Multiple sequence alignment - TraesCS7D01G192400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G192400 chr7D 100.000 5574 0 0 1 5574 148147050 148152623 0.000000e+00 10294.0
1 TraesCS7D01G192400 chr7D 95.708 466 16 4 3074 3538 482249209 482248747 0.000000e+00 747.0
2 TraesCS7D01G192400 chr7D 93.506 231 15 0 3533 3763 543095877 543095647 1.490000e-90 344.0
3 TraesCS7D01G192400 chr7D 78.112 498 78 19 5042 5536 148266596 148267065 2.540000e-73 287.0
4 TraesCS7D01G192400 chr7D 86.667 60 6 2 4655 4713 514070416 514070474 1.300000e-06 65.8
5 TraesCS7D01G192400 chr7D 96.970 33 0 1 575 606 449776561 449776593 3.000000e-03 54.7
6 TraesCS7D01G192400 chr7A 88.818 1261 93 22 1231 2470 149303312 149304545 0.000000e+00 1504.0
7 TraesCS7D01G192400 chr7A 91.168 668 48 9 3800 4463 149305015 149305675 0.000000e+00 896.0
8 TraesCS7D01G192400 chr7A 88.296 581 33 13 4459 5018 149305721 149306287 0.000000e+00 664.0
9 TraesCS7D01G192400 chr7A 89.791 382 35 1 5197 5574 149306293 149306674 2.330000e-133 486.0
10 TraesCS7D01G192400 chr7A 97.004 267 6 2 71 336 149301755 149302020 1.100000e-121 448.0
11 TraesCS7D01G192400 chr7A 86.930 329 24 10 918 1233 149302942 149303264 8.880000e-93 351.0
12 TraesCS7D01G192400 chr7A 83.213 417 32 9 2498 2893 149304613 149305012 1.150000e-91 348.0
13 TraesCS7D01G192400 chr7A 92.149 242 15 3 3537 3776 1483200 1483439 6.920000e-89 339.0
14 TraesCS7D01G192400 chr7A 79.268 492 76 15 5053 5536 149424812 149425285 2.510000e-83 320.0
15 TraesCS7D01G192400 chr7A 85.799 169 21 2 2899 3067 534325462 534325627 5.740000e-40 176.0
16 TraesCS7D01G192400 chr7A 90.909 55 4 1 515 569 149302210 149302263 7.750000e-09 73.1
17 TraesCS7D01G192400 chr7A 87.500 56 4 2 804 859 149302866 149302918 1.680000e-05 62.1
18 TraesCS7D01G192400 chr7A 94.872 39 0 1 576 612 533577719 533577681 6.030000e-05 60.2
19 TraesCS7D01G192400 chr7B 87.557 876 58 25 1249 2082 111313232 111314098 0.000000e+00 966.0
20 TraesCS7D01G192400 chr7B 84.607 890 89 21 3792 4636 111315032 111315918 0.000000e+00 841.0
21 TraesCS7D01G192400 chr7B 89.483 580 33 17 63 633 111312000 111312560 0.000000e+00 708.0
22 TraesCS7D01G192400 chr7B 89.809 314 21 9 628 935 111312601 111312909 5.230000e-105 392.0
23 TraesCS7D01G192400 chr7B 92.620 271 12 7 970 1232 111312911 111313181 3.150000e-102 383.0
24 TraesCS7D01G192400 chr7B 89.355 310 22 6 4716 5020 111315916 111316219 4.080000e-101 379.0
25 TraesCS7D01G192400 chr7B 78.024 496 82 15 5042 5536 111338665 111339134 2.540000e-73 287.0
26 TraesCS7D01G192400 chr7B 78.750 400 51 14 2312 2694 111314417 111314799 2.600000e-58 237.0
27 TraesCS7D01G192400 chr7B 84.646 254 21 10 2665 2913 111314799 111315039 2.600000e-58 237.0
28 TraesCS7D01G192400 chr7B 92.105 38 3 0 569 606 116498805 116498842 3.000000e-03 54.7
29 TraesCS7D01G192400 chr3D 96.360 467 17 0 3072 3538 483189953 483190419 0.000000e+00 769.0
30 TraesCS7D01G192400 chr3D 96.352 466 17 0 3073 3538 321938278 321938743 0.000000e+00 767.0
31 TraesCS7D01G192400 chr3D 94.318 88 5 0 1020 1107 132608056 132607969 9.740000e-28 135.0
32 TraesCS7D01G192400 chr3D 100.000 31 0 0 570 600 416944096 416944126 2.170000e-04 58.4
33 TraesCS7D01G192400 chr5D 96.344 465 17 0 3074 3538 450523550 450524014 0.000000e+00 765.0
34 TraesCS7D01G192400 chr5D 93.249 237 12 3 3537 3773 450524724 450524956 4.130000e-91 346.0
35 TraesCS7D01G192400 chr4D 96.352 466 16 1 3073 3538 1616628 1616164 0.000000e+00 765.0
36 TraesCS7D01G192400 chr4D 85.227 176 24 2 2893 3067 26205027 26204853 4.440000e-41 180.0
37 TraesCS7D01G192400 chr4D 86.164 159 20 1 2909 3067 509826418 509826574 2.670000e-38 171.0
38 TraesCS7D01G192400 chr4D 86.076 158 21 1 2911 3067 422937463 422937306 9.600000e-38 169.0
39 TraesCS7D01G192400 chr4D 100.000 31 0 0 572 602 37922993 37923023 2.170000e-04 58.4
40 TraesCS7D01G192400 chr1D 96.129 465 17 1 3074 3538 33262559 33263022 0.000000e+00 758.0
41 TraesCS7D01G192400 chr1D 95.522 469 20 1 3070 3538 435762370 435761903 0.000000e+00 749.0
42 TraesCS7D01G192400 chr1D 90.654 107 9 1 1021 1126 426404868 426404974 2.090000e-29 141.0
43 TraesCS7D01G192400 chr1D 100.000 33 0 0 574 606 486746278 486746310 1.680000e-05 62.1
44 TraesCS7D01G192400 chr1A 95.923 466 19 0 3073 3538 504105564 504105099 0.000000e+00 756.0
45 TraesCS7D01G192400 chr1A 94.318 88 5 0 1021 1108 521331968 521332055 9.740000e-28 135.0
46 TraesCS7D01G192400 chr1A 83.333 84 14 0 4635 4718 333919528 333919611 1.660000e-10 78.7
47 TraesCS7D01G192400 chr1A 86.000 50 6 1 4635 4683 566588941 566588990 1.000000e-02 52.8
48 TraesCS7D01G192400 chr1B 95.329 471 20 2 3069 3538 143090750 143090281 0.000000e+00 747.0
49 TraesCS7D01G192400 chr1B 94.068 236 12 2 3537 3772 502644827 502644594 1.910000e-94 357.0
50 TraesCS7D01G192400 chr1B 94.318 88 5 0 1021 1108 575923511 575923598 9.740000e-28 135.0
51 TraesCS7D01G192400 chr1B 92.683 41 1 2 572 611 643590034 643590073 2.170000e-04 58.4
52 TraesCS7D01G192400 chr6D 81.788 593 59 23 2911 3462 468868949 468868365 8.520000e-123 451.0
53 TraesCS7D01G192400 chr6D 94.783 115 6 0 993 1107 398178673 398178787 4.440000e-41 180.0
54 TraesCS7D01G192400 chr6D 85.393 89 12 1 4020 4108 398180691 398180778 2.140000e-14 91.6
55 TraesCS7D01G192400 chr4A 93.991 233 14 0 3537 3769 597316131 597315899 2.470000e-93 353.0
56 TraesCS7D01G192400 chr2D 93.991 233 12 2 3538 3770 605402128 605402358 8.880000e-93 351.0
57 TraesCS7D01G192400 chr2D 100.000 36 0 0 571 606 87746123 87746088 3.600000e-07 67.6
58 TraesCS7D01G192400 chr2D 80.000 90 16 2 4630 4718 83543629 83543717 1.300000e-06 65.8
59 TraesCS7D01G192400 chr2D 94.737 38 1 1 565 602 641069765 641069729 2.170000e-04 58.4
60 TraesCS7D01G192400 chrUn 94.323 229 10 1 3537 3765 269087247 269087472 1.150000e-91 348.0
61 TraesCS7D01G192400 chrUn 94.323 229 10 1 3537 3765 349584818 349585043 1.150000e-91 348.0
62 TraesCS7D01G192400 chrUn 94.323 229 10 1 3537 3765 376837900 376837675 1.150000e-91 348.0
63 TraesCS7D01G192400 chr3A 87.898 157 19 0 2911 3067 485686482 485686638 9.540000e-43 185.0
64 TraesCS7D01G192400 chr3A 87.898 157 19 0 2911 3067 660858366 660858522 9.540000e-43 185.0
65 TraesCS7D01G192400 chr3A 86.709 158 21 0 2910 3067 12912167 12912324 5.740000e-40 176.0
66 TraesCS7D01G192400 chr3A 97.059 34 1 0 573 606 514095776 514095809 2.170000e-04 58.4
67 TraesCS7D01G192400 chr6A 96.429 112 3 1 997 1107 544174160 544174271 3.430000e-42 183.0
68 TraesCS7D01G192400 chr6A 82.540 126 18 4 4020 4143 544176529 544176652 2.120000e-19 108.0
69 TraesCS7D01G192400 chr6B 86.624 157 21 0 2911 3067 77396078 77395922 2.060000e-39 174.0
70 TraesCS7D01G192400 chr6B 96.667 90 3 0 1000 1089 595226678 595226767 3.480000e-32 150.0
71 TraesCS7D01G192400 chr6B 81.618 136 20 5 4020 4152 595229147 595229280 2.120000e-19 108.0
72 TraesCS7D01G192400 chr5B 87.500 80 9 1 4634 4712 22817674 22817753 2.140000e-14 91.6
73 TraesCS7D01G192400 chr3B 94.737 38 2 0 569 606 814550200 814550237 6.030000e-05 60.2
74 TraesCS7D01G192400 chr2B 97.143 35 1 0 572 606 50286158 50286192 6.030000e-05 60.2
75 TraesCS7D01G192400 chr2A 97.059 34 1 0 573 606 757639532 757639565 2.170000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G192400 chr7D 148147050 148152623 5573 False 10294.000000 10294 100.000000 1 5574 1 chr7D.!!$F1 5573
1 TraesCS7D01G192400 chr7A 149301755 149306674 4919 False 536.911111 1504 89.292111 71 5574 9 chr7A.!!$F4 5503
2 TraesCS7D01G192400 chr7B 111312000 111316219 4219 False 517.875000 966 87.103375 63 5020 8 chr7B.!!$F3 4957
3 TraesCS7D01G192400 chr5D 450523550 450524956 1406 False 555.500000 765 94.796500 3074 3773 2 chr5D.!!$F1 699
4 TraesCS7D01G192400 chr6D 468868365 468868949 584 True 451.000000 451 81.788000 2911 3462 1 chr6D.!!$R1 551

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
96 97 0.030235 TTCGACGGTGTGACTGACAG 59.970 55.0 0.00 0.00 34.28 3.51 F
505 514 0.247301 GCACGTCGCAGCTGTTTATC 60.247 55.0 16.64 0.00 41.79 1.75 F
509 518 0.299003 GTCGCAGCTGTTTATCGAGC 59.701 55.0 16.64 6.55 35.28 5.03 F
1379 1974 0.237235 TGTTCGACAATTTCAGCGCC 59.763 50.0 2.29 0.00 0.00 6.53 F
1435 2030 0.321122 CTCTGGGACACTGCAGGTTC 60.321 60.0 19.93 13.24 0.00 3.62 F
2186 2908 0.329596 AATCAGTGGCCCAGAAGACC 59.670 55.0 0.00 0.00 0.00 3.85 F
3129 3996 0.676184 ATCTGAGCGATGCATACGGT 59.324 50.0 18.50 18.50 43.87 4.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1316 1908 0.396974 AGGCCCAGCACAAACAGAAA 60.397 50.0 0.00 0.00 0.00 2.52 R
1319 1911 0.465287 AAAAGGCCCAGCACAAACAG 59.535 50.0 0.00 0.00 0.00 3.16 R
1553 2179 0.528924 TCCACACGATAAGACCACGG 59.471 55.0 0.00 0.00 0.00 4.94 R
3115 3982 0.175760 AAGTGACCGTATGCATCGCT 59.824 50.0 0.19 0.00 34.72 4.93 R
3180 4047 1.152383 GCTTAGACGGCGGCTTTAGG 61.152 60.0 25.39 5.15 0.00 2.69 R
3688 5302 0.036875 CGCCTCCTTCCCTTCTTGTT 59.963 55.0 0.00 0.00 0.00 2.83 R
5089 6807 0.598942 TGGACATGTGGAACGACGTG 60.599 55.0 1.15 7.43 42.39 4.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.423844 AAAAAGTCTCAATTTTCACCCTTCT 57.576 32.000 0.00 0.00 0.00 2.85
25 26 6.641169 AAAGTCTCAATTTTCACCCTTCTC 57.359 37.500 0.00 0.00 0.00 2.87
26 27 4.657013 AGTCTCAATTTTCACCCTTCTCC 58.343 43.478 0.00 0.00 0.00 3.71
27 28 3.759086 GTCTCAATTTTCACCCTTCTCCC 59.241 47.826 0.00 0.00 0.00 4.30
28 29 3.092301 CTCAATTTTCACCCTTCTCCCC 58.908 50.000 0.00 0.00 0.00 4.81
29 30 2.448961 TCAATTTTCACCCTTCTCCCCA 59.551 45.455 0.00 0.00 0.00 4.96
30 31 2.827921 CAATTTTCACCCTTCTCCCCAG 59.172 50.000 0.00 0.00 0.00 4.45
31 32 0.112412 TTTTCACCCTTCTCCCCAGC 59.888 55.000 0.00 0.00 0.00 4.85
32 33 1.065410 TTTCACCCTTCTCCCCAGCA 61.065 55.000 0.00 0.00 0.00 4.41
33 34 1.492133 TTCACCCTTCTCCCCAGCAG 61.492 60.000 0.00 0.00 0.00 4.24
34 35 2.612115 ACCCTTCTCCCCAGCAGG 60.612 66.667 0.00 0.00 32.96 4.85
35 36 2.285668 CCCTTCTCCCCAGCAGGA 60.286 66.667 0.00 0.00 35.09 3.86
40 41 4.463879 CTCCCCAGCAGGAGCGTG 62.464 72.222 0.00 0.00 46.76 5.34
48 49 3.516578 GCAGGAGCGTGTAGAAACT 57.483 52.632 0.00 0.00 0.00 2.66
49 50 1.797025 GCAGGAGCGTGTAGAAACTT 58.203 50.000 0.00 0.00 0.00 2.66
50 51 2.143925 GCAGGAGCGTGTAGAAACTTT 58.856 47.619 0.00 0.00 0.00 2.66
51 52 2.548480 GCAGGAGCGTGTAGAAACTTTT 59.452 45.455 0.00 0.00 0.00 2.27
52 53 3.607078 GCAGGAGCGTGTAGAAACTTTTG 60.607 47.826 0.00 0.00 0.00 2.44
53 54 3.560068 CAGGAGCGTGTAGAAACTTTTGT 59.440 43.478 0.00 0.00 0.00 2.83
54 55 4.035208 CAGGAGCGTGTAGAAACTTTTGTT 59.965 41.667 0.00 0.00 45.94 2.83
55 56 4.272748 AGGAGCGTGTAGAAACTTTTGTTC 59.727 41.667 0.00 0.00 42.67 3.18
56 57 4.524749 GAGCGTGTAGAAACTTTTGTTCC 58.475 43.478 0.00 0.00 42.67 3.62
57 58 3.314357 AGCGTGTAGAAACTTTTGTTCCC 59.686 43.478 0.00 0.00 42.67 3.97
58 59 3.847105 GCGTGTAGAAACTTTTGTTCCCG 60.847 47.826 0.00 0.00 42.67 5.14
59 60 3.556775 CGTGTAGAAACTTTTGTTCCCGA 59.443 43.478 0.00 0.00 42.67 5.14
60 61 4.551410 CGTGTAGAAACTTTTGTTCCCGAC 60.551 45.833 0.00 0.00 42.67 4.79
61 62 4.333372 GTGTAGAAACTTTTGTTCCCGACA 59.667 41.667 0.00 0.00 42.67 4.35
69 70 3.328382 TTTGTTCCCGACACAGGATAG 57.672 47.619 0.00 0.00 38.18 2.08
96 97 0.030235 TTCGACGGTGTGACTGACAG 59.970 55.000 0.00 0.00 34.28 3.51
97 98 1.371758 CGACGGTGTGACTGACAGG 60.372 63.158 7.51 0.00 34.28 4.00
98 99 1.740285 GACGGTGTGACTGACAGGT 59.260 57.895 7.51 0.00 34.28 4.00
333 338 3.775654 GGAGCTACGTGCAGCCCT 61.776 66.667 6.70 0.00 45.94 5.19
393 401 1.596954 GCAACACATCGACAACACACC 60.597 52.381 0.00 0.00 0.00 4.16
430 438 6.236409 ACATCTATCTATGGTTGGATTGCAG 58.764 40.000 0.00 0.00 0.00 4.41
456 465 1.959042 CCCAACCATCAAGATCTCCG 58.041 55.000 0.00 0.00 0.00 4.63
460 469 0.692419 ACCATCAAGATCTCCGGGCT 60.692 55.000 0.00 0.00 0.00 5.19
462 471 0.755079 CATCAAGATCTCCGGGCTGA 59.245 55.000 0.00 0.00 0.00 4.26
470 479 2.691409 TCTCCGGGCTGAGTTTATTG 57.309 50.000 0.00 0.00 33.93 1.90
505 514 0.247301 GCACGTCGCAGCTGTTTATC 60.247 55.000 16.64 0.00 41.79 1.75
509 518 0.299003 GTCGCAGCTGTTTATCGAGC 59.701 55.000 16.64 6.55 35.28 5.03
529 538 7.039882 TCGAGCCAAAAATAAGTACTAAGAGG 58.960 38.462 0.00 0.00 0.00 3.69
586 637 3.957591 AGAAAAACTACTCCCTCCGTC 57.042 47.619 0.00 0.00 0.00 4.79
610 661 6.821482 CGCATAATATAAGAGCGTTTGACAT 58.179 36.000 0.00 0.00 43.08 3.06
612 663 7.266966 CGCATAATATAAGAGCGTTTGACATTG 59.733 37.037 0.00 0.00 43.08 2.82
615 666 7.624360 AATATAAGAGCGTTTGACATTGGAA 57.376 32.000 0.00 0.00 0.00 3.53
661 759 9.140286 ACGACTCATAATCAATTACATAATCCG 57.860 33.333 0.00 0.00 0.00 4.18
667 765 9.140286 CATAATCAATTACATAATCCGACTCGT 57.860 33.333 0.00 0.00 0.00 4.18
720 867 1.449246 GAAGCAGAGCACGGCATCT 60.449 57.895 9.09 0.00 39.53 2.90
784 1305 0.321671 AAGGATGTGACGGTGACCTG 59.678 55.000 0.00 0.00 0.00 4.00
786 1307 1.293498 GATGTGACGGTGACCTGCT 59.707 57.895 0.00 0.00 0.00 4.24
787 1308 0.737715 GATGTGACGGTGACCTGCTC 60.738 60.000 0.00 0.00 0.00 4.26
788 1309 2.048127 GTGACGGTGACCTGCTCC 60.048 66.667 0.00 0.00 0.00 4.70
789 1310 3.311110 TGACGGTGACCTGCTCCC 61.311 66.667 0.00 0.00 0.00 4.30
790 1311 2.997897 GACGGTGACCTGCTCCCT 60.998 66.667 0.00 0.00 0.00 4.20
791 1312 2.526873 ACGGTGACCTGCTCCCTT 60.527 61.111 0.00 0.00 0.00 3.95
792 1313 2.266055 CGGTGACCTGCTCCCTTC 59.734 66.667 0.00 0.00 0.00 3.46
793 1314 2.266055 GGTGACCTGCTCCCTTCG 59.734 66.667 0.00 0.00 0.00 3.79
794 1315 2.435059 GTGACCTGCTCCCTTCGC 60.435 66.667 0.00 0.00 0.00 4.70
795 1316 3.706373 TGACCTGCTCCCTTCGCC 61.706 66.667 0.00 0.00 0.00 5.54
796 1317 3.394836 GACCTGCTCCCTTCGCCT 61.395 66.667 0.00 0.00 0.00 5.52
797 1318 3.378399 GACCTGCTCCCTTCGCCTC 62.378 68.421 0.00 0.00 0.00 4.70
798 1319 3.080121 CCTGCTCCCTTCGCCTCT 61.080 66.667 0.00 0.00 0.00 3.69
799 1320 2.498726 CTGCTCCCTTCGCCTCTC 59.501 66.667 0.00 0.00 0.00 3.20
800 1321 3.077556 TGCTCCCTTCGCCTCTCC 61.078 66.667 0.00 0.00 0.00 3.71
801 1322 3.855853 GCTCCCTTCGCCTCTCCC 61.856 72.222 0.00 0.00 0.00 4.30
802 1323 2.042435 CTCCCTTCGCCTCTCCCT 60.042 66.667 0.00 0.00 0.00 4.20
810 1331 0.395036 TCGCCTCTCCCTCTCTTCAG 60.395 60.000 0.00 0.00 0.00 3.02
863 1384 1.213094 ACGCACAACCGAAGAACGAG 61.213 55.000 0.00 0.00 45.77 4.18
865 1386 1.487231 CACAACCGAAGAACGAGCG 59.513 57.895 0.00 0.00 45.77 5.03
882 1404 1.964373 CGAACCAACCAACCCCTCG 60.964 63.158 0.00 0.00 0.00 4.63
902 1424 2.096516 CGCTCACTGAAACTTCTCAAGC 60.097 50.000 0.00 0.00 0.00 4.01
935 1463 1.518133 CTCGCTCTGCCACTGCTAC 60.518 63.158 0.00 0.00 38.71 3.58
936 1464 1.943116 CTCGCTCTGCCACTGCTACT 61.943 60.000 0.00 0.00 38.71 2.57
937 1465 1.808799 CGCTCTGCCACTGCTACTG 60.809 63.158 0.00 0.00 38.71 2.74
938 1466 2.105466 GCTCTGCCACTGCTACTGC 61.105 63.158 0.00 0.00 38.71 4.40
939 1467 1.595882 CTCTGCCACTGCTACTGCT 59.404 57.895 0.00 0.00 40.48 4.24
940 1468 0.820226 CTCTGCCACTGCTACTGCTA 59.180 55.000 0.00 0.00 40.48 3.49
941 1469 0.820226 TCTGCCACTGCTACTGCTAG 59.180 55.000 0.00 0.00 40.48 3.42
942 1470 0.809241 CTGCCACTGCTACTGCTAGC 60.809 60.000 8.10 8.10 45.19 3.42
943 1471 1.260538 TGCCACTGCTACTGCTAGCT 61.261 55.000 17.23 0.00 45.20 3.32
944 1472 0.747255 GCCACTGCTACTGCTAGCTA 59.253 55.000 17.23 0.00 45.20 3.32
945 1473 1.269517 GCCACTGCTACTGCTAGCTAG 60.270 57.143 16.84 16.84 45.20 3.42
946 1474 1.339610 CCACTGCTACTGCTAGCTAGG 59.660 57.143 22.10 9.03 45.20 3.02
947 1475 1.036707 ACTGCTACTGCTAGCTAGGC 58.963 55.000 22.10 15.97 45.20 3.93
948 1476 0.316841 CTGCTACTGCTAGCTAGGCC 59.683 60.000 22.10 7.13 45.20 5.19
949 1477 1.287503 GCTACTGCTAGCTAGGCCG 59.712 63.158 22.10 12.62 42.11 6.13
950 1478 1.287503 CTACTGCTAGCTAGGCCGC 59.712 63.158 22.10 9.23 0.00 6.53
951 1479 1.152735 TACTGCTAGCTAGGCCGCT 60.153 57.895 22.10 10.20 43.83 5.52
952 1480 1.456196 TACTGCTAGCTAGGCCGCTG 61.456 60.000 22.10 14.08 41.12 5.18
953 1481 4.227134 TGCTAGCTAGGCCGCTGC 62.227 66.667 22.10 15.00 41.12 5.25
1122 1650 2.978946 CGTAATGCCCACACCCCCT 61.979 63.158 0.00 0.00 0.00 4.79
1124 1652 2.313427 TAATGCCCACACCCCCTCC 61.313 63.158 0.00 0.00 0.00 4.30
1125 1653 2.798760 TAATGCCCACACCCCCTCCT 62.799 60.000 0.00 0.00 0.00 3.69
1130 1665 1.704082 CCACACCCCCTCCTCTCTA 59.296 63.158 0.00 0.00 0.00 2.43
1132 1667 1.344496 CCACACCCCCTCCTCTCTATT 60.344 57.143 0.00 0.00 0.00 1.73
1139 1674 3.783082 CCCCCTCCTCTCTATTTGTCTTT 59.217 47.826 0.00 0.00 0.00 2.52
1143 1678 4.226168 CCTCCTCTCTATTTGTCTTTGGGT 59.774 45.833 0.00 0.00 0.00 4.51
1178 1714 1.071699 TCTCTTGGGTTCCAGGAAACG 59.928 52.381 11.36 0.00 39.11 3.60
1212 1754 3.223226 CCCCCATTTGCATCCTGC 58.777 61.111 0.00 0.00 45.29 4.85
1222 1764 3.056313 GCATCCTGCTCCGGTTTGC 62.056 63.158 0.00 5.58 40.96 3.68
1235 1827 1.859080 CGGTTTGCTAGATTCGCCTAC 59.141 52.381 0.00 0.00 0.00 3.18
1269 1861 9.767684 TGTATACAATTTTGAAATCGTTGCTAG 57.232 29.630 2.20 0.00 0.00 3.42
1298 1890 6.216569 TCACATCCGAGAGTAAATATTCTGC 58.783 40.000 0.00 0.00 0.00 4.26
1307 1899 7.466050 CGAGAGTAAATATTCTGCCAGGTTTTC 60.466 40.741 0.00 0.00 0.00 2.29
1314 1906 2.306847 TCTGCCAGGTTTTCAACTTCC 58.693 47.619 0.00 0.00 0.00 3.46
1315 1907 2.091885 TCTGCCAGGTTTTCAACTTCCT 60.092 45.455 0.00 0.00 0.00 3.36
1316 1908 2.695147 CTGCCAGGTTTTCAACTTCCTT 59.305 45.455 0.00 0.00 0.00 3.36
1319 1911 4.119862 GCCAGGTTTTCAACTTCCTTTTC 58.880 43.478 0.00 0.00 0.00 2.29
1322 1914 5.105351 CCAGGTTTTCAACTTCCTTTTCTGT 60.105 40.000 0.00 0.00 0.00 3.41
1379 1974 0.237235 TGTTCGACAATTTCAGCGCC 59.763 50.000 2.29 0.00 0.00 6.53
1435 2030 0.321122 CTCTGGGACACTGCAGGTTC 60.321 60.000 19.93 13.24 0.00 3.62
1468 2091 0.527385 GCTGCCTGTTTTGTTTCGCA 60.527 50.000 0.00 0.00 0.00 5.10
1533 2159 7.703058 ATTATTACACCACTCTTTCTTTGGG 57.297 36.000 0.00 0.00 34.41 4.12
1553 2179 2.620585 GGAGCTGCCACAGGATTTTATC 59.379 50.000 0.00 0.00 36.34 1.75
1554 2180 4.555778 GGAGCTGCCACAGGATTTTATCC 61.556 52.174 0.00 0.00 42.65 2.59
1729 2358 8.710551 CGTATCTATTCTACACCACTACTAGTG 58.289 40.741 5.39 9.02 45.53 2.74
1793 2428 3.006659 TGGTTTTTATCGTGTGCTTGC 57.993 42.857 0.00 0.00 0.00 4.01
1800 2435 7.410407 GGTTTTTATCGTGTGCTTGCTTATTTC 60.410 37.037 0.00 0.00 0.00 2.17
1886 2521 5.452078 ACAAAATATGGTGAGTTGTGTGG 57.548 39.130 0.00 0.00 31.45 4.17
1896 2534 0.546122 AGTTGTGTGGCTGTCAAGGA 59.454 50.000 0.00 0.00 0.00 3.36
1898 2536 1.334869 GTTGTGTGGCTGTCAAGGAAG 59.665 52.381 0.00 0.00 0.00 3.46
2015 2661 6.377996 TCATTGTTGGAAATACTATGCTTGCT 59.622 34.615 0.00 0.00 31.62 3.91
2028 2674 1.000060 TGCTTGCTTTCCTTGTGATGC 60.000 47.619 0.00 0.00 0.00 3.91
2032 2678 2.867624 TGCTTTCCTTGTGATGCTTCT 58.132 42.857 0.88 0.00 0.00 2.85
2040 2686 3.686726 CCTTGTGATGCTTCTTGGACTAC 59.313 47.826 0.88 0.00 0.00 2.73
2041 2687 4.564406 CCTTGTGATGCTTCTTGGACTACT 60.564 45.833 0.88 0.00 0.00 2.57
2046 2692 4.223700 TGATGCTTCTTGGACTACTGTCAT 59.776 41.667 0.88 0.00 44.61 3.06
2051 2697 6.127703 TGCTTCTTGGACTACTGTCATACTAC 60.128 42.308 0.00 0.00 44.61 2.73
2133 2855 1.461897 GTGCATGTTTGGAGCAAATGC 59.538 47.619 0.00 0.00 38.81 3.56
2138 2860 5.163437 TGCATGTTTGGAGCAAATGCATATA 60.163 36.000 8.28 0.00 41.36 0.86
2139 2861 5.929992 GCATGTTTGGAGCAAATGCATATAT 59.070 36.000 8.28 0.00 45.16 0.86
2140 2862 7.092079 GCATGTTTGGAGCAAATGCATATATA 58.908 34.615 8.28 0.00 45.16 0.86
2145 2867 9.573133 GTTTGGAGCAAATGCATATATATTACC 57.427 33.333 8.28 0.00 45.16 2.85
2160 2882 3.764237 ATTACCCAGTTCGTTGTCAGT 57.236 42.857 0.00 0.00 0.00 3.41
2165 2887 2.483013 CCCAGTTCGTTGTCAGTCTCAA 60.483 50.000 0.00 0.00 0.00 3.02
2186 2908 0.329596 AATCAGTGGCCCAGAAGACC 59.670 55.000 0.00 0.00 0.00 3.85
2241 2964 3.624777 GGATTGCTTTCTCCTTCCATCA 58.375 45.455 0.00 0.00 0.00 3.07
2247 2970 3.438434 GCTTTCTCCTTCCATCACACTTC 59.562 47.826 0.00 0.00 0.00 3.01
2256 2979 1.358877 CATCACACTTCGCGAATGGA 58.641 50.000 23.67 16.73 0.00 3.41
2271 2994 4.095610 CGAATGGATTGGCGTAAGAAAAC 58.904 43.478 0.00 0.00 43.02 2.43
2279 3047 7.132863 GGATTGGCGTAAGAAAACATCTATTC 58.867 38.462 0.00 0.00 37.42 1.75
2285 3053 8.398665 GGCGTAAGAAAACATCTATTCTTTCAT 58.601 33.333 6.13 0.00 41.79 2.57
2351 3122 5.010282 AGGATTACACGAAGCAAGGAAAAT 58.990 37.500 0.00 0.00 0.00 1.82
2404 3175 4.860907 CCTGCCGAGATTTTGAAAATCTTG 59.139 41.667 28.84 28.84 37.14 3.02
2411 3182 6.810182 CGAGATTTTGAAAATCTTGGAATGCT 59.190 34.615 28.42 10.29 37.14 3.79
2413 3184 6.877322 AGATTTTGAAAATCTTGGAATGCTGG 59.123 34.615 23.49 0.00 33.47 4.85
2415 3186 2.094597 TGAAAATCTTGGAATGCTGGCG 60.095 45.455 0.00 0.00 0.00 5.69
2462 3233 5.844004 AGCAACTTCAGAATATACTACCCG 58.156 41.667 0.00 0.00 0.00 5.28
2463 3234 5.363005 AGCAACTTCAGAATATACTACCCGT 59.637 40.000 0.00 0.00 0.00 5.28
2474 3265 7.607223 AGAATATACTACCCGTATGAGTCTCAC 59.393 40.741 4.21 0.00 39.15 3.51
2518 3329 4.431416 TTTCCATATATGCCCGTCAAGT 57.569 40.909 7.24 0.00 0.00 3.16
2636 3448 7.269937 CGTTTCTGCAAATACTGATCTTTCTTG 59.730 37.037 0.00 0.00 0.00 3.02
2637 3449 6.187125 TCTGCAAATACTGATCTTTCTTGC 57.813 37.500 10.96 10.96 38.48 4.01
2639 3451 5.702865 TGCAAATACTGATCTTTCTTGCAC 58.297 37.500 14.52 0.00 41.82 4.57
2640 3452 5.241285 TGCAAATACTGATCTTTCTTGCACA 59.759 36.000 14.52 0.00 41.82 4.57
2642 3454 5.557891 AATACTGATCTTTCTTGCACAGC 57.442 39.130 0.00 0.00 0.00 4.40
2656 3468 5.611796 TTGCACAGCAAACTATACAGAAG 57.388 39.130 1.36 0.00 45.96 2.85
2658 3470 3.181506 GCACAGCAAACTATACAGAAGCC 60.182 47.826 0.00 0.00 0.00 4.35
2717 3578 9.369904 CATATATTGCAAGCCTTTTAGTTTTGT 57.630 29.630 4.94 0.00 0.00 2.83
2726 3587 7.158099 AGCCTTTTAGTTTTGTCCATCATAC 57.842 36.000 0.00 0.00 0.00 2.39
2742 3603 9.421806 GTCCATCATACAATTTTTGTCAATCAA 57.578 29.630 0.00 0.00 44.12 2.57
2790 3651 5.465390 TCTCCGTGAAGACAAACAATACTTG 59.535 40.000 0.00 0.00 0.00 3.16
2808 3669 1.675641 GCTTGACCATCCTGGCGTT 60.676 57.895 0.00 0.00 42.67 4.84
2878 3743 2.557056 GGTTACCTGAAGGCTGGAAAAC 59.443 50.000 0.00 1.20 39.32 2.43
2882 3747 1.266989 CCTGAAGGCTGGAAAACGTTC 59.733 52.381 0.00 0.00 35.28 3.95
2899 3764 2.034558 CGTTCACAGTTGGCCTTTGATT 59.965 45.455 3.32 0.00 30.22 2.57
2906 3771 4.590222 ACAGTTGGCCTTTGATTTCTTCAT 59.410 37.500 3.32 0.00 33.34 2.57
2919 3784 8.789767 TTGATTTCTTCATATCTACTCCCTCT 57.210 34.615 0.00 0.00 33.34 3.69
2925 3790 5.671463 TCATATCTACTCCCTCTGTTCCT 57.329 43.478 0.00 0.00 0.00 3.36
2931 3796 7.842887 ATCTACTCCCTCTGTTCCTAAATAC 57.157 40.000 0.00 0.00 0.00 1.89
2935 3800 5.785940 ACTCCCTCTGTTCCTAAATACAAGT 59.214 40.000 0.00 0.00 0.00 3.16
2936 3801 6.070710 ACTCCCTCTGTTCCTAAATACAAGTC 60.071 42.308 0.00 0.00 0.00 3.01
2937 3802 6.023603 TCCCTCTGTTCCTAAATACAAGTCT 58.976 40.000 0.00 0.00 0.00 3.24
2967 3834 4.587262 AGATGCCAATACGGACTACATACA 59.413 41.667 0.00 0.00 36.56 2.29
2977 3844 8.951787 ATACGGACTACATACAAAGCAAAATA 57.048 30.769 0.00 0.00 0.00 1.40
2979 3846 8.101654 ACGGACTACATACAAAGCAAAATAAA 57.898 30.769 0.00 0.00 0.00 1.40
3036 3903 8.499162 CATCCGAATGTAGTCCTTATTGAAATC 58.501 37.037 0.00 0.00 0.00 2.17
3040 3907 9.967346 CGAATGTAGTCCTTATTGAAATCTCTA 57.033 33.333 0.00 0.00 0.00 2.43
3068 3935 9.543783 AATGACTTATATTTAGAAACGGAGGAC 57.456 33.333 0.00 0.00 0.00 3.85
3069 3936 8.302515 TGACTTATATTTAGAAACGGAGGACT 57.697 34.615 0.00 0.00 0.00 3.85
3070 3937 9.412460 TGACTTATATTTAGAAACGGAGGACTA 57.588 33.333 0.00 0.00 0.00 2.59
3071 3938 9.676195 GACTTATATTTAGAAACGGAGGACTAC 57.324 37.037 0.00 0.00 0.00 2.73
3072 3939 9.193806 ACTTATATTTAGAAACGGAGGACTACA 57.806 33.333 0.00 0.00 0.00 2.74
3115 3982 3.473647 CCCGGCCTCTGCATCTGA 61.474 66.667 0.00 0.00 40.13 3.27
3129 3996 0.676184 ATCTGAGCGATGCATACGGT 59.324 50.000 18.50 18.50 43.87 4.83
3180 4047 8.996271 ACCTTACAAAGTAATACAACAGTAAGC 58.004 33.333 14.07 0.00 37.13 3.09
3322 4203 3.151710 TGCCGGGTATGGGTCTCG 61.152 66.667 2.18 0.00 0.00 4.04
3382 4285 1.363744 CACCGCTCCATCTTCAGAAC 58.636 55.000 0.00 0.00 0.00 3.01
3466 4369 4.634703 TCCTCCCTGCGCGCAAAA 62.635 61.111 35.50 21.03 0.00 2.44
3497 4400 1.214325 CACGGTCGCCACTGATACA 59.786 57.895 0.00 0.00 32.54 2.29
3689 5303 4.388499 GGCGGCGAGGACAGGAAA 62.388 66.667 12.98 0.00 0.00 3.13
3690 5304 3.119096 GCGGCGAGGACAGGAAAC 61.119 66.667 12.98 0.00 0.00 2.78
3691 5305 2.342279 CGGCGAGGACAGGAAACA 59.658 61.111 0.00 0.00 0.00 2.83
3699 5313 2.372172 GAGGACAGGAAACAAGAAGGGA 59.628 50.000 0.00 0.00 0.00 4.20
3710 5324 1.554583 AAGAAGGGAAGGAGGCGGAC 61.555 60.000 0.00 0.00 0.00 4.79
3766 5380 4.493747 GACGCGAGGGAACGAGGG 62.494 72.222 15.93 0.00 37.39 4.30
3770 5384 3.148279 CGAGGGAACGAGGGGAGG 61.148 72.222 0.00 0.00 35.09 4.30
3771 5385 2.764547 GAGGGAACGAGGGGAGGG 60.765 72.222 0.00 0.00 0.00 4.30
3772 5386 3.281787 AGGGAACGAGGGGAGGGA 61.282 66.667 0.00 0.00 0.00 4.20
3773 5387 2.764547 GGGAACGAGGGGAGGGAG 60.765 72.222 0.00 0.00 0.00 4.30
3774 5388 2.764547 GGAACGAGGGGAGGGAGG 60.765 72.222 0.00 0.00 0.00 4.30
3775 5389 2.363361 GAACGAGGGGAGGGAGGA 59.637 66.667 0.00 0.00 0.00 3.71
3776 5390 1.758906 GAACGAGGGGAGGGAGGAG 60.759 68.421 0.00 0.00 0.00 3.69
3777 5391 2.517582 GAACGAGGGGAGGGAGGAGT 62.518 65.000 0.00 0.00 0.00 3.85
3778 5392 2.123640 CGAGGGGAGGGAGGAGTC 60.124 72.222 0.00 0.00 0.00 3.36
3779 5393 2.123640 GAGGGGAGGGAGGAGTCG 60.124 72.222 0.00 0.00 0.00 4.18
3780 5394 3.742248 GAGGGGAGGGAGGAGTCGG 62.742 73.684 0.00 0.00 0.00 4.79
3784 5398 4.779733 GAGGGAGGAGTCGGCCCA 62.780 72.222 18.17 0.00 44.55 5.36
3785 5399 4.332543 AGGGAGGAGTCGGCCCAA 62.333 66.667 18.17 0.00 44.55 4.12
3786 5400 3.787001 GGGAGGAGTCGGCCCAAG 61.787 72.222 12.71 0.00 41.64 3.61
3787 5401 3.003763 GGAGGAGTCGGCCCAAGT 61.004 66.667 0.00 0.00 0.00 3.16
3788 5402 2.266055 GAGGAGTCGGCCCAAGTG 59.734 66.667 0.00 0.00 0.00 3.16
3789 5403 2.526873 AGGAGTCGGCCCAAGTGT 60.527 61.111 0.00 0.00 0.00 3.55
3790 5404 2.358737 GGAGTCGGCCCAAGTGTG 60.359 66.667 0.00 0.00 0.00 3.82
3791 5405 2.741092 GAGTCGGCCCAAGTGTGA 59.259 61.111 0.00 0.00 0.00 3.58
3792 5406 1.070786 GAGTCGGCCCAAGTGTGAA 59.929 57.895 0.00 0.00 0.00 3.18
3793 5407 0.534203 GAGTCGGCCCAAGTGTGAAA 60.534 55.000 0.00 0.00 0.00 2.69
3794 5408 0.110486 AGTCGGCCCAAGTGTGAAAT 59.890 50.000 0.00 0.00 0.00 2.17
3795 5409 0.521735 GTCGGCCCAAGTGTGAAATC 59.478 55.000 0.00 0.00 0.00 2.17
3796 5410 0.400213 TCGGCCCAAGTGTGAAATCT 59.600 50.000 0.00 0.00 0.00 2.40
3797 5411 0.804989 CGGCCCAAGTGTGAAATCTC 59.195 55.000 0.00 0.00 0.00 2.75
3798 5412 1.881925 CGGCCCAAGTGTGAAATCTCA 60.882 52.381 0.00 0.00 0.00 3.27
3802 5416 4.646492 GGCCCAAGTGTGAAATCTCATATT 59.354 41.667 0.00 0.00 33.05 1.28
3888 5502 0.250901 AGGAACTCCGCAAGCACATT 60.251 50.000 0.00 0.00 42.08 2.71
3900 5514 2.431260 CACATTGGCGCAACCTGC 60.431 61.111 10.83 0.00 40.22 4.85
3951 5565 5.600696 CAGGTTAATTTCTTGTGTTGGCTT 58.399 37.500 0.00 0.00 0.00 4.35
3997 5620 6.371809 TGTTATATTTTCGGTGCATCCTTC 57.628 37.500 0.00 0.00 0.00 3.46
4005 5628 2.429250 TCGGTGCATCCTTCGAATTCTA 59.571 45.455 0.00 0.00 0.00 2.10
4010 5633 6.223852 GGTGCATCCTTCGAATTCTAGATTA 58.776 40.000 0.00 0.00 0.00 1.75
4015 5638 9.604626 GCATCCTTCGAATTCTAGATTAAATTG 57.395 33.333 0.00 0.00 0.00 2.32
4161 5784 2.345876 ACTTTGCTGTTGTTGTTTGCC 58.654 42.857 0.00 0.00 0.00 4.52
4166 5789 0.179113 CTGTTGTTGTTTGCCCGCTT 60.179 50.000 0.00 0.00 0.00 4.68
4328 5959 5.971763 TCACTTTTTAGGTTGTGCATGTTT 58.028 33.333 0.00 0.00 0.00 2.83
4332 5963 6.097696 ACTTTTTAGGTTGTGCATGTTTACCT 59.902 34.615 13.07 13.07 41.80 3.08
4348 5979 4.875561 TTACCTGCCATTTGGTAAAACC 57.124 40.909 0.00 0.00 43.37 3.27
4403 6034 6.716934 TGAGTTCATAGAATAGACCACTCC 57.283 41.667 0.00 0.00 30.38 3.85
4428 6059 7.868415 CCTGAATGTCTAGTAAAGCCATAGTAC 59.132 40.741 0.00 0.00 0.00 2.73
4448 6079 1.905215 CTGGACTCTGAACTCCCATGT 59.095 52.381 0.00 0.00 0.00 3.21
4618 6307 2.223805 GGGAATTATTTGAGCAAGGCGG 60.224 50.000 0.00 0.00 0.00 6.13
4651 6340 5.742255 GCTTGTGTACTCCCTCTGTAAACTT 60.742 44.000 0.00 0.00 31.35 2.66
4697 6387 4.229876 AGTAGTGTCGTAAAACGCCTTAC 58.770 43.478 0.00 0.00 42.21 2.34
4698 6388 3.096489 AGTGTCGTAAAACGCCTTACA 57.904 42.857 7.71 0.00 42.21 2.41
4714 6404 5.697633 CGCCTTACAAAAGTTTACAGAGGTA 59.302 40.000 8.77 0.00 0.00 3.08
4788 6481 5.811399 TTTGTAATCGGCCAATCAACTAG 57.189 39.130 2.24 0.00 0.00 2.57
4832 6530 6.586082 GTCCATTGGTGCTTGTAACAAATTAG 59.414 38.462 1.86 0.00 0.00 1.73
4872 6570 0.179034 GAGCAATGCCGGGATCTTCT 60.179 55.000 9.66 6.59 0.00 2.85
4877 6578 1.668419 ATGCCGGGATCTTCTTTTCG 58.332 50.000 0.92 0.00 0.00 3.46
4878 6579 1.024579 TGCCGGGATCTTCTTTTCGC 61.025 55.000 2.18 0.00 0.00 4.70
4888 6589 5.124617 GGATCTTCTTTTCGCTCCAAAAGAT 59.875 40.000 12.99 5.02 46.74 2.40
4890 6591 7.148239 GGATCTTCTTTTCGCTCCAAAAGATTA 60.148 37.037 12.99 7.36 46.74 1.75
4905 6606 3.836365 AGATTAGCTTCCTTCTCCTGC 57.164 47.619 0.00 0.00 0.00 4.85
4925 6626 5.752472 CCTGCTACTGAATGTATCTTGTGAG 59.248 44.000 0.00 0.00 0.00 3.51
4944 6645 5.105595 TGTGAGTCAGGAGTAGAATCATGTG 60.106 44.000 0.00 0.00 41.38 3.21
4968 6686 4.685169 TTTTGCTGATCAACTTCGATCC 57.315 40.909 0.00 0.00 41.00 3.36
4969 6687 3.333029 TTGCTGATCAACTTCGATCCA 57.667 42.857 0.00 0.00 41.00 3.41
4974 6692 2.571653 TGATCAACTTCGATCCAGGGTT 59.428 45.455 0.00 0.00 41.00 4.11
5021 6739 6.970043 GCAACATACAGTGAACAAACAACTAA 59.030 34.615 0.00 0.00 0.00 2.24
5022 6740 7.044314 GCAACATACAGTGAACAAACAACTAAC 60.044 37.037 0.00 0.00 0.00 2.34
5023 6741 7.023197 ACATACAGTGAACAAACAACTAACC 57.977 36.000 0.00 0.00 0.00 2.85
5024 6742 4.609691 ACAGTGAACAAACAACTAACCG 57.390 40.909 0.00 0.00 0.00 4.44
5025 6743 4.255301 ACAGTGAACAAACAACTAACCGA 58.745 39.130 0.00 0.00 0.00 4.69
5026 6744 4.093850 ACAGTGAACAAACAACTAACCGAC 59.906 41.667 0.00 0.00 0.00 4.79
5027 6745 3.307782 AGTGAACAAACAACTAACCGACG 59.692 43.478 0.00 0.00 0.00 5.12
5028 6746 2.030701 TGAACAAACAACTAACCGACGC 59.969 45.455 0.00 0.00 0.00 5.19
5029 6747 1.654317 ACAAACAACTAACCGACGCA 58.346 45.000 0.00 0.00 0.00 5.24
5030 6748 1.328374 ACAAACAACTAACCGACGCAC 59.672 47.619 0.00 0.00 0.00 5.34
5031 6749 1.328069 CAAACAACTAACCGACGCACA 59.672 47.619 0.00 0.00 0.00 4.57
5032 6750 1.214367 AACAACTAACCGACGCACAG 58.786 50.000 0.00 0.00 0.00 3.66
5033 6751 0.103572 ACAACTAACCGACGCACAGT 59.896 50.000 0.00 0.00 0.00 3.55
5034 6752 1.214367 CAACTAACCGACGCACAGTT 58.786 50.000 0.00 0.00 0.00 3.16
5035 6753 1.191647 CAACTAACCGACGCACAGTTC 59.808 52.381 3.99 0.00 0.00 3.01
5036 6754 0.319297 ACTAACCGACGCACAGTTCC 60.319 55.000 0.00 0.00 0.00 3.62
5037 6755 0.038526 CTAACCGACGCACAGTTCCT 60.039 55.000 0.00 0.00 0.00 3.36
5038 6756 0.319211 TAACCGACGCACAGTTCCTG 60.319 55.000 0.00 0.00 37.52 3.86
5039 6757 3.414700 CCGACGCACAGTTCCTGC 61.415 66.667 0.00 0.00 34.37 4.85
5044 6762 2.939022 GCACAGTTCCTGCGTCAC 59.061 61.111 0.00 0.00 34.37 3.67
5045 6763 2.607892 GCACAGTTCCTGCGTCACC 61.608 63.158 0.00 0.00 34.37 4.02
5046 6764 2.029073 ACAGTTCCTGCGTCACCG 59.971 61.111 0.00 0.00 34.37 4.94
5047 6765 2.738521 CAGTTCCTGCGTCACCGG 60.739 66.667 0.00 0.00 33.68 5.28
5048 6766 4.003788 AGTTCCTGCGTCACCGGG 62.004 66.667 6.32 0.00 33.68 5.73
5091 6809 3.426568 GAGCCGTTGGAGCAGCAC 61.427 66.667 0.00 0.00 0.00 4.40
5094 6812 3.414700 CCGTTGGAGCAGCACGTC 61.415 66.667 0.00 0.00 31.83 4.34
5095 6813 3.767230 CGTTGGAGCAGCACGTCG 61.767 66.667 0.00 0.00 0.00 5.12
5096 6814 2.661866 GTTGGAGCAGCACGTCGT 60.662 61.111 0.00 0.00 0.00 4.34
5097 6815 2.108157 TTGGAGCAGCACGTCGTT 59.892 55.556 0.00 0.00 0.00 3.85
5098 6816 1.954146 TTGGAGCAGCACGTCGTTC 60.954 57.895 0.00 0.00 0.00 3.95
5099 6817 3.112709 GGAGCAGCACGTCGTTCC 61.113 66.667 0.00 0.00 0.00 3.62
5100 6818 2.355837 GAGCAGCACGTCGTTCCA 60.356 61.111 0.00 0.00 0.00 3.53
5101 6819 2.658707 GAGCAGCACGTCGTTCCAC 61.659 63.158 0.00 0.00 0.00 4.02
5102 6820 2.964925 GCAGCACGTCGTTCCACA 60.965 61.111 0.00 0.00 0.00 4.17
5103 6821 2.317609 GCAGCACGTCGTTCCACAT 61.318 57.895 0.00 0.00 0.00 3.21
5104 6822 1.492873 CAGCACGTCGTTCCACATG 59.507 57.895 0.00 0.00 0.00 3.21
5105 6823 1.069090 AGCACGTCGTTCCACATGT 59.931 52.632 0.00 0.00 0.00 3.21
5106 6824 0.944311 AGCACGTCGTTCCACATGTC 60.944 55.000 0.00 0.00 0.00 3.06
5107 6825 1.897398 GCACGTCGTTCCACATGTCC 61.897 60.000 0.00 0.00 0.00 4.02
5108 6826 0.598942 CACGTCGTTCCACATGTCCA 60.599 55.000 0.00 0.00 0.00 4.02
5109 6827 0.599204 ACGTCGTTCCACATGTCCAC 60.599 55.000 0.00 0.00 0.00 4.02
5110 6828 1.289109 CGTCGTTCCACATGTCCACC 61.289 60.000 0.00 0.00 0.00 4.61
5111 6829 1.005512 TCGTTCCACATGTCCACCG 60.006 57.895 0.00 0.00 0.00 4.94
5112 6830 2.032634 CGTTCCACATGTCCACCGG 61.033 63.158 0.00 0.00 0.00 5.28
5113 6831 2.033448 TTCCACATGTCCACCGGC 59.967 61.111 0.00 0.00 0.00 6.13
5114 6832 3.561120 TTCCACATGTCCACCGGCC 62.561 63.158 0.00 0.00 0.00 6.13
5140 6858 2.941333 CACCAGTGCAAGCAGTCG 59.059 61.111 0.00 0.00 0.00 4.18
5141 6859 1.889105 CACCAGTGCAAGCAGTCGT 60.889 57.895 0.00 0.00 0.00 4.34
5142 6860 1.153168 ACCAGTGCAAGCAGTCGTT 60.153 52.632 0.00 0.00 0.00 3.85
5143 6861 1.280746 CCAGTGCAAGCAGTCGTTG 59.719 57.895 0.00 0.00 0.00 4.10
5177 6895 4.470876 TCGTTGTCGATCTTCCGC 57.529 55.556 0.00 0.00 41.35 5.54
5178 6896 1.153901 TCGTTGTCGATCTTCCGCC 60.154 57.895 0.00 0.00 41.35 6.13
5179 6897 1.153823 CGTTGTCGATCTTCCGCCT 60.154 57.895 0.00 0.00 39.71 5.52
5180 6898 1.413767 CGTTGTCGATCTTCCGCCTG 61.414 60.000 0.00 0.00 39.71 4.85
5181 6899 1.447838 TTGTCGATCTTCCGCCTGC 60.448 57.895 0.00 0.00 0.00 4.85
5182 6900 2.586357 GTCGATCTTCCGCCTGCC 60.586 66.667 0.00 0.00 0.00 4.85
5183 6901 4.207281 TCGATCTTCCGCCTGCCG 62.207 66.667 0.00 0.00 0.00 5.69
5194 6912 2.361610 CCTGCCGGAATGCCAGTT 60.362 61.111 5.05 0.00 0.00 3.16
5195 6913 2.409870 CCTGCCGGAATGCCAGTTC 61.410 63.158 5.05 0.00 0.00 3.01
5243 6961 0.673644 CCTTGGTCACGTCCATCACC 60.674 60.000 0.00 0.00 37.33 4.02
5246 6964 2.125673 GTCACGTCCATCACCCCG 60.126 66.667 0.00 0.00 0.00 5.73
5247 6965 3.387091 TCACGTCCATCACCCCGG 61.387 66.667 0.00 0.00 0.00 5.73
5256 6974 1.689582 ATCACCCCGGAGAACCTCC 60.690 63.158 0.73 2.97 46.44 4.30
5300 7018 3.465403 CGCACCTCCTCCCTCTGG 61.465 72.222 0.00 0.00 0.00 3.86
5303 7021 1.687493 CACCTCCTCCCTCTGGACC 60.687 68.421 0.00 0.00 35.03 4.46
5305 7023 2.641746 CCTCCTCCCTCTGGACCCT 61.642 68.421 0.00 0.00 35.03 4.34
5322 7040 3.965026 CTCCTCAGCTCCCACCCGA 62.965 68.421 0.00 0.00 0.00 5.14
5324 7042 3.775654 CTCAGCTCCCACCCGACC 61.776 72.222 0.00 0.00 0.00 4.79
5342 7060 2.685380 CCCTCCAAGGCGACCTCT 60.685 66.667 0.00 0.00 32.73 3.69
5376 7098 1.080772 CGCGTCCTGTTGCAGTAGA 60.081 57.895 0.00 0.00 0.00 2.59
5423 7145 3.755628 TGGCTCGGCGTGTAGGTC 61.756 66.667 6.85 0.00 0.00 3.85
5462 7184 2.437359 GGCTTGCAGTCTCGGCAT 60.437 61.111 0.00 0.00 41.58 4.40
5463 7185 2.042831 GGCTTGCAGTCTCGGCATT 61.043 57.895 0.00 0.00 41.58 3.56
5512 7234 3.429141 GCGTCTGACTCCGTCGGA 61.429 66.667 14.54 14.54 44.47 4.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.417911 GGAGAAGGGTGAAAATTGAGACTTTTT 60.418 37.037 0.00 0.00 0.00 1.94
1 2 6.040955 GGAGAAGGGTGAAAATTGAGACTTTT 59.959 38.462 0.00 0.00 0.00 2.27
2 3 5.536538 GGAGAAGGGTGAAAATTGAGACTTT 59.463 40.000 0.00 0.00 0.00 2.66
3 4 5.073428 GGAGAAGGGTGAAAATTGAGACTT 58.927 41.667 0.00 0.00 0.00 3.01
4 5 4.507512 GGGAGAAGGGTGAAAATTGAGACT 60.508 45.833 0.00 0.00 0.00 3.24
5 6 3.759086 GGGAGAAGGGTGAAAATTGAGAC 59.241 47.826 0.00 0.00 0.00 3.36
6 7 3.245264 GGGGAGAAGGGTGAAAATTGAGA 60.245 47.826 0.00 0.00 0.00 3.27
7 8 3.092301 GGGGAGAAGGGTGAAAATTGAG 58.908 50.000 0.00 0.00 0.00 3.02
8 9 2.448961 TGGGGAGAAGGGTGAAAATTGA 59.551 45.455 0.00 0.00 0.00 2.57
9 10 2.827921 CTGGGGAGAAGGGTGAAAATTG 59.172 50.000 0.00 0.00 0.00 2.32
10 11 2.823152 GCTGGGGAGAAGGGTGAAAATT 60.823 50.000 0.00 0.00 0.00 1.82
11 12 1.272704 GCTGGGGAGAAGGGTGAAAAT 60.273 52.381 0.00 0.00 0.00 1.82
12 13 0.112412 GCTGGGGAGAAGGGTGAAAA 59.888 55.000 0.00 0.00 0.00 2.29
13 14 1.065410 TGCTGGGGAGAAGGGTGAAA 61.065 55.000 0.00 0.00 0.00 2.69
14 15 1.463214 TGCTGGGGAGAAGGGTGAA 60.463 57.895 0.00 0.00 0.00 3.18
15 16 1.920325 CTGCTGGGGAGAAGGGTGA 60.920 63.158 0.00 0.00 0.00 4.02
16 17 2.673523 CTGCTGGGGAGAAGGGTG 59.326 66.667 0.00 0.00 0.00 4.61
17 18 2.612115 CCTGCTGGGGAGAAGGGT 60.612 66.667 0.71 0.00 0.00 4.34
18 19 2.285668 TCCTGCTGGGGAGAAGGG 60.286 66.667 10.07 0.00 35.33 3.95
24 25 3.897681 TACACGCTCCTGCTGGGGA 62.898 63.158 14.76 3.57 35.23 4.81
25 26 3.376935 CTACACGCTCCTGCTGGGG 62.377 68.421 10.07 7.59 36.97 4.96
26 27 1.888436 TTCTACACGCTCCTGCTGGG 61.888 60.000 10.07 1.89 36.97 4.45
27 28 0.037326 TTTCTACACGCTCCTGCTGG 60.037 55.000 2.58 2.58 36.97 4.85
28 29 1.071605 GTTTCTACACGCTCCTGCTG 58.928 55.000 0.00 0.00 36.97 4.41
29 30 0.969894 AGTTTCTACACGCTCCTGCT 59.030 50.000 0.00 0.00 36.97 4.24
30 31 1.797025 AAGTTTCTACACGCTCCTGC 58.203 50.000 0.00 0.00 0.00 4.85
31 32 3.560068 ACAAAAGTTTCTACACGCTCCTG 59.440 43.478 0.00 0.00 0.00 3.86
32 33 3.805207 ACAAAAGTTTCTACACGCTCCT 58.195 40.909 0.00 0.00 0.00 3.69
33 34 4.524749 GAACAAAAGTTTCTACACGCTCC 58.475 43.478 0.00 0.00 0.00 4.70
34 35 4.524749 GGAACAAAAGTTTCTACACGCTC 58.475 43.478 0.00 0.00 0.00 5.03
35 36 3.314357 GGGAACAAAAGTTTCTACACGCT 59.686 43.478 0.00 0.00 0.00 5.07
36 37 3.624900 GGGAACAAAAGTTTCTACACGC 58.375 45.455 0.00 0.00 0.00 5.34
37 38 3.556775 TCGGGAACAAAAGTTTCTACACG 59.443 43.478 0.00 0.00 0.00 4.49
38 39 4.333372 TGTCGGGAACAAAAGTTTCTACAC 59.667 41.667 0.00 0.00 34.03 2.90
39 40 4.333372 GTGTCGGGAACAAAAGTTTCTACA 59.667 41.667 0.00 0.00 40.31 2.74
40 41 4.333372 TGTGTCGGGAACAAAAGTTTCTAC 59.667 41.667 0.00 0.00 40.31 2.59
41 42 4.515361 TGTGTCGGGAACAAAAGTTTCTA 58.485 39.130 0.00 0.00 40.31 2.10
42 43 3.349022 TGTGTCGGGAACAAAAGTTTCT 58.651 40.909 0.00 0.00 40.31 2.52
43 44 3.488553 CCTGTGTCGGGAACAAAAGTTTC 60.489 47.826 0.00 0.00 40.31 2.78
44 45 2.425668 CCTGTGTCGGGAACAAAAGTTT 59.574 45.455 0.00 0.00 40.31 2.66
45 46 2.021457 CCTGTGTCGGGAACAAAAGTT 58.979 47.619 0.00 0.00 40.31 2.66
46 47 1.210967 TCCTGTGTCGGGAACAAAAGT 59.789 47.619 0.00 0.00 40.31 2.66
47 48 1.961793 TCCTGTGTCGGGAACAAAAG 58.038 50.000 0.00 0.00 40.31 2.27
48 49 2.649531 ATCCTGTGTCGGGAACAAAA 57.350 45.000 1.27 0.00 42.74 2.44
49 50 2.635915 ACTATCCTGTGTCGGGAACAAA 59.364 45.455 1.27 0.00 42.74 2.83
50 51 2.253610 ACTATCCTGTGTCGGGAACAA 58.746 47.619 1.27 0.00 42.74 2.83
51 52 1.933021 ACTATCCTGTGTCGGGAACA 58.067 50.000 1.27 0.00 42.74 3.18
52 53 2.361438 CCTACTATCCTGTGTCGGGAAC 59.639 54.545 1.27 0.00 42.74 3.62
53 54 2.242965 TCCTACTATCCTGTGTCGGGAA 59.757 50.000 1.27 0.00 42.74 3.97
54 55 1.848388 TCCTACTATCCTGTGTCGGGA 59.152 52.381 0.00 0.00 43.71 5.14
55 56 1.955080 GTCCTACTATCCTGTGTCGGG 59.045 57.143 0.00 0.00 0.00 5.14
56 57 1.955080 GGTCCTACTATCCTGTGTCGG 59.045 57.143 0.00 0.00 0.00 4.79
57 58 2.933573 AGGTCCTACTATCCTGTGTCG 58.066 52.381 0.00 0.00 0.00 4.35
58 59 3.315749 CGAAGGTCCTACTATCCTGTGTC 59.684 52.174 0.00 0.00 0.00 3.67
59 60 3.053842 TCGAAGGTCCTACTATCCTGTGT 60.054 47.826 0.00 0.00 0.00 3.72
60 61 3.315749 GTCGAAGGTCCTACTATCCTGTG 59.684 52.174 0.00 0.00 0.00 3.66
61 62 3.553904 GTCGAAGGTCCTACTATCCTGT 58.446 50.000 0.00 0.00 0.00 4.00
69 70 0.109412 CACACCGTCGAAGGTCCTAC 60.109 60.000 20.79 0.00 43.89 3.18
340 345 3.414700 GACGTTGGAGTGGCAGCG 61.415 66.667 0.00 0.00 0.00 5.18
377 385 1.261354 CACAGGTGTGTTGTCGATGTG 59.739 52.381 1.70 0.00 40.96 3.21
393 401 9.205719 CCATAGATAGATGTTCTTCAATCACAG 57.794 37.037 0.00 0.00 0.00 3.66
404 412 6.712095 TGCAATCCAACCATAGATAGATGTTC 59.288 38.462 0.00 0.00 0.00 3.18
430 438 2.178580 TCTTGATGGTTGGGCAAATCC 58.821 47.619 0.00 0.00 0.00 3.01
442 450 0.250209 CAGCCCGGAGATCTTGATGG 60.250 60.000 0.73 0.00 0.00 3.51
456 465 1.737793 CGTGTCCAATAAACTCAGCCC 59.262 52.381 0.00 0.00 0.00 5.19
460 469 4.888917 TCATGTCGTGTCCAATAAACTCA 58.111 39.130 0.00 0.00 0.00 3.41
462 471 5.123820 CCATTCATGTCGTGTCCAATAAACT 59.876 40.000 0.00 0.00 0.00 2.66
470 479 0.447801 GTGCCATTCATGTCGTGTCC 59.552 55.000 0.00 0.00 0.00 4.02
505 514 6.817140 ACCTCTTAGTACTTATTTTTGGCTCG 59.183 38.462 0.00 0.00 0.00 5.03
509 518 8.319146 TCAGGACCTCTTAGTACTTATTTTTGG 58.681 37.037 0.00 0.00 0.00 3.28
529 538 1.853963 TAGAGAAGCCCACTCAGGAC 58.146 55.000 0.00 0.00 41.22 3.85
640 738 9.353999 CGAGTCGGATTATGTAATTGATTATGA 57.646 33.333 4.10 0.00 0.00 2.15
661 759 1.153549 GCACCTGGATCCACGAGTC 60.154 63.158 11.44 0.00 0.00 3.36
667 765 1.738346 CTCGATCGCACCTGGATCCA 61.738 60.000 15.27 15.27 37.58 3.41
720 867 0.455410 GCAGTTTTGCTGTGGTGACA 59.545 50.000 0.00 0.00 46.95 3.58
745 892 4.282195 CCTTCTCCACCGCTCTCTTTATAT 59.718 45.833 0.00 0.00 0.00 0.86
746 893 3.637229 CCTTCTCCACCGCTCTCTTTATA 59.363 47.826 0.00 0.00 0.00 0.98
748 895 1.825474 CCTTCTCCACCGCTCTCTTTA 59.175 52.381 0.00 0.00 0.00 1.85
753 900 0.616111 ACATCCTTCTCCACCGCTCT 60.616 55.000 0.00 0.00 0.00 4.09
754 901 0.460987 CACATCCTTCTCCACCGCTC 60.461 60.000 0.00 0.00 0.00 5.03
755 902 0.904865 TCACATCCTTCTCCACCGCT 60.905 55.000 0.00 0.00 0.00 5.52
756 903 0.741221 GTCACATCCTTCTCCACCGC 60.741 60.000 0.00 0.00 0.00 5.68
784 1305 3.855853 GGGAGAGGCGAAGGGAGC 61.856 72.222 0.00 0.00 0.00 4.70
786 1307 2.042843 GAGGGAGAGGCGAAGGGA 60.043 66.667 0.00 0.00 0.00 4.20
787 1308 2.042435 AGAGGGAGAGGCGAAGGG 60.042 66.667 0.00 0.00 0.00 3.95
788 1309 0.686112 AAGAGAGGGAGAGGCGAAGG 60.686 60.000 0.00 0.00 0.00 3.46
789 1310 0.744281 GAAGAGAGGGAGAGGCGAAG 59.256 60.000 0.00 0.00 0.00 3.79
790 1311 0.039764 TGAAGAGAGGGAGAGGCGAA 59.960 55.000 0.00 0.00 0.00 4.70
791 1312 0.395036 CTGAAGAGAGGGAGAGGCGA 60.395 60.000 0.00 0.00 0.00 5.54
792 1313 2.015227 GCTGAAGAGAGGGAGAGGCG 62.015 65.000 0.00 0.00 0.00 5.52
793 1314 0.687427 AGCTGAAGAGAGGGAGAGGC 60.687 60.000 0.00 0.00 0.00 4.70
794 1315 1.756538 GAAGCTGAAGAGAGGGAGAGG 59.243 57.143 0.00 0.00 0.00 3.69
795 1316 1.756538 GGAAGCTGAAGAGAGGGAGAG 59.243 57.143 0.00 0.00 0.00 3.20
796 1317 1.621072 GGGAAGCTGAAGAGAGGGAGA 60.621 57.143 0.00 0.00 0.00 3.71
797 1318 0.829990 GGGAAGCTGAAGAGAGGGAG 59.170 60.000 0.00 0.00 0.00 4.30
798 1319 0.415429 AGGGAAGCTGAAGAGAGGGA 59.585 55.000 0.00 0.00 0.00 4.20
799 1320 1.284313 AAGGGAAGCTGAAGAGAGGG 58.716 55.000 0.00 0.00 0.00 4.30
800 1321 2.709213 CAAAGGGAAGCTGAAGAGAGG 58.291 52.381 0.00 0.00 0.00 3.69
801 1322 2.083002 GCAAAGGGAAGCTGAAGAGAG 58.917 52.381 0.00 0.00 0.00 3.20
802 1323 1.271597 GGCAAAGGGAAGCTGAAGAGA 60.272 52.381 0.00 0.00 0.00 3.10
863 1384 2.203437 AGGGGTTGGTTGGTTCGC 60.203 61.111 0.00 0.00 0.00 4.70
865 1386 2.265904 GCGAGGGGTTGGTTGGTTC 61.266 63.158 0.00 0.00 0.00 3.62
882 1404 2.225255 GGCTTGAGAAGTTTCAGTGAGC 59.775 50.000 0.00 0.00 0.00 4.26
954 1482 2.788191 AAGGGAAGCCGACTGAAGCG 62.788 60.000 0.00 0.00 0.00 4.68
955 1483 1.003233 AAGGGAAGCCGACTGAAGC 60.003 57.895 0.00 0.00 0.00 3.86
956 1484 0.391793 GGAAGGGAAGCCGACTGAAG 60.392 60.000 0.00 0.00 0.00 3.02
957 1485 0.836400 AGGAAGGGAAGCCGACTGAA 60.836 55.000 0.00 0.00 0.00 3.02
963 1491 1.741770 CGACAAGGAAGGGAAGCCG 60.742 63.158 0.00 0.00 0.00 5.52
966 1494 0.601558 TCGACGACAAGGAAGGGAAG 59.398 55.000 0.00 0.00 0.00 3.46
968 1496 0.538977 ACTCGACGACAAGGAAGGGA 60.539 55.000 0.00 0.00 0.00 4.20
1122 1650 5.843019 AACCCAAAGACAAATAGAGAGGA 57.157 39.130 0.00 0.00 0.00 3.71
1124 1652 7.979444 TTGTAACCCAAAGACAAATAGAGAG 57.021 36.000 0.00 0.00 30.37 3.20
1125 1653 8.934023 ATTTGTAACCCAAAGACAAATAGAGA 57.066 30.769 9.77 0.00 46.65 3.10
1132 1667 5.452077 CCCGAAATTTGTAACCCAAAGACAA 60.452 40.000 0.00 0.00 45.79 3.18
1139 1674 2.164338 GAGCCCGAAATTTGTAACCCA 58.836 47.619 0.00 0.00 0.00 4.51
1143 1678 3.756434 CCAAGAGAGCCCGAAATTTGTAA 59.244 43.478 0.00 0.00 0.00 2.41
1178 1714 2.194326 GGAATCCTGAGCCCTGGC 59.806 66.667 0.00 0.00 42.33 4.85
1212 1754 0.931005 GCGAATCTAGCAAACCGGAG 59.069 55.000 9.46 0.00 34.19 4.63
1222 1764 4.929808 ACACAAACAAGTAGGCGAATCTAG 59.070 41.667 0.00 0.00 0.00 2.43
1307 1899 4.563976 CAGCACAAACAGAAAAGGAAGTTG 59.436 41.667 0.00 0.00 0.00 3.16
1314 1906 1.538849 GGCCCAGCACAAACAGAAAAG 60.539 52.381 0.00 0.00 0.00 2.27
1315 1907 0.463620 GGCCCAGCACAAACAGAAAA 59.536 50.000 0.00 0.00 0.00 2.29
1316 1908 0.396974 AGGCCCAGCACAAACAGAAA 60.397 50.000 0.00 0.00 0.00 2.52
1319 1911 0.465287 AAAAGGCCCAGCACAAACAG 59.535 50.000 0.00 0.00 0.00 3.16
1322 1914 2.102252 CTGTAAAAAGGCCCAGCACAAA 59.898 45.455 0.00 0.00 0.00 2.83
1379 1974 2.970324 CCGTCCACCACCACGTTG 60.970 66.667 0.00 0.00 34.06 4.10
1435 2030 4.202441 ACAGGCAGCATGGATAAGTAAAG 58.798 43.478 12.54 0.00 35.86 1.85
1468 2091 1.615392 GGAAACTGCAAATGTGGAGCT 59.385 47.619 3.96 0.00 46.64 4.09
1509 2135 7.466804 TCCCAAAGAAAGAGTGGTGTAATAAT 58.533 34.615 0.00 0.00 0.00 1.28
1518 2144 2.157738 CAGCTCCCAAAGAAAGAGTGG 58.842 52.381 0.00 0.00 0.00 4.00
1527 2153 1.975407 CCTGTGGCAGCTCCCAAAG 60.975 63.158 6.92 6.92 39.52 2.77
1528 2154 1.792757 ATCCTGTGGCAGCTCCCAAA 61.793 55.000 0.00 0.00 36.46 3.28
1529 2155 1.792757 AATCCTGTGGCAGCTCCCAA 61.793 55.000 0.00 0.00 36.46 4.12
1530 2156 1.792757 AAATCCTGTGGCAGCTCCCA 61.793 55.000 0.00 0.00 0.00 4.37
1531 2157 0.613012 AAAATCCTGTGGCAGCTCCC 60.613 55.000 0.00 0.00 0.00 4.30
1532 2158 2.128771 TAAAATCCTGTGGCAGCTCC 57.871 50.000 0.00 0.00 0.00 4.70
1533 2159 2.620585 GGATAAAATCCTGTGGCAGCTC 59.379 50.000 0.00 0.00 46.19 4.09
1553 2179 0.528924 TCCACACGATAAGACCACGG 59.471 55.000 0.00 0.00 0.00 4.94
1554 2180 1.201647 ACTCCACACGATAAGACCACG 59.798 52.381 0.00 0.00 0.00 4.94
1565 2191 4.035017 GTGAACAAATTGAACTCCACACG 58.965 43.478 0.00 0.00 0.00 4.49
1758 2390 7.432252 CGATAAAAACCAACTGAATGAATAGCC 59.568 37.037 0.00 0.00 0.00 3.93
1886 2521 1.322442 AAAGTGCCTTCCTTGACAGC 58.678 50.000 0.00 0.00 0.00 4.40
1908 2546 3.181488 CGGACAAATATGCAGCCAAATGA 60.181 43.478 0.00 0.00 0.00 2.57
2015 2661 3.569701 GTCCAAGAAGCATCACAAGGAAA 59.430 43.478 0.00 0.00 0.00 3.13
2028 2674 7.633193 AGTAGTATGACAGTAGTCCAAGAAG 57.367 40.000 0.00 0.00 44.33 2.85
2062 2708 8.856103 ACTTTTGGTAGCATTTAAACATGTACT 58.144 29.630 0.00 0.00 0.00 2.73
2104 2826 4.806247 GCTCCAAACATGCACTACTACTAG 59.194 45.833 0.00 0.00 0.00 2.57
2106 2828 3.007940 TGCTCCAAACATGCACTACTACT 59.992 43.478 0.00 0.00 0.00 2.57
2110 2832 3.641437 TTTGCTCCAAACATGCACTAC 57.359 42.857 0.00 0.00 36.37 2.73
2133 2855 9.140286 CTGACAACGAACTGGGTAATATATATG 57.860 37.037 0.00 0.00 0.00 1.78
2138 2860 5.187186 AGACTGACAACGAACTGGGTAATAT 59.813 40.000 0.00 0.00 0.00 1.28
2139 2861 4.525487 AGACTGACAACGAACTGGGTAATA 59.475 41.667 0.00 0.00 0.00 0.98
2140 2862 3.323979 AGACTGACAACGAACTGGGTAAT 59.676 43.478 0.00 0.00 0.00 1.89
2145 2867 2.509052 TGAGACTGACAACGAACTGG 57.491 50.000 0.00 0.00 0.00 4.00
2160 2882 0.770499 TGGGCCACTGATTGTTGAGA 59.230 50.000 0.00 0.00 0.00 3.27
2165 2887 1.067295 TCTTCTGGGCCACTGATTGT 58.933 50.000 0.00 0.00 0.00 2.71
2186 2908 7.330900 AGCAAGAAGTGATCCATAAGAAATG 57.669 36.000 0.00 0.00 0.00 2.32
2241 2964 1.086696 CCAATCCATTCGCGAAGTGT 58.913 50.000 27.20 7.74 40.08 3.55
2256 2979 7.865706 AGAATAGATGTTTTCTTACGCCAAT 57.134 32.000 0.00 0.00 35.79 3.16
2317 3085 5.707242 TCGTGTAATCCTAGAAGCTATGG 57.293 43.478 0.00 0.00 0.00 2.74
2404 3175 2.262211 GAATTCAAACGCCAGCATTCC 58.738 47.619 0.00 0.00 0.00 3.01
2462 3233 1.993370 GCAACCACGTGAGACTCATAC 59.007 52.381 19.30 0.00 0.00 2.39
2463 3234 1.893137 AGCAACCACGTGAGACTCATA 59.107 47.619 19.30 0.00 0.00 2.15
2474 3265 1.466167 CTCATCCTTTGAGCAACCACG 59.534 52.381 0.00 0.00 45.16 4.94
2537 3348 6.079763 GTGTCACATTATTAACACTGCACAG 58.920 40.000 0.00 0.00 39.09 3.66
2585 3396 9.374960 CGAGTTCAGATCTTTAAGAAAAGTTTG 57.625 33.333 0.00 0.00 42.36 2.93
2610 3421 6.835914 AGAAAGATCAGTATTTGCAGAAACG 58.164 36.000 0.00 0.00 0.00 3.60
2636 3448 3.181506 GGCTTCTGTATAGTTTGCTGTGC 60.182 47.826 0.00 0.00 0.00 4.57
2637 3449 4.002982 TGGCTTCTGTATAGTTTGCTGTG 58.997 43.478 0.00 0.00 0.00 3.66
2639 3451 5.824904 AATGGCTTCTGTATAGTTTGCTG 57.175 39.130 0.00 0.00 0.00 4.41
2640 3452 5.711976 ACAAATGGCTTCTGTATAGTTTGCT 59.288 36.000 0.00 0.00 0.00 3.91
2642 3454 7.370383 ACAACAAATGGCTTCTGTATAGTTTG 58.630 34.615 0.00 0.00 0.00 2.93
2646 3458 8.816640 AAAAACAACAAATGGCTTCTGTATAG 57.183 30.769 0.00 0.00 0.00 1.31
2746 3607 9.516546 ACGGAGATCTGTATGTAAGTAATATCA 57.483 33.333 0.00 0.00 32.82 2.15
2747 3608 9.776158 CACGGAGATCTGTATGTAAGTAATATC 57.224 37.037 0.00 0.00 33.39 1.63
2753 3614 5.886474 TCTTCACGGAGATCTGTATGTAAGT 59.114 40.000 0.00 0.00 33.39 2.24
2808 3669 0.603707 GAGCTGCAGTAACAGGCACA 60.604 55.000 16.64 0.00 38.16 4.57
2821 3682 1.338200 CGGGGATAATACCTGAGCTGC 60.338 57.143 0.00 0.00 36.43 5.25
2878 3743 1.021202 TCAAAGGCCAACTGTGAACG 58.979 50.000 5.01 0.00 40.52 3.95
2882 3747 4.202141 TGAAGAAATCAAAGGCCAACTGTG 60.202 41.667 5.01 0.00 34.30 3.66
2899 3764 6.551601 GGAACAGAGGGAGTAGATATGAAGAA 59.448 42.308 0.00 0.00 0.00 2.52
2906 3771 8.508601 TGTATTTAGGAACAGAGGGAGTAGATA 58.491 37.037 0.00 0.00 0.00 1.98
2931 3796 7.273381 CCGTATTGGCATCTTTAAAAAGACTTG 59.727 37.037 7.29 4.81 46.80 3.16
2935 3800 6.657541 AGTCCGTATTGGCATCTTTAAAAAGA 59.342 34.615 7.56 7.56 42.71 2.52
2936 3801 6.852664 AGTCCGTATTGGCATCTTTAAAAAG 58.147 36.000 0.00 0.00 37.80 2.27
2937 3802 6.827586 AGTCCGTATTGGCATCTTTAAAAA 57.172 33.333 0.00 0.00 37.80 1.94
2943 3808 4.689612 ATGTAGTCCGTATTGGCATCTT 57.310 40.909 0.00 0.00 37.80 2.40
2948 3813 4.025145 GCTTTGTATGTAGTCCGTATTGGC 60.025 45.833 0.00 0.00 37.80 4.52
2949 3814 5.113383 TGCTTTGTATGTAGTCCGTATTGG 58.887 41.667 0.00 0.00 40.09 3.16
2950 3815 6.656314 TTGCTTTGTATGTAGTCCGTATTG 57.344 37.500 0.00 0.00 0.00 1.90
2999 3866 8.182881 GGACTACATTCGGATGTATATAGACAC 58.817 40.741 16.89 5.14 45.20 3.67
3000 3867 8.107729 AGGACTACATTCGGATGTATATAGACA 58.892 37.037 16.89 2.07 45.20 3.41
3001 3868 8.508883 AGGACTACATTCGGATGTATATAGAC 57.491 38.462 16.89 7.51 45.20 2.59
3014 3881 8.879342 AGAGATTTCAATAAGGACTACATTCG 57.121 34.615 0.00 0.00 0.00 3.34
3044 3911 8.302515 AGTCCTCCGTTTCTAAATATAAGTCA 57.697 34.615 0.00 0.00 0.00 3.41
3046 3913 9.193806 TGTAGTCCTCCGTTTCTAAATATAAGT 57.806 33.333 0.00 0.00 0.00 2.24
3079 3946 3.847671 GGGGTCATCCTCCTTTTCTAG 57.152 52.381 0.00 0.00 35.33 2.43
3115 3982 0.175760 AAGTGACCGTATGCATCGCT 59.824 50.000 0.19 0.00 34.72 4.93
3180 4047 1.152383 GCTTAGACGGCGGCTTTAGG 61.152 60.000 25.39 5.15 0.00 2.69
3234 4114 3.014623 GTCTGTTTGGTATTAGGCCCAC 58.985 50.000 0.00 0.00 0.00 4.61
3382 4285 3.181503 GCAAGGTTGATGCATCAGTACAG 60.182 47.826 27.25 19.16 43.29 2.74
3466 4369 0.874607 GACCGTGACGTGCTCAGTTT 60.875 55.000 3.64 0.00 0.00 2.66
3468 4371 2.335369 GACCGTGACGTGCTCAGT 59.665 61.111 3.64 0.00 0.00 3.41
3480 4383 1.214589 GTGTATCAGTGGCGACCGT 59.785 57.895 0.00 0.00 0.00 4.83
3683 5297 3.416156 CTCCTTCCCTTCTTGTTTCCTG 58.584 50.000 0.00 0.00 0.00 3.86
3686 5300 2.163509 GCCTCCTTCCCTTCTTGTTTC 58.836 52.381 0.00 0.00 0.00 2.78
3687 5301 1.545651 CGCCTCCTTCCCTTCTTGTTT 60.546 52.381 0.00 0.00 0.00 2.83
3688 5302 0.036875 CGCCTCCTTCCCTTCTTGTT 59.963 55.000 0.00 0.00 0.00 2.83
3689 5303 1.679898 CGCCTCCTTCCCTTCTTGT 59.320 57.895 0.00 0.00 0.00 3.16
3690 5304 1.078143 CCGCCTCCTTCCCTTCTTG 60.078 63.158 0.00 0.00 0.00 3.02
3691 5305 1.229529 TCCGCCTCCTTCCCTTCTT 60.230 57.895 0.00 0.00 0.00 2.52
3763 5377 3.756783 CCGACTCCTCCCTCCCCT 61.757 72.222 0.00 0.00 0.00 4.79
3768 5382 4.332543 TTGGGCCGACTCCTCCCT 62.333 66.667 0.00 0.00 40.69 4.20
3770 5384 3.003763 ACTTGGGCCGACTCCTCC 61.004 66.667 0.00 0.00 0.00 4.30
3771 5385 2.266055 CACTTGGGCCGACTCCTC 59.734 66.667 0.00 0.00 0.00 3.71
3772 5386 2.526873 ACACTTGGGCCGACTCCT 60.527 61.111 0.00 0.00 0.00 3.69
3773 5387 2.358737 CACACTTGGGCCGACTCC 60.359 66.667 0.00 0.00 0.00 3.85
3774 5388 0.534203 TTTCACACTTGGGCCGACTC 60.534 55.000 0.00 0.00 0.00 3.36
3775 5389 0.110486 ATTTCACACTTGGGCCGACT 59.890 50.000 0.00 0.00 0.00 4.18
3776 5390 0.521735 GATTTCACACTTGGGCCGAC 59.478 55.000 0.00 0.00 0.00 4.79
3777 5391 0.400213 AGATTTCACACTTGGGCCGA 59.600 50.000 0.00 0.00 0.00 5.54
3778 5392 0.804989 GAGATTTCACACTTGGGCCG 59.195 55.000 0.00 0.00 0.00 6.13
3779 5393 1.909700 TGAGATTTCACACTTGGGCC 58.090 50.000 0.00 0.00 0.00 5.80
3780 5394 5.841957 AATATGAGATTTCACACTTGGGC 57.158 39.130 0.00 0.00 35.83 5.36
3781 5395 7.395190 TCAAATATGAGATTTCACACTTGGG 57.605 36.000 0.00 0.00 35.83 4.12
3782 5396 9.865321 ATTTCAAATATGAGATTTCACACTTGG 57.135 29.630 0.00 0.00 36.78 3.61
3786 5400 9.294030 GGTGATTTCAAATATGAGATTTCACAC 57.706 33.333 15.06 0.00 36.78 3.82
3787 5401 9.022884 TGGTGATTTCAAATATGAGATTTCACA 57.977 29.630 15.06 0.00 36.78 3.58
3788 5402 9.294030 GTGGTGATTTCAAATATGAGATTTCAC 57.706 33.333 0.00 0.00 36.78 3.18
3789 5403 9.022884 TGTGGTGATTTCAAATATGAGATTTCA 57.977 29.630 0.00 0.00 36.78 2.69
3790 5404 9.294030 GTGTGGTGATTTCAAATATGAGATTTC 57.706 33.333 0.00 0.00 36.78 2.17
3791 5405 9.028284 AGTGTGGTGATTTCAAATATGAGATTT 57.972 29.630 0.00 0.00 36.78 2.17
3792 5406 8.585471 AGTGTGGTGATTTCAAATATGAGATT 57.415 30.769 0.00 0.00 36.78 2.40
3793 5407 7.284034 GGAGTGTGGTGATTTCAAATATGAGAT 59.716 37.037 0.00 0.00 36.78 2.75
3794 5408 6.599244 GGAGTGTGGTGATTTCAAATATGAGA 59.401 38.462 0.00 0.00 36.78 3.27
3795 5409 6.375174 TGGAGTGTGGTGATTTCAAATATGAG 59.625 38.462 0.00 0.00 36.78 2.90
3796 5410 6.244654 TGGAGTGTGGTGATTTCAAATATGA 58.755 36.000 0.00 0.00 0.00 2.15
3797 5411 6.513806 TGGAGTGTGGTGATTTCAAATATG 57.486 37.500 0.00 0.00 0.00 1.78
3798 5412 6.891361 TGATGGAGTGTGGTGATTTCAAATAT 59.109 34.615 0.00 0.00 0.00 1.28
3802 5416 4.097551 TGATGGAGTGTGGTGATTTCAA 57.902 40.909 0.00 0.00 0.00 2.69
3811 5425 3.555527 ACATGAGATGATGGAGTGTGG 57.444 47.619 0.00 0.00 0.00 4.17
3900 5514 1.629013 TTGAGCTGCATTCGACGTAG 58.371 50.000 1.02 0.00 0.00 3.51
3951 5565 6.122277 CAGGGATTTATGTAAGCCTTCAGAA 58.878 40.000 0.00 0.00 42.13 3.02
3970 5584 4.223556 TGCACCGAAAATATAACAGGGA 57.776 40.909 0.00 0.00 0.00 4.20
3985 5606 1.656652 AGAATTCGAAGGATGCACCG 58.343 50.000 3.35 0.00 44.74 4.94
3987 5608 7.715265 TTAATCTAGAATTCGAAGGATGCAC 57.285 36.000 3.35 0.00 0.00 4.57
3997 5620 8.894409 TGCACAACAATTTAATCTAGAATTCG 57.106 30.769 0.00 0.00 0.00 3.34
4005 5628 7.660112 TGACATTCTGCACAACAATTTAATCT 58.340 30.769 0.00 0.00 0.00 2.40
4010 5633 5.006941 GCTTTGACATTCTGCACAACAATTT 59.993 36.000 0.00 0.00 0.00 1.82
4015 5638 3.047796 CAGCTTTGACATTCTGCACAAC 58.952 45.455 0.00 0.00 0.00 3.32
4056 5679 2.906389 TGTTGGAGGCTTGATCACTACT 59.094 45.455 0.00 0.00 0.00 2.57
4292 5923 8.250143 ACCTAAAAAGTGAAATTCAGTCCATT 57.750 30.769 3.54 3.05 0.00 3.16
4296 5927 7.043391 GCACAACCTAAAAAGTGAAATTCAGTC 60.043 37.037 3.54 0.00 33.99 3.51
4306 5937 6.200097 GGTAAACATGCACAACCTAAAAAGTG 59.800 38.462 0.00 0.00 35.19 3.16
4328 5959 2.820787 CGGTTTTACCAAATGGCAGGTA 59.179 45.455 0.00 0.28 38.47 3.08
4332 5963 2.494073 GGATCGGTTTTACCAAATGGCA 59.506 45.455 0.00 0.00 38.47 4.92
4428 6059 1.905215 ACATGGGAGTTCAGAGTCCAG 59.095 52.381 0.00 0.00 45.69 3.86
4448 6079 1.269778 CCGATTCGCATAGCTCCAGAA 60.270 52.381 0.00 0.00 0.00 3.02
4601 6290 2.099756 GCTTCCGCCTTGCTCAAATAAT 59.900 45.455 0.00 0.00 0.00 1.28
4651 6340 7.981225 ACTTTAGTGACCTAAAACGTCTTAACA 59.019 33.333 0.00 0.00 41.41 2.41
4684 6374 7.909641 TCTGTAAACTTTTGTAAGGCGTTTTAC 59.090 33.333 0.00 0.00 35.61 2.01
4750 6443 9.040939 CCGATTACAAAACATGAGATATACACA 57.959 33.333 0.00 0.00 0.00 3.72
4751 6444 8.009974 GCCGATTACAAAACATGAGATATACAC 58.990 37.037 0.00 0.00 0.00 2.90
4788 6481 7.948034 ATGGACCATAGTAATCTAGCTCTAC 57.052 40.000 4.75 0.00 0.00 2.59
4809 6506 5.868801 CCTAATTTGTTACAAGCACCAATGG 59.131 40.000 0.00 0.00 0.00 3.16
4832 6530 3.572255 TCAAGCTGTACCAAAACATTCCC 59.428 43.478 0.00 0.00 0.00 3.97
4872 6570 5.335661 GGAAGCTAATCTTTTGGAGCGAAAA 60.336 40.000 0.00 0.00 39.96 2.29
4877 6578 4.946772 AGAAGGAAGCTAATCTTTTGGAGC 59.053 41.667 0.00 0.00 34.56 4.70
4878 6579 5.588246 GGAGAAGGAAGCTAATCTTTTGGAG 59.412 44.000 0.00 0.00 34.56 3.86
4888 6589 3.449018 CAGTAGCAGGAGAAGGAAGCTAA 59.551 47.826 0.00 0.00 39.26 3.09
4890 6591 1.830477 CAGTAGCAGGAGAAGGAAGCT 59.170 52.381 0.00 0.00 39.22 3.74
4905 6606 6.977502 CCTGACTCACAAGATACATTCAGTAG 59.022 42.308 0.00 0.00 35.85 2.57
4925 6626 7.440523 AAAAACACATGATTCTACTCCTGAC 57.559 36.000 0.00 0.00 0.00 3.51
4968 6686 1.949525 CTTTGTGAGTGACCAACCCTG 59.050 52.381 0.00 0.00 0.00 4.45
4969 6687 1.564348 ACTTTGTGAGTGACCAACCCT 59.436 47.619 0.00 0.00 37.17 4.34
4974 6692 3.342377 TTGTGACTTTGTGAGTGACCA 57.658 42.857 0.00 0.00 41.22 4.02
5053 6771 4.965858 GAGATCTCGTCGCCGGCG 62.966 72.222 42.13 42.13 41.35 6.46
5054 6772 4.965858 CGAGATCTCGTCGCCGGC 62.966 72.222 32.23 19.07 46.99 6.13
5057 6775 4.965858 CGCCGAGATCTCGTCGCC 62.966 72.222 35.85 22.33 46.74 5.54
5074 6792 3.426568 GTGCTGCTCCAACGGCTC 61.427 66.667 0.00 0.00 42.69 4.70
5077 6795 3.414700 GACGTGCTGCTCCAACGG 61.415 66.667 13.57 0.00 0.00 4.44
5078 6796 3.767230 CGACGTGCTGCTCCAACG 61.767 66.667 8.44 8.44 0.00 4.10
5079 6797 2.159272 GAACGACGTGCTGCTCCAAC 62.159 60.000 0.00 0.00 0.00 3.77
5080 6798 1.954146 GAACGACGTGCTGCTCCAA 60.954 57.895 0.00 0.00 0.00 3.53
5081 6799 2.355837 GAACGACGTGCTGCTCCA 60.356 61.111 0.00 0.00 0.00 3.86
5082 6800 3.112709 GGAACGACGTGCTGCTCC 61.113 66.667 5.82 2.74 0.00 4.70
5083 6801 2.355837 TGGAACGACGTGCTGCTC 60.356 61.111 5.82 0.00 0.00 4.26
5084 6802 2.661866 GTGGAACGACGTGCTGCT 60.662 61.111 5.82 0.00 0.00 4.24
5085 6803 2.317609 ATGTGGAACGACGTGCTGC 61.318 57.895 5.82 0.00 42.39 5.25
5086 6804 1.221466 ACATGTGGAACGACGTGCTG 61.221 55.000 5.82 0.00 42.39 4.41
5087 6805 0.944311 GACATGTGGAACGACGTGCT 60.944 55.000 1.15 0.00 42.39 4.40
5088 6806 1.491563 GACATGTGGAACGACGTGC 59.508 57.895 1.15 0.00 42.39 5.34
5089 6807 0.598942 TGGACATGTGGAACGACGTG 60.599 55.000 1.15 7.43 42.39 4.49
5090 6808 0.599204 GTGGACATGTGGAACGACGT 60.599 55.000 1.15 0.00 42.39 4.34
5091 6809 1.289109 GGTGGACATGTGGAACGACG 61.289 60.000 1.15 0.00 42.39 5.12
5092 6810 1.289109 CGGTGGACATGTGGAACGAC 61.289 60.000 1.15 0.00 42.39 4.34
5093 6811 1.005512 CGGTGGACATGTGGAACGA 60.006 57.895 1.15 0.00 42.39 3.85
5094 6812 2.032634 CCGGTGGACATGTGGAACG 61.033 63.158 1.15 3.28 42.39 3.95
5095 6813 2.332654 GCCGGTGGACATGTGGAAC 61.333 63.158 1.15 0.00 37.35 3.62
5096 6814 2.033448 GCCGGTGGACATGTGGAA 59.967 61.111 1.15 0.00 0.00 3.53
5097 6815 4.028490 GGCCGGTGGACATGTGGA 62.028 66.667 1.15 0.00 0.00 4.02
5123 6841 1.439353 AACGACTGCTTGCACTGGTG 61.439 55.000 0.00 0.00 0.00 4.17
5124 6842 1.153168 AACGACTGCTTGCACTGGT 60.153 52.632 0.00 0.00 0.00 4.00
5125 6843 1.280746 CAACGACTGCTTGCACTGG 59.719 57.895 0.00 0.00 0.00 4.00
5126 6844 4.907946 CAACGACTGCTTGCACTG 57.092 55.556 0.00 0.00 0.00 3.66
5161 6879 1.153823 AGGCGGAAGATCGACAACG 60.154 57.895 0.00 0.00 41.34 4.10
5162 6880 1.696832 GCAGGCGGAAGATCGACAAC 61.697 60.000 0.00 0.00 41.34 3.32
5163 6881 1.447838 GCAGGCGGAAGATCGACAA 60.448 57.895 0.00 0.00 41.34 3.18
5164 6882 2.184322 GCAGGCGGAAGATCGACA 59.816 61.111 0.00 0.00 41.34 4.35
5165 6883 2.586357 GGCAGGCGGAAGATCGAC 60.586 66.667 0.00 0.00 38.69 4.20
5166 6884 4.207281 CGGCAGGCGGAAGATCGA 62.207 66.667 8.89 0.00 0.00 3.59
5168 6886 2.666596 ATTCCGGCAGGCGGAAGATC 62.667 60.000 42.50 4.62 46.81 2.75
5169 6887 2.746375 ATTCCGGCAGGCGGAAGAT 61.746 57.895 42.50 30.53 46.81 2.40
5170 6888 3.399181 ATTCCGGCAGGCGGAAGA 61.399 61.111 42.50 29.28 46.81 2.87
5171 6889 3.204827 CATTCCGGCAGGCGGAAG 61.205 66.667 42.50 32.41 46.81 3.46
5180 6898 3.508840 CCGAACTGGCATTCCGGC 61.509 66.667 0.00 0.00 42.73 6.13
5181 6899 2.824041 CCCGAACTGGCATTCCGG 60.824 66.667 12.64 12.64 44.58 5.14
5182 6900 2.046314 ACCCGAACTGGCATTCCG 60.046 61.111 0.00 0.00 35.87 4.30
5183 6901 2.046285 CCACCCGAACTGGCATTCC 61.046 63.158 0.00 0.00 35.87 3.01
5184 6902 3.590824 CCACCCGAACTGGCATTC 58.409 61.111 0.00 0.00 35.87 2.67
5207 6925 3.677648 GCCATGATGATGCGCCCC 61.678 66.667 4.18 0.00 0.00 5.80
5210 6928 1.007734 CAAGGCCATGATGATGCGC 60.008 57.895 5.01 0.00 0.00 6.09
5287 7005 2.041405 GGGTCCAGAGGGAGGAGG 60.041 72.222 0.00 0.00 46.12 4.30
5291 7009 1.075600 GAGGAGGGTCCAGAGGGAG 60.076 68.421 0.00 0.00 46.12 4.30
5294 7012 2.063378 GCTGAGGAGGGTCCAGAGG 61.063 68.421 0.00 0.00 39.61 3.69
5300 7018 2.039624 TGGGAGCTGAGGAGGGTC 59.960 66.667 0.00 0.00 0.00 4.46
5303 7021 3.086600 GGGTGGGAGCTGAGGAGG 61.087 72.222 0.00 0.00 0.00 4.30
5305 7023 3.992641 TCGGGTGGGAGCTGAGGA 61.993 66.667 0.00 0.00 0.00 3.71
5371 7093 1.968017 TGGTTCGACGGCGTCTACT 60.968 57.895 33.90 1.88 38.98 2.57
5376 7098 4.695231 CTCGTGGTTCGACGGCGT 62.695 66.667 14.65 14.65 44.01 5.68
5405 7127 3.984200 GACCTACACGCCGAGCCAC 62.984 68.421 0.00 0.00 0.00 5.01
5453 7175 2.203070 ATCGCCCAATGCCGAGAC 60.203 61.111 1.38 0.00 36.24 3.36
5490 7212 4.813526 CGGAGTCAGACGCGTCGG 62.814 72.222 31.56 30.68 34.09 4.79
5512 7234 1.513158 CTCACGGACTTCGGCATCT 59.487 57.895 0.00 0.00 44.45 2.90
5515 7237 2.504274 AACCTCACGGACTTCGGCA 61.504 57.895 0.00 0.00 44.45 5.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.