Multiple sequence alignment - TraesCS7D01G183200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G183200 chr7D 100.000 3053 0 0 1 3053 136534596 136537648 0.000000e+00 5638.0
1 TraesCS7D01G183200 chr7D 92.727 660 24 5 1622 2277 136571706 136572345 0.000000e+00 931.0
2 TraesCS7D01G183200 chr7D 94.757 267 12 2 2788 3053 560002940 560003205 6.090000e-112 414.0
3 TraesCS7D01G183200 chr7D 94.007 267 15 1 2788 3053 309695319 309695053 1.320000e-108 403.0
4 TraesCS7D01G183200 chr7D 87.342 158 17 2 2307 2461 136578316 136578473 8.700000e-41 178.0
5 TraesCS7D01G183200 chr7B 92.605 1812 70 28 707 2473 99594126 99592334 0.000000e+00 2545.0
6 TraesCS7D01G183200 chr7B 92.677 437 26 2 264 699 99594750 99594319 2.580000e-175 625.0
7 TraesCS7D01G183200 chr7B 89.412 170 14 3 768 934 99594920 99594752 8.580000e-51 211.0
8 TraesCS7D01G183200 chr7B 81.356 118 22 0 194 311 361171133 361171016 2.510000e-16 97.1
9 TraesCS7D01G183200 chr7B 91.176 68 5 1 707 773 99600805 99600738 1.170000e-14 91.6
10 TraesCS7D01G183200 chr7B 97.500 40 0 1 684 723 99594173 99594135 1.960000e-07 67.6
11 TraesCS7D01G183200 chr7A 92.063 1575 62 25 707 2243 136282805 136284354 0.000000e+00 2158.0
12 TraesCS7D01G183200 chr7A 97.143 105 3 0 619 723 136282672 136282776 8.700000e-41 178.0
13 TraesCS7D01G183200 chr2D 92.883 281 18 2 2774 3053 341935016 341934737 1.020000e-109 407.0
14 TraesCS7D01G183200 chr2D 93.985 266 15 1 2789 3053 451782203 451781938 4.740000e-108 401.0
15 TraesCS7D01G183200 chr2D 78.772 391 79 4 1534 1921 188882362 188882751 3.020000e-65 259.0
16 TraesCS7D01G183200 chr2D 78.182 220 40 6 1049 1264 188881903 188882118 1.910000e-27 134.0
17 TraesCS7D01G183200 chr2D 100.000 28 0 0 336 363 407991513 407991540 6.000000e-03 52.8
18 TraesCS7D01G183200 chr4D 94.656 262 13 1 2793 3053 470518180 470517919 3.670000e-109 405.0
19 TraesCS7D01G183200 chr4D 83.237 173 25 4 146 316 455695806 455695636 4.080000e-34 156.0
20 TraesCS7D01G183200 chr6D 94.007 267 15 1 2788 3053 175240989 175240723 1.320000e-108 403.0
21 TraesCS7D01G183200 chr6D 94.007 267 14 2 2788 3053 436212058 436212323 1.320000e-108 403.0
22 TraesCS7D01G183200 chr6D 82.119 302 51 2 2474 2774 293497983 293498282 3.910000e-64 255.0
23 TraesCS7D01G183200 chr3D 94.007 267 15 1 2788 3053 98082481 98082747 1.320000e-108 403.0
24 TraesCS7D01G183200 chr3D 93.633 267 16 1 2788 3053 166226726 166226992 6.130000e-107 398.0
25 TraesCS7D01G183200 chr3D 82.060 301 47 6 2472 2769 133535956 133536252 1.820000e-62 250.0
26 TraesCS7D01G183200 chr5D 84.211 304 39 6 2465 2766 490521699 490521403 1.390000e-73 287.0
27 TraesCS7D01G183200 chr5D 88.285 239 25 3 2537 2774 482525565 482525329 1.790000e-72 283.0
28 TraesCS7D01G183200 chr5D 82.877 292 47 3 2474 2765 244214959 244214671 3.020000e-65 259.0
29 TraesCS7D01G183200 chr2A 78.973 409 84 2 1541 1948 203002547 203002954 8.340000e-71 278.0
30 TraesCS7D01G183200 chr2A 81.150 313 57 2 2474 2785 421604025 421603714 1.820000e-62 250.0
31 TraesCS7D01G183200 chr2A 84.559 136 21 0 181 316 290158375 290158240 5.310000e-28 135.0
32 TraesCS7D01G183200 chr2A 83.212 137 23 0 181 317 713341235 713341099 3.200000e-25 126.0
33 TraesCS7D01G183200 chr2A 100.000 28 0 0 336 363 575703566 575703593 6.000000e-03 52.8
34 TraesCS7D01G183200 chr2A 100.000 28 0 0 336 363 575721928 575721955 6.000000e-03 52.8
35 TraesCS7D01G183200 chr1D 82.943 299 43 8 2474 2766 326249079 326248783 2.330000e-66 263.0
36 TraesCS7D01G183200 chr4B 82.712 295 48 3 2472 2763 398948770 398948476 3.020000e-65 259.0
37 TraesCS7D01G183200 chr4B 82.373 295 49 3 2472 2763 398951185 398950891 1.400000e-63 254.0
38 TraesCS7D01G183200 chr1A 88.945 199 21 1 118 316 51980345 51980542 8.460000e-61 244.0
39 TraesCS7D01G183200 chr1A 92.800 125 9 0 1 125 51980192 51980316 6.720000e-42 182.0
40 TraesCS7D01G183200 chr1A 84.848 99 10 2 509 602 513679593 513679691 9.010000e-16 95.3
41 TraesCS7D01G183200 chr5A 96.000 125 5 0 1 125 610436205 610436081 1.440000e-48 204.0
42 TraesCS7D01G183200 chr5A 84.483 174 23 4 427 598 19657907 19658078 5.240000e-38 169.0
43 TraesCS7D01G183200 chrUn 83.838 198 28 3 120 316 74540114 74540308 5.200000e-43 185.0
44 TraesCS7D01G183200 chr3A 100.000 45 0 0 76 120 544816843 544816887 1.950000e-12 84.2
45 TraesCS7D01G183200 chr5B 93.617 47 3 0 317 363 527159862 527159816 1.520000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G183200 chr7D 136534596 136537648 3052 False 5638.00 5638 100.0000 1 3053 1 chr7D.!!$F1 3052
1 TraesCS7D01G183200 chr7D 136571706 136572345 639 False 931.00 931 92.7270 1622 2277 1 chr7D.!!$F2 655
2 TraesCS7D01G183200 chr7B 99592334 99594920 2586 True 862.15 2545 93.0485 264 2473 4 chr7B.!!$R3 2209
3 TraesCS7D01G183200 chr7A 136282672 136284354 1682 False 1168.00 2158 94.6030 619 2243 2 chr7A.!!$F1 1624
4 TraesCS7D01G183200 chr4B 398948476 398951185 2709 True 256.50 259 82.5425 2472 2763 2 chr4B.!!$R1 291

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
28 29 0.029834 ATAGGTACGCGTACTTGCCG 59.970 55.0 39.1 0.0 36.36 5.69 F
815 1022 0.179020 TTCAGCACAACCCACCTCTG 60.179 55.0 0.0 0.0 0.00 3.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1489 1740 2.433994 GCAGGAGCTCCAGGGAGAG 61.434 68.421 33.90 14.79 44.53 3.20 R
2799 3090 0.027979 CCTTTGGCATATGTCGCACG 59.972 55.000 2.28 0.00 0.00 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.404507 GGTATTCGAATAGGTACGCGTA 57.595 45.455 18.03 16.41 0.00 4.42
22 23 4.151798 GGTATTCGAATAGGTACGCGTAC 58.848 47.826 35.42 35.42 35.40 3.67
23 24 4.083802 GGTATTCGAATAGGTACGCGTACT 60.084 45.833 39.10 28.89 36.36 2.73
25 26 3.323729 TCGAATAGGTACGCGTACTTG 57.676 47.619 39.10 26.48 36.36 3.16
26 27 1.777461 CGAATAGGTACGCGTACTTGC 59.223 52.381 39.10 26.78 36.36 4.01
27 28 2.122564 GAATAGGTACGCGTACTTGCC 58.877 52.381 39.10 27.19 36.36 4.52
28 29 0.029834 ATAGGTACGCGTACTTGCCG 59.970 55.000 39.10 0.00 36.36 5.69
29 30 1.992233 TAGGTACGCGTACTTGCCGG 61.992 60.000 39.10 0.00 36.36 6.13
30 31 3.548231 GTACGCGTACTTGCCGGC 61.548 66.667 35.66 22.73 33.45 6.13
31 32 4.053526 TACGCGTACTTGCCGGCA 62.054 61.111 29.03 29.03 0.00 5.69
32 33 3.975083 TACGCGTACTTGCCGGCAG 62.975 63.158 30.75 24.51 0.00 4.85
34 35 3.788766 GCGTACTTGCCGGCAGTG 61.789 66.667 30.75 26.78 0.00 3.66
35 36 3.118454 CGTACTTGCCGGCAGTGG 61.118 66.667 30.75 24.15 0.00 4.00
61 62 2.183409 AGCTATTTGGCTGTTGGCG 58.817 52.632 0.00 0.00 41.43 5.69
64 65 0.179156 CTATTTGGCTGTTGGCGCTG 60.179 55.000 7.64 0.00 42.94 5.18
65 66 2.211619 TATTTGGCTGTTGGCGCTGC 62.212 55.000 7.64 4.35 42.94 5.25
75 76 2.439156 GGCGCTGCCCATTCTTCT 60.439 61.111 7.64 0.00 44.06 2.85
76 77 1.153168 GGCGCTGCCCATTCTTCTA 60.153 57.895 7.64 0.00 44.06 2.10
78 79 1.440145 GCGCTGCCCATTCTTCTACC 61.440 60.000 0.00 0.00 0.00 3.18
80 81 1.407437 CGCTGCCCATTCTTCTACCTT 60.407 52.381 0.00 0.00 0.00 3.50
81 82 2.019984 GCTGCCCATTCTTCTACCTTG 58.980 52.381 0.00 0.00 0.00 3.61
83 84 1.354031 TGCCCATTCTTCTACCTTGCA 59.646 47.619 0.00 0.00 0.00 4.08
84 85 2.224992 TGCCCATTCTTCTACCTTGCAA 60.225 45.455 0.00 0.00 0.00 4.08
87 88 2.755103 CCATTCTTCTACCTTGCAACCC 59.245 50.000 0.00 0.00 0.00 4.11
89 90 3.876309 TTCTTCTACCTTGCAACCCTT 57.124 42.857 0.00 0.00 0.00 3.95
90 91 3.876309 TCTTCTACCTTGCAACCCTTT 57.124 42.857 0.00 0.00 0.00 3.11
91 92 3.751518 TCTTCTACCTTGCAACCCTTTC 58.248 45.455 0.00 0.00 0.00 2.62
92 93 3.394606 TCTTCTACCTTGCAACCCTTTCT 59.605 43.478 0.00 0.00 0.00 2.52
93 94 3.876309 TCTACCTTGCAACCCTTTCTT 57.124 42.857 0.00 0.00 0.00 2.52
94 95 4.178956 TCTACCTTGCAACCCTTTCTTT 57.821 40.909 0.00 0.00 0.00 2.52
96 97 2.466846 ACCTTGCAACCCTTTCTTTGT 58.533 42.857 0.00 0.00 0.00 2.83
97 98 2.168313 ACCTTGCAACCCTTTCTTTGTG 59.832 45.455 0.00 0.00 0.00 3.33
98 99 2.168313 CCTTGCAACCCTTTCTTTGTGT 59.832 45.455 0.00 0.00 0.00 3.72
99 100 3.447742 CTTGCAACCCTTTCTTTGTGTC 58.552 45.455 0.00 0.00 0.00 3.67
100 101 2.733956 TGCAACCCTTTCTTTGTGTCT 58.266 42.857 0.00 0.00 0.00 3.41
101 102 2.687935 TGCAACCCTTTCTTTGTGTCTC 59.312 45.455 0.00 0.00 0.00 3.36
102 103 2.687935 GCAACCCTTTCTTTGTGTCTCA 59.312 45.455 0.00 0.00 0.00 3.27
103 104 3.130340 GCAACCCTTTCTTTGTGTCTCAA 59.870 43.478 0.00 0.00 0.00 3.02
104 105 4.734695 GCAACCCTTTCTTTGTGTCTCAAG 60.735 45.833 0.00 0.00 37.35 3.02
105 106 4.503714 ACCCTTTCTTTGTGTCTCAAGA 57.496 40.909 0.00 0.00 37.35 3.02
106 107 4.855340 ACCCTTTCTTTGTGTCTCAAGAA 58.145 39.130 0.00 0.00 37.35 2.52
107 108 4.640647 ACCCTTTCTTTGTGTCTCAAGAAC 59.359 41.667 0.00 0.00 37.35 3.01
108 109 4.640201 CCCTTTCTTTGTGTCTCAAGAACA 59.360 41.667 0.00 0.00 37.35 3.18
109 110 5.449177 CCCTTTCTTTGTGTCTCAAGAACAC 60.449 44.000 0.00 0.00 37.35 3.32
110 111 5.123820 CCTTTCTTTGTGTCTCAAGAACACA 59.876 40.000 5.05 5.05 41.86 3.72
111 112 6.183360 CCTTTCTTTGTGTCTCAAGAACACAT 60.183 38.462 9.62 0.00 42.86 3.21
112 113 7.012327 CCTTTCTTTGTGTCTCAAGAACACATA 59.988 37.037 9.62 4.94 42.86 2.29
114 115 5.758296 TCTTTGTGTCTCAAGAACACATACC 59.242 40.000 9.62 0.00 42.86 2.73
115 116 4.681074 TGTGTCTCAAGAACACATACCA 57.319 40.909 5.05 0.00 39.16 3.25
116 117 5.227569 TGTGTCTCAAGAACACATACCAT 57.772 39.130 5.05 0.00 39.16 3.55
118 119 4.393062 GTGTCTCAAGAACACATACCATGG 59.607 45.833 11.19 11.19 34.77 3.66
119 120 3.941483 GTCTCAAGAACACATACCATGGG 59.059 47.826 18.09 0.00 40.30 4.00
131 132 6.706295 CACATACCATGGGTAAAATTTTGGT 58.294 36.000 18.09 13.41 41.85 3.67
132 133 6.816140 CACATACCATGGGTAAAATTTTGGTC 59.184 38.462 18.09 4.24 41.85 4.02
133 134 6.498651 ACATACCATGGGTAAAATTTTGGTCA 59.501 34.615 18.09 8.63 41.85 4.02
134 135 7.181845 ACATACCATGGGTAAAATTTTGGTCAT 59.818 33.333 18.09 10.34 41.85 3.06
135 136 8.700051 CATACCATGGGTAAAATTTTGGTCATA 58.300 33.333 18.09 0.00 41.85 2.15
136 137 7.747809 ACCATGGGTAAAATTTTGGTCATAT 57.252 32.000 18.09 3.93 32.08 1.78
138 139 6.482973 CCATGGGTAAAATTTTGGTCATATGC 59.517 38.462 13.76 0.00 0.00 3.14
140 141 5.104735 TGGGTAAAATTTTGGTCATATGCCC 60.105 40.000 13.76 7.47 0.00 5.36
147 148 4.371624 TTTGGTCATATGCCCTATGAGG 57.628 45.455 4.12 0.00 45.38 3.86
159 160 3.425162 CCTATGAGGGGCAAATAGGTC 57.575 52.381 0.00 0.00 38.66 3.85
160 161 2.982488 CCTATGAGGGGCAAATAGGTCT 59.018 50.000 0.00 0.00 38.66 3.85
161 162 3.395941 CCTATGAGGGGCAAATAGGTCTT 59.604 47.826 0.00 0.00 38.66 3.01
162 163 3.584733 ATGAGGGGCAAATAGGTCTTC 57.415 47.619 0.00 0.00 0.00 2.87
163 164 2.562296 TGAGGGGCAAATAGGTCTTCT 58.438 47.619 0.00 0.00 0.00 2.85
164 165 2.505819 TGAGGGGCAAATAGGTCTTCTC 59.494 50.000 0.00 0.00 0.00 2.87
165 166 2.505819 GAGGGGCAAATAGGTCTTCTCA 59.494 50.000 0.00 0.00 0.00 3.27
167 168 4.307259 AGGGGCAAATAGGTCTTCTCATA 58.693 43.478 0.00 0.00 0.00 2.15
168 169 4.916424 AGGGGCAAATAGGTCTTCTCATAT 59.084 41.667 0.00 0.00 0.00 1.78
169 170 6.091555 AGGGGCAAATAGGTCTTCTCATATA 58.908 40.000 0.00 0.00 0.00 0.86
170 171 6.737608 AGGGGCAAATAGGTCTTCTCATATAT 59.262 38.462 0.00 0.00 0.00 0.86
172 173 7.311297 GGGGCAAATAGGTCTTCTCATATATGA 60.311 40.741 14.64 14.64 35.16 2.15
173 174 8.270744 GGGCAAATAGGTCTTCTCATATATGAT 58.729 37.037 15.71 2.23 36.02 2.45
174 175 9.678260 GGCAAATAGGTCTTCTCATATATGATT 57.322 33.333 15.71 1.67 36.02 2.57
182 183 8.926710 GGTCTTCTCATATATGATTTAACACCG 58.073 37.037 15.71 1.66 36.02 4.94
183 184 9.477484 GTCTTCTCATATATGATTTAACACCGT 57.523 33.333 15.71 0.00 36.02 4.83
195 196 9.804758 ATGATTTAACACCGTTAAAGTTTGAAA 57.195 25.926 15.07 0.00 0.00 2.69
196 197 9.804758 TGATTTAACACCGTTAAAGTTTGAAAT 57.195 25.926 15.07 0.63 0.00 2.17
198 199 7.988904 TTAACACCGTTAAAGTTTGAAATGG 57.011 32.000 7.54 7.54 35.74 3.16
199 200 5.838531 ACACCGTTAAAGTTTGAAATGGA 57.161 34.783 13.91 0.00 34.12 3.41
200 201 5.584442 ACACCGTTAAAGTTTGAAATGGAC 58.416 37.500 13.91 0.00 34.12 4.02
201 202 4.673311 CACCGTTAAAGTTTGAAATGGACG 59.327 41.667 13.91 6.20 34.12 4.79
202 203 4.575645 ACCGTTAAAGTTTGAAATGGACGA 59.424 37.500 13.91 0.00 34.12 4.20
203 204 5.066246 ACCGTTAAAGTTTGAAATGGACGAA 59.934 36.000 13.91 0.00 34.12 3.85
204 205 5.972382 CCGTTAAAGTTTGAAATGGACGAAA 59.028 36.000 0.00 0.00 32.04 3.46
205 206 6.141685 CCGTTAAAGTTTGAAATGGACGAAAG 59.858 38.462 0.00 0.00 32.04 2.62
247 248 7.645058 AATTTAGACATGGTGTTAGATTGGG 57.355 36.000 0.00 0.00 0.00 4.12
248 249 6.381498 TTTAGACATGGTGTTAGATTGGGA 57.619 37.500 0.00 0.00 0.00 4.37
249 250 4.927267 AGACATGGTGTTAGATTGGGAA 57.073 40.909 0.00 0.00 0.00 3.97
250 251 4.848357 AGACATGGTGTTAGATTGGGAAG 58.152 43.478 0.00 0.00 0.00 3.46
251 252 4.536090 AGACATGGTGTTAGATTGGGAAGA 59.464 41.667 0.00 0.00 0.00 2.87
252 253 5.014123 AGACATGGTGTTAGATTGGGAAGAA 59.986 40.000 0.00 0.00 0.00 2.52
253 254 5.640147 ACATGGTGTTAGATTGGGAAGAAA 58.360 37.500 0.00 0.00 0.00 2.52
254 255 6.074648 ACATGGTGTTAGATTGGGAAGAAAA 58.925 36.000 0.00 0.00 0.00 2.29
255 256 6.553100 ACATGGTGTTAGATTGGGAAGAAAAA 59.447 34.615 0.00 0.00 0.00 1.94
256 257 6.399639 TGGTGTTAGATTGGGAAGAAAAAC 57.600 37.500 0.00 0.00 0.00 2.43
257 258 5.894393 TGGTGTTAGATTGGGAAGAAAAACA 59.106 36.000 0.00 0.00 0.00 2.83
258 259 6.381420 TGGTGTTAGATTGGGAAGAAAAACAA 59.619 34.615 0.00 0.00 0.00 2.83
259 260 7.070571 TGGTGTTAGATTGGGAAGAAAAACAAT 59.929 33.333 0.00 0.00 36.35 2.71
260 261 7.931407 GGTGTTAGATTGGGAAGAAAAACAATT 59.069 33.333 0.00 0.00 34.01 2.32
261 262 8.978539 GTGTTAGATTGGGAAGAAAAACAATTC 58.021 33.333 0.00 0.00 34.01 2.17
262 263 8.923270 TGTTAGATTGGGAAGAAAAACAATTCT 58.077 29.630 0.00 0.00 41.34 2.40
265 266 8.712228 AGATTGGGAAGAAAAACAATTCTAGT 57.288 30.769 0.00 0.00 38.69 2.57
266 267 8.579863 AGATTGGGAAGAAAAACAATTCTAGTG 58.420 33.333 0.00 0.00 38.69 2.74
267 268 7.654022 TTGGGAAGAAAAACAATTCTAGTGT 57.346 32.000 0.00 0.00 38.69 3.55
370 371 1.056660 AGTTGTCCATGTCCTTCGGT 58.943 50.000 0.00 0.00 0.00 4.69
397 398 4.062293 CCAGTTTCACTAACACCGATTGA 58.938 43.478 0.00 0.00 39.30 2.57
420 421 2.360949 ATCTGCATCGAGCCGACTGG 62.361 60.000 0.00 0.00 44.83 4.00
442 443 2.668279 GCAATCGGCTTTACCAACACTG 60.668 50.000 0.00 0.00 39.03 3.66
516 518 2.223249 CGTTGCCAATTAGTCCAATCGG 60.223 50.000 0.00 0.00 0.00 4.18
750 957 2.579738 GTCAAGAGGGGGTCTCGC 59.420 66.667 0.00 0.00 46.82 5.03
751 958 1.985116 GTCAAGAGGGGGTCTCGCT 60.985 63.158 0.00 0.00 46.82 4.93
815 1022 0.179020 TTCAGCACAACCCACCTCTG 60.179 55.000 0.00 0.00 0.00 3.35
817 1024 2.985847 GCACAACCCACCTCTGCC 60.986 66.667 0.00 0.00 0.00 4.85
818 1025 2.282462 CACAACCCACCTCTGCCC 60.282 66.667 0.00 0.00 0.00 5.36
819 1026 3.580319 ACAACCCACCTCTGCCCC 61.580 66.667 0.00 0.00 0.00 5.80
820 1027 4.366684 CAACCCACCTCTGCCCCC 62.367 72.222 0.00 0.00 0.00 5.40
952 1186 3.443925 CACAGCTCGAGAGGCCGA 61.444 66.667 18.75 0.00 37.03 5.54
954 1188 3.443925 CAGCTCGAGAGGCCGACA 61.444 66.667 18.75 0.00 34.56 4.35
955 1189 2.676822 AGCTCGAGAGGCCGACAA 60.677 61.111 18.75 0.00 34.56 3.18
963 1202 0.962356 AGAGGCCGACAAAGCATTGG 60.962 55.000 6.62 0.00 41.01 3.16
1355 1606 2.897350 CCAAGATCCCGCTTCGGC 60.897 66.667 0.00 0.00 46.86 5.54
1356 1607 2.187946 CAAGATCCCGCTTCGGCT 59.812 61.111 0.00 0.00 46.86 5.52
1357 1608 1.450312 CAAGATCCCGCTTCGGCTT 60.450 57.895 0.00 0.00 46.86 4.35
1358 1609 1.153349 AAGATCCCGCTTCGGCTTC 60.153 57.895 0.00 0.00 46.86 3.86
1359 1610 2.907897 AAGATCCCGCTTCGGCTTCG 62.908 60.000 0.00 0.00 46.86 3.79
1360 1611 4.530857 ATCCCGCTTCGGCTTCGG 62.531 66.667 0.00 0.00 46.86 4.30
1393 1644 2.278857 CGGCCAAGATCCTCGTCG 60.279 66.667 2.24 0.00 0.00 5.12
1489 1740 1.067425 TGTACACCGTGCACATCTACC 60.067 52.381 18.64 0.53 0.00 3.18
2057 2320 4.680237 TTCCACGCGCTGACCAGG 62.680 66.667 5.73 0.00 0.00 4.45
2082 2345 4.457496 ATGCGCTGTGACGAGGGG 62.457 66.667 9.73 0.00 34.06 4.79
2196 2469 5.674148 GTCGTGATTGAACATTCATTGATCG 59.326 40.000 0.00 0.00 37.00 3.69
2291 2578 6.163159 TGAAACAAAATTTAATGATGGCGC 57.837 33.333 0.00 0.00 0.00 6.53
2305 2592 4.803426 GCGCCGTAGCTGCTGACT 62.803 66.667 13.43 0.00 36.19 3.41
2307 2594 2.510238 GCCGTAGCTGCTGACTGG 60.510 66.667 13.43 9.44 35.50 4.00
2308 2595 2.973899 CCGTAGCTGCTGACTGGT 59.026 61.111 13.43 0.00 0.00 4.00
2313 2600 1.819288 GTAGCTGCTGACTGGTGAGTA 59.181 52.381 13.43 0.00 30.16 2.59
2315 2602 0.739112 GCTGCTGACTGGTGAGTAGC 60.739 60.000 13.04 13.04 43.58 3.58
2319 2606 2.289072 TGCTGACTGGTGAGTAGCTTTC 60.289 50.000 0.00 0.00 33.47 2.62
2332 2619 3.910627 AGTAGCTTTCCTTCTTCTTCCCA 59.089 43.478 0.00 0.00 0.00 4.37
2346 2633 0.251653 TTCCCAGGCTGACTCGTACT 60.252 55.000 17.94 0.00 0.00 2.73
2371 2659 1.134965 ACTCAGCTGACATAGAACGGC 60.135 52.381 13.74 0.00 38.51 5.68
2374 2662 0.898320 AGCTGACATAGAACGGCACT 59.102 50.000 0.00 0.00 40.39 4.40
2396 2684 1.067354 GGTCGTGACCGGTGAAATACT 60.067 52.381 14.63 0.00 42.29 2.12
2397 2685 2.611224 GGTCGTGACCGGTGAAATACTT 60.611 50.000 14.63 0.00 42.29 2.24
2403 2691 5.620654 CGTGACCGGTGAAATACTTCTTCTA 60.621 44.000 14.63 0.00 32.33 2.10
2415 2703 0.608130 TTCTTCTAGCAGCGCCAGAA 59.392 50.000 2.29 7.47 0.00 3.02
2425 2713 1.000385 CAGCGCCAGAAATTTTCCACA 60.000 47.619 2.29 0.00 0.00 4.17
2431 2719 4.499696 CGCCAGAAATTTTCCACAAAGACT 60.500 41.667 5.52 0.00 0.00 3.24
2439 2727 2.550830 TCCACAAAGACTGAGGAAGC 57.449 50.000 0.00 0.00 41.35 3.86
2448 2736 0.674895 ACTGAGGAAGCCATGCGTTC 60.675 55.000 0.00 0.00 0.00 3.95
2451 2739 1.003839 AGGAAGCCATGCGTTCGAA 60.004 52.632 0.00 0.00 0.00 3.71
2457 2745 2.147958 AGCCATGCGTTCGAAAGTTTA 58.852 42.857 12.65 0.77 0.00 2.01
2461 2749 4.030195 GCCATGCGTTCGAAAGTTTATTTC 59.970 41.667 12.65 0.00 0.00 2.17
2462 2750 5.150683 CCATGCGTTCGAAAGTTTATTTCA 58.849 37.500 12.65 0.88 0.00 2.69
2463 2751 5.627367 CCATGCGTTCGAAAGTTTATTTCAA 59.373 36.000 12.65 0.00 0.00 2.69
2466 2754 7.144007 TGCGTTCGAAAGTTTATTTCAAAAG 57.856 32.000 12.65 0.00 0.00 2.27
2467 2755 6.967767 TGCGTTCGAAAGTTTATTTCAAAAGA 59.032 30.769 12.65 0.00 0.00 2.52
2468 2756 7.044576 TGCGTTCGAAAGTTTATTTCAAAAGAC 60.045 33.333 12.65 0.00 0.00 3.01
2469 2757 7.564538 GCGTTCGAAAGTTTATTTCAAAAGACC 60.565 37.037 12.65 0.00 0.00 3.85
2482 2770 5.048846 TCAAAAGACCCTAAGAGCAACTT 57.951 39.130 2.10 2.10 42.04 2.66
2486 2774 4.009370 AGACCCTAAGAGCAACTTCAAC 57.991 45.455 0.00 0.00 39.72 3.18
2487 2775 3.075148 GACCCTAAGAGCAACTTCAACC 58.925 50.000 0.00 0.00 39.72 3.77
2490 2778 1.464997 CTAAGAGCAACTTCAACCCGC 59.535 52.381 0.00 0.00 39.72 6.13
2494 2782 2.332654 GCAACTTCAACCCGCCGAT 61.333 57.895 0.00 0.00 0.00 4.18
2497 2785 2.890474 CTTCAACCCGCCGATCCG 60.890 66.667 0.00 0.00 0.00 4.18
2501 2789 3.697747 AACCCGCCGATCCGAACA 61.698 61.111 0.00 0.00 0.00 3.18
2502 2790 3.242897 AACCCGCCGATCCGAACAA 62.243 57.895 0.00 0.00 0.00 2.83
2507 2795 2.394136 CCGATCCGAACAAACGCG 59.606 61.111 3.53 3.53 0.00 6.01
2508 2796 2.275812 CGATCCGAACAAACGCGC 60.276 61.111 5.73 0.00 0.00 6.86
2514 2802 2.829834 GAACAAACGCGCGCTTTG 59.170 55.556 34.55 34.55 35.17 2.77
2517 2805 2.351774 CAAACGCGCGCTTTGTCA 60.352 55.556 31.30 0.00 0.00 3.58
2518 2806 2.052237 AAACGCGCGCTTTGTCAG 60.052 55.556 32.58 14.15 0.00 3.51
2519 2807 2.819552 AAACGCGCGCTTTGTCAGT 61.820 52.632 32.58 14.89 0.00 3.41
2527 2815 2.182014 GCGCTTTGTCAGTTTTTCGTT 58.818 42.857 0.00 0.00 0.00 3.85
2528 2816 2.213353 GCGCTTTGTCAGTTTTTCGTTC 59.787 45.455 0.00 0.00 0.00 3.95
2529 2817 2.458966 CGCTTTGTCAGTTTTTCGTTCG 59.541 45.455 0.00 0.00 0.00 3.95
2530 2818 2.213353 GCTTTGTCAGTTTTTCGTTCGC 59.787 45.455 0.00 0.00 0.00 4.70
2534 2822 2.673862 TGTCAGTTTTTCGTTCGCTTGA 59.326 40.909 0.00 0.00 0.00 3.02
2535 2823 3.125487 TGTCAGTTTTTCGTTCGCTTGAA 59.875 39.130 0.00 0.00 0.00 2.69
2540 2828 1.504359 TTTCGTTCGCTTGAATCGGT 58.496 45.000 0.00 0.00 33.37 4.69
2580 2868 1.989864 GCTTTTTAATTTGGGTCGGCG 59.010 47.619 0.00 0.00 0.00 6.46
2582 2870 1.906990 TTTTAATTTGGGTCGGCGGA 58.093 45.000 7.21 0.00 0.00 5.54
2602 2890 2.499205 CGCTCAACGGGAGGCATA 59.501 61.111 8.23 0.00 44.22 3.14
2605 2893 1.146263 CTCAACGGGAGGCATACCC 59.854 63.158 0.00 0.00 43.57 3.69
2613 2901 1.138859 GGGAGGCATACCCATTTTTGC 59.861 52.381 9.05 0.00 46.05 3.68
2617 2905 1.202405 GGCATACCCATTTTTGCCGAG 60.202 52.381 0.00 0.00 44.58 4.63
2630 2918 2.281208 CCGAGGTGGCCGAAACAA 60.281 61.111 0.00 0.00 0.00 2.83
2632 2920 1.241315 CCGAGGTGGCCGAAACAAAT 61.241 55.000 0.00 0.00 0.00 2.32
2641 2929 5.107259 GGTGGCCGAAACAAATTTAATCAAC 60.107 40.000 0.00 0.00 0.00 3.18
2667 2955 9.443323 CCATAATTATACATAAATGGTCGGTCA 57.557 33.333 0.00 0.00 30.97 4.02
2701 2989 7.806487 GCCAAAGTCCACTTAAACATAACTAAC 59.194 37.037 0.00 0.00 34.61 2.34
2702 2990 8.842280 CCAAAGTCCACTTAAACATAACTAACA 58.158 33.333 0.00 0.00 34.61 2.41
2730 3020 0.025770 CTGTAATAAACGCCCGCACG 59.974 55.000 0.00 0.00 39.50 5.34
2731 3021 0.389556 TGTAATAAACGCCCGCACGA 60.390 50.000 2.15 0.00 36.70 4.35
2744 3035 0.384309 CGCACGATGCCCTAGTAGAA 59.616 55.000 0.00 0.00 41.12 2.10
2745 3036 1.854227 GCACGATGCCCTAGTAGAAC 58.146 55.000 0.00 0.00 37.42 3.01
2746 3037 1.864435 GCACGATGCCCTAGTAGAACG 60.864 57.143 0.00 0.00 37.42 3.95
2751 3042 0.822164 TGCCCTAGTAGAACGCCTTC 59.178 55.000 0.00 0.00 0.00 3.46
2754 3045 0.751452 CCTAGTAGAACGCCTTCCCC 59.249 60.000 0.00 0.00 0.00 4.81
2763 3054 2.639327 CGCCTTCCCCTTGCCTTTG 61.639 63.158 0.00 0.00 0.00 2.77
2764 3055 2.947532 GCCTTCCCCTTGCCTTTGC 61.948 63.158 0.00 0.00 38.26 3.68
2766 3057 2.203773 TTCCCCTTGCCTTTGCCC 60.204 61.111 0.00 0.00 36.33 5.36
2768 3059 2.203832 CCCCTTGCCTTTGCCCTT 60.204 61.111 0.00 0.00 36.33 3.95
2770 3061 2.344872 CCTTGCCTTTGCCCTTGC 59.655 61.111 0.00 0.00 36.33 4.01
2776 3067 2.498056 CCTTTGCCCTTGCCGTTGT 61.498 57.895 0.00 0.00 36.33 3.32
2778 3069 0.875474 CTTTGCCCTTGCCGTTGTTG 60.875 55.000 0.00 0.00 36.33 3.33
2782 3073 4.999939 CCTTGCCGTTGTTGCCGC 63.000 66.667 0.00 0.00 0.00 6.53
2783 3074 4.999939 CTTGCCGTTGTTGCCGCC 63.000 66.667 0.00 0.00 0.00 6.13
2789 3080 4.264638 GTTGTTGCCGCCGCTTGT 62.265 61.111 0.00 0.00 35.36 3.16
2790 3081 3.959975 TTGTTGCCGCCGCTTGTC 61.960 61.111 0.00 0.00 35.36 3.18
2792 3083 4.389576 GTTGCCGCCGCTTGTCAG 62.390 66.667 0.00 0.00 35.36 3.51
2799 3090 2.358737 CCGCTTGTCAGGGGTGTC 60.359 66.667 0.00 0.00 46.20 3.67
2801 3092 2.426023 GCTTGTCAGGGGTGTCGT 59.574 61.111 0.00 0.00 0.00 4.34
2802 3093 1.961277 GCTTGTCAGGGGTGTCGTG 60.961 63.158 0.00 0.00 0.00 4.35
2803 3094 1.961277 CTTGTCAGGGGTGTCGTGC 60.961 63.158 0.00 0.00 0.00 5.34
2805 3096 3.986006 GTCAGGGGTGTCGTGCGA 61.986 66.667 0.00 0.00 0.00 5.10
2806 3097 3.986006 TCAGGGGTGTCGTGCGAC 61.986 66.667 16.69 16.69 44.77 5.19
2814 3105 4.102561 GTCGTGCGACATATGCCA 57.897 55.556 18.32 0.00 44.02 4.92
2815 3106 2.379054 GTCGTGCGACATATGCCAA 58.621 52.632 18.32 0.00 44.02 4.52
2817 3108 1.006086 TCGTGCGACATATGCCAAAG 58.994 50.000 1.58 0.00 0.00 2.77
2818 3109 0.027979 CGTGCGACATATGCCAAAGG 59.972 55.000 1.58 0.00 0.00 3.11
2819 3110 1.378531 GTGCGACATATGCCAAAGGA 58.621 50.000 1.58 0.00 0.00 3.36
2820 3111 1.949525 GTGCGACATATGCCAAAGGAT 59.050 47.619 1.58 0.00 0.00 3.24
2821 3112 1.948834 TGCGACATATGCCAAAGGATG 59.051 47.619 1.58 0.00 0.00 3.51
2823 3114 2.031682 GCGACATATGCCAAAGGATGAC 60.032 50.000 1.58 0.00 0.00 3.06
2824 3115 3.470709 CGACATATGCCAAAGGATGACT 58.529 45.455 1.58 0.00 0.00 3.41
2826 3117 5.056480 CGACATATGCCAAAGGATGACTTA 58.944 41.667 1.58 0.00 38.85 2.24
2827 3118 5.702670 CGACATATGCCAAAGGATGACTTAT 59.297 40.000 1.58 0.00 38.85 1.73
2829 3120 6.604171 ACATATGCCAAAGGATGACTTATCA 58.396 36.000 1.58 0.00 38.85 2.15
2832 3123 4.209538 TGCCAAAGGATGACTTATCATGG 58.790 43.478 0.00 0.00 46.01 3.66
2834 3125 4.037208 GCCAAAGGATGACTTATCATGGTG 59.963 45.833 0.00 0.00 46.01 4.17
2835 3126 5.439721 CCAAAGGATGACTTATCATGGTGA 58.560 41.667 0.00 0.00 46.01 4.02
2837 3128 4.970860 AGGATGACTTATCATGGTGAGG 57.029 45.455 2.46 0.00 46.01 3.86
2838 3129 4.560739 AGGATGACTTATCATGGTGAGGA 58.439 43.478 2.46 0.00 46.01 3.71
2840 3131 5.071519 AGGATGACTTATCATGGTGAGGAAG 59.928 44.000 2.46 0.00 46.01 3.46
2842 3133 5.604758 TGACTTATCATGGTGAGGAAGAG 57.395 43.478 2.46 0.00 31.45 2.85
2843 3134 5.026121 TGACTTATCATGGTGAGGAAGAGT 58.974 41.667 2.46 0.00 31.45 3.24
2844 3135 6.194967 TGACTTATCATGGTGAGGAAGAGTA 58.805 40.000 2.46 0.00 31.45 2.59
2845 3136 6.667848 TGACTTATCATGGTGAGGAAGAGTAA 59.332 38.462 2.46 0.00 31.45 2.24
2846 3137 7.118496 ACTTATCATGGTGAGGAAGAGTAAG 57.882 40.000 2.46 0.00 31.45 2.34
2848 3139 5.606348 ATCATGGTGAGGAAGAGTAAGAC 57.394 43.478 0.00 0.00 0.00 3.01
2849 3140 3.444034 TCATGGTGAGGAAGAGTAAGACG 59.556 47.826 0.00 0.00 0.00 4.18
2850 3141 2.872732 TGGTGAGGAAGAGTAAGACGT 58.127 47.619 0.00 0.00 0.00 4.34
2851 3142 2.818432 TGGTGAGGAAGAGTAAGACGTC 59.182 50.000 7.70 7.70 0.00 4.34
2852 3143 2.159544 GGTGAGGAAGAGTAAGACGTCG 60.160 54.545 10.46 0.00 0.00 5.12
2854 3145 0.810016 AGGAAGAGTAAGACGTCGCC 59.190 55.000 10.46 1.86 0.00 5.54
2855 3146 0.522915 GGAAGAGTAAGACGTCGCCG 60.523 60.000 10.46 0.00 40.83 6.46
2856 3147 0.522915 GAAGAGTAAGACGTCGCCGG 60.523 60.000 10.46 0.00 38.78 6.13
2857 3148 1.239968 AAGAGTAAGACGTCGCCGGT 61.240 55.000 10.46 0.00 38.78 5.28
2860 3151 4.424566 TAAGACGTCGCCGGTGCC 62.425 66.667 11.05 0.00 38.78 5.01
2866 3157 2.975799 GTCGCCGGTGCCTGAAAA 60.976 61.111 11.05 0.00 0.00 2.29
2867 3158 2.975799 TCGCCGGTGCCTGAAAAC 60.976 61.111 11.05 0.00 0.00 2.43
2868 3159 4.383602 CGCCGGTGCCTGAAAACG 62.384 66.667 0.00 0.00 0.00 3.60
2869 3160 4.038080 GCCGGTGCCTGAAAACGG 62.038 66.667 1.90 0.00 46.78 4.44
2871 3162 2.281208 CGGTGCCTGAAAACGGGA 60.281 61.111 0.00 0.00 0.00 5.14
2872 3163 1.674322 CGGTGCCTGAAAACGGGAT 60.674 57.895 0.00 0.00 0.00 3.85
2873 3164 0.391927 CGGTGCCTGAAAACGGGATA 60.392 55.000 0.00 0.00 0.00 2.59
2874 3165 1.828979 GGTGCCTGAAAACGGGATAA 58.171 50.000 0.00 0.00 0.00 1.75
2875 3166 1.743394 GGTGCCTGAAAACGGGATAAG 59.257 52.381 0.00 0.00 0.00 1.73
2876 3167 1.743394 GTGCCTGAAAACGGGATAAGG 59.257 52.381 0.00 0.00 0.00 2.69
2877 3168 0.738975 GCCTGAAAACGGGATAAGGC 59.261 55.000 5.17 5.17 43.05 4.35
2878 3169 1.014352 CCTGAAAACGGGATAAGGCG 58.986 55.000 0.00 0.00 0.00 5.52
2879 3170 1.677820 CCTGAAAACGGGATAAGGCGT 60.678 52.381 0.00 0.00 0.00 5.68
2880 3171 2.419021 CCTGAAAACGGGATAAGGCGTA 60.419 50.000 0.00 0.00 0.00 4.42
2881 3172 2.864343 CTGAAAACGGGATAAGGCGTAG 59.136 50.000 0.00 0.00 0.00 3.51
2882 3173 2.496871 TGAAAACGGGATAAGGCGTAGA 59.503 45.455 0.00 0.00 0.00 2.59
2883 3174 2.591571 AAACGGGATAAGGCGTAGAC 57.408 50.000 0.00 0.00 0.00 2.59
2884 3175 1.477553 AACGGGATAAGGCGTAGACA 58.522 50.000 0.00 0.00 39.87 3.41
2885 3176 1.700955 ACGGGATAAGGCGTAGACAT 58.299 50.000 0.00 0.00 39.87 3.06
2886 3177 1.340248 ACGGGATAAGGCGTAGACATG 59.660 52.381 0.00 0.00 39.87 3.21
2887 3178 1.340248 CGGGATAAGGCGTAGACATGT 59.660 52.381 0.00 0.00 39.87 3.21
2888 3179 2.555325 CGGGATAAGGCGTAGACATGTA 59.445 50.000 0.00 0.00 39.87 2.29
2898 3189 1.646624 TAGACATGTACGCCGACGCA 61.647 55.000 0.00 0.00 45.53 5.24
2899 3190 1.876714 GACATGTACGCCGACGCAT 60.877 57.895 0.00 0.00 45.53 4.73
2902 3193 1.141019 ATGTACGCCGACGCATCTT 59.859 52.632 0.00 0.00 45.53 2.40
2903 3194 0.382873 ATGTACGCCGACGCATCTTA 59.617 50.000 0.00 0.00 45.53 2.10
2904 3195 0.523968 TGTACGCCGACGCATCTTAC 60.524 55.000 0.00 0.00 45.53 2.34
2907 3198 2.185867 GCCGACGCATCTTACCCA 59.814 61.111 0.00 0.00 34.03 4.51
2908 3199 1.883084 GCCGACGCATCTTACCCAG 60.883 63.158 0.00 0.00 34.03 4.45
2909 3200 1.227263 CCGACGCATCTTACCCAGG 60.227 63.158 0.00 0.00 0.00 4.45
2911 3202 0.108329 CGACGCATCTTACCCAGGTT 60.108 55.000 0.00 0.00 0.00 3.50
2912 3203 1.653151 GACGCATCTTACCCAGGTTC 58.347 55.000 0.00 0.00 0.00 3.62
2913 3204 0.108329 ACGCATCTTACCCAGGTTCG 60.108 55.000 0.00 0.00 0.00 3.95
2921 3212 3.787001 CCCAGGTTCGGGGCTCTC 61.787 72.222 0.00 0.00 43.21 3.20
2922 3213 3.787001 CCAGGTTCGGGGCTCTCC 61.787 72.222 0.00 0.00 0.00 3.71
2923 3214 2.685380 CAGGTTCGGGGCTCTCCT 60.685 66.667 0.00 0.00 35.33 3.69
2924 3215 1.381327 CAGGTTCGGGGCTCTCCTA 60.381 63.158 0.00 0.00 35.33 2.94
2925 3216 1.075896 AGGTTCGGGGCTCTCCTAG 60.076 63.158 0.00 0.00 35.33 3.02
2926 3217 2.134933 GGTTCGGGGCTCTCCTAGG 61.135 68.421 0.82 0.82 35.33 3.02
2927 3218 1.076192 GTTCGGGGCTCTCCTAGGA 60.076 63.158 11.98 11.98 35.33 2.94
2928 3219 1.110518 GTTCGGGGCTCTCCTAGGAG 61.111 65.000 30.15 30.15 43.21 3.69
2947 3238 2.894765 GAGATAACACTCCTAGCCCTCC 59.105 54.545 0.00 0.00 0.00 4.30
2948 3239 2.520549 AGATAACACTCCTAGCCCTCCT 59.479 50.000 0.00 0.00 0.00 3.69
2949 3240 2.456073 TAACACTCCTAGCCCTCCTC 57.544 55.000 0.00 0.00 0.00 3.71
2950 3241 0.713579 AACACTCCTAGCCCTCCTCT 59.286 55.000 0.00 0.00 0.00 3.69
2951 3242 0.032615 ACACTCCTAGCCCTCCTCTG 60.033 60.000 0.00 0.00 0.00 3.35
2955 3246 3.230245 CTAGCCCTCCTCTGCGGG 61.230 72.222 0.00 0.00 43.60 6.13
2956 3247 4.075793 TAGCCCTCCTCTGCGGGT 62.076 66.667 0.00 0.00 42.67 5.28
2959 3250 3.151022 CCCTCCTCTGCGGGTCTC 61.151 72.222 0.00 0.00 35.65 3.36
2960 3251 3.151022 CCTCCTCTGCGGGTCTCC 61.151 72.222 0.00 0.00 0.00 3.71
2972 3263 1.040646 GGGTCTCCGCATGATCACTA 58.959 55.000 0.00 0.00 0.00 2.74
2973 3264 1.412710 GGGTCTCCGCATGATCACTAA 59.587 52.381 0.00 0.00 0.00 2.24
2974 3265 2.158957 GGGTCTCCGCATGATCACTAAA 60.159 50.000 0.00 0.00 0.00 1.85
2976 3267 3.743396 GGTCTCCGCATGATCACTAAATC 59.257 47.826 0.00 0.00 0.00 2.17
2978 3269 4.811024 GTCTCCGCATGATCACTAAATCAA 59.189 41.667 0.00 0.00 39.04 2.57
2980 3271 4.512484 TCCGCATGATCACTAAATCAACA 58.488 39.130 0.00 0.00 39.04 3.33
2982 3273 5.589855 TCCGCATGATCACTAAATCAACAAT 59.410 36.000 0.00 0.00 39.04 2.71
2983 3274 5.684184 CCGCATGATCACTAAATCAACAATG 59.316 40.000 0.00 0.00 39.04 2.82
2985 3276 6.567050 GCATGATCACTAAATCAACAATGGT 58.433 36.000 0.00 0.00 39.04 3.55
2987 3278 7.629008 GCATGATCACTAAATCAACAATGGTGA 60.629 37.037 2.44 2.44 39.04 4.02
2990 3281 8.100164 TGATCACTAAATCAACAATGGTGACTA 58.900 33.333 1.82 0.00 35.54 2.59
2992 3283 7.220740 TCACTAAATCAACAATGGTGACTACA 58.779 34.615 1.82 0.00 0.00 2.74
2996 3287 4.085357 TCAACAATGGTGACTACAAGCT 57.915 40.909 0.00 0.00 0.00 3.74
2997 3288 4.460263 TCAACAATGGTGACTACAAGCTT 58.540 39.130 0.00 0.00 0.00 3.74
2998 3289 4.275689 TCAACAATGGTGACTACAAGCTTG 59.724 41.667 24.84 24.84 0.00 4.01
3000 3291 2.816087 CAATGGTGACTACAAGCTTGCT 59.184 45.455 26.27 15.35 0.00 3.91
3001 3292 2.169832 TGGTGACTACAAGCTTGCTC 57.830 50.000 26.27 17.45 0.00 4.26
3002 3293 1.270839 TGGTGACTACAAGCTTGCTCC 60.271 52.381 26.27 18.44 0.00 4.70
3003 3294 1.002544 GGTGACTACAAGCTTGCTCCT 59.997 52.381 26.27 9.43 0.00 3.69
3006 3297 2.368548 TGACTACAAGCTTGCTCCTTGA 59.631 45.455 26.27 1.85 41.64 3.02
3007 3298 2.999355 GACTACAAGCTTGCTCCTTGAG 59.001 50.000 26.27 13.42 41.64 3.02
3008 3299 2.370189 ACTACAAGCTTGCTCCTTGAGT 59.630 45.455 26.27 13.99 41.64 3.41
3015 3589 2.620585 GCTTGCTCCTTGAGTTGTTTCT 59.379 45.455 0.00 0.00 31.39 2.52
3018 3592 4.955811 TGCTCCTTGAGTTGTTTCTCTA 57.044 40.909 0.00 0.00 35.68 2.43
3021 3595 5.167845 GCTCCTTGAGTTGTTTCTCTAGAG 58.832 45.833 13.98 13.98 38.75 2.43
3028 3602 5.478679 TGAGTTGTTTCTCTAGAGGAGGAAG 59.521 44.000 19.67 0.00 39.98 3.46
3029 3603 5.646215 AGTTGTTTCTCTAGAGGAGGAAGA 58.354 41.667 19.67 5.99 39.98 2.87
3031 3605 6.210584 AGTTGTTTCTCTAGAGGAGGAAGAAG 59.789 42.308 19.67 0.00 41.56 2.85
3032 3606 5.893500 TGTTTCTCTAGAGGAGGAAGAAGA 58.106 41.667 19.67 0.00 39.98 2.87
3033 3607 6.315714 TGTTTCTCTAGAGGAGGAAGAAGAA 58.684 40.000 19.67 0.00 39.98 2.52
3034 3608 6.209788 TGTTTCTCTAGAGGAGGAAGAAGAAC 59.790 42.308 19.67 3.53 39.98 3.01
3035 3609 5.522315 TCTCTAGAGGAGGAAGAAGAACA 57.478 43.478 19.67 0.00 42.10 3.18
3036 3610 5.893500 TCTCTAGAGGAGGAAGAAGAACAA 58.106 41.667 19.67 0.00 42.10 2.83
3037 3611 5.949354 TCTCTAGAGGAGGAAGAAGAACAAG 59.051 44.000 19.67 0.00 42.10 3.16
3038 3612 5.020132 TCTAGAGGAGGAAGAAGAACAAGG 58.980 45.833 0.00 0.00 0.00 3.61
3039 3613 2.304470 AGAGGAGGAAGAAGAACAAGGC 59.696 50.000 0.00 0.00 0.00 4.35
3040 3614 2.304470 GAGGAGGAAGAAGAACAAGGCT 59.696 50.000 0.00 0.00 0.00 4.58
3042 3616 3.517500 AGGAGGAAGAAGAACAAGGCTAG 59.482 47.826 0.00 0.00 0.00 3.42
3043 3617 3.266636 GAGGAAGAAGAACAAGGCTAGC 58.733 50.000 6.04 6.04 0.00 3.42
3044 3618 2.026729 AGGAAGAAGAACAAGGCTAGCC 60.027 50.000 27.19 27.19 0.00 3.93
3045 3619 2.360844 GAAGAAGAACAAGGCTAGCCC 58.639 52.381 30.42 14.46 36.58 5.19
3047 3621 2.834113 AGAAGAACAAGGCTAGCCCTA 58.166 47.619 30.42 0.00 45.62 3.53
3048 3622 2.769095 AGAAGAACAAGGCTAGCCCTAG 59.231 50.000 30.42 21.39 45.62 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.273919 ACGCGTACCTATTCGAATACC 57.726 47.619 11.67 2.29 0.00 2.73
1 2 5.023551 AGTACGCGTACCTATTCGAATAC 57.976 43.478 38.10 17.45 36.75 1.89
2 3 5.443261 CAAGTACGCGTACCTATTCGAATA 58.557 41.667 38.10 16.69 36.75 1.75
3 4 4.285292 CAAGTACGCGTACCTATTCGAAT 58.715 43.478 38.10 18.89 36.75 3.34
4 5 3.683989 CAAGTACGCGTACCTATTCGAA 58.316 45.455 38.10 6.35 36.75 3.71
5 6 2.539547 GCAAGTACGCGTACCTATTCGA 60.540 50.000 38.10 7.16 36.75 3.71
6 7 1.777461 GCAAGTACGCGTACCTATTCG 59.223 52.381 38.10 23.29 36.75 3.34
8 9 1.534595 CGGCAAGTACGCGTACCTATT 60.535 52.381 38.10 26.20 36.75 1.73
9 10 0.029834 CGGCAAGTACGCGTACCTAT 59.970 55.000 38.10 25.15 36.75 2.57
11 12 2.180017 CGGCAAGTACGCGTACCT 59.820 61.111 38.10 27.58 36.75 3.08
12 13 2.882301 CCGGCAAGTACGCGTACC 60.882 66.667 38.10 25.41 36.75 3.34
13 14 3.548231 GCCGGCAAGTACGCGTAC 61.548 66.667 35.97 35.97 36.35 3.67
14 15 3.975083 CTGCCGGCAAGTACGCGTA 62.975 63.158 32.09 16.41 0.00 4.42
17 18 3.788766 CACTGCCGGCAAGTACGC 61.789 66.667 32.09 0.00 0.00 4.42
18 19 3.118454 CCACTGCCGGCAAGTACG 61.118 66.667 32.09 20.81 0.00 3.67
43 44 1.937546 GCGCCAACAGCCAAATAGCT 61.938 55.000 0.00 0.00 46.45 3.32
44 45 1.517039 GCGCCAACAGCCAAATAGC 60.517 57.895 0.00 0.00 38.78 2.97
46 47 1.882311 CAGCGCCAACAGCCAAATA 59.118 52.632 2.29 0.00 38.78 1.40
47 48 2.652530 CAGCGCCAACAGCCAAAT 59.347 55.556 2.29 0.00 38.78 2.32
48 49 4.283403 GCAGCGCCAACAGCCAAA 62.283 61.111 2.29 0.00 38.78 3.28
59 60 1.440145 GGTAGAAGAATGGGCAGCGC 61.440 60.000 0.00 0.00 0.00 5.92
60 61 0.179000 AGGTAGAAGAATGGGCAGCG 59.821 55.000 0.00 0.00 0.00 5.18
61 62 2.019984 CAAGGTAGAAGAATGGGCAGC 58.980 52.381 0.00 0.00 0.00 5.25
64 65 2.128771 TGCAAGGTAGAAGAATGGGC 57.871 50.000 0.00 0.00 0.00 5.36
65 66 2.755103 GGTTGCAAGGTAGAAGAATGGG 59.245 50.000 0.00 0.00 0.00 4.00
67 68 3.690460 AGGGTTGCAAGGTAGAAGAATG 58.310 45.455 0.00 0.00 0.00 2.67
68 69 4.388577 AAGGGTTGCAAGGTAGAAGAAT 57.611 40.909 0.00 0.00 0.00 2.40
69 70 3.876309 AAGGGTTGCAAGGTAGAAGAA 57.124 42.857 0.00 0.00 0.00 2.52
70 71 3.394606 AGAAAGGGTTGCAAGGTAGAAGA 59.605 43.478 0.00 0.00 0.00 2.87
73 74 3.876309 AAGAAAGGGTTGCAAGGTAGA 57.124 42.857 0.00 0.00 0.00 2.59
75 76 3.383185 CACAAAGAAAGGGTTGCAAGGTA 59.617 43.478 0.00 0.00 0.00 3.08
76 77 2.168313 CACAAAGAAAGGGTTGCAAGGT 59.832 45.455 0.00 0.00 0.00 3.50
78 79 3.131046 AGACACAAAGAAAGGGTTGCAAG 59.869 43.478 0.00 0.00 0.00 4.01
80 81 2.687935 GAGACACAAAGAAAGGGTTGCA 59.312 45.455 0.00 0.00 0.00 4.08
81 82 2.687935 TGAGACACAAAGAAAGGGTTGC 59.312 45.455 0.00 0.00 0.00 4.17
83 84 4.855340 TCTTGAGACACAAAGAAAGGGTT 58.145 39.130 0.00 0.00 38.08 4.11
84 85 4.503714 TCTTGAGACACAAAGAAAGGGT 57.496 40.909 0.00 0.00 38.08 4.34
87 88 6.182039 TGTGTTCTTGAGACACAAAGAAAG 57.818 37.500 7.54 0.00 40.81 2.62
89 90 6.260050 GGTATGTGTTCTTGAGACACAAAGAA 59.740 38.462 13.24 0.00 45.71 2.52
90 91 5.758296 GGTATGTGTTCTTGAGACACAAAGA 59.242 40.000 13.24 1.20 45.71 2.52
91 92 5.527214 TGGTATGTGTTCTTGAGACACAAAG 59.473 40.000 13.24 0.00 45.71 2.77
92 93 5.432645 TGGTATGTGTTCTTGAGACACAAA 58.567 37.500 13.24 5.24 45.71 2.83
93 94 5.029807 TGGTATGTGTTCTTGAGACACAA 57.970 39.130 13.24 2.26 45.71 3.33
94 95 4.681074 TGGTATGTGTTCTTGAGACACA 57.319 40.909 11.85 11.85 46.47 3.72
96 97 4.565444 CCCATGGTATGTGTTCTTGAGACA 60.565 45.833 11.73 0.00 35.81 3.41
97 98 3.941483 CCCATGGTATGTGTTCTTGAGAC 59.059 47.826 11.73 0.00 0.00 3.36
98 99 3.587061 ACCCATGGTATGTGTTCTTGAGA 59.413 43.478 11.73 0.00 32.11 3.27
99 100 3.955471 ACCCATGGTATGTGTTCTTGAG 58.045 45.455 11.73 0.00 32.11 3.02
100 101 5.506730 TTACCCATGGTATGTGTTCTTGA 57.493 39.130 11.73 0.00 38.05 3.02
101 102 6.582677 TTTTACCCATGGTATGTGTTCTTG 57.417 37.500 11.73 0.00 38.05 3.02
102 103 7.790782 AATTTTACCCATGGTATGTGTTCTT 57.209 32.000 11.73 0.00 38.05 2.52
103 104 7.790782 AAATTTTACCCATGGTATGTGTTCT 57.209 32.000 11.73 0.00 38.05 3.01
104 105 7.333174 CCAAAATTTTACCCATGGTATGTGTTC 59.667 37.037 11.73 0.00 38.05 3.18
105 106 7.164803 CCAAAATTTTACCCATGGTATGTGTT 58.835 34.615 11.73 0.00 38.05 3.32
106 107 6.271159 ACCAAAATTTTACCCATGGTATGTGT 59.729 34.615 11.73 3.24 39.29 3.72
107 108 6.706295 ACCAAAATTTTACCCATGGTATGTG 58.294 36.000 11.73 0.00 39.29 3.21
108 109 6.498651 TGACCAAAATTTTACCCATGGTATGT 59.501 34.615 11.73 4.04 41.04 2.29
109 110 6.940739 TGACCAAAATTTTACCCATGGTATG 58.059 36.000 11.73 0.00 41.04 2.39
110 111 7.747809 ATGACCAAAATTTTACCCATGGTAT 57.252 32.000 11.73 0.39 41.04 2.73
111 112 8.700051 CATATGACCAAAATTTTACCCATGGTA 58.300 33.333 11.73 0.24 41.04 3.25
112 113 7.563906 CATATGACCAAAATTTTACCCATGGT 58.436 34.615 11.73 9.25 43.50 3.55
114 115 6.482973 GGCATATGACCAAAATTTTACCCATG 59.517 38.462 6.97 4.53 0.00 3.66
115 116 6.409120 GGGCATATGACCAAAATTTTACCCAT 60.409 38.462 23.61 9.13 44.76 4.00
116 117 5.104735 GGGCATATGACCAAAATTTTACCCA 60.105 40.000 23.61 2.33 44.76 4.51
140 141 4.349342 AGAAGACCTATTTGCCCCTCATAG 59.651 45.833 0.00 0.00 0.00 2.23
147 148 7.624549 TCATATATGAGAAGACCTATTTGCCC 58.375 38.462 11.49 0.00 32.11 5.36
156 157 8.926710 CGGTGTTAAATCATATATGAGAAGACC 58.073 37.037 25.78 25.78 40.64 3.85
157 158 9.477484 ACGGTGTTAAATCATATATGAGAAGAC 57.523 33.333 19.73 18.60 40.64 3.01
169 170 9.804758 TTTCAAACTTTAACGGTGTTAAATCAT 57.195 25.926 13.45 2.92 0.00 2.45
170 171 9.804758 ATTTCAAACTTTAACGGTGTTAAATCA 57.195 25.926 13.45 0.00 0.00 2.57
172 173 9.036671 CCATTTCAAACTTTAACGGTGTTAAAT 57.963 29.630 13.45 0.35 0.00 1.40
173 174 8.248945 TCCATTTCAAACTTTAACGGTGTTAAA 58.751 29.630 12.69 12.69 0.00 1.52
174 175 7.701501 GTCCATTTCAAACTTTAACGGTGTTAA 59.298 33.333 0.00 0.00 0.00 2.01
175 176 7.194962 GTCCATTTCAAACTTTAACGGTGTTA 58.805 34.615 0.00 0.00 0.00 2.41
176 177 6.037726 GTCCATTTCAAACTTTAACGGTGTT 58.962 36.000 0.00 0.00 0.00 3.32
177 178 5.584442 GTCCATTTCAAACTTTAACGGTGT 58.416 37.500 0.00 0.00 0.00 4.16
178 179 4.673311 CGTCCATTTCAAACTTTAACGGTG 59.327 41.667 0.00 0.00 0.00 4.94
179 180 4.575645 TCGTCCATTTCAAACTTTAACGGT 59.424 37.500 0.00 0.00 0.00 4.83
180 181 5.098218 TCGTCCATTTCAAACTTTAACGG 57.902 39.130 0.00 0.00 0.00 4.44
181 182 6.689669 ACTTTCGTCCATTTCAAACTTTAACG 59.310 34.615 0.00 0.00 0.00 3.18
182 183 7.486870 ACACTTTCGTCCATTTCAAACTTTAAC 59.513 33.333 0.00 0.00 0.00 2.01
183 184 7.540299 ACACTTTCGTCCATTTCAAACTTTAA 58.460 30.769 0.00 0.00 0.00 1.52
184 185 7.090953 ACACTTTCGTCCATTTCAAACTTTA 57.909 32.000 0.00 0.00 0.00 1.85
185 186 5.961272 ACACTTTCGTCCATTTCAAACTTT 58.039 33.333 0.00 0.00 0.00 2.66
186 187 5.124776 TGACACTTTCGTCCATTTCAAACTT 59.875 36.000 0.00 0.00 34.88 2.66
187 188 4.638421 TGACACTTTCGTCCATTTCAAACT 59.362 37.500 0.00 0.00 34.88 2.66
188 189 4.915704 TGACACTTTCGTCCATTTCAAAC 58.084 39.130 0.00 0.00 34.88 2.93
189 190 5.766150 ATGACACTTTCGTCCATTTCAAA 57.234 34.783 0.00 0.00 34.88 2.69
190 191 6.869315 TTATGACACTTTCGTCCATTTCAA 57.131 33.333 0.00 0.00 34.88 2.69
191 192 6.708502 TCTTTATGACACTTTCGTCCATTTCA 59.291 34.615 0.00 0.00 34.88 2.69
192 193 7.129109 TCTTTATGACACTTTCGTCCATTTC 57.871 36.000 0.00 0.00 34.88 2.17
193 194 7.012894 TGTTCTTTATGACACTTTCGTCCATTT 59.987 33.333 0.00 0.00 34.88 2.32
194 195 6.485313 TGTTCTTTATGACACTTTCGTCCATT 59.515 34.615 0.00 0.00 34.88 3.16
195 196 5.995282 TGTTCTTTATGACACTTTCGTCCAT 59.005 36.000 0.00 0.00 34.88 3.41
196 197 5.361427 TGTTCTTTATGACACTTTCGTCCA 58.639 37.500 0.00 0.00 34.88 4.02
197 198 5.917541 TGTTCTTTATGACACTTTCGTCC 57.082 39.130 0.00 0.00 34.88 4.79
198 199 9.872757 TTTTATGTTCTTTATGACACTTTCGTC 57.127 29.630 0.00 0.00 36.40 4.20
221 222 8.531146 CCCAATCTAACACCATGTCTAAATTTT 58.469 33.333 0.00 0.00 0.00 1.82
222 223 7.893302 TCCCAATCTAACACCATGTCTAAATTT 59.107 33.333 0.00 0.00 0.00 1.82
223 224 7.410174 TCCCAATCTAACACCATGTCTAAATT 58.590 34.615 0.00 0.00 0.00 1.82
224 225 6.969043 TCCCAATCTAACACCATGTCTAAAT 58.031 36.000 0.00 0.00 0.00 1.40
225 226 6.381498 TCCCAATCTAACACCATGTCTAAA 57.619 37.500 0.00 0.00 0.00 1.85
226 227 6.214615 TCTTCCCAATCTAACACCATGTCTAA 59.785 38.462 0.00 0.00 0.00 2.10
227 228 5.724370 TCTTCCCAATCTAACACCATGTCTA 59.276 40.000 0.00 0.00 0.00 2.59
228 229 4.536090 TCTTCCCAATCTAACACCATGTCT 59.464 41.667 0.00 0.00 0.00 3.41
229 230 4.843728 TCTTCCCAATCTAACACCATGTC 58.156 43.478 0.00 0.00 0.00 3.06
230 231 4.927267 TCTTCCCAATCTAACACCATGT 57.073 40.909 0.00 0.00 0.00 3.21
231 232 6.588719 TTTTCTTCCCAATCTAACACCATG 57.411 37.500 0.00 0.00 0.00 3.66
232 233 6.553100 TGTTTTTCTTCCCAATCTAACACCAT 59.447 34.615 0.00 0.00 0.00 3.55
233 234 5.894393 TGTTTTTCTTCCCAATCTAACACCA 59.106 36.000 0.00 0.00 0.00 4.17
234 235 6.399639 TGTTTTTCTTCCCAATCTAACACC 57.600 37.500 0.00 0.00 0.00 4.16
235 236 8.887036 AATTGTTTTTCTTCCCAATCTAACAC 57.113 30.769 0.00 0.00 0.00 3.32
236 237 8.923270 AGAATTGTTTTTCTTCCCAATCTAACA 58.077 29.630 0.00 0.00 31.94 2.41
239 240 9.807921 ACTAGAATTGTTTTTCTTCCCAATCTA 57.192 29.630 0.00 0.00 37.20 1.98
240 241 8.579863 CACTAGAATTGTTTTTCTTCCCAATCT 58.420 33.333 0.00 0.00 37.20 2.40
241 242 8.360390 ACACTAGAATTGTTTTTCTTCCCAATC 58.640 33.333 0.00 0.00 37.20 2.67
242 243 8.250143 ACACTAGAATTGTTTTTCTTCCCAAT 57.750 30.769 0.00 0.00 37.20 3.16
243 244 7.340743 TGACACTAGAATTGTTTTTCTTCCCAA 59.659 33.333 0.00 0.00 37.20 4.12
244 245 6.831353 TGACACTAGAATTGTTTTTCTTCCCA 59.169 34.615 0.00 0.00 37.20 4.37
245 246 7.272037 TGACACTAGAATTGTTTTTCTTCCC 57.728 36.000 0.00 0.00 37.20 3.97
246 247 9.750125 ATTTGACACTAGAATTGTTTTTCTTCC 57.250 29.630 0.00 0.00 37.20 3.46
254 255 9.846248 GCTTTCATATTTGACACTAGAATTGTT 57.154 29.630 0.00 0.00 0.00 2.83
255 256 9.013229 TGCTTTCATATTTGACACTAGAATTGT 57.987 29.630 0.00 0.00 0.00 2.71
256 257 9.844790 TTGCTTTCATATTTGACACTAGAATTG 57.155 29.630 0.00 0.00 0.00 2.32
274 275 9.979578 ATGACACTGTTTTAAATATTGCTTTCA 57.020 25.926 0.00 0.00 0.00 2.69
329 330 6.830912 ACTATTAAGCAGCAGGACATCATAA 58.169 36.000 0.00 0.00 0.00 1.90
340 341 4.588899 ACATGGACAACTATTAAGCAGCA 58.411 39.130 0.00 0.00 0.00 4.41
397 398 1.886313 CGGCTCGATGCAGATTGCT 60.886 57.895 8.71 0.00 45.31 3.91
420 421 0.885196 TGTTGGTAAAGCCGATTGCC 59.115 50.000 0.00 0.00 42.71 4.52
442 443 3.615351 GCTAAGCCGATTAGGATCCAGTC 60.615 52.174 15.82 7.70 45.00 3.51
476 477 1.469079 CGGCGAAACCAATTGGATTCC 60.469 52.381 30.82 24.54 42.07 3.01
481 482 1.281566 GCAACGGCGAAACCAATTGG 61.282 55.000 23.31 23.31 39.03 3.16
516 518 2.231618 GCGTCGGCTTAGCTGTAGC 61.232 63.158 13.16 14.88 36.18 3.58
750 957 1.737363 GCTGCTGTTTCCGACCTCTAG 60.737 57.143 0.00 0.00 0.00 2.43
751 958 0.246635 GCTGCTGTTTCCGACCTCTA 59.753 55.000 0.00 0.00 0.00 2.43
817 1024 0.106217 GGTGAGAGAGAGAGAGGGGG 60.106 65.000 0.00 0.00 0.00 5.40
818 1025 0.106217 GGGTGAGAGAGAGAGAGGGG 60.106 65.000 0.00 0.00 0.00 4.79
819 1026 0.465460 CGGGTGAGAGAGAGAGAGGG 60.465 65.000 0.00 0.00 0.00 4.30
820 1027 1.101049 GCGGGTGAGAGAGAGAGAGG 61.101 65.000 0.00 0.00 0.00 3.69
821 1028 0.393673 TGCGGGTGAGAGAGAGAGAG 60.394 60.000 0.00 0.00 0.00 3.20
822 1029 0.678366 GTGCGGGTGAGAGAGAGAGA 60.678 60.000 0.00 0.00 0.00 3.10
823 1030 1.662438 GGTGCGGGTGAGAGAGAGAG 61.662 65.000 0.00 0.00 0.00 3.20
824 1031 1.679305 GGTGCGGGTGAGAGAGAGA 60.679 63.158 0.00 0.00 0.00 3.10
825 1032 1.662438 GAGGTGCGGGTGAGAGAGAG 61.662 65.000 0.00 0.00 0.00 3.20
826 1033 1.679305 GAGGTGCGGGTGAGAGAGA 60.679 63.158 0.00 0.00 0.00 3.10
891 1120 4.603946 GTATGCCTCCGACCCCGC 62.604 72.222 0.00 0.00 0.00 6.13
952 1186 2.624838 CACAGAGGAACCAATGCTTTGT 59.375 45.455 11.03 0.00 44.15 2.83
954 1188 1.615392 GCACAGAGGAACCAATGCTTT 59.385 47.619 0.00 0.00 0.00 3.51
955 1189 1.202976 AGCACAGAGGAACCAATGCTT 60.203 47.619 0.00 0.00 40.39 3.91
963 1202 2.029844 GTGGCGAGCACAGAGGAAC 61.030 63.158 0.00 0.00 0.00 3.62
1489 1740 2.433994 GCAGGAGCTCCAGGGAGAG 61.434 68.421 33.90 14.79 44.53 3.20
2057 2320 1.722751 CGTCACAGCGCATGTTTTCTC 60.723 52.381 11.47 0.00 41.41 2.87
2235 2512 2.052782 TATCGCCAGACTGTAGCAGA 57.947 50.000 0.93 2.01 35.18 4.26
2277 2564 1.535462 GCTACGGCGCCATCATTAAAT 59.465 47.619 28.98 1.83 0.00 1.40
2291 2578 1.446792 CACCAGTCAGCAGCTACGG 60.447 63.158 0.00 0.00 0.00 4.02
2305 2592 3.904339 AGAAGAAGGAAAGCTACTCACCA 59.096 43.478 0.00 0.00 0.00 4.17
2307 2594 4.932799 GGAAGAAGAAGGAAAGCTACTCAC 59.067 45.833 0.00 0.00 0.00 3.51
2308 2595 4.020128 GGGAAGAAGAAGGAAAGCTACTCA 60.020 45.833 0.00 0.00 0.00 3.41
2313 2600 2.040947 CCTGGGAAGAAGAAGGAAAGCT 59.959 50.000 0.00 0.00 30.92 3.74
2315 2602 2.040947 AGCCTGGGAAGAAGAAGGAAAG 59.959 50.000 0.00 0.00 30.92 2.62
2319 2606 0.987294 TCAGCCTGGGAAGAAGAAGG 59.013 55.000 0.00 0.00 0.00 3.46
2332 2619 1.811359 GTGTACAGTACGAGTCAGCCT 59.189 52.381 6.23 0.00 0.00 4.58
2346 2633 4.379499 CGTTCTATGTCAGCTGAGTGTACA 60.379 45.833 18.89 12.38 0.00 2.90
2396 2684 2.276869 TCTGGCGCTGCTAGAAGAA 58.723 52.632 7.64 0.00 42.85 2.52
2397 2685 4.018409 TCTGGCGCTGCTAGAAGA 57.982 55.556 7.64 0.00 42.85 2.87
2403 2691 0.244721 GGAAAATTTCTGGCGCTGCT 59.755 50.000 7.64 0.00 0.00 4.24
2425 2713 1.831580 GCATGGCTTCCTCAGTCTTT 58.168 50.000 0.00 0.00 0.00 2.52
2431 2719 1.741401 CGAACGCATGGCTTCCTCA 60.741 57.895 0.00 0.00 0.00 3.86
2439 2727 5.150683 TGAAATAAACTTTCGAACGCATGG 58.849 37.500 0.00 0.00 0.00 3.66
2448 2736 9.394477 CTTAGGGTCTTTTGAAATAAACTTTCG 57.606 33.333 0.00 0.00 0.00 3.46
2451 2739 8.577296 GCTCTTAGGGTCTTTTGAAATAAACTT 58.423 33.333 0.00 0.00 0.00 2.66
2457 2745 6.071320 AGTTGCTCTTAGGGTCTTTTGAAAT 58.929 36.000 0.00 0.00 0.00 2.17
2461 2749 4.821805 TGAAGTTGCTCTTAGGGTCTTTTG 59.178 41.667 0.00 0.00 36.40 2.44
2462 2750 5.048846 TGAAGTTGCTCTTAGGGTCTTTT 57.951 39.130 0.00 0.00 36.40 2.27
2463 2751 4.706842 TGAAGTTGCTCTTAGGGTCTTT 57.293 40.909 0.00 0.00 36.40 2.52
2466 2754 3.075148 GGTTGAAGTTGCTCTTAGGGTC 58.925 50.000 0.00 0.00 36.40 4.46
2467 2755 2.224793 GGGTTGAAGTTGCTCTTAGGGT 60.225 50.000 0.00 0.00 36.40 4.34
2468 2756 2.437413 GGGTTGAAGTTGCTCTTAGGG 58.563 52.381 0.00 0.00 36.40 3.53
2469 2757 2.076863 CGGGTTGAAGTTGCTCTTAGG 58.923 52.381 0.00 0.00 36.40 2.69
2482 2770 3.383681 TTCGGATCGGCGGGTTGA 61.384 61.111 7.21 0.00 0.00 3.18
2486 2774 2.435234 TTTGTTCGGATCGGCGGG 60.435 61.111 7.21 0.00 0.00 6.13
2487 2775 2.782615 GTTTGTTCGGATCGGCGG 59.217 61.111 7.21 0.00 0.00 6.13
2490 2778 2.394136 CGCGTTTGTTCGGATCGG 59.606 61.111 0.00 0.00 0.00 4.18
2497 2785 1.851984 GACAAAGCGCGCGTTTGTTC 61.852 55.000 38.07 30.79 45.87 3.18
2501 2789 2.052237 CTGACAAAGCGCGCGTTT 60.052 55.556 29.21 29.38 0.00 3.60
2502 2790 2.317685 AAACTGACAAAGCGCGCGTT 62.318 50.000 32.35 26.36 0.00 4.84
2507 2795 1.822581 ACGAAAAACTGACAAAGCGC 58.177 45.000 0.00 0.00 0.00 5.92
2508 2796 2.458966 CGAACGAAAAACTGACAAAGCG 59.541 45.455 0.00 0.00 0.00 4.68
2514 2802 3.313274 TCAAGCGAACGAAAAACTGAC 57.687 42.857 0.00 0.00 0.00 3.51
2517 2805 3.541711 CGATTCAAGCGAACGAAAAACT 58.458 40.909 0.00 0.00 32.81 2.66
2518 2806 2.650297 CCGATTCAAGCGAACGAAAAAC 59.350 45.455 0.00 0.00 32.81 2.43
2519 2807 2.288458 ACCGATTCAAGCGAACGAAAAA 59.712 40.909 0.00 0.00 32.81 1.94
2527 2815 1.447838 GCCTGACCGATTCAAGCGA 60.448 57.895 0.00 0.00 31.95 4.93
2528 2816 3.093278 GCCTGACCGATTCAAGCG 58.907 61.111 0.00 0.00 31.95 4.68
2529 2817 2.464459 CCGCCTGACCGATTCAAGC 61.464 63.158 0.00 0.00 38.20 4.01
2530 2818 1.084370 GTCCGCCTGACCGATTCAAG 61.084 60.000 0.00 0.00 38.09 3.02
2534 2822 3.379445 ACGTCCGCCTGACCGATT 61.379 61.111 0.00 0.00 41.18 3.34
2535 2823 4.129737 CACGTCCGCCTGACCGAT 62.130 66.667 0.00 0.00 41.18 4.18
2554 2842 3.595173 ACCCAAATTAAAAAGCGGATGC 58.405 40.909 0.00 0.00 43.24 3.91
2556 2844 3.119280 CCGACCCAAATTAAAAAGCGGAT 60.119 43.478 0.00 0.00 38.57 4.18
2564 2852 1.746220 CATCCGCCGACCCAAATTAAA 59.254 47.619 0.00 0.00 0.00 1.52
2567 2855 2.414785 GCATCCGCCGACCCAAATT 61.415 57.895 0.00 0.00 0.00 1.82
2580 2868 2.892425 CTCCCGTTGAGCGCATCC 60.892 66.667 11.47 0.00 39.71 3.51
2588 2876 3.316029 GGGTATGCCTCCCGTTGA 58.684 61.111 0.00 0.00 35.27 3.18
2602 2890 1.184970 CCACCTCGGCAAAAATGGGT 61.185 55.000 0.00 0.00 0.00 4.51
2613 2901 1.241315 ATTTGTTTCGGCCACCTCGG 61.241 55.000 2.24 0.00 38.11 4.63
2617 2905 4.561105 TGATTAAATTTGTTTCGGCCACC 58.439 39.130 2.24 0.00 0.00 4.61
2641 2929 9.443323 TGACCGACCATTTATGTATAATTATGG 57.557 33.333 8.28 11.27 36.98 2.74
2667 2955 3.292159 GGACTTTGGCCGGCGTTT 61.292 61.111 22.54 1.74 0.00 3.60
2713 3003 0.932399 ATCGTGCGGGCGTTTATTAC 59.068 50.000 0.00 0.00 0.00 1.89
2715 3005 1.719117 CATCGTGCGGGCGTTTATT 59.281 52.632 0.00 0.00 0.00 1.40
2730 3020 1.041437 AGGCGTTCTACTAGGGCATC 58.959 55.000 0.00 0.00 0.00 3.91
2731 3021 1.413077 GAAGGCGTTCTACTAGGGCAT 59.587 52.381 11.82 0.00 0.00 4.40
2744 3035 3.146828 AAAGGCAAGGGGAAGGCGT 62.147 57.895 0.00 0.00 35.18 5.68
2745 3036 2.283173 AAAGGCAAGGGGAAGGCG 60.283 61.111 0.00 0.00 35.18 5.52
2746 3037 2.947532 GCAAAGGCAAGGGGAAGGC 61.948 63.158 0.00 0.00 40.72 4.35
2751 3042 2.203832 AAGGGCAAAGGCAAGGGG 60.204 61.111 0.00 0.00 43.71 4.79
2754 3045 2.344872 GGCAAGGGCAAAGGCAAG 59.655 61.111 0.00 0.00 43.71 4.01
2763 3054 4.662961 GGCAACAACGGCAAGGGC 62.663 66.667 0.00 0.00 40.13 5.19
2764 3055 4.341502 CGGCAACAACGGCAAGGG 62.342 66.667 0.00 0.00 0.00 3.95
2782 3073 2.358737 GACACCCCTGACAAGCGG 60.359 66.667 0.00 0.00 0.00 5.52
2783 3074 2.738521 CGACACCCCTGACAAGCG 60.739 66.667 0.00 0.00 0.00 4.68
2785 3076 1.961277 GCACGACACCCCTGACAAG 60.961 63.158 0.00 0.00 0.00 3.16
2786 3077 2.110213 GCACGACACCCCTGACAA 59.890 61.111 0.00 0.00 0.00 3.18
2787 3078 4.293648 CGCACGACACCCCTGACA 62.294 66.667 0.00 0.00 0.00 3.58
2788 3079 3.986006 TCGCACGACACCCCTGAC 61.986 66.667 0.00 0.00 0.00 3.51
2789 3080 3.986006 GTCGCACGACACCCCTGA 61.986 66.667 17.70 0.00 44.02 3.86
2797 3088 0.724549 TTTGGCATATGTCGCACGAC 59.275 50.000 15.94 15.94 44.77 4.34
2799 3090 0.027979 CCTTTGGCATATGTCGCACG 59.972 55.000 2.28 0.00 0.00 5.34
2801 3092 1.948834 CATCCTTTGGCATATGTCGCA 59.051 47.619 2.28 0.00 0.00 5.10
2802 3093 2.031682 GTCATCCTTTGGCATATGTCGC 60.032 50.000 2.28 0.00 0.00 5.19
2803 3094 3.470709 AGTCATCCTTTGGCATATGTCG 58.529 45.455 2.28 0.00 29.99 4.35
2805 3096 6.604171 TGATAAGTCATCCTTTGGCATATGT 58.396 36.000 4.29 0.00 34.46 2.29
2806 3097 7.362660 CCATGATAAGTCATCCTTTGGCATATG 60.363 40.741 0.00 0.00 43.14 1.78
2807 3098 6.662234 CCATGATAAGTCATCCTTTGGCATAT 59.338 38.462 0.00 0.00 43.14 1.78
2808 3099 6.005823 CCATGATAAGTCATCCTTTGGCATA 58.994 40.000 0.00 0.00 43.14 3.14
2809 3100 4.831155 CCATGATAAGTCATCCTTTGGCAT 59.169 41.667 0.00 0.00 43.14 4.40
2810 3101 4.209538 CCATGATAAGTCATCCTTTGGCA 58.790 43.478 0.00 0.00 43.14 4.92
2811 3102 4.037208 CACCATGATAAGTCATCCTTTGGC 59.963 45.833 0.00 0.00 43.14 4.52
2812 3103 5.439721 TCACCATGATAAGTCATCCTTTGG 58.560 41.667 0.00 0.00 43.14 3.28
2814 3105 5.429762 TCCTCACCATGATAAGTCATCCTTT 59.570 40.000 0.00 0.00 43.14 3.11
2815 3106 4.971282 TCCTCACCATGATAAGTCATCCTT 59.029 41.667 0.00 0.00 43.14 3.36
2817 3108 4.963318 TCCTCACCATGATAAGTCATCC 57.037 45.455 0.00 0.00 43.14 3.51
2818 3109 6.166984 TCTTCCTCACCATGATAAGTCATC 57.833 41.667 0.00 0.00 43.14 2.92
2819 3110 5.664908 ACTCTTCCTCACCATGATAAGTCAT 59.335 40.000 0.00 0.00 45.87 3.06
2820 3111 5.026121 ACTCTTCCTCACCATGATAAGTCA 58.974 41.667 0.00 0.00 39.04 3.41
2821 3112 5.606348 ACTCTTCCTCACCATGATAAGTC 57.394 43.478 0.00 0.00 0.00 3.01
2823 3114 7.206687 GTCTTACTCTTCCTCACCATGATAAG 58.793 42.308 0.00 0.00 0.00 1.73
2824 3115 6.183360 CGTCTTACTCTTCCTCACCATGATAA 60.183 42.308 0.00 0.00 0.00 1.75
2826 3117 4.098654 CGTCTTACTCTTCCTCACCATGAT 59.901 45.833 0.00 0.00 0.00 2.45
2827 3118 3.444034 CGTCTTACTCTTCCTCACCATGA 59.556 47.826 0.00 0.00 0.00 3.07
2829 3120 3.432378 ACGTCTTACTCTTCCTCACCAT 58.568 45.455 0.00 0.00 0.00 3.55
2832 3123 2.728535 GCGACGTCTTACTCTTCCTCAC 60.729 54.545 14.70 0.00 0.00 3.51
2834 3125 1.202166 GGCGACGTCTTACTCTTCCTC 60.202 57.143 14.70 0.00 0.00 3.71
2835 3126 0.810016 GGCGACGTCTTACTCTTCCT 59.190 55.000 14.70 0.00 0.00 3.36
2849 3140 2.975799 TTTTCAGGCACCGGCGAC 60.976 61.111 9.30 0.00 42.47 5.19
2850 3141 2.975799 GTTTTCAGGCACCGGCGA 60.976 61.111 9.30 0.00 42.47 5.54
2851 3142 4.383602 CGTTTTCAGGCACCGGCG 62.384 66.667 0.00 0.00 42.47 6.46
2852 3143 4.038080 CCGTTTTCAGGCACCGGC 62.038 66.667 0.00 0.00 40.13 6.13
2854 3145 0.391927 TATCCCGTTTTCAGGCACCG 60.392 55.000 0.00 0.00 0.00 4.94
2855 3146 1.743394 CTTATCCCGTTTTCAGGCACC 59.257 52.381 0.00 0.00 0.00 5.01
2856 3147 1.743394 CCTTATCCCGTTTTCAGGCAC 59.257 52.381 0.00 0.00 0.00 5.01
2857 3148 1.953311 GCCTTATCCCGTTTTCAGGCA 60.953 52.381 3.07 0.00 45.29 4.75
2860 3151 1.734163 ACGCCTTATCCCGTTTTCAG 58.266 50.000 0.00 0.00 33.26 3.02
2861 3152 2.496871 TCTACGCCTTATCCCGTTTTCA 59.503 45.455 0.00 0.00 38.75 2.69
2862 3153 2.862536 GTCTACGCCTTATCCCGTTTTC 59.137 50.000 0.00 0.00 38.75 2.29
2863 3154 2.234414 TGTCTACGCCTTATCCCGTTTT 59.766 45.455 0.00 0.00 38.75 2.43
2864 3155 1.826720 TGTCTACGCCTTATCCCGTTT 59.173 47.619 0.00 0.00 38.75 3.60
2865 3156 1.477553 TGTCTACGCCTTATCCCGTT 58.522 50.000 0.00 0.00 38.75 4.44
2866 3157 1.340248 CATGTCTACGCCTTATCCCGT 59.660 52.381 0.00 0.00 41.11 5.28
2867 3158 1.340248 ACATGTCTACGCCTTATCCCG 59.660 52.381 0.00 0.00 0.00 5.14
2868 3159 3.611057 CGTACATGTCTACGCCTTATCCC 60.611 52.174 0.00 0.00 33.61 3.85
2869 3160 3.562505 CGTACATGTCTACGCCTTATCC 58.437 50.000 0.00 0.00 33.61 2.59
2877 3168 0.922560 CGTCGGCGTACATGTCTACG 60.923 60.000 15.25 15.25 42.04 3.51
2878 3169 1.198608 GCGTCGGCGTACATGTCTAC 61.199 60.000 12.58 0.00 40.81 2.59
2879 3170 1.063006 GCGTCGGCGTACATGTCTA 59.937 57.895 12.58 0.00 40.81 2.59
2880 3171 2.202570 GCGTCGGCGTACATGTCT 60.203 61.111 12.58 0.00 40.81 3.41
2881 3172 1.808234 GATGCGTCGGCGTACATGTC 61.808 60.000 12.58 0.00 44.10 3.06
2882 3173 1.876714 GATGCGTCGGCGTACATGT 60.877 57.895 12.58 2.69 44.10 3.21
2883 3174 1.145759 AAGATGCGTCGGCGTACATG 61.146 55.000 12.58 0.00 44.10 3.21
2884 3175 0.382873 TAAGATGCGTCGGCGTACAT 59.617 50.000 12.58 6.78 44.10 2.29
2885 3176 0.523968 GTAAGATGCGTCGGCGTACA 60.524 55.000 12.58 0.61 44.10 2.90
2886 3177 1.204856 GGTAAGATGCGTCGGCGTAC 61.205 60.000 12.58 4.80 44.10 3.67
2887 3178 1.064621 GGTAAGATGCGTCGGCGTA 59.935 57.895 12.58 7.11 44.10 4.42
2888 3179 2.202703 GGTAAGATGCGTCGGCGT 60.203 61.111 12.58 0.00 44.10 5.68
2891 3182 1.227263 CCTGGGTAAGATGCGTCGG 60.227 63.158 0.00 0.00 0.00 4.79
2892 3183 0.108329 AACCTGGGTAAGATGCGTCG 60.108 55.000 0.00 0.00 0.00 5.12
2893 3184 1.653151 GAACCTGGGTAAGATGCGTC 58.347 55.000 0.00 0.00 0.00 5.19
2894 3185 0.108329 CGAACCTGGGTAAGATGCGT 60.108 55.000 0.00 0.00 0.00 5.24
2907 3198 1.075896 CTAGGAGAGCCCCGAACCT 60.076 63.158 0.00 0.00 34.66 3.50
2908 3199 2.134933 CCTAGGAGAGCCCCGAACC 61.135 68.421 1.05 0.00 34.66 3.62
2909 3200 1.076192 TCCTAGGAGAGCCCCGAAC 60.076 63.158 7.62 0.00 34.66 3.95
2911 3202 1.696674 TCTCCTAGGAGAGCCCCGA 60.697 63.158 33.59 13.46 45.26 5.14
2912 3203 2.927864 TCTCCTAGGAGAGCCCCG 59.072 66.667 33.59 11.25 45.26 5.73
2926 3217 2.894765 GGAGGGCTAGGAGTGTTATCTC 59.105 54.545 0.00 0.00 0.00 2.75
2927 3218 2.520549 AGGAGGGCTAGGAGTGTTATCT 59.479 50.000 0.00 0.00 0.00 1.98
2928 3219 2.894765 GAGGAGGGCTAGGAGTGTTATC 59.105 54.545 0.00 0.00 0.00 1.75
2929 3220 2.520549 AGAGGAGGGCTAGGAGTGTTAT 59.479 50.000 0.00 0.00 0.00 1.89
2930 3221 1.930914 AGAGGAGGGCTAGGAGTGTTA 59.069 52.381 0.00 0.00 0.00 2.41
2931 3222 0.713579 AGAGGAGGGCTAGGAGTGTT 59.286 55.000 0.00 0.00 0.00 3.32
2932 3223 0.032615 CAGAGGAGGGCTAGGAGTGT 60.033 60.000 0.00 0.00 0.00 3.55
2933 3224 1.398958 GCAGAGGAGGGCTAGGAGTG 61.399 65.000 0.00 0.00 0.00 3.51
2934 3225 1.075600 GCAGAGGAGGGCTAGGAGT 60.076 63.158 0.00 0.00 0.00 3.85
2935 3226 2.199652 CGCAGAGGAGGGCTAGGAG 61.200 68.421 0.00 0.00 0.00 3.69
2936 3227 2.123683 CGCAGAGGAGGGCTAGGA 60.124 66.667 0.00 0.00 0.00 2.94
2943 3234 3.151022 GGAGACCCGCAGAGGAGG 61.151 72.222 0.00 0.00 45.00 4.30
2955 3246 4.371786 TGATTTAGTGATCATGCGGAGAC 58.628 43.478 0.00 0.00 31.35 3.36
2956 3247 4.670896 TGATTTAGTGATCATGCGGAGA 57.329 40.909 0.00 0.00 31.35 3.71
2958 3249 4.512484 TGTTGATTTAGTGATCATGCGGA 58.488 39.130 0.00 0.00 36.05 5.54
2959 3250 4.880886 TGTTGATTTAGTGATCATGCGG 57.119 40.909 0.00 0.00 36.05 5.69
2960 3251 5.684184 CCATTGTTGATTTAGTGATCATGCG 59.316 40.000 0.00 0.00 36.05 4.73
2961 3252 6.474427 CACCATTGTTGATTTAGTGATCATGC 59.526 38.462 0.00 0.00 36.05 4.06
2962 3253 7.699391 GTCACCATTGTTGATTTAGTGATCATG 59.301 37.037 0.00 0.00 36.05 3.07
2963 3254 7.613022 AGTCACCATTGTTGATTTAGTGATCAT 59.387 33.333 0.00 0.00 36.05 2.45
2964 3255 6.942005 AGTCACCATTGTTGATTTAGTGATCA 59.058 34.615 0.00 0.00 35.45 2.92
2965 3256 7.383102 AGTCACCATTGTTGATTTAGTGATC 57.617 36.000 0.00 0.00 35.45 2.92
2966 3257 7.882791 TGTAGTCACCATTGTTGATTTAGTGAT 59.117 33.333 0.00 0.00 35.45 3.06
2967 3258 7.220740 TGTAGTCACCATTGTTGATTTAGTGA 58.779 34.615 0.00 0.00 0.00 3.41
2968 3259 7.433708 TGTAGTCACCATTGTTGATTTAGTG 57.566 36.000 0.00 0.00 0.00 2.74
2969 3260 7.308589 GCTTGTAGTCACCATTGTTGATTTAGT 60.309 37.037 0.00 0.00 0.00 2.24
2972 3263 5.536161 AGCTTGTAGTCACCATTGTTGATTT 59.464 36.000 0.00 0.00 0.00 2.17
2973 3264 5.072741 AGCTTGTAGTCACCATTGTTGATT 58.927 37.500 0.00 0.00 0.00 2.57
2974 3265 4.655963 AGCTTGTAGTCACCATTGTTGAT 58.344 39.130 0.00 0.00 0.00 2.57
2976 3267 4.539870 CAAGCTTGTAGTCACCATTGTTG 58.460 43.478 18.65 0.00 0.00 3.33
2978 3269 2.554032 GCAAGCTTGTAGTCACCATTGT 59.446 45.455 26.55 0.00 0.00 2.71
2980 3271 3.077359 GAGCAAGCTTGTAGTCACCATT 58.923 45.455 26.55 1.44 0.00 3.16
2982 3273 1.270839 GGAGCAAGCTTGTAGTCACCA 60.271 52.381 26.55 0.00 0.00 4.17
2983 3274 1.002544 AGGAGCAAGCTTGTAGTCACC 59.997 52.381 26.55 17.03 0.00 4.02
2985 3276 2.368548 TCAAGGAGCAAGCTTGTAGTCA 59.631 45.455 26.55 3.73 0.00 3.41
2987 3278 2.370189 ACTCAAGGAGCAAGCTTGTAGT 59.630 45.455 26.55 12.54 32.04 2.73
2990 3281 1.952296 CAACTCAAGGAGCAAGCTTGT 59.048 47.619 26.55 14.02 32.04 3.16
2992 3283 2.355010 ACAACTCAAGGAGCAAGCTT 57.645 45.000 0.00 0.00 32.04 3.74
2996 3287 4.156455 AGAGAAACAACTCAAGGAGCAA 57.844 40.909 0.00 0.00 39.14 3.91
2997 3288 3.845781 AGAGAAACAACTCAAGGAGCA 57.154 42.857 0.00 0.00 39.14 4.26
2998 3289 5.140747 TCTAGAGAAACAACTCAAGGAGC 57.859 43.478 0.00 0.00 39.14 4.70
3000 3291 5.394738 TCCTCTAGAGAAACAACTCAAGGA 58.605 41.667 21.76 2.87 38.63 3.36
3001 3292 5.337169 CCTCCTCTAGAGAAACAACTCAAGG 60.337 48.000 21.76 7.55 46.50 3.61
3002 3293 5.478679 TCCTCCTCTAGAGAAACAACTCAAG 59.521 44.000 21.76 0.00 46.50 3.02
3003 3294 5.394738 TCCTCCTCTAGAGAAACAACTCAA 58.605 41.667 21.76 0.00 46.50 3.02
3006 3297 5.646215 TCTTCCTCCTCTAGAGAAACAACT 58.354 41.667 21.76 0.00 46.50 3.16
3007 3298 5.986501 TCTTCCTCCTCTAGAGAAACAAC 57.013 43.478 21.76 0.00 46.50 3.32
3008 3299 6.315714 TCTTCTTCCTCCTCTAGAGAAACAA 58.684 40.000 21.76 7.52 46.50 2.83
3015 3589 5.020132 CCTTGTTCTTCTTCCTCCTCTAGA 58.980 45.833 0.00 0.00 0.00 2.43
3018 3592 2.304470 GCCTTGTTCTTCTTCCTCCTCT 59.696 50.000 0.00 0.00 0.00 3.69
3021 3595 2.869101 AGCCTTGTTCTTCTTCCTCC 57.131 50.000 0.00 0.00 0.00 4.30
3028 3602 3.186702 CTAGGGCTAGCCTTGTTCTTC 57.813 52.381 32.18 13.65 36.10 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.