTTGCACAGTCTCATCGATATAG 58.233 41.667 0.00 0.00 0.00 1.31
2676 2749 5.300539 AGTTGCACAGTCTCATCGATATAGT 59.699 40.000 0.00 0.00 0.00 2.12
2677 2750 5.363979 TGCACAGTCTCATCGATATAGTC 57.636 43.478 0.00 0.00 0.00 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.671921 GCCATACACCAAATCATTATCTATGAG 58.328 37.037 0.00 0.00 46.06 2.90
1 2 8.162746 TGCCATACACCAAATCATTATCTATGA 58.837 33.333 0.00 0.00 46.86 2.15
2 3 8.239314 GTGCCATACACCAAATCATTATCTATG 58.761 37.037 0.00 0.00 44.02 2.23
3 4 8.340618 GTGCCATACACCAAATCATTATCTAT 57.659 34.615 0.00 0.00 44.02 1.98
4 5 7.744087 GTGCCATACACCAAATCATTATCTA 57.256 36.000 0.00 0.00 44.02 1.98
5 6 6.639632 GTGCCATACACCAAATCATTATCT 57.360 37.500 0.00 0.00 44.02 1.98
19 20 4.359434 TTGGTTCAGTAAGTGCCATACA 57.641 40.909 0.00 0.00 0.00 2.29
20 21 6.765989 TGATATTGGTTCAGTAAGTGCCATAC 59.234 38.462 0.00 0.00 0.00 2.39
21 22 6.894682 TGATATTGGTTCAGTAAGTGCCATA 58.105 36.000 0.00 0.00 0.00 2.74
22 23 5.754782 TGATATTGGTTCAGTAAGTGCCAT 58.245 37.500 0.00 0.00 0.00 4.40
23 24 5.172687 TGATATTGGTTCAGTAAGTGCCA 57.827 39.130 0.00 0.00 0.00 4.92
24 25 6.095440 ACAATGATATTGGTTCAGTAAGTGCC 59.905 38.462 6.51 0.00 0.00 5.01
25 26 7.088589 ACAATGATATTGGTTCAGTAAGTGC 57.911 36.000 6.51 0.00 0.00 4.40
60 61 8.517878 GGTAATAGTCATATGAGCATTGCAAAT 58.482 33.333 19.83 6.38 0.00 2.32
61 62 7.307930 CGGTAATAGTCATATGAGCATTGCAAA 60.308 37.037 19.83 0.00 0.00 3.68
62 63 6.147656 CGGTAATAGTCATATGAGCATTGCAA 59.852 38.462 19.83 0.00 0.00 4.08
63 64 5.639082 CGGTAATAGTCATATGAGCATTGCA 59.361 40.000 19.83 0.00 0.00 4.08
64 65 5.063944 CCGGTAATAGTCATATGAGCATTGC 59.936 44.000 5.42 11.27 0.00 3.56
65 66 6.398095 TCCGGTAATAGTCATATGAGCATTG 58.602 40.000 5.42 0.00 0.00 2.82
66 67 6.605471 TCCGGTAATAGTCATATGAGCATT 57.395 37.500 5.42 10.70 0.00 3.56
67 68 6.798427 ATCCGGTAATAGTCATATGAGCAT 57.202 37.500 5.42 0.00 0.00 3.79
68 69 6.398095 CAATCCGGTAATAGTCATATGAGCA 58.602 40.000 5.42 0.00 0.00 4.26
69 70 5.812642 CCAATCCGGTAATAGTCATATGAGC 59.187 44.000 5.42 1.50 0.00 4.26
70 71 7.170393 TCCAATCCGGTAATAGTCATATGAG 57.830 40.000 5.42 0.00 35.57 2.90
71 72 7.733773 ATCCAATCCGGTAATAGTCATATGA 57.266 36.000 0.00 0.00 35.57 2.15
72 73 9.481340 CATATCCAATCCGGTAATAGTCATATG 57.519 37.037 0.00 0.00 35.57 1.78
73 74 9.434275 TCATATCCAATCCGGTAATAGTCATAT 57.566 33.333 0.00 0.00 35.57 1.78
74 75 8.832458 TCATATCCAATCCGGTAATAGTCATA 57.168 34.615 0.00 0.00 35.57 2.15
75 76 7.733773 TCATATCCAATCCGGTAATAGTCAT 57.266 36.000 0.00 0.00 35.57 3.06
76 77 7.733773 ATCATATCCAATCCGGTAATAGTCA 57.266 36.000 0.00 0.00 35.57 3.41
77 78 9.449719 AAAATCATATCCAATCCGGTAATAGTC 57.550 33.333 0.00 0.00 35.57 2.59
78 79 9.807921 AAAAATCATATCCAATCCGGTAATAGT 57.192 29.630 0.00 0.00 35.57 2.12
103 104 8.313292 AGTCATAGGAGCATTGCAAATTAAAAA 58.687 29.630 11.91 0.00 0.00 1.94
104 105 7.839907 AGTCATAGGAGCATTGCAAATTAAAA 58.160 30.769 11.91 0.00 0.00 1.52
105 106 7.408756 AGTCATAGGAGCATTGCAAATTAAA 57.591 32.000 11.91 0.00 0.00 1.52
106 107 7.408756 AAGTCATAGGAGCATTGCAAATTAA 57.591 32.000 11.91 0.00 0.00 1.40
107 108 7.775093 AGTAAGTCATAGGAGCATTGCAAATTA 59.225 33.333 11.91 0.00 0.00 1.40
108 109 5.927281 AAGTCATAGGAGCATTGCAAATT 57.073 34.783 11.91 0.00 0.00 1.82
109 110 6.039047 CAGTAAGTCATAGGAGCATTGCAAAT 59.961 38.462 11.91 0.00 0.00 2.32
110 111 5.355071 CAGTAAGTCATAGGAGCATTGCAAA 59.645 40.000 11.91 0.00 0.00 3.68
111 112 4.877823 CAGTAAGTCATAGGAGCATTGCAA 59.122 41.667 11.91 0.00 0.00 4.08
112 113 4.445453 CAGTAAGTCATAGGAGCATTGCA 58.555 43.478 11.91 0.00 0.00 4.08
113 114 3.812053 CCAGTAAGTCATAGGAGCATTGC 59.188 47.826 0.00 0.00 0.00 3.56
114 115 5.282055 TCCAGTAAGTCATAGGAGCATTG 57.718 43.478 0.00 0.00 0.00 2.82
115 116 5.604231 TGATCCAGTAAGTCATAGGAGCATT 59.396 40.000 0.00 0.00 39.58 3.56
116 117 5.150715 TGATCCAGTAAGTCATAGGAGCAT 58.849 41.667 0.00 0.00 39.58 3.79
117 118 4.546674 TGATCCAGTAAGTCATAGGAGCA 58.453 43.478 0.00 0.00 41.92 4.26
118 119 4.830046 TCTGATCCAGTAAGTCATAGGAGC 59.170 45.833 0.00 0.00 35.44 4.70
119 120 8.685427 CATATCTGATCCAGTAAGTCATAGGAG 58.315 40.741 0.00 0.00 32.61 3.69
120 121 8.394040 TCATATCTGATCCAGTAAGTCATAGGA 58.606 37.037 0.00 0.00 32.61 2.94
121 122 8.586879 TCATATCTGATCCAGTAAGTCATAGG 57.413 38.462 0.00 0.00 32.61 2.57
124 125 8.878211 ACAATCATATCTGATCCAGTAAGTCAT 58.122 33.333 0.00 0.00 41.34 3.06
125 126 8.255111 ACAATCATATCTGATCCAGTAAGTCA 57.745 34.615 0.00 0.00 41.34 3.41
126 127 8.986847 CAACAATCATATCTGATCCAGTAAGTC 58.013 37.037 0.00 0.00 41.34 3.01
127 128 7.443575 GCAACAATCATATCTGATCCAGTAAGT 59.556 37.037 0.00 0.00 41.34 2.24
128 129 7.094890 GGCAACAATCATATCTGATCCAGTAAG 60.095 40.741 0.00 0.00 41.34 2.34
129 130 6.712095 GGCAACAATCATATCTGATCCAGTAA 59.288 38.462 0.00 0.00 41.34 2.24
130 131 6.233434 GGCAACAATCATATCTGATCCAGTA 58.767 40.000 0.00 0.00 41.34 2.74
131 132 5.068636 GGCAACAATCATATCTGATCCAGT 58.931 41.667 0.00 0.00 41.34 4.00
132 133 4.153655 CGGCAACAATCATATCTGATCCAG 59.846 45.833 0.00 0.00 41.34 3.86
133 134 4.067192 CGGCAACAATCATATCTGATCCA 58.933 43.478 0.00 0.00 41.34 3.41
134 135 3.438087 CCGGCAACAATCATATCTGATCC 59.562 47.826 0.00 0.00 41.34 3.36
135 136 3.120060 GCCGGCAACAATCATATCTGATC 60.120 47.826 24.80 0.00 41.34 2.92
136 137 2.816087 GCCGGCAACAATCATATCTGAT 59.184 45.455 24.80 0.00 44.14 2.90
137 138 2.221169 GCCGGCAACAATCATATCTGA 58.779 47.619 24.80 0.00 35.41 3.27
138 139 1.948834 TGCCGGCAACAATCATATCTG 59.051 47.619 30.74 0.00 0.00 2.90
139 140 2.346766 TGCCGGCAACAATCATATCT 57.653 45.000 30.74 0.00 0.00 1.98
150 151 3.736100 CAGCGATGTTGCCGGCAA 61.736 61.111 37.30 37.30 34.65 4.52
157 158 3.803082 CACCCGGCAGCGATGTTG 61.803 66.667 1.22 0.00 0.00 3.33
175 176 3.950794 TAGGAAGTGCGGCTTGCCG 62.951 63.158 27.32 27.32 45.25 5.69
176 177 2.046314 TAGGAAGTGCGGCTTGCC 60.046 61.111 0.00 0.75 45.25 4.52
177 178 2.399356 GGTAGGAAGTGCGGCTTGC 61.399 63.158 0.00 4.58 44.59 4.01
178 179 0.535335 TAGGTAGGAAGTGCGGCTTG 59.465 55.000 0.00 0.00 37.59 4.01
179 180 0.824759 CTAGGTAGGAAGTGCGGCTT 59.175 55.000 0.00 0.00 40.76 4.35
180 181 0.324460 ACTAGGTAGGAAGTGCGGCT 60.324 55.000 0.00 0.00 0.00 5.52
181 182 0.535797 AACTAGGTAGGAAGTGCGGC 59.464 55.000 0.00 0.00 0.00 6.53
182 183 4.098960 TCAATAACTAGGTAGGAAGTGCGG 59.901 45.833 0.00 0.00 0.00 5.69
183 184 5.041940 GTCAATAACTAGGTAGGAAGTGCG 58.958 45.833 0.00 0.00 0.00 5.34
184 185 5.041940 CGTCAATAACTAGGTAGGAAGTGC 58.958 45.833 0.00 0.00 0.00 4.40
185 186 6.446781 TCGTCAATAACTAGGTAGGAAGTG 57.553 41.667 0.00 0.00 0.00 3.16
186 187 5.593502 CCTCGTCAATAACTAGGTAGGAAGT 59.406 44.000 0.00 0.00 36.34 3.01
187 188 5.507650 GCCTCGTCAATAACTAGGTAGGAAG 60.508 48.000 0.00 0.00 41.78 3.46
188 189 4.340381 GCCTCGTCAATAACTAGGTAGGAA 59.660 45.833 0.00 0.00 41.78 3.36
189 190 3.887716 GCCTCGTCAATAACTAGGTAGGA 59.112 47.826 0.00 0.00 41.78 2.94
190 191 3.005578 GGCCTCGTCAATAACTAGGTAGG 59.994 52.174 0.00 0.00 41.78 3.18
191 192 3.635373 TGGCCTCGTCAATAACTAGGTAG 59.365 47.826 3.32 0.00 41.78 3.18
192 193 3.634504 TGGCCTCGTCAATAACTAGGTA 58.365 45.455 3.32 0.00 41.78 3.08
193 194 2.463752 TGGCCTCGTCAATAACTAGGT 58.536 47.619 3.32 0.00 41.78 3.08
194 195 3.555168 GGATGGCCTCGTCAATAACTAGG 60.555 52.174 3.32 0.00 42.47 3.02
195 196 3.322254 AGGATGGCCTCGTCAATAACTAG 59.678 47.826 3.32 0.00 42.19 2.57
196 197 3.069586 CAGGATGGCCTCGTCAATAACTA 59.930 47.826 3.32 0.00 44.80 2.24
197 198 2.119495 AGGATGGCCTCGTCAATAACT 58.881 47.619 3.32 0.00 42.19 2.24
198 199 2.213499 CAGGATGGCCTCGTCAATAAC 58.787 52.381 3.32 0.00 44.80 1.89
199 200 1.837439 ACAGGATGGCCTCGTCAATAA 59.163 47.619 3.32 0.00 44.80 1.40
200 201 1.496060 ACAGGATGGCCTCGTCAATA 58.504 50.000 3.32 0.00 44.80 1.90
201 202 1.496060 TACAGGATGGCCTCGTCAAT 58.504 50.000 3.32 0.00 44.80 2.57
202 203 1.412710 GATACAGGATGGCCTCGTCAA 59.587 52.381 3.32 0.00 44.80 3.18
203 204 1.040646 GATACAGGATGGCCTCGTCA 58.959 55.000 3.32 0.00 44.80 4.35
204 205 0.039074 CGATACAGGATGGCCTCGTC 60.039 60.000 3.32 0.00 44.80 4.20
205 206 0.755698 ACGATACAGGATGGCCTCGT 60.756 55.000 3.32 5.30 44.80 4.18
206 207 1.244816 TACGATACAGGATGGCCTCG 58.755 55.000 3.32 4.54 44.80 4.63
207 208 3.963428 AATACGATACAGGATGGCCTC 57.037 47.619 3.32 0.00 44.80 4.70
209 210 3.740115 ACAAATACGATACAGGATGGCC 58.260 45.455 0.00 0.00 43.62 5.36
210 211 4.814234 TCAACAAATACGATACAGGATGGC 59.186 41.667 0.00 0.00 43.62 4.40
211 212 5.236478 GGTCAACAAATACGATACAGGATGG 59.764 44.000 0.00 0.00 43.62 3.51
212 213 5.815222 TGGTCAACAAATACGATACAGGATG 59.185 40.000 0.00 0.00 46.00 3.51
213 214 5.815740 GTGGTCAACAAATACGATACAGGAT 59.184 40.000 0.00 0.00 0.00 3.24
214 215 5.172934 GTGGTCAACAAATACGATACAGGA 58.827 41.667 0.00 0.00 0.00 3.86
215 216 4.331717 GGTGGTCAACAAATACGATACAGG 59.668 45.833 0.00 0.00 0.00 4.00
216 217 4.932799 TGGTGGTCAACAAATACGATACAG 59.067 41.667 0.00 0.00 0.00 2.74
217 218 4.895961 TGGTGGTCAACAAATACGATACA 58.104 39.130 0.00 0.00 0.00 2.29
218 219 6.431198 AATGGTGGTCAACAAATACGATAC 57.569 37.500 0.00 0.00 0.00 2.24
219 220 8.616942 CAATAATGGTGGTCAACAAATACGATA 58.383 33.333 0.00 0.00 0.00 2.92
220 221 7.122055 ACAATAATGGTGGTCAACAAATACGAT 59.878 33.333 0.00 0.00 0.00 3.73
221 222 6.431543 ACAATAATGGTGGTCAACAAATACGA 59.568 34.615 0.00 0.00 0.00 3.43
222 223 6.616947 ACAATAATGGTGGTCAACAAATACG 58.383 36.000 0.00 0.00 0.00 3.06
223 224 9.915629 TTTACAATAATGGTGGTCAACAAATAC 57.084 29.630 0.00 0.00 0.00 1.89
225 226 8.646900 ACTTTACAATAATGGTGGTCAACAAAT 58.353 29.630 0.00 0.00 0.00 2.32
226 227 8.012957 ACTTTACAATAATGGTGGTCAACAAA 57.987 30.769 0.00 0.00 0.00 2.83
227 228 7.285629 TGACTTTACAATAATGGTGGTCAACAA 59.714 33.333 0.00 0.00 0.00 2.83
228 229 6.773200 TGACTTTACAATAATGGTGGTCAACA 59.227 34.615 0.00 0.00 0.00 3.33
229 230 7.209471 TGACTTTACAATAATGGTGGTCAAC 57.791 36.000 0.00 0.00 0.00 3.18
230 231 9.693739 ATATGACTTTACAATAATGGTGGTCAA 57.306 29.630 0.00 0.00 33.37 3.18
231 232 9.119418 CATATGACTTTACAATAATGGTGGTCA 57.881 33.333 0.00 0.00 33.78 4.02
232 233 9.337396 TCATATGACTTTACAATAATGGTGGTC 57.663 33.333 0.00 0.00 0.00 4.02
233 234 9.120538 GTCATATGACTTTACAATAATGGTGGT 57.879 33.333 25.52 0.00 41.65 4.16
234 235 9.119418 TGTCATATGACTTTACAATAATGGTGG 57.881 33.333 30.67 0.00 44.99 4.61
235 236 9.935682 GTGTCATATGACTTTACAATAATGGTG 57.064 33.333 30.67 0.00 44.99 4.17
236 237 9.905713 AGTGTCATATGACTTTACAATAATGGT 57.094 29.630 30.67 5.55 44.99 3.55
242 243 9.394767 TGCAATAGTGTCATATGACTTTACAAT 57.605 29.630 30.67 16.10 44.99 2.71
243 244 8.785329 TGCAATAGTGTCATATGACTTTACAA 57.215 30.769 30.67 11.57 44.99 2.41
244 245 8.664798 GTTGCAATAGTGTCATATGACTTTACA 58.335 33.333 30.67 18.25 44.99 2.41
245 246 8.664798 TGTTGCAATAGTGTCATATGACTTTAC 58.335 33.333 30.67 22.17 44.99 2.01
246 247 8.785329 TGTTGCAATAGTGTCATATGACTTTA 57.215 30.769 30.67 23.06 44.99 1.85
247 248 7.686438 TGTTGCAATAGTGTCATATGACTTT 57.314 32.000 30.67 21.93 44.99 2.66
248 249 7.686438 TTGTTGCAATAGTGTCATATGACTT 57.314 32.000 30.67 22.22 44.99 3.01
249 250 7.391554 AGTTTGTTGCAATAGTGTCATATGACT 59.608 33.333 30.67 17.63 44.99 3.41
250 251 7.530010 AGTTTGTTGCAATAGTGTCATATGAC 58.470 34.615 25.95 25.95 44.97 3.06
251 252 7.686438 AGTTTGTTGCAATAGTGTCATATGA 57.314 32.000 0.59 0.00 0.00 2.15
252 253 8.239314 AGAAGTTTGTTGCAATAGTGTCATATG 58.761 33.333 0.59 0.00 0.00 1.78
253 254 8.340618 AGAAGTTTGTTGCAATAGTGTCATAT 57.659 30.769 0.59 0.00 0.00 1.78
254 255 7.744087 AGAAGTTTGTTGCAATAGTGTCATA 57.256 32.000 0.59 0.00 0.00 2.15
255 256 6.639632 AGAAGTTTGTTGCAATAGTGTCAT 57.360 33.333 0.59 0.00 0.00 3.06
256 257 6.318648 AGAAGAAGTTTGTTGCAATAGTGTCA 59.681 34.615 0.59 0.00 0.00 3.58
257 258 6.729187 AGAAGAAGTTTGTTGCAATAGTGTC 58.271 36.000 0.59 0.00 0.00 3.67
258 259 6.699575 AGAAGAAGTTTGTTGCAATAGTGT 57.300 33.333 0.59 0.00 0.00 3.55
259 260 6.358030 CGAAGAAGAAGTTTGTTGCAATAGTG 59.642 38.462 0.59 0.00 0.00 2.74
260 261 6.430451 CGAAGAAGAAGTTTGTTGCAATAGT 58.570 36.000 0.59 0.00 0.00 2.12
261 262 5.853282 CCGAAGAAGAAGTTTGTTGCAATAG 59.147 40.000 0.59 0.00 0.00 1.73
262 263 5.529430 TCCGAAGAAGAAGTTTGTTGCAATA 59.471 36.000 0.59 0.00 0.00 1.90
263 264 4.338118 TCCGAAGAAGAAGTTTGTTGCAAT 59.662 37.500 0.59 0.00 0.00 3.56
264 265 3.692101 TCCGAAGAAGAAGTTTGTTGCAA 59.308 39.130 0.00 0.00 0.00 4.08
265 266 3.275143 TCCGAAGAAGAAGTTTGTTGCA 58.725 40.909 0.00 0.00 0.00 4.08
266 267 3.312697 ACTCCGAAGAAGAAGTTTGTTGC 59.687 43.478 0.00 0.00 0.00 4.17
267 268 4.318121 CGACTCCGAAGAAGAAGTTTGTTG 60.318 45.833 0.00 0.00 38.22 3.33
268 269 3.802685 CGACTCCGAAGAAGAAGTTTGTT 59.197 43.478 0.00 0.00 38.22 2.83
269 270 3.067742 TCGACTCCGAAGAAGAAGTTTGT 59.932 43.478 0.00 0.00 42.51 2.83
270 271 3.639538 TCGACTCCGAAGAAGAAGTTTG 58.360 45.455 0.00 0.00 42.51 2.93
282 283 0.958876 TAAGCTGCAGTCGACTCCGA 60.959 55.000 16.96 1.02 43.35 4.55
283 284 0.798771 GTAAGCTGCAGTCGACTCCG 60.799 60.000 16.96 6.84 37.07 4.63
284 285 0.798771 CGTAAGCTGCAGTCGACTCC 60.799 60.000 16.96 7.51 0.00 3.85
285 286 2.643044 CGTAAGCTGCAGTCGACTC 58.357 57.895 16.96 11.33 0.00 3.36
286 287 4.870305 CGTAAGCTGCAGTCGACT 57.130 55.556 13.58 13.58 0.00 4.18
298 299 2.347452 CACGGTTGTCAATAGGCGTAAG 59.653 50.000 0.00 0.00 43.44 2.34
299 300 2.288948 ACACGGTTGTCAATAGGCGTAA 60.289 45.455 0.00 0.00 0.00 3.18
300 301 1.273048 ACACGGTTGTCAATAGGCGTA 59.727 47.619 0.00 0.00 0.00 4.42
301 302 0.034337 ACACGGTTGTCAATAGGCGT 59.966 50.000 0.00 0.00 0.00 5.68
302 303 2.835605 ACACGGTTGTCAATAGGCG 58.164 52.632 0.00 0.00 0.00 5.52
311 312 1.300388 GTGCCTACGACACGGTTGT 60.300 57.895 0.00 2.99 39.32 3.32
312 313 0.876777 TTGTGCCTACGACACGGTTG 60.877 55.000 0.00 0.00 41.03 3.77
313 314 0.034337 ATTGTGCCTACGACACGGTT 59.966 50.000 0.00 0.00 41.03 4.44
314 315 0.034337 AATTGTGCCTACGACACGGT 59.966 50.000 0.00 0.00 41.03 4.83
315 316 0.442310 CAATTGTGCCTACGACACGG 59.558 55.000 0.00 0.00 41.03 4.94
316 317 0.179225 GCAATTGTGCCTACGACACG 60.179 55.000 7.40 0.00 45.68 4.49
317 318 3.676091 GCAATTGTGCCTACGACAC 57.324 52.632 7.40 0.00 45.68 3.67
333 334 8.518702 TCTGTTGTTGCAACTAAATTATATGCA 58.481 29.630 28.61 11.89 44.54 3.96
334 335 8.909708 TCTGTTGTTGCAACTAAATTATATGC 57.090 30.769 28.61 8.10 37.52 3.14
338 339 9.816354 AAACTTCTGTTGTTGCAACTAAATTAT 57.184 25.926 28.61 7.23 36.39 1.28
339 340 9.081997 CAAACTTCTGTTGTTGCAACTAAATTA 57.918 29.630 28.61 6.03 36.39 1.40
340 341 7.064490 CCAAACTTCTGTTGTTGCAACTAAATT 59.936 33.333 28.61 6.55 36.39 1.82
341 342 6.534793 CCAAACTTCTGTTGTTGCAACTAAAT 59.465 34.615 28.61 0.23 36.39 1.40
342 343 5.866633 CCAAACTTCTGTTGTTGCAACTAAA 59.133 36.000 28.61 16.67 36.39 1.85
343 344 5.184096 TCCAAACTTCTGTTGTTGCAACTAA 59.816 36.000 28.61 18.25 36.39 2.24
344 345 4.702612 TCCAAACTTCTGTTGTTGCAACTA 59.297 37.500 28.61 19.86 36.39 2.24
345 346 3.509575 TCCAAACTTCTGTTGTTGCAACT 59.490 39.130 28.61 4.49 36.39 3.16
346 347 3.843999 TCCAAACTTCTGTTGTTGCAAC 58.156 40.909 22.83 22.83 36.39 4.17
347 348 4.159321 TCATCCAAACTTCTGTTGTTGCAA 59.841 37.500 0.00 0.00 36.39 4.08
348 349 3.698539 TCATCCAAACTTCTGTTGTTGCA 59.301 39.130 0.00 0.00 36.39 4.08
349 350 4.305989 TCATCCAAACTTCTGTTGTTGC 57.694 40.909 0.00 0.00 36.39 4.17
350 351 7.596494 ACATATCATCCAAACTTCTGTTGTTG 58.404 34.615 0.00 0.00 36.39 3.33
351 352 7.448161 TGACATATCATCCAAACTTCTGTTGTT 59.552 33.333 0.00 0.00 36.39 2.83
352 353 6.942005 TGACATATCATCCAAACTTCTGTTGT 59.058 34.615 0.00 0.00 36.39 3.32
353 354 7.381766 TGACATATCATCCAAACTTCTGTTG 57.618 36.000 0.00 0.00 36.39 3.33
354 355 8.585471 ATTGACATATCATCCAAACTTCTGTT 57.415 30.769 0.00 0.00 34.43 3.16
355 356 8.585471 AATTGACATATCATCCAAACTTCTGT 57.415 30.769 0.00 0.00 33.85 3.41
356 357 9.865321 AAAATTGACATATCATCCAAACTTCTG 57.135 29.630 0.00 0.00 33.85 3.02
390 391 2.972144 TATGCCGGTGCGTTGCAAC 61.972 57.895 19.89 19.89 43.63 4.17
391 392 2.669910 TATGCCGGTGCGTTGCAA 60.670 55.556 1.90 0.00 41.47 4.08
392 393 3.427425 GTATGCCGGTGCGTTGCA 61.427 61.111 1.90 0.00 41.78 4.08
393 394 4.514569 CGTATGCCGGTGCGTTGC 62.515 66.667 1.90 0.00 41.78 4.17
394 395 3.115892 ACGTATGCCGGTGCGTTG 61.116 61.111 1.90 0.00 37.11 4.10
395 396 3.115892 CACGTATGCCGGTGCGTT 61.116 61.111 1.90 0.00 38.36 4.84
424 425 9.400208 TCCTCTCCTCTAGATCTAATCTTCTTA 57.600 37.037 3.57 0.00 40.76 2.10
425 426 8.287904 TCCTCTCCTCTAGATCTAATCTTCTT 57.712 38.462 3.57 0.00 40.76 2.52
426 427 7.888514 TCCTCTCCTCTAGATCTAATCTTCT 57.111 40.000 3.57 0.00 40.76 2.85
427 428 8.934023 TTTCCTCTCCTCTAGATCTAATCTTC 57.066 38.462 3.57 0.00 40.76 2.87
428 429 9.367160 CTTTTCCTCTCCTCTAGATCTAATCTT 57.633 37.037 3.57 0.00 40.76 2.40
429 430 7.451566 GCTTTTCCTCTCCTCTAGATCTAATCT 59.548 40.741 3.57 0.00 43.33 2.40
430 431 7.309805 GGCTTTTCCTCTCCTCTAGATCTAATC 60.310 44.444 3.57 0.00 32.41 1.75
431 432 6.496911 GGCTTTTCCTCTCCTCTAGATCTAAT 59.503 42.308 3.57 0.00 32.41 1.73
432 433 5.836358 GGCTTTTCCTCTCCTCTAGATCTAA 59.164 44.000 3.57 0.00 32.41 2.10
433 434 5.135362 AGGCTTTTCCTCTCCTCTAGATCTA 59.865 44.000 1.69 1.69 43.20 1.98
434 435 4.078630 AGGCTTTTCCTCTCCTCTAGATCT 60.079 45.833 0.00 0.00 43.20 2.75
435 436 4.039124 CAGGCTTTTCCTCTCCTCTAGATC 59.961 50.000 0.00 0.00 45.52 2.75
436 437 3.966665 CAGGCTTTTCCTCTCCTCTAGAT 59.033 47.826 0.00 0.00 45.52 1.98
437 438 3.011821 TCAGGCTTTTCCTCTCCTCTAGA 59.988 47.826 0.00 0.00 45.52 2.43
438 439 3.132111 GTCAGGCTTTTCCTCTCCTCTAG 59.868 52.174 0.00 0.00 45.52 2.43
439 440 3.100671 GTCAGGCTTTTCCTCTCCTCTA 58.899 50.000 0.00 0.00 45.52 2.43
440 441 1.905894 GTCAGGCTTTTCCTCTCCTCT 59.094 52.381 0.00 0.00 45.52 3.69
441 442 1.905894 AGTCAGGCTTTTCCTCTCCTC 59.094 52.381 0.00 0.00 45.52 3.71
442 443 1.905894 GAGTCAGGCTTTTCCTCTCCT 59.094 52.381 0.00 0.00 45.52 3.69
443 444 1.404851 CGAGTCAGGCTTTTCCTCTCC 60.405 57.143 0.00 0.00 45.52 3.71
444 445 1.404851 CCGAGTCAGGCTTTTCCTCTC 60.405 57.143 0.00 0.00 45.52 3.20
478 479 6.260493 CCCTCTTTTGATTGATGAGATGAGAC 59.740 42.308 0.00 0.00 0.00 3.36
479 480 6.157471 TCCCTCTTTTGATTGATGAGATGAGA 59.843 38.462 0.00 0.00 0.00 3.27
480 481 6.354938 TCCCTCTTTTGATTGATGAGATGAG 58.645 40.000 0.00 0.00 0.00 2.90
481 482 6.069789 ACTCCCTCTTTTGATTGATGAGATGA 60.070 38.462 0.00 0.00 0.00 2.92
482 483 6.120905 ACTCCCTCTTTTGATTGATGAGATG 58.879 40.000 0.00 0.00 0.00 2.90
483 484 6.324601 ACTCCCTCTTTTGATTGATGAGAT 57.675 37.500 0.00 0.00 0.00 2.75
484 485 5.768980 ACTCCCTCTTTTGATTGATGAGA 57.231 39.130 0.00 0.00 0.00 3.27
498 499 2.178984 CTCCCATCTTCCTACTCCCTCT 59.821 54.545 0.00 0.00 0.00 3.69
502 503 2.962421 CTCACTCCCATCTTCCTACTCC 59.038 54.545 0.00 0.00 0.00 3.85
503 504 2.962421 CCTCACTCCCATCTTCCTACTC 59.038 54.545 0.00 0.00 0.00 2.59
504 505 2.957312 GCCTCACTCCCATCTTCCTACT 60.957 54.545 0.00 0.00 0.00 2.57
505 506 1.414550 GCCTCACTCCCATCTTCCTAC 59.585 57.143 0.00 0.00 0.00 3.18
626 633 1.451936 GGAGCATACCTGGCGGATT 59.548 57.895 0.00 0.00 36.08 3.01
775 782 0.687757 TCTATCCTTGGGTCGCTGCT 60.688 55.000 0.00 0.00 0.00 4.24
921 928 0.636647 TGAGACTGGGCAGAGGGATA 59.363 55.000 0.00 0.00 0.00 2.59
935 942 2.737376 GGGCGACGGTTGTGAGAC 60.737 66.667 0.00 0.00 0.00 3.36
1005 1015 0.943359 GGATCTTCTGGCTCGCGATG 60.943 60.000 10.36 5.11 0.00 3.84
1173 1186 5.366768 AGGATGGTCTTGGAGATCGAAAATA 59.633 40.000 0.00 0.00 0.00 1.40
1189 1202 2.514824 GCGCTTGGGAGGATGGTC 60.515 66.667 0.00 0.00 0.00 4.02
1479 1512 3.009916 AGACACAATTTCTCCTGATGGCT 59.990 43.478 0.00 0.00 0.00 4.75
1534 1567 1.226831 CAAACACAACCACCCACGC 60.227 57.895 0.00 0.00 0.00 5.34
1535 1568 1.028905 ATCAAACACAACCACCCACG 58.971 50.000 0.00 0.00 0.00 4.94
1580 1613 2.352805 GCTCTTGTGGGTGGGGAG 59.647 66.667 0.00 0.00 0.00 4.30
1672 1705 1.650528 ATACCTCATAGGGCCTGCTC 58.349 55.000 18.53 0.00 40.58 4.26
1698 1731 4.983053 TGGCATTCCAAATGACCAAAATT 58.017 34.783 3.18 0.00 39.99 1.82
1721 1754 4.555511 GCGAAGGGCATGAGTTGATTTATC 60.556 45.833 0.00 0.00 42.87 1.75
1751 1784 9.500785 TTTGTATGACTTGAATCTCAACACATA 57.499 29.630 0.00 0.00 32.97 2.29
1807 1840 2.920869 CCCGATGACGCGAAATCG 59.079 61.111 28.53 28.53 44.09 3.34
1848 1881 0.179045 AGTGGATAAGACGCATGGGC 60.179 55.000 10.10 2.92 0.00 5.36
1852 1885 2.224305 GGGCTAAGTGGATAAGACGCAT 60.224 50.000 0.00 0.00 0.00 4.73
1854 1887 1.138266 TGGGCTAAGTGGATAAGACGC 59.862 52.381 0.00 0.00 0.00 5.19
1857 1890 2.840511 TGGTGGGCTAAGTGGATAAGA 58.159 47.619 0.00 0.00 0.00 2.10
1868 1901 1.048160 TGATGCGAGATGGTGGGCTA 61.048 55.000 0.00 0.00 0.00 3.93
1881 1914 1.604278 TGAGAGGTACGAGATGATGCG 59.396 52.381 0.00 0.00 0.00 4.73
1912 1945 1.281899 GTCACATCAGAAGTAGGCGC 58.718 55.000 0.00 0.00 0.00 6.53
1918 1951 0.247736 GCGGAGGTCACATCAGAAGT 59.752 55.000 0.00 0.00 0.00 3.01
1944 1977 1.334243 GTAGTCGATTCGAGGTGGAGG 59.666 57.143 9.42 0.00 36.23 4.30
1948 1981 0.591741 GGCGTAGTCGATTCGAGGTG 60.592 60.000 9.42 1.35 36.23 4.00
1949 1982 1.722636 GGGCGTAGTCGATTCGAGGT 61.723 60.000 9.42 2.55 36.23 3.85
1954 1987 1.227176 GTGGGGGCGTAGTCGATTC 60.227 63.158 0.00 0.00 39.71 2.52
1955 1988 2.897972 GTGGGGGCGTAGTCGATT 59.102 61.111 0.00 0.00 39.71 3.34
2077 2122 1.130678 GGGATTAGGCAGGAGGAGGG 61.131 65.000 0.00 0.00 0.00 4.30
2119 2164 4.742649 AGCGGGAGGAGCGAGACA 62.743 66.667 0.00 0.00 40.04 3.41
2120 2165 3.418744 GAAGCGGGAGGAGCGAGAC 62.419 68.421 0.00 0.00 40.04 3.36
2214 2259 2.852449 TGAGACAGTTCAGAGAGACGT 58.148 47.619 0.00 0.00 0.00 4.34
2243 2309 1.862827 GTCGGTTTGCTTAGACGTGTT 59.137 47.619 0.00 0.00 0.00 3.32
2246 2312 0.665369 CGGTCGGTTTGCTTAGACGT 60.665 55.000 0.00 0.00 34.68 4.34
2272 2338 3.732212 ACATAGATGCATGCACATACGT 58.268 40.909 25.37 14.38 0.00 3.57
2277 2343 4.768583 TCTTGTACATAGATGCATGCACA 58.231 39.130 25.37 11.08 31.74 4.57
2290 2356 5.237815 TGAATCAAGCGTCTTCTTGTACAT 58.762 37.500 0.00 0.00 42.90 2.29
2323 2393 4.571369 AGCTAGGATTGGATCATGATGG 57.429 45.455 14.30 0.00 0.00 3.51
2380 2453 2.293677 ATATCGACAAGAGTGCGCAA 57.706 45.000 14.00 0.00 0.00 4.85
2414 2487 3.141398 AGAGTGTGCAACTACCACAATG 58.859 45.455 7.10 0.00 44.01 2.82
2418 2491 2.544267 GACAAGAGTGTGCAACTACCAC 59.456 50.000 0.00 0.00 40.07 4.16
2434 2507 1.331756 GATGCCAACTATGCCGACAAG 59.668 52.381 0.00 0.00 0.00 3.16
2468 2541 8.623903 CCAACTGATAAGTATTATGTGTGCAAT 58.376 33.333 0.00 0.00 42.35 3.56
2487 2560 8.177119 ACTTTTTAACAATCATAGCCAACTGA 57.823 30.769 0.00 0.00 0.00 3.41
2498 2571 6.183360 CGTGTTGTGCAACTTTTTAACAATCA 60.183 34.615 14.97 0.00 41.67 2.57
2556 2629 6.989169 AGCTATACTTGAGTAAGGAATGCAAG 59.011 38.462 0.00 0.00 41.15 4.01
2557 2630 6.889198 AGCTATACTTGAGTAAGGAATGCAA 58.111 36.000 0.00 0.00 38.26 4.08
2558 2631 6.485830 AGCTATACTTGAGTAAGGAATGCA 57.514 37.500 0.00 0.00 38.26 3.96
2559 2632 7.810759 GTCTAGCTATACTTGAGTAAGGAATGC 59.189 40.741 2.14 0.00 38.26 3.56
2560 2633 8.018520 CGTCTAGCTATACTTGAGTAAGGAATG 58.981 40.741 7.57 0.00 38.26 2.67
2561 2634 7.175293 CCGTCTAGCTATACTTGAGTAAGGAAT 59.825 40.741 7.57 0.00 38.26 3.01
2562 2635 6.485984 CCGTCTAGCTATACTTGAGTAAGGAA 59.514 42.308 7.57 0.00 38.26 3.36
2563 2636 5.996513 CCGTCTAGCTATACTTGAGTAAGGA 59.003 44.000 7.57 0.00 38.26 3.36
2564 2637 5.996513 TCCGTCTAGCTATACTTGAGTAAGG 59.003 44.000 7.57 0.00 38.26 2.69
2565 2638 6.346758 CGTCCGTCTAGCTATACTTGAGTAAG 60.347 46.154 7.57 0.00 39.86 2.34
2566 2639 5.464722 CGTCCGTCTAGCTATACTTGAGTAA 59.535 44.000 7.57 0.00 33.76 2.24
2567 2640 4.987285 CGTCCGTCTAGCTATACTTGAGTA 59.013 45.833 7.57 0.00 30.41 2.59
2568 2641 3.808726 CGTCCGTCTAGCTATACTTGAGT 59.191 47.826 7.57 0.00 30.41 3.41
2569 2642 4.056740 TCGTCCGTCTAGCTATACTTGAG 58.943 47.826 7.57 0.00 30.41 3.02
2570 2643 3.806521 GTCGTCCGTCTAGCTATACTTGA 59.193 47.826 7.57 1.97 0.00 3.02
2571 2644 3.558829 TGTCGTCCGTCTAGCTATACTTG 59.441 47.826 7.57 0.00 0.00 3.16
2572 2645 3.801698 TGTCGTCCGTCTAGCTATACTT 58.198 45.455 7.57 0.00 0.00 2.24
2573 2646 3.465742 TGTCGTCCGTCTAGCTATACT 57.534 47.619 7.57 0.00 0.00 2.12
2574 2647 4.745837 AATGTCGTCCGTCTAGCTATAC 57.254 45.455 0.00 0.00 0.00 1.47
2575 2648 7.201591 GCTTATAATGTCGTCCGTCTAGCTATA 60.202 40.741 0.00 0.00 0.00 1.31
2576 2649 6.403418 GCTTATAATGTCGTCCGTCTAGCTAT 60.403 42.308 0.00 0.00 0.00 2.97
2577 2650 5.106791 GCTTATAATGTCGTCCGTCTAGCTA 60.107 44.000 0.00 0.00 0.00 3.32
2578 2651 4.320348 GCTTATAATGTCGTCCGTCTAGCT 60.320 45.833 0.00 0.00 0.00 3.32
2579 2652 3.913163 GCTTATAATGTCGTCCGTCTAGC 59.087 47.826 0.00 0.00 0.00 3.42
2580 2653 5.359716 AGCTTATAATGTCGTCCGTCTAG 57.640 43.478 0.00 0.00 0.00 2.43
2581 2654 4.084171 CGAGCTTATAATGTCGTCCGTCTA 60.084 45.833 7.96 0.00 0.00 2.59
2582 2655 3.303857 CGAGCTTATAATGTCGTCCGTCT 60.304 47.826 7.96 0.00 0.00 4.18
2583 2656 2.971915 CGAGCTTATAATGTCGTCCGTC 59.028 50.000 7.96 0.00 0.00 4.79
2584 2657 2.615447 TCGAGCTTATAATGTCGTCCGT 59.385 45.455 13.41 0.00 34.07 4.69
2585 2658 3.263602 TCGAGCTTATAATGTCGTCCG 57.736 47.619 13.41 0.00 34.07 4.79
2586 2659 4.795268 TGATCGAGCTTATAATGTCGTCC 58.205 43.478 0.90 8.88 34.07 4.79
2587 2660 5.915758 AGTTGATCGAGCTTATAATGTCGTC 59.084 40.000 0.90 11.28 34.07 4.20
2588 2661 5.833082 AGTTGATCGAGCTTATAATGTCGT 58.167 37.500 0.90 4.82 34.07 4.34
2589 2662 8.454293 AATAGTTGATCGAGCTTATAATGTCG 57.546 34.615 0.90 9.34 0.00 4.35
2593 2666 9.360093 GCAGTAATAGTTGATCGAGCTTATAAT 57.640 33.333 0.90 0.00 0.00 1.28
2594 2667 8.357402 TGCAGTAATAGTTGATCGAGCTTATAA 58.643 33.333 0.90 0.00 0.00 0.98
2595 2668 7.882179 TGCAGTAATAGTTGATCGAGCTTATA 58.118 34.615 0.90 0.00 0.00 0.98
2596 2669 6.749139 TGCAGTAATAGTTGATCGAGCTTAT 58.251 36.000 0.90 0.00 0.00 1.73
2597 2670 6.039382 TCTGCAGTAATAGTTGATCGAGCTTA 59.961 38.462 14.67 0.00 0.00 3.09
2598 2671 5.011090 TGCAGTAATAGTTGATCGAGCTT 57.989 39.130 0.90 0.00 0.00 3.74
2599 2672 4.339530 TCTGCAGTAATAGTTGATCGAGCT 59.660 41.667 14.67 0.00 0.00 4.09
2600 2673 4.442733 GTCTGCAGTAATAGTTGATCGAGC 59.557 45.833 14.67 0.00 0.00 5.03
2601 2674 5.685068 CAGTCTGCAGTAATAGTTGATCGAG 59.315 44.000 14.67 0.00 0.00 4.04
2602 2675 5.357032 TCAGTCTGCAGTAATAGTTGATCGA 59.643 40.000 14.67 0.00 0.00 3.59
2603 2676 5.582550 TCAGTCTGCAGTAATAGTTGATCG 58.417 41.667 14.67 0.00 0.00 3.69
2604 2677 7.761704 TCTTTCAGTCTGCAGTAATAGTTGATC 59.238 37.037 14.67 0.00 0.00 2.92
2605 2678 7.547370 GTCTTTCAGTCTGCAGTAATAGTTGAT 59.453 37.037 14.67 0.00 0.00 2.57
2606 2679 6.868864 GTCTTTCAGTCTGCAGTAATAGTTGA 59.131 38.462 14.67 5.66 0.00 3.18
2607 2680 6.870965 AGTCTTTCAGTCTGCAGTAATAGTTG 59.129 38.462 14.67 3.45 0.00 3.16
2608 2681 6.870965 CAGTCTTTCAGTCTGCAGTAATAGTT 59.129 38.462 14.67 0.00 0.00 2.24
2609 2682 6.015010 ACAGTCTTTCAGTCTGCAGTAATAGT 60.015 38.462 14.67 0.00 35.29 2.12
2610 2683 6.309980 CACAGTCTTTCAGTCTGCAGTAATAG 59.690 42.308 14.67 5.43 35.29 1.73
2611 2684 6.159293 CACAGTCTTTCAGTCTGCAGTAATA 58.841 40.000 14.67 0.00 35.29 0.98
2612 2685 4.993584 CACAGTCTTTCAGTCTGCAGTAAT 59.006 41.667 14.67 0.00 35.29 1.89
2613 2686 4.371786 CACAGTCTTTCAGTCTGCAGTAA 58.628 43.478 14.67 1.64 35.29 2.24
2614 2687 3.243873 CCACAGTCTTTCAGTCTGCAGTA 60.244 47.826 14.67 0.00 35.29 2.74
2615 2688 2.484417 CCACAGTCTTTCAGTCTGCAGT 60.484 50.000 14.67 0.00 35.29 4.40
2616 2689 2.141517 CCACAGTCTTTCAGTCTGCAG 58.858 52.381 7.63 7.63 35.29 4.41
2617 2690 1.811558 GCCACAGTCTTTCAGTCTGCA 60.812 52.381 0.00 0.00 35.29 4.41
2618 2691 0.871057 GCCACAGTCTTTCAGTCTGC 59.129 55.000 0.00 0.00 35.29 4.26
2619 2692 1.869767 GTGCCACAGTCTTTCAGTCTG 59.130 52.381 0.00 0.00 37.39 3.51
2620 2693 1.539065 CGTGCCACAGTCTTTCAGTCT 60.539 52.381 0.00 0.00 0.00 3.24
2621 2694 0.861837 CGTGCCACAGTCTTTCAGTC 59.138 55.000 0.00 0.00 0.00 3.51
2622 2695 1.160329 GCGTGCCACAGTCTTTCAGT 61.160 55.000 0.00 0.00 0.00 3.41
2623 2696 1.159713 TGCGTGCCACAGTCTTTCAG 61.160 55.000 0.00 0.00 0.00 3.02
2624 2697 0.534877 ATGCGTGCCACAGTCTTTCA 60.535 50.000 0.00 0.00 0.00 2.69
2625 2698 0.110056 CATGCGTGCCACAGTCTTTC 60.110 55.000 0.00 0.00 0.00 2.62
2626 2699 0.534877 TCATGCGTGCCACAGTCTTT 60.535 50.000 0.00 0.00 0.00 2.52
2627 2700 0.952497 CTCATGCGTGCCACAGTCTT 60.952 55.000 0.00 0.00 0.00 3.01
2628 2701 1.375140 CTCATGCGTGCCACAGTCT 60.375 57.895 0.00 0.00 0.00 3.24
2629 2702 3.031964 GCTCATGCGTGCCACAGTC 62.032 63.158 0.00 0.00 0.00 3.51
2630 2703 3.052082 GCTCATGCGTGCCACAGT 61.052 61.111 0.00 0.00 0.00 3.55
2631 2704 2.404186 ATGCTCATGCGTGCCACAG 61.404 57.895 0.00 0.00 43.34 3.66
2632 2705 2.360225 ATGCTCATGCGTGCCACA 60.360 55.556 0.00 0.00 43.34 4.17
2638 2711 1.651240 GCAACTCCATGCTCATGCGT 61.651 55.000 4.40 1.67 43.06 5.24
2639 2712 1.063649 GCAACTCCATGCTCATGCG 59.936 57.895 4.40 1.11 43.06 4.73
2640 2713 0.179145 GTGCAACTCCATGCTCATGC 60.179 55.000 4.40 5.22 46.54 4.06
2641 2714 1.132453 CTGTGCAACTCCATGCTCATG 59.868 52.381 4.74 2.97 45.47 3.07
2642 2715 1.271762 ACTGTGCAACTCCATGCTCAT 60.272 47.619 4.74 0.00 45.47 2.90
2643 2716 0.109153 ACTGTGCAACTCCATGCTCA 59.891 50.000 0.00 2.66 46.54 4.26
2644 2717 0.801251 GACTGTGCAACTCCATGCTC 59.199 55.000 0.00 0.00 46.54 4.26
2645 2718 0.399454 AGACTGTGCAACTCCATGCT 59.601 50.000 0.00 0.00 46.54 3.79
2646 2719 0.801251 GAGACTGTGCAACTCCATGC 59.199 55.000 0.00 0.00 46.58 4.06
2647 2720 2.174363 TGAGACTGTGCAACTCCATG 57.826 50.000 0.00 0.00 38.04 3.66
2648 2721 2.676176 CGATGAGACTGTGCAACTCCAT 60.676 50.000 0.00 0.00 38.04 3.41
2649 2722 1.337167 CGATGAGACTGTGCAACTCCA 60.337 52.381 0.00 0.00 38.04 3.86
2650 2723 1.067565 TCGATGAGACTGTGCAACTCC 60.068 52.381 0.00 0.00 38.04 3.85
2651 2724 2.354109 TCGATGAGACTGTGCAACTC 57.646 50.000 0.00 0.00 38.04 3.01
2652 2725 4.662468 ATATCGATGAGACTGTGCAACT 57.338 40.909 8.54 0.00 38.04 3.16
2653 2726 5.524284 ACTATATCGATGAGACTGTGCAAC 58.476 41.667 8.54 0.00 37.35 4.17
2654 2727 5.763088 GACTATATCGATGAGACTGTGCAA 58.237 41.667 8.54 0.00 0.00 4.08
2655 2728 5.363979 GACTATATCGATGAGACTGTGCA 57.636 43.478 8.54 0.00 0.00 4.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.