Multiple sequence alignment - TraesCS7D01G182200
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G182200 | chr7D | 100.000 | 4436 | 0 | 0 | 1 | 4436 | 135766089 | 135761654 | 0.000000e+00 | 8192.0 |
1 | TraesCS7D01G182200 | chr7D | 99.093 | 3307 | 18 | 2 | 376 | 3670 | 135767329 | 135770635 | 0.000000e+00 | 5930.0 |
2 | TraesCS7D01G182200 | chr7D | 98.851 | 3307 | 26 | 2 | 376 | 3670 | 23561318 | 23564624 | 0.000000e+00 | 5886.0 |
3 | TraesCS7D01G182200 | chr7D | 98.639 | 3307 | 32 | 3 | 376 | 3670 | 14172774 | 14169469 | 0.000000e+00 | 5845.0 |
4 | TraesCS7D01G182200 | chr7D | 98.458 | 3307 | 38 | 3 | 376 | 3670 | 400293439 | 400290134 | 0.000000e+00 | 5812.0 |
5 | TraesCS7D01G182200 | chr7D | 83.854 | 384 | 48 | 9 | 1 | 377 | 135437817 | 135437441 | 1.960000e-93 | 353.0 |
6 | TraesCS7D01G182200 | chr7D | 89.139 | 267 | 26 | 1 | 3694 | 3960 | 135437427 | 135437164 | 3.310000e-86 | 329.0 |
7 | TraesCS7D01G182200 | chr2D | 98.760 | 3307 | 29 | 2 | 376 | 3670 | 35063256 | 35059950 | 0.000000e+00 | 5869.0 |
8 | TraesCS7D01G182200 | chr2D | 98.517 | 3305 | 34 | 4 | 378 | 3670 | 70661127 | 70657826 | 0.000000e+00 | 5818.0 |
9 | TraesCS7D01G182200 | chr5D | 98.639 | 3306 | 33 | 2 | 377 | 3670 | 460676228 | 460679533 | 0.000000e+00 | 5845.0 |
10 | TraesCS7D01G182200 | chr6D | 98.310 | 3314 | 34 | 6 | 376 | 3669 | 402532977 | 402529666 | 0.000000e+00 | 5790.0 |
11 | TraesCS7D01G182200 | chr6B | 97.884 | 3308 | 57 | 3 | 376 | 3670 | 9820631 | 9823938 | 0.000000e+00 | 5709.0 |
12 | TraesCS7D01G182200 | chr6B | 96.771 | 3314 | 75 | 9 | 376 | 3671 | 719770425 | 719767126 | 0.000000e+00 | 5498.0 |
13 | TraesCS7D01G182200 | chrUn | 98.370 | 2638 | 29 | 3 | 359 | 2983 | 95716931 | 95719567 | 0.000000e+00 | 4621.0 |
14 | TraesCS7D01G182200 | chr7B | 96.335 | 382 | 13 | 1 | 1 | 382 | 97673671 | 97673291 | 1.050000e-175 | 627.0 |
15 | TraesCS7D01G182200 | chr7B | 95.588 | 340 | 15 | 0 | 3671 | 4010 | 97673304 | 97672965 | 3.020000e-151 | 545.0 |
16 | TraesCS7D01G182200 | chr7B | 83.812 | 383 | 50 | 10 | 1 | 377 | 97376880 | 97376504 | 1.960000e-93 | 353.0 |
17 | TraesCS7D01G182200 | chr7B | 77.873 | 583 | 86 | 28 | 3673 | 4247 | 97376103 | 97375556 | 5.540000e-84 | 322.0 |
18 | TraesCS7D01G182200 | chr7B | 95.833 | 96 | 3 | 1 | 4074 | 4168 | 97664369 | 97664274 | 2.140000e-33 | 154.0 |
19 | TraesCS7D01G182200 | chr7A | 95.122 | 369 | 5 | 3 | 372 | 728 | 632039273 | 632038906 | 1.790000e-158 | 569.0 |
20 | TraesCS7D01G182200 | chr7A | 93.313 | 329 | 22 | 0 | 47 | 375 | 134704447 | 134704119 | 1.850000e-133 | 486.0 |
21 | TraesCS7D01G182200 | chr7A | 87.285 | 291 | 28 | 7 | 3673 | 3960 | 134571120 | 134570836 | 1.540000e-84 | 324.0 |
22 | TraesCS7D01G182200 | chr7A | 82.461 | 382 | 56 | 10 | 1 | 377 | 134571488 | 134571113 | 1.540000e-84 | 324.0 |
23 | TraesCS7D01G182200 | chr7A | 83.281 | 317 | 51 | 2 | 3671 | 3986 | 134570714 | 134570399 | 1.560000e-74 | 291.0 |
24 | TraesCS7D01G182200 | chr7A | 92.683 | 41 | 3 | 0 | 3671 | 3711 | 134704126 | 134704086 | 4.790000e-05 | 60.2 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G182200 | chr7D | 135761654 | 135766089 | 4435 | True | 8192.0 | 8192 | 100.000000 | 1 | 4436 | 1 | chr7D.!!$R2 | 4435 |
1 | TraesCS7D01G182200 | chr7D | 135767329 | 135770635 | 3306 | False | 5930.0 | 5930 | 99.093000 | 376 | 3670 | 1 | chr7D.!!$F2 | 3294 |
2 | TraesCS7D01G182200 | chr7D | 23561318 | 23564624 | 3306 | False | 5886.0 | 5886 | 98.851000 | 376 | 3670 | 1 | chr7D.!!$F1 | 3294 |
3 | TraesCS7D01G182200 | chr7D | 14169469 | 14172774 | 3305 | True | 5845.0 | 5845 | 98.639000 | 376 | 3670 | 1 | chr7D.!!$R1 | 3294 |
4 | TraesCS7D01G182200 | chr7D | 400290134 | 400293439 | 3305 | True | 5812.0 | 5812 | 98.458000 | 376 | 3670 | 1 | chr7D.!!$R3 | 3294 |
5 | TraesCS7D01G182200 | chr7D | 135437164 | 135437817 | 653 | True | 341.0 | 353 | 86.496500 | 1 | 3960 | 2 | chr7D.!!$R4 | 3959 |
6 | TraesCS7D01G182200 | chr2D | 35059950 | 35063256 | 3306 | True | 5869.0 | 5869 | 98.760000 | 376 | 3670 | 1 | chr2D.!!$R1 | 3294 |
7 | TraesCS7D01G182200 | chr2D | 70657826 | 70661127 | 3301 | True | 5818.0 | 5818 | 98.517000 | 378 | 3670 | 1 | chr2D.!!$R2 | 3292 |
8 | TraesCS7D01G182200 | chr5D | 460676228 | 460679533 | 3305 | False | 5845.0 | 5845 | 98.639000 | 377 | 3670 | 1 | chr5D.!!$F1 | 3293 |
9 | TraesCS7D01G182200 | chr6D | 402529666 | 402532977 | 3311 | True | 5790.0 | 5790 | 98.310000 | 376 | 3669 | 1 | chr6D.!!$R1 | 3293 |
10 | TraesCS7D01G182200 | chr6B | 9820631 | 9823938 | 3307 | False | 5709.0 | 5709 | 97.884000 | 376 | 3670 | 1 | chr6B.!!$F1 | 3294 |
11 | TraesCS7D01G182200 | chr6B | 719767126 | 719770425 | 3299 | True | 5498.0 | 5498 | 96.771000 | 376 | 3671 | 1 | chr6B.!!$R1 | 3295 |
12 | TraesCS7D01G182200 | chrUn | 95716931 | 95719567 | 2636 | False | 4621.0 | 4621 | 98.370000 | 359 | 2983 | 1 | chrUn.!!$F1 | 2624 |
13 | TraesCS7D01G182200 | chr7B | 97672965 | 97673671 | 706 | True | 586.0 | 627 | 95.961500 | 1 | 4010 | 2 | chr7B.!!$R3 | 4009 |
14 | TraesCS7D01G182200 | chr7B | 97375556 | 97376880 | 1324 | True | 337.5 | 353 | 80.842500 | 1 | 4247 | 2 | chr7B.!!$R2 | 4246 |
15 | TraesCS7D01G182200 | chr7A | 134570399 | 134571488 | 1089 | True | 313.0 | 324 | 84.342333 | 1 | 3986 | 3 | chr7A.!!$R2 | 3985 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
346 | 358 | 0.035056 | ATCAACCTGCACAGCTACCC | 60.035 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 | F |
347 | 359 | 1.675641 | CAACCTGCACAGCTACCCC | 60.676 | 63.158 | 0.00 | 0.00 | 0.00 | 4.95 | F |
356 | 368 | 1.764054 | CAGCTACCCCAGGGAGGAG | 60.764 | 68.421 | 7.25 | 4.24 | 41.22 | 3.69 | F |
358 | 370 | 2.840102 | CTACCCCAGGGAGGAGCG | 60.840 | 72.222 | 7.25 | 0.00 | 41.22 | 5.03 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1321 | 1356 | 7.592885 | AGTAATCATATGAAAAATGCCTGCT | 57.407 | 32.000 | 9.99 | 0.00 | 0.00 | 4.24 | R |
3062 | 3719 | 5.105023 | ACATCTGCTGACTTATCATGAGTGT | 60.105 | 40.000 | 0.09 | 0.00 | 33.22 | 3.55 | R |
3071 | 3728 | 6.000840 | TCTAGATCGACATCTGCTGACTTAT | 58.999 | 40.000 | 0.00 | 0.00 | 39.90 | 1.73 | R |
3437 | 4099 | 4.510167 | AATAGCATGCTAACCTCCAGTT | 57.490 | 40.909 | 30.06 | 14.83 | 42.83 | 3.16 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
23 | 24 | 3.003173 | CTGCAGAGGACCCCCGAA | 61.003 | 66.667 | 8.42 | 0.00 | 37.58 | 4.30 |
292 | 304 | 3.393970 | CGAGGGGCAGCAGAGGAA | 61.394 | 66.667 | 0.00 | 0.00 | 0.00 | 3.36 |
293 | 305 | 2.270527 | GAGGGGCAGCAGAGGAAC | 59.729 | 66.667 | 0.00 | 0.00 | 0.00 | 3.62 |
303 | 315 | 2.277858 | CAGAGGAACTGCTACCGGT | 58.722 | 57.895 | 13.98 | 13.98 | 41.55 | 5.28 |
304 | 316 | 0.173708 | CAGAGGAACTGCTACCGGTC | 59.826 | 60.000 | 12.40 | 0.00 | 41.55 | 4.79 |
305 | 317 | 0.971447 | AGAGGAACTGCTACCGGTCC | 60.971 | 60.000 | 12.40 | 3.70 | 41.55 | 4.46 |
306 | 318 | 1.957765 | GAGGAACTGCTACCGGTCCC | 61.958 | 65.000 | 12.40 | 3.40 | 41.55 | 4.46 |
307 | 319 | 2.183555 | GAACTGCTACCGGTCCCG | 59.816 | 66.667 | 12.40 | 1.45 | 39.44 | 5.14 |
320 | 332 | 3.965660 | TCCCGGCTGGATTACCTC | 58.034 | 61.111 | 15.09 | 0.00 | 38.61 | 3.85 |
321 | 333 | 2.131709 | TCCCGGCTGGATTACCTCG | 61.132 | 63.158 | 15.09 | 0.00 | 38.61 | 4.63 |
322 | 334 | 2.432300 | CCCGGCTGGATTACCTCGT | 61.432 | 63.158 | 15.09 | 0.00 | 37.49 | 4.18 |
323 | 335 | 1.067582 | CCGGCTGGATTACCTCGTC | 59.932 | 63.158 | 5.28 | 0.00 | 37.49 | 4.20 |
324 | 336 | 1.067582 | CGGCTGGATTACCTCGTCC | 59.932 | 63.158 | 0.00 | 0.00 | 37.04 | 4.79 |
325 | 337 | 1.672854 | CGGCTGGATTACCTCGTCCA | 61.673 | 60.000 | 0.00 | 0.00 | 42.03 | 4.02 |
326 | 338 | 0.179081 | GGCTGGATTACCTCGTCCAC | 60.179 | 60.000 | 0.00 | 0.00 | 39.51 | 4.02 |
327 | 339 | 0.535335 | GCTGGATTACCTCGTCCACA | 59.465 | 55.000 | 0.00 | 0.00 | 39.51 | 4.17 |
328 | 340 | 1.139058 | GCTGGATTACCTCGTCCACAT | 59.861 | 52.381 | 0.00 | 0.00 | 39.51 | 3.21 |
329 | 341 | 2.803492 | GCTGGATTACCTCGTCCACATC | 60.803 | 54.545 | 0.00 | 0.00 | 39.51 | 3.06 |
330 | 342 | 2.430694 | CTGGATTACCTCGTCCACATCA | 59.569 | 50.000 | 0.00 | 0.00 | 39.51 | 3.07 |
331 | 343 | 2.835156 | TGGATTACCTCGTCCACATCAA | 59.165 | 45.455 | 0.00 | 0.00 | 39.51 | 2.57 |
332 | 344 | 3.195661 | GGATTACCTCGTCCACATCAAC | 58.804 | 50.000 | 0.00 | 0.00 | 34.57 | 3.18 |
333 | 345 | 2.754946 | TTACCTCGTCCACATCAACC | 57.245 | 50.000 | 0.00 | 0.00 | 0.00 | 3.77 |
334 | 346 | 1.933021 | TACCTCGTCCACATCAACCT | 58.067 | 50.000 | 0.00 | 0.00 | 0.00 | 3.50 |
335 | 347 | 0.321671 | ACCTCGTCCACATCAACCTG | 59.678 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
336 | 348 | 1.021390 | CCTCGTCCACATCAACCTGC | 61.021 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
337 | 349 | 0.320683 | CTCGTCCACATCAACCTGCA | 60.321 | 55.000 | 0.00 | 0.00 | 0.00 | 4.41 |
338 | 350 | 0.602638 | TCGTCCACATCAACCTGCAC | 60.603 | 55.000 | 0.00 | 0.00 | 0.00 | 4.57 |
339 | 351 | 0.884259 | CGTCCACATCAACCTGCACA | 60.884 | 55.000 | 0.00 | 0.00 | 0.00 | 4.57 |
340 | 352 | 0.877071 | GTCCACATCAACCTGCACAG | 59.123 | 55.000 | 0.00 | 0.00 | 0.00 | 3.66 |
341 | 353 | 0.890542 | TCCACATCAACCTGCACAGC | 60.891 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
342 | 354 | 0.892358 | CCACATCAACCTGCACAGCT | 60.892 | 55.000 | 0.00 | 0.00 | 0.00 | 4.24 |
343 | 355 | 1.611410 | CCACATCAACCTGCACAGCTA | 60.611 | 52.381 | 0.00 | 0.00 | 0.00 | 3.32 |
344 | 356 | 1.466167 | CACATCAACCTGCACAGCTAC | 59.534 | 52.381 | 0.00 | 0.00 | 0.00 | 3.58 |
345 | 357 | 1.089920 | CATCAACCTGCACAGCTACC | 58.910 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
346 | 358 | 0.035056 | ATCAACCTGCACAGCTACCC | 60.035 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 |
347 | 359 | 1.675641 | CAACCTGCACAGCTACCCC | 60.676 | 63.158 | 0.00 | 0.00 | 0.00 | 4.95 |
348 | 360 | 2.153401 | AACCTGCACAGCTACCCCA | 61.153 | 57.895 | 0.00 | 0.00 | 0.00 | 4.96 |
349 | 361 | 2.129555 | AACCTGCACAGCTACCCCAG | 62.130 | 60.000 | 0.00 | 0.00 | 0.00 | 4.45 |
350 | 362 | 2.270205 | CTGCACAGCTACCCCAGG | 59.730 | 66.667 | 0.00 | 0.00 | 0.00 | 4.45 |
351 | 363 | 3.329889 | TGCACAGCTACCCCAGGG | 61.330 | 66.667 | 0.00 | 0.00 | 42.03 | 4.45 |
352 | 364 | 3.009115 | GCACAGCTACCCCAGGGA | 61.009 | 66.667 | 7.25 | 0.00 | 38.96 | 4.20 |
353 | 365 | 3.036429 | GCACAGCTACCCCAGGGAG | 62.036 | 68.421 | 7.25 | 0.00 | 38.96 | 4.30 |
354 | 366 | 2.041265 | ACAGCTACCCCAGGGAGG | 59.959 | 66.667 | 7.25 | 2.54 | 38.96 | 4.30 |
355 | 367 | 2.368594 | CAGCTACCCCAGGGAGGA | 59.631 | 66.667 | 7.25 | 0.00 | 41.22 | 3.71 |
356 | 368 | 1.764054 | CAGCTACCCCAGGGAGGAG | 60.764 | 68.421 | 7.25 | 4.24 | 41.22 | 3.69 |
357 | 369 | 3.164977 | GCTACCCCAGGGAGGAGC | 61.165 | 72.222 | 7.25 | 11.44 | 41.22 | 4.70 |
358 | 370 | 2.840102 | CTACCCCAGGGAGGAGCG | 60.840 | 72.222 | 7.25 | 0.00 | 41.22 | 5.03 |
359 | 371 | 4.475444 | TACCCCAGGGAGGAGCGG | 62.475 | 72.222 | 7.25 | 0.00 | 41.22 | 5.52 |
368 | 380 | 4.214327 | GAGGAGCGGGCGGAGAAG | 62.214 | 72.222 | 0.00 | 0.00 | 0.00 | 2.85 |
371 | 383 | 4.516195 | GAGCGGGCGGAGAAGGAC | 62.516 | 72.222 | 0.00 | 0.00 | 0.00 | 3.85 |
373 | 385 | 4.162690 | GCGGGCGGAGAAGGACAT | 62.163 | 66.667 | 0.00 | 0.00 | 0.00 | 3.06 |
585 | 602 | 4.347453 | CAAGCCCAGGCAACACGC | 62.347 | 66.667 | 12.03 | 0.00 | 44.88 | 5.34 |
819 | 854 | 9.667107 | CCTAATCTATAGGCAAATATTTTCCGA | 57.333 | 33.333 | 10.67 | 6.67 | 0.00 | 4.55 |
847 | 882 | 7.148440 | GGTCTCAATTCTGAAACTTCTCATCTG | 60.148 | 40.741 | 0.00 | 0.00 | 0.00 | 2.90 |
1017 | 1052 | 4.843728 | TGGATATGTTTGTCTTGAGGACC | 58.156 | 43.478 | 0.00 | 0.00 | 43.89 | 4.46 |
1321 | 1356 | 7.162761 | TGTGTTTCCCGAAGATGAAATTAGTA | 58.837 | 34.615 | 0.00 | 0.00 | 32.57 | 1.82 |
3062 | 3719 | 8.932945 | TGTTGCACTAATTTTGTCAACAAATA | 57.067 | 26.923 | 17.36 | 0.07 | 44.30 | 1.40 |
3671 | 4333 | 1.190833 | ATCATAGAGCCGGCCCTGAG | 61.191 | 60.000 | 26.15 | 14.12 | 0.00 | 3.35 |
3672 | 4334 | 2.525381 | ATAGAGCCGGCCCTGAGG | 60.525 | 66.667 | 26.15 | 0.00 | 0.00 | 3.86 |
3673 | 4335 | 3.088090 | ATAGAGCCGGCCCTGAGGA | 62.088 | 63.158 | 26.15 | 0.37 | 33.47 | 3.71 |
3677 | 4339 | 4.554036 | GCCGGCCCTGAGGACATC | 62.554 | 72.222 | 18.11 | 0.00 | 44.30 | 3.06 |
3678 | 4340 | 4.227134 | CCGGCCCTGAGGACATCG | 62.227 | 72.222 | 0.00 | 0.00 | 44.30 | 3.84 |
3679 | 4341 | 4.227134 | CGGCCCTGAGGACATCGG | 62.227 | 72.222 | 0.00 | 0.00 | 44.30 | 4.18 |
3680 | 4342 | 4.554036 | GGCCCTGAGGACATCGGC | 62.554 | 72.222 | 0.00 | 0.00 | 43.07 | 5.54 |
3681 | 4343 | 3.474570 | GCCCTGAGGACATCGGCT | 61.475 | 66.667 | 0.00 | 0.00 | 37.93 | 5.52 |
3682 | 4344 | 3.036429 | GCCCTGAGGACATCGGCTT | 62.036 | 63.158 | 0.00 | 0.00 | 37.93 | 4.35 |
3839 | 4501 | 0.523335 | GTTTTTATGGCAGCGGCGAG | 60.523 | 55.000 | 12.98 | 2.55 | 42.47 | 5.03 |
3870 | 4532 | 2.854214 | GAAGTCGCTCGCAGCATCG | 61.854 | 63.158 | 8.52 | 0.00 | 42.58 | 3.84 |
3998 | 4660 | 4.843220 | GCTCATGCAGCTAACCAATAAT | 57.157 | 40.909 | 9.16 | 0.00 | 45.83 | 1.28 |
3999 | 4661 | 5.192327 | GCTCATGCAGCTAACCAATAATT | 57.808 | 39.130 | 9.16 | 0.00 | 45.83 | 1.40 |
4000 | 4662 | 4.980434 | GCTCATGCAGCTAACCAATAATTG | 59.020 | 41.667 | 9.16 | 0.00 | 45.83 | 2.32 |
4001 | 4663 | 5.450965 | GCTCATGCAGCTAACCAATAATTGT | 60.451 | 40.000 | 9.16 | 0.00 | 45.83 | 2.71 |
4002 | 4664 | 5.893687 | TCATGCAGCTAACCAATAATTGTG | 58.106 | 37.500 | 0.00 | 0.00 | 0.00 | 3.33 |
4003 | 4665 | 4.717233 | TGCAGCTAACCAATAATTGTGG | 57.283 | 40.909 | 8.14 | 8.14 | 42.28 | 4.17 |
4010 | 4672 | 3.825908 | ACCAATAATTGTGGTCTGGGT | 57.174 | 42.857 | 9.29 | 0.00 | 46.79 | 4.51 |
4011 | 4673 | 3.697166 | ACCAATAATTGTGGTCTGGGTC | 58.303 | 45.455 | 9.29 | 0.00 | 46.79 | 4.46 |
4012 | 4674 | 3.075283 | ACCAATAATTGTGGTCTGGGTCA | 59.925 | 43.478 | 9.29 | 0.00 | 46.79 | 4.02 |
4013 | 4675 | 4.264352 | ACCAATAATTGTGGTCTGGGTCAT | 60.264 | 41.667 | 9.29 | 0.00 | 46.79 | 3.06 |
4014 | 4676 | 4.098349 | CCAATAATTGTGGTCTGGGTCATG | 59.902 | 45.833 | 2.53 | 0.00 | 0.00 | 3.07 |
4015 | 4677 | 1.549203 | AATTGTGGTCTGGGTCATGC | 58.451 | 50.000 | 0.00 | 0.00 | 0.00 | 4.06 |
4016 | 4678 | 0.405198 | ATTGTGGTCTGGGTCATGCA | 59.595 | 50.000 | 0.00 | 0.00 | 0.00 | 3.96 |
4017 | 4679 | 0.250858 | TTGTGGTCTGGGTCATGCAG | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 4.41 |
4018 | 4680 | 2.042831 | GTGGTCTGGGTCATGCAGC | 61.043 | 63.158 | 0.00 | 0.00 | 0.00 | 5.25 |
4019 | 4681 | 2.226315 | TGGTCTGGGTCATGCAGCT | 61.226 | 57.895 | 0.00 | 0.00 | 0.00 | 4.24 |
4020 | 4682 | 0.909133 | TGGTCTGGGTCATGCAGCTA | 60.909 | 55.000 | 0.00 | 0.00 | 0.00 | 3.32 |
4023 | 4685 | 0.253044 | TCTGGGTCATGCAGCTAACC | 59.747 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
4031 | 4693 | 4.319766 | GGTCATGCAGCTAACCAATAATCG | 60.320 | 45.833 | 0.00 | 0.00 | 0.00 | 3.34 |
4041 | 4703 | 1.913419 | ACCAATAATCGTGGTCTGGGT | 59.087 | 47.619 | 0.00 | 0.00 | 46.79 | 4.51 |
4042 | 4704 | 2.093128 | ACCAATAATCGTGGTCTGGGTC | 60.093 | 50.000 | 0.00 | 0.00 | 46.79 | 4.46 |
4043 | 4705 | 2.561569 | CAATAATCGTGGTCTGGGTCC | 58.438 | 52.381 | 0.00 | 0.00 | 0.00 | 4.46 |
4044 | 4706 | 2.170607 | CAATAATCGTGGTCTGGGTCCT | 59.829 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4045 | 4707 | 1.481871 | TAATCGTGGTCTGGGTCCTC | 58.518 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
4046 | 4708 | 1.605058 | AATCGTGGTCTGGGTCCTCG | 61.605 | 60.000 | 0.00 | 0.00 | 41.38 | 4.63 |
4047 | 4709 | 3.760035 | CGTGGTCTGGGTCCTCGG | 61.760 | 72.222 | 0.00 | 0.00 | 38.00 | 4.63 |
4048 | 4710 | 4.083862 | GTGGTCTGGGTCCTCGGC | 62.084 | 72.222 | 0.00 | 0.00 | 0.00 | 5.54 |
4063 | 4725 | 0.245539 | TCGGCGACCTTTGGTTAGAG | 59.754 | 55.000 | 4.99 | 0.00 | 35.25 | 2.43 |
4064 | 4726 | 1.359459 | CGGCGACCTTTGGTTAGAGC | 61.359 | 60.000 | 0.00 | 0.00 | 35.25 | 4.09 |
4066 | 4728 | 1.079503 | GCGACCTTTGGTTAGAGCTG | 58.920 | 55.000 | 0.00 | 0.00 | 35.25 | 4.24 |
4067 | 4729 | 1.079503 | CGACCTTTGGTTAGAGCTGC | 58.920 | 55.000 | 0.00 | 0.00 | 35.25 | 5.25 |
4068 | 4730 | 1.338200 | CGACCTTTGGTTAGAGCTGCT | 60.338 | 52.381 | 0.00 | 0.00 | 35.25 | 4.24 |
4069 | 4731 | 2.784347 | GACCTTTGGTTAGAGCTGCTT | 58.216 | 47.619 | 2.53 | 0.00 | 35.25 | 3.91 |
4071 | 4733 | 4.324267 | GACCTTTGGTTAGAGCTGCTTAA | 58.676 | 43.478 | 2.53 | 2.06 | 35.25 | 1.85 |
4073 | 4735 | 5.325239 | ACCTTTGGTTAGAGCTGCTTAATT | 58.675 | 37.500 | 2.53 | 0.00 | 27.29 | 1.40 |
4094 | 4759 | 0.621082 | AGCTTCCAGGTTTCCCTAGC | 59.379 | 55.000 | 0.00 | 0.00 | 39.89 | 3.42 |
4095 | 4760 | 0.621082 | GCTTCCAGGTTTCCCTAGCT | 59.379 | 55.000 | 0.00 | 0.00 | 39.89 | 3.32 |
4097 | 4762 | 2.555448 | GCTTCCAGGTTTCCCTAGCTTT | 60.555 | 50.000 | 0.00 | 0.00 | 39.89 | 3.51 |
4114 | 4779 | 3.053842 | AGCTTTCATGGATCACAGACCAT | 60.054 | 43.478 | 0.00 | 0.00 | 46.22 | 3.55 |
4115 | 4780 | 4.164796 | AGCTTTCATGGATCACAGACCATA | 59.835 | 41.667 | 0.00 | 0.00 | 43.89 | 2.74 |
4116 | 4781 | 4.274459 | GCTTTCATGGATCACAGACCATAC | 59.726 | 45.833 | 0.00 | 0.00 | 43.89 | 2.39 |
4117 | 4782 | 4.422073 | TTCATGGATCACAGACCATACC | 57.578 | 45.455 | 0.00 | 0.00 | 43.89 | 2.73 |
4119 | 4784 | 3.389002 | TCATGGATCACAGACCATACCAG | 59.611 | 47.826 | 0.00 | 0.00 | 43.89 | 4.00 |
4120 | 4785 | 1.486310 | TGGATCACAGACCATACCAGC | 59.514 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
4122 | 4787 | 2.171448 | GGATCACAGACCATACCAGCTT | 59.829 | 50.000 | 0.00 | 0.00 | 0.00 | 3.74 |
4123 | 4788 | 3.388024 | GGATCACAGACCATACCAGCTTA | 59.612 | 47.826 | 0.00 | 0.00 | 0.00 | 3.09 |
4124 | 4789 | 4.502259 | GGATCACAGACCATACCAGCTTAG | 60.502 | 50.000 | 0.00 | 0.00 | 0.00 | 2.18 |
4125 | 4790 | 3.441101 | TCACAGACCATACCAGCTTAGT | 58.559 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
4126 | 4791 | 3.838317 | TCACAGACCATACCAGCTTAGTT | 59.162 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
4127 | 4792 | 5.020795 | TCACAGACCATACCAGCTTAGTTA | 58.979 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
4128 | 4793 | 5.661312 | TCACAGACCATACCAGCTTAGTTAT | 59.339 | 40.000 | 0.00 | 0.00 | 0.00 | 1.89 |
4129 | 4794 | 5.755375 | CACAGACCATACCAGCTTAGTTATG | 59.245 | 44.000 | 0.00 | 0.00 | 0.00 | 1.90 |
4130 | 4795 | 5.425539 | ACAGACCATACCAGCTTAGTTATGT | 59.574 | 40.000 | 0.00 | 0.00 | 0.00 | 2.29 |
4131 | 4796 | 6.610020 | ACAGACCATACCAGCTTAGTTATGTA | 59.390 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
4132 | 4797 | 7.148641 | CAGACCATACCAGCTTAGTTATGTAG | 58.851 | 42.308 | 0.00 | 0.00 | 0.00 | 2.74 |
4133 | 4798 | 6.839657 | AGACCATACCAGCTTAGTTATGTAGT | 59.160 | 38.462 | 0.00 | 0.00 | 0.00 | 2.73 |
4134 | 4799 | 8.003044 | AGACCATACCAGCTTAGTTATGTAGTA | 58.997 | 37.037 | 0.00 | 0.00 | 0.00 | 1.82 |
4135 | 4800 | 7.949434 | ACCATACCAGCTTAGTTATGTAGTAC | 58.051 | 38.462 | 0.00 | 0.00 | 0.00 | 2.73 |
4136 | 4801 | 7.783596 | ACCATACCAGCTTAGTTATGTAGTACT | 59.216 | 37.037 | 0.00 | 0.00 | 0.00 | 2.73 |
4137 | 4802 | 9.293404 | CCATACCAGCTTAGTTATGTAGTACTA | 57.707 | 37.037 | 0.00 | 0.00 | 0.00 | 1.82 |
4140 | 4805 | 8.449251 | ACCAGCTTAGTTATGTAGTACTACTC | 57.551 | 38.462 | 28.56 | 17.60 | 37.00 | 2.59 |
4141 | 4806 | 7.501892 | ACCAGCTTAGTTATGTAGTACTACTCC | 59.498 | 40.741 | 28.56 | 15.76 | 37.00 | 3.85 |
4151 | 4816 | 2.641305 | AGTACTACTCCGTAGTGGCTG | 58.359 | 52.381 | 14.99 | 0.00 | 46.99 | 4.85 |
4155 | 4820 | 1.651240 | TACTCCGTAGTGGCTGCGAC | 61.651 | 60.000 | 6.69 | 6.69 | 41.80 | 5.19 |
4169 | 4834 | 0.386858 | TGCGACGACAGCAAGTAGTC | 60.387 | 55.000 | 0.00 | 10.93 | 45.84 | 2.59 |
4170 | 4835 | 0.109689 | GCGACGACAGCAAGTAGTCT | 60.110 | 55.000 | 16.27 | 0.00 | 46.74 | 3.24 |
4171 | 4836 | 1.884756 | CGACGACAGCAAGTAGTCTC | 58.115 | 55.000 | 16.27 | 0.00 | 46.74 | 3.36 |
4177 | 4843 | 4.944930 | ACGACAGCAAGTAGTCTCTCTATT | 59.055 | 41.667 | 0.00 | 0.00 | 29.38 | 1.73 |
4178 | 4844 | 6.114089 | ACGACAGCAAGTAGTCTCTCTATTA | 58.886 | 40.000 | 0.00 | 0.00 | 29.38 | 0.98 |
4184 | 4850 | 8.894731 | CAGCAAGTAGTCTCTCTATTAGTAACA | 58.105 | 37.037 | 0.00 | 0.00 | 0.00 | 2.41 |
4185 | 4851 | 9.116067 | AGCAAGTAGTCTCTCTATTAGTAACAG | 57.884 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
4203 | 4869 | 2.889045 | ACAGTGCTAGGTTTCGTCAGTA | 59.111 | 45.455 | 0.00 | 0.00 | 0.00 | 2.74 |
4205 | 4871 | 2.492484 | AGTGCTAGGTTTCGTCAGTAGG | 59.508 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
4206 | 4872 | 1.822990 | TGCTAGGTTTCGTCAGTAGGG | 59.177 | 52.381 | 0.00 | 0.00 | 0.00 | 3.53 |
4208 | 4874 | 2.099427 | GCTAGGTTTCGTCAGTAGGGAG | 59.901 | 54.545 | 0.00 | 0.00 | 0.00 | 4.30 |
4209 | 4875 | 2.305858 | AGGTTTCGTCAGTAGGGAGT | 57.694 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4210 | 4876 | 2.169330 | AGGTTTCGTCAGTAGGGAGTC | 58.831 | 52.381 | 0.00 | 0.00 | 0.00 | 3.36 |
4211 | 4877 | 1.891150 | GGTTTCGTCAGTAGGGAGTCA | 59.109 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
4212 | 4878 | 2.496470 | GGTTTCGTCAGTAGGGAGTCAT | 59.504 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
4213 | 4879 | 3.698040 | GGTTTCGTCAGTAGGGAGTCATA | 59.302 | 47.826 | 0.00 | 0.00 | 0.00 | 2.15 |
4214 | 4880 | 4.341520 | GGTTTCGTCAGTAGGGAGTCATAT | 59.658 | 45.833 | 0.00 | 0.00 | 0.00 | 1.78 |
4215 | 4881 | 5.533903 | GGTTTCGTCAGTAGGGAGTCATATA | 59.466 | 44.000 | 0.00 | 0.00 | 0.00 | 0.86 |
4216 | 4882 | 6.437094 | GTTTCGTCAGTAGGGAGTCATATAC | 58.563 | 44.000 | 0.00 | 0.00 | 0.00 | 1.47 |
4239 | 4905 | 2.143122 | TGACTCATGTTCGTTCAAGGC | 58.857 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
4242 | 4908 | 2.549754 | ACTCATGTTCGTTCAAGGCTTG | 59.450 | 45.455 | 21.17 | 21.17 | 0.00 | 4.01 |
4244 | 4910 | 3.734463 | TCATGTTCGTTCAAGGCTTGTA | 58.266 | 40.909 | 25.39 | 14.74 | 0.00 | 2.41 |
4245 | 4911 | 4.323417 | TCATGTTCGTTCAAGGCTTGTAT | 58.677 | 39.130 | 25.39 | 8.23 | 0.00 | 2.29 |
4246 | 4912 | 4.154015 | TCATGTTCGTTCAAGGCTTGTATG | 59.846 | 41.667 | 25.39 | 21.00 | 0.00 | 2.39 |
4247 | 4913 | 2.225491 | TGTTCGTTCAAGGCTTGTATGC | 59.775 | 45.455 | 25.39 | 10.96 | 0.00 | 3.14 |
4248 | 4914 | 2.472695 | TCGTTCAAGGCTTGTATGCT | 57.527 | 45.000 | 25.39 | 0.00 | 0.00 | 3.79 |
4249 | 4915 | 3.603158 | TCGTTCAAGGCTTGTATGCTA | 57.397 | 42.857 | 25.39 | 3.49 | 0.00 | 3.49 |
4250 | 4916 | 3.259064 | TCGTTCAAGGCTTGTATGCTAC | 58.741 | 45.455 | 25.39 | 13.71 | 0.00 | 3.58 |
4251 | 4917 | 3.056107 | TCGTTCAAGGCTTGTATGCTACT | 60.056 | 43.478 | 25.39 | 0.00 | 0.00 | 2.57 |
4252 | 4918 | 3.307242 | CGTTCAAGGCTTGTATGCTACTC | 59.693 | 47.826 | 25.39 | 3.11 | 0.00 | 2.59 |
4253 | 4919 | 4.508662 | GTTCAAGGCTTGTATGCTACTCT | 58.491 | 43.478 | 25.39 | 0.00 | 0.00 | 3.24 |
4254 | 4920 | 5.661458 | GTTCAAGGCTTGTATGCTACTCTA | 58.339 | 41.667 | 25.39 | 0.00 | 0.00 | 2.43 |
4255 | 4921 | 6.284459 | GTTCAAGGCTTGTATGCTACTCTAT | 58.716 | 40.000 | 25.39 | 0.00 | 0.00 | 1.98 |
4256 | 4922 | 6.485830 | TCAAGGCTTGTATGCTACTCTATT | 57.514 | 37.500 | 25.39 | 0.00 | 0.00 | 1.73 |
4257 | 4923 | 7.597288 | TCAAGGCTTGTATGCTACTCTATTA | 57.403 | 36.000 | 25.39 | 0.00 | 0.00 | 0.98 |
4258 | 4924 | 7.661968 | TCAAGGCTTGTATGCTACTCTATTAG | 58.338 | 38.462 | 25.39 | 0.00 | 0.00 | 1.73 |
4259 | 4925 | 7.287927 | TCAAGGCTTGTATGCTACTCTATTAGT | 59.712 | 37.037 | 25.39 | 0.00 | 42.62 | 2.24 |
4260 | 4926 | 8.577296 | CAAGGCTTGTATGCTACTCTATTAGTA | 58.423 | 37.037 | 19.07 | 0.00 | 39.80 | 1.82 |
4261 | 4927 | 8.707796 | AGGCTTGTATGCTACTCTATTAGTAA | 57.292 | 34.615 | 0.00 | 0.00 | 40.21 | 2.24 |
4262 | 4928 | 8.578151 | AGGCTTGTATGCTACTCTATTAGTAAC | 58.422 | 37.037 | 0.00 | 0.00 | 40.21 | 2.50 |
4263 | 4929 | 7.537991 | GGCTTGTATGCTACTCTATTAGTAACG | 59.462 | 40.741 | 0.00 | 0.00 | 40.21 | 3.18 |
4264 | 4930 | 7.537991 | GCTTGTATGCTACTCTATTAGTAACGG | 59.462 | 40.741 | 0.00 | 0.00 | 40.21 | 4.44 |
4265 | 4931 | 8.681486 | TTGTATGCTACTCTATTAGTAACGGA | 57.319 | 34.615 | 0.00 | 0.00 | 40.21 | 4.69 |
4266 | 4932 | 8.320396 | TGTATGCTACTCTATTAGTAACGGAG | 57.680 | 38.462 | 10.58 | 10.58 | 40.21 | 4.63 |
4267 | 4933 | 7.935755 | TGTATGCTACTCTATTAGTAACGGAGT | 59.064 | 37.037 | 17.86 | 17.86 | 40.21 | 3.85 |
4268 | 4934 | 9.429359 | GTATGCTACTCTATTAGTAACGGAGTA | 57.571 | 37.037 | 18.08 | 18.08 | 40.21 | 2.59 |
4270 | 4936 | 8.915057 | TGCTACTCTATTAGTAACGGAGTATT | 57.085 | 34.615 | 18.84 | 4.96 | 40.21 | 1.89 |
4275 | 4941 | 9.859152 | ACTCTATTAGTAACGGAGTATTAGGTT | 57.141 | 33.333 | 14.30 | 0.00 | 45.00 | 3.50 |
4280 | 4946 | 8.995027 | TTAGTAACGGAGTATTAGGTTATGGA | 57.005 | 34.615 | 0.00 | 0.00 | 45.00 | 3.41 |
4281 | 4947 | 7.902920 | AGTAACGGAGTATTAGGTTATGGAA | 57.097 | 36.000 | 0.00 | 0.00 | 45.00 | 3.53 |
4282 | 4948 | 8.488308 | AGTAACGGAGTATTAGGTTATGGAAT | 57.512 | 34.615 | 0.00 | 0.00 | 45.00 | 3.01 |
4283 | 4949 | 8.583296 | AGTAACGGAGTATTAGGTTATGGAATC | 58.417 | 37.037 | 0.00 | 0.00 | 45.00 | 2.52 |
4284 | 4950 | 6.022163 | ACGGAGTATTAGGTTATGGAATCG | 57.978 | 41.667 | 0.00 | 0.00 | 41.94 | 3.34 |
4285 | 4951 | 5.047519 | ACGGAGTATTAGGTTATGGAATCGG | 60.048 | 44.000 | 0.00 | 0.00 | 41.94 | 4.18 |
4286 | 4952 | 5.047519 | CGGAGTATTAGGTTATGGAATCGGT | 60.048 | 44.000 | 0.00 | 0.00 | 0.00 | 4.69 |
4287 | 4953 | 6.164176 | GGAGTATTAGGTTATGGAATCGGTG | 58.836 | 44.000 | 0.00 | 0.00 | 0.00 | 4.94 |
4288 | 4954 | 6.110411 | AGTATTAGGTTATGGAATCGGTGG | 57.890 | 41.667 | 0.00 | 0.00 | 0.00 | 4.61 |
4289 | 4955 | 5.605488 | AGTATTAGGTTATGGAATCGGTGGT | 59.395 | 40.000 | 0.00 | 0.00 | 0.00 | 4.16 |
4290 | 4956 | 2.710096 | AGGTTATGGAATCGGTGGTG | 57.290 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
4291 | 4957 | 1.021968 | GGTTATGGAATCGGTGGTGC | 58.978 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 |
4292 | 4958 | 1.408266 | GGTTATGGAATCGGTGGTGCT | 60.408 | 52.381 | 0.00 | 0.00 | 0.00 | 4.40 |
4293 | 4959 | 2.158871 | GGTTATGGAATCGGTGGTGCTA | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 3.49 |
4294 | 4960 | 3.131396 | GTTATGGAATCGGTGGTGCTAG | 58.869 | 50.000 | 0.00 | 0.00 | 0.00 | 3.42 |
4295 | 4961 | 1.204146 | ATGGAATCGGTGGTGCTAGT | 58.796 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
4296 | 4962 | 0.249120 | TGGAATCGGTGGTGCTAGTG | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
4297 | 4963 | 0.249398 | GGAATCGGTGGTGCTAGTGT | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 3.55 |
4298 | 4964 | 1.359848 | GAATCGGTGGTGCTAGTGTG | 58.640 | 55.000 | 0.00 | 0.00 | 0.00 | 3.82 |
4299 | 4965 | 0.036388 | AATCGGTGGTGCTAGTGTGG | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
4300 | 4966 | 2.521958 | ATCGGTGGTGCTAGTGTGGC | 62.522 | 60.000 | 0.00 | 0.00 | 0.00 | 5.01 |
4301 | 4967 | 2.750350 | GGTGGTGCTAGTGTGGCT | 59.250 | 61.111 | 0.00 | 0.00 | 0.00 | 4.75 |
4302 | 4968 | 1.073199 | GGTGGTGCTAGTGTGGCTT | 59.927 | 57.895 | 0.00 | 0.00 | 0.00 | 4.35 |
4303 | 4969 | 1.237285 | GGTGGTGCTAGTGTGGCTTG | 61.237 | 60.000 | 0.00 | 0.00 | 0.00 | 4.01 |
4304 | 4970 | 0.535102 | GTGGTGCTAGTGTGGCTTGT | 60.535 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4305 | 4971 | 0.182537 | TGGTGCTAGTGTGGCTTGTT | 59.817 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
4306 | 4972 | 1.318576 | GGTGCTAGTGTGGCTTGTTT | 58.681 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
4307 | 4973 | 1.001378 | GGTGCTAGTGTGGCTTGTTTG | 60.001 | 52.381 | 0.00 | 0.00 | 0.00 | 2.93 |
4308 | 4974 | 0.667993 | TGCTAGTGTGGCTTGTTTGC | 59.332 | 50.000 | 0.00 | 0.00 | 0.00 | 3.68 |
4309 | 4975 | 0.385974 | GCTAGTGTGGCTTGTTTGCG | 60.386 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
4310 | 4976 | 1.225855 | CTAGTGTGGCTTGTTTGCGA | 58.774 | 50.000 | 0.00 | 0.00 | 0.00 | 5.10 |
4311 | 4977 | 0.941542 | TAGTGTGGCTTGTTTGCGAC | 59.058 | 50.000 | 0.00 | 0.00 | 41.10 | 5.19 |
4312 | 4978 | 0.748005 | AGTGTGGCTTGTTTGCGACT | 60.748 | 50.000 | 0.00 | 0.00 | 41.25 | 4.18 |
4313 | 4979 | 0.100503 | GTGTGGCTTGTTTGCGACTT | 59.899 | 50.000 | 0.00 | 0.00 | 41.25 | 3.01 |
4314 | 4980 | 1.332375 | GTGTGGCTTGTTTGCGACTTA | 59.668 | 47.619 | 0.00 | 0.00 | 41.25 | 2.24 |
4315 | 4981 | 2.017782 | TGTGGCTTGTTTGCGACTTAA | 58.982 | 42.857 | 0.00 | 0.00 | 41.25 | 1.85 |
4316 | 4982 | 2.621055 | TGTGGCTTGTTTGCGACTTAAT | 59.379 | 40.909 | 0.00 | 0.00 | 41.25 | 1.40 |
4317 | 4983 | 3.067461 | TGTGGCTTGTTTGCGACTTAATT | 59.933 | 39.130 | 0.00 | 0.00 | 41.25 | 1.40 |
4318 | 4984 | 4.048504 | GTGGCTTGTTTGCGACTTAATTT | 58.951 | 39.130 | 0.00 | 0.00 | 38.38 | 1.82 |
4319 | 4985 | 4.148174 | GTGGCTTGTTTGCGACTTAATTTC | 59.852 | 41.667 | 0.00 | 0.00 | 38.38 | 2.17 |
4320 | 4986 | 3.673338 | GGCTTGTTTGCGACTTAATTTCC | 59.327 | 43.478 | 0.00 | 0.00 | 0.00 | 3.13 |
4321 | 4987 | 3.360758 | GCTTGTTTGCGACTTAATTTCCG | 59.639 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
4322 | 4988 | 3.546002 | TGTTTGCGACTTAATTTCCGG | 57.454 | 42.857 | 0.00 | 0.00 | 0.00 | 5.14 |
4323 | 4989 | 2.879646 | TGTTTGCGACTTAATTTCCGGT | 59.120 | 40.909 | 0.00 | 0.00 | 0.00 | 5.28 |
4324 | 4990 | 3.231160 | GTTTGCGACTTAATTTCCGGTG | 58.769 | 45.455 | 0.00 | 0.00 | 0.00 | 4.94 |
4325 | 4991 | 1.444836 | TGCGACTTAATTTCCGGTGG | 58.555 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
4326 | 4992 | 0.730840 | GCGACTTAATTTCCGGTGGG | 59.269 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
4327 | 4993 | 1.676615 | GCGACTTAATTTCCGGTGGGA | 60.677 | 52.381 | 0.00 | 0.00 | 41.83 | 4.37 |
4328 | 4994 | 2.277084 | CGACTTAATTTCCGGTGGGAG | 58.723 | 52.381 | 0.00 | 0.00 | 44.98 | 4.30 |
4329 | 4995 | 2.014857 | GACTTAATTTCCGGTGGGAGC | 58.985 | 52.381 | 0.00 | 0.00 | 44.98 | 4.70 |
4330 | 4996 | 1.633945 | ACTTAATTTCCGGTGGGAGCT | 59.366 | 47.619 | 0.00 | 0.00 | 44.98 | 4.09 |
4331 | 4997 | 2.017049 | CTTAATTTCCGGTGGGAGCTG | 58.983 | 52.381 | 0.00 | 0.00 | 44.98 | 4.24 |
4332 | 4998 | 0.393808 | TAATTTCCGGTGGGAGCTGC | 60.394 | 55.000 | 0.00 | 0.00 | 44.98 | 5.25 |
4333 | 4999 | 2.424842 | AATTTCCGGTGGGAGCTGCA | 62.425 | 55.000 | 7.79 | 0.00 | 44.98 | 4.41 |
4334 | 5000 | 2.215451 | ATTTCCGGTGGGAGCTGCAT | 62.215 | 55.000 | 7.79 | 0.00 | 44.98 | 3.96 |
4335 | 5001 | 2.424842 | TTTCCGGTGGGAGCTGCATT | 62.425 | 55.000 | 7.79 | 0.00 | 44.98 | 3.56 |
4336 | 5002 | 2.361610 | CCGGTGGGAGCTGCATTT | 60.362 | 61.111 | 7.79 | 0.00 | 34.06 | 2.32 |
4337 | 5003 | 2.703798 | CCGGTGGGAGCTGCATTTG | 61.704 | 63.158 | 7.79 | 0.00 | 34.06 | 2.32 |
4338 | 5004 | 1.973281 | CGGTGGGAGCTGCATTTGT | 60.973 | 57.895 | 7.79 | 0.00 | 0.00 | 2.83 |
4339 | 5005 | 0.676466 | CGGTGGGAGCTGCATTTGTA | 60.676 | 55.000 | 7.79 | 0.00 | 0.00 | 2.41 |
4340 | 5006 | 0.811281 | GGTGGGAGCTGCATTTGTAC | 59.189 | 55.000 | 7.79 | 0.00 | 0.00 | 2.90 |
4341 | 5007 | 1.614317 | GGTGGGAGCTGCATTTGTACT | 60.614 | 52.381 | 7.79 | 0.00 | 0.00 | 2.73 |
4342 | 5008 | 1.740025 | GTGGGAGCTGCATTTGTACTC | 59.260 | 52.381 | 7.79 | 0.00 | 0.00 | 2.59 |
4343 | 5009 | 1.340017 | TGGGAGCTGCATTTGTACTCC | 60.340 | 52.381 | 7.79 | 0.00 | 45.10 | 3.85 |
4344 | 5010 | 1.383523 | GGAGCTGCATTTGTACTCCC | 58.616 | 55.000 | 0.00 | 0.00 | 40.91 | 4.30 |
4345 | 5011 | 1.065126 | GGAGCTGCATTTGTACTCCCT | 60.065 | 52.381 | 0.00 | 0.00 | 40.91 | 4.20 |
4346 | 5012 | 2.284190 | GAGCTGCATTTGTACTCCCTC | 58.716 | 52.381 | 1.02 | 0.00 | 0.00 | 4.30 |
4347 | 5013 | 1.912043 | AGCTGCATTTGTACTCCCTCT | 59.088 | 47.619 | 1.02 | 0.00 | 0.00 | 3.69 |
4348 | 5014 | 2.012673 | GCTGCATTTGTACTCCCTCTG | 58.987 | 52.381 | 0.00 | 0.00 | 0.00 | 3.35 |
4349 | 5015 | 2.012673 | CTGCATTTGTACTCCCTCTGC | 58.987 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
4350 | 5016 | 1.340017 | TGCATTTGTACTCCCTCTGCC | 60.340 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
4351 | 5017 | 2.019156 | GCATTTGTACTCCCTCTGCCC | 61.019 | 57.143 | 0.00 | 0.00 | 0.00 | 5.36 |
4352 | 5018 | 0.919710 | ATTTGTACTCCCTCTGCCCC | 59.080 | 55.000 | 0.00 | 0.00 | 0.00 | 5.80 |
4353 | 5019 | 0.474854 | TTTGTACTCCCTCTGCCCCA | 60.475 | 55.000 | 0.00 | 0.00 | 0.00 | 4.96 |
4354 | 5020 | 0.253160 | TTGTACTCCCTCTGCCCCAT | 60.253 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
4355 | 5021 | 0.639943 | TGTACTCCCTCTGCCCCATA | 59.360 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
4356 | 5022 | 1.009060 | TGTACTCCCTCTGCCCCATAA | 59.991 | 52.381 | 0.00 | 0.00 | 0.00 | 1.90 |
4357 | 5023 | 2.339769 | GTACTCCCTCTGCCCCATAAT | 58.660 | 52.381 | 0.00 | 0.00 | 0.00 | 1.28 |
4358 | 5024 | 2.815357 | ACTCCCTCTGCCCCATAATA | 57.185 | 50.000 | 0.00 | 0.00 | 0.00 | 0.98 |
4359 | 5025 | 3.074857 | ACTCCCTCTGCCCCATAATAA | 57.925 | 47.619 | 0.00 | 0.00 | 0.00 | 1.40 |
4360 | 5026 | 2.711547 | ACTCCCTCTGCCCCATAATAAC | 59.288 | 50.000 | 0.00 | 0.00 | 0.00 | 1.89 |
4361 | 5027 | 2.040412 | CTCCCTCTGCCCCATAATAACC | 59.960 | 54.545 | 0.00 | 0.00 | 0.00 | 2.85 |
4362 | 5028 | 1.780309 | CCCTCTGCCCCATAATAACCA | 59.220 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
4363 | 5029 | 2.379907 | CCCTCTGCCCCATAATAACCAT | 59.620 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
4364 | 5030 | 3.591527 | CCCTCTGCCCCATAATAACCATA | 59.408 | 47.826 | 0.00 | 0.00 | 0.00 | 2.74 |
4365 | 5031 | 4.044065 | CCCTCTGCCCCATAATAACCATAA | 59.956 | 45.833 | 0.00 | 0.00 | 0.00 | 1.90 |
4366 | 5032 | 5.281716 | CCCTCTGCCCCATAATAACCATAAT | 60.282 | 44.000 | 0.00 | 0.00 | 0.00 | 1.28 |
4367 | 5033 | 6.069088 | CCCTCTGCCCCATAATAACCATAATA | 60.069 | 42.308 | 0.00 | 0.00 | 0.00 | 0.98 |
4368 | 5034 | 7.367733 | CCCTCTGCCCCATAATAACCATAATAT | 60.368 | 40.741 | 0.00 | 0.00 | 0.00 | 1.28 |
4369 | 5035 | 8.723365 | CCTCTGCCCCATAATAACCATAATATA | 58.277 | 37.037 | 0.00 | 0.00 | 0.00 | 0.86 |
4404 | 5070 | 9.453325 | TTTTAAGTTACCATAGCTTGAAAAACG | 57.547 | 29.630 | 0.00 | 0.00 | 33.75 | 3.60 |
4405 | 5071 | 6.628919 | AAGTTACCATAGCTTGAAAAACGT | 57.371 | 33.333 | 0.00 | 0.00 | 0.00 | 3.99 |
4406 | 5072 | 6.628919 | AGTTACCATAGCTTGAAAAACGTT | 57.371 | 33.333 | 0.00 | 0.00 | 0.00 | 3.99 |
4407 | 5073 | 6.665465 | AGTTACCATAGCTTGAAAAACGTTC | 58.335 | 36.000 | 0.00 | 0.00 | 0.00 | 3.95 |
4408 | 5074 | 6.485648 | AGTTACCATAGCTTGAAAAACGTTCT | 59.514 | 34.615 | 0.00 | 0.00 | 0.00 | 3.01 |
4409 | 5075 | 5.767816 | ACCATAGCTTGAAAAACGTTCTT | 57.232 | 34.783 | 0.00 | 0.00 | 0.00 | 2.52 |
4410 | 5076 | 6.144078 | ACCATAGCTTGAAAAACGTTCTTT | 57.856 | 33.333 | 0.00 | 4.72 | 0.00 | 2.52 |
4411 | 5077 | 7.266922 | ACCATAGCTTGAAAAACGTTCTTTA | 57.733 | 32.000 | 0.00 | 0.00 | 0.00 | 1.85 |
4412 | 5078 | 7.882179 | ACCATAGCTTGAAAAACGTTCTTTAT | 58.118 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
4413 | 5079 | 9.005777 | ACCATAGCTTGAAAAACGTTCTTTATA | 57.994 | 29.630 | 0.00 | 0.00 | 0.00 | 0.98 |
4429 | 5095 | 8.897872 | GTTCTTTATATTATGGAACGGAAGGA | 57.102 | 34.615 | 0.00 | 0.00 | 0.00 | 3.36 |
4430 | 5096 | 8.989980 | GTTCTTTATATTATGGAACGGAAGGAG | 58.010 | 37.037 | 0.00 | 0.00 | 0.00 | 3.69 |
4431 | 5097 | 8.258850 | TCTTTATATTATGGAACGGAAGGAGT | 57.741 | 34.615 | 0.00 | 0.00 | 0.00 | 3.85 |
4432 | 5098 | 9.370930 | TCTTTATATTATGGAACGGAAGGAGTA | 57.629 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
4433 | 5099 | 9.640963 | CTTTATATTATGGAACGGAAGGAGTAG | 57.359 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
4434 | 5100 | 4.957684 | ATTATGGAACGGAAGGAGTAGG | 57.042 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
4435 | 5101 | 2.249309 | ATGGAACGGAAGGAGTAGGT | 57.751 | 50.000 | 0.00 | 0.00 | 0.00 | 3.08 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
13 | 14 | 1.747745 | CGGTTCATTTCGGGGGTCC | 60.748 | 63.158 | 0.00 | 0.00 | 0.00 | 4.46 |
23 | 24 | 3.055719 | CTGGCCACGCGGTTCATT | 61.056 | 61.111 | 12.47 | 0.00 | 33.28 | 2.57 |
290 | 302 | 2.183555 | CGGGACCGGTAGCAGTTC | 59.816 | 66.667 | 7.34 | 0.00 | 35.56 | 3.01 |
304 | 316 | 2.365095 | GACGAGGTAATCCAGCCGGG | 62.365 | 65.000 | 2.18 | 0.00 | 35.89 | 5.73 |
305 | 317 | 1.067582 | GACGAGGTAATCCAGCCGG | 59.932 | 63.158 | 0.00 | 0.00 | 35.89 | 6.13 |
306 | 318 | 1.067582 | GGACGAGGTAATCCAGCCG | 59.932 | 63.158 | 0.00 | 0.00 | 34.87 | 5.52 |
307 | 319 | 0.179081 | GTGGACGAGGTAATCCAGCC | 60.179 | 60.000 | 0.00 | 0.00 | 45.72 | 4.85 |
308 | 320 | 0.535335 | TGTGGACGAGGTAATCCAGC | 59.465 | 55.000 | 0.00 | 0.00 | 45.72 | 4.85 |
309 | 321 | 2.430694 | TGATGTGGACGAGGTAATCCAG | 59.569 | 50.000 | 0.00 | 0.00 | 45.72 | 3.86 |
310 | 322 | 2.462723 | TGATGTGGACGAGGTAATCCA | 58.537 | 47.619 | 0.00 | 0.00 | 42.88 | 3.41 |
311 | 323 | 3.195661 | GTTGATGTGGACGAGGTAATCC | 58.804 | 50.000 | 0.00 | 0.00 | 35.37 | 3.01 |
312 | 324 | 3.118738 | AGGTTGATGTGGACGAGGTAATC | 60.119 | 47.826 | 0.00 | 0.00 | 0.00 | 1.75 |
313 | 325 | 2.838202 | AGGTTGATGTGGACGAGGTAAT | 59.162 | 45.455 | 0.00 | 0.00 | 0.00 | 1.89 |
314 | 326 | 2.028476 | CAGGTTGATGTGGACGAGGTAA | 60.028 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
315 | 327 | 1.548719 | CAGGTTGATGTGGACGAGGTA | 59.451 | 52.381 | 0.00 | 0.00 | 0.00 | 3.08 |
316 | 328 | 0.321671 | CAGGTTGATGTGGACGAGGT | 59.678 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
317 | 329 | 1.021390 | GCAGGTTGATGTGGACGAGG | 61.021 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
318 | 330 | 0.320683 | TGCAGGTTGATGTGGACGAG | 60.321 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
319 | 331 | 0.602638 | GTGCAGGTTGATGTGGACGA | 60.603 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
320 | 332 | 0.884259 | TGTGCAGGTTGATGTGGACG | 60.884 | 55.000 | 0.00 | 0.00 | 37.80 | 4.79 |
321 | 333 | 0.877071 | CTGTGCAGGTTGATGTGGAC | 59.123 | 55.000 | 0.00 | 0.00 | 35.70 | 4.02 |
322 | 334 | 0.890542 | GCTGTGCAGGTTGATGTGGA | 60.891 | 55.000 | 1.11 | 0.00 | 0.00 | 4.02 |
323 | 335 | 0.892358 | AGCTGTGCAGGTTGATGTGG | 60.892 | 55.000 | 0.00 | 0.00 | 35.28 | 4.17 |
324 | 336 | 1.466167 | GTAGCTGTGCAGGTTGATGTG | 59.534 | 52.381 | 9.24 | 0.00 | 40.09 | 3.21 |
325 | 337 | 1.611673 | GGTAGCTGTGCAGGTTGATGT | 60.612 | 52.381 | 9.24 | 0.00 | 40.09 | 3.06 |
326 | 338 | 1.089920 | GGTAGCTGTGCAGGTTGATG | 58.910 | 55.000 | 9.24 | 0.00 | 40.09 | 3.07 |
327 | 339 | 0.035056 | GGGTAGCTGTGCAGGTTGAT | 60.035 | 55.000 | 9.24 | 0.00 | 40.09 | 2.57 |
328 | 340 | 1.374947 | GGGTAGCTGTGCAGGTTGA | 59.625 | 57.895 | 9.24 | 0.00 | 40.09 | 3.18 |
329 | 341 | 1.675641 | GGGGTAGCTGTGCAGGTTG | 60.676 | 63.158 | 9.24 | 0.00 | 40.09 | 3.77 |
330 | 342 | 2.129555 | CTGGGGTAGCTGTGCAGGTT | 62.130 | 60.000 | 9.24 | 0.00 | 40.09 | 3.50 |
331 | 343 | 2.529136 | TGGGGTAGCTGTGCAGGT | 60.529 | 61.111 | 8.95 | 8.95 | 42.47 | 4.00 |
332 | 344 | 2.270205 | CTGGGGTAGCTGTGCAGG | 59.730 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
333 | 345 | 2.270205 | CCTGGGGTAGCTGTGCAG | 59.730 | 66.667 | 0.00 | 0.00 | 0.00 | 4.41 |
334 | 346 | 3.329889 | CCCTGGGGTAGCTGTGCA | 61.330 | 66.667 | 4.27 | 0.00 | 0.00 | 4.57 |
335 | 347 | 3.009115 | TCCCTGGGGTAGCTGTGC | 61.009 | 66.667 | 14.00 | 0.00 | 36.47 | 4.57 |
336 | 348 | 2.370445 | CCTCCCTGGGGTAGCTGTG | 61.370 | 68.421 | 14.00 | 0.00 | 36.47 | 3.66 |
337 | 349 | 2.041265 | CCTCCCTGGGGTAGCTGT | 59.959 | 66.667 | 14.00 | 0.00 | 36.47 | 4.40 |
338 | 350 | 1.764054 | CTCCTCCCTGGGGTAGCTG | 60.764 | 68.421 | 14.00 | 0.00 | 36.20 | 4.24 |
339 | 351 | 2.699496 | CTCCTCCCTGGGGTAGCT | 59.301 | 66.667 | 14.00 | 0.00 | 36.20 | 3.32 |
340 | 352 | 3.164977 | GCTCCTCCCTGGGGTAGC | 61.165 | 72.222 | 14.00 | 15.08 | 38.99 | 3.58 |
341 | 353 | 2.840102 | CGCTCCTCCCTGGGGTAG | 60.840 | 72.222 | 14.00 | 9.06 | 38.99 | 3.18 |
342 | 354 | 4.475444 | CCGCTCCTCCCTGGGGTA | 62.475 | 72.222 | 14.00 | 0.00 | 38.99 | 3.69 |
351 | 363 | 4.214327 | CTTCTCCGCCCGCTCCTC | 62.214 | 72.222 | 0.00 | 0.00 | 0.00 | 3.71 |
354 | 366 | 4.516195 | GTCCTTCTCCGCCCGCTC | 62.516 | 72.222 | 0.00 | 0.00 | 0.00 | 5.03 |
356 | 368 | 4.162690 | ATGTCCTTCTCCGCCCGC | 62.163 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
357 | 369 | 2.107141 | GATGTCCTTCTCCGCCCG | 59.893 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
358 | 370 | 2.317149 | CTGGATGTCCTTCTCCGCCC | 62.317 | 65.000 | 0.09 | 0.00 | 36.82 | 6.13 |
359 | 371 | 1.144936 | CTGGATGTCCTTCTCCGCC | 59.855 | 63.158 | 0.09 | 0.00 | 36.82 | 6.13 |
360 | 372 | 1.144936 | CCTGGATGTCCTTCTCCGC | 59.855 | 63.158 | 0.09 | 0.00 | 36.82 | 5.54 |
361 | 373 | 1.826024 | CCCTGGATGTCCTTCTCCG | 59.174 | 63.158 | 0.00 | 0.00 | 36.82 | 4.63 |
362 | 374 | 1.529309 | GCCCTGGATGTCCTTCTCC | 59.471 | 63.158 | 0.00 | 0.00 | 36.82 | 3.71 |
363 | 375 | 1.529309 | GGCCCTGGATGTCCTTCTC | 59.471 | 63.158 | 0.00 | 0.00 | 36.82 | 2.87 |
364 | 376 | 2.370445 | CGGCCCTGGATGTCCTTCT | 61.370 | 63.158 | 0.00 | 0.00 | 36.82 | 2.85 |
365 | 377 | 2.190578 | CGGCCCTGGATGTCCTTC | 59.809 | 66.667 | 0.00 | 0.00 | 36.82 | 3.46 |
366 | 378 | 3.411517 | CCGGCCCTGGATGTCCTT | 61.412 | 66.667 | 0.00 | 0.00 | 36.82 | 3.36 |
369 | 381 | 3.645268 | AAAGCCGGCCCTGGATGTC | 62.645 | 63.158 | 26.15 | 0.00 | 0.00 | 3.06 |
370 | 382 | 3.661648 | AAAGCCGGCCCTGGATGT | 61.662 | 61.111 | 26.15 | 0.00 | 0.00 | 3.06 |
371 | 383 | 3.142838 | CAAAGCCGGCCCTGGATG | 61.143 | 66.667 | 26.15 | 9.58 | 0.00 | 3.51 |
372 | 384 | 4.447342 | CCAAAGCCGGCCCTGGAT | 62.447 | 66.667 | 31.65 | 8.22 | 0.00 | 3.41 |
567 | 582 | 2.906897 | CGTGTTGCCTGGGCTTGT | 60.907 | 61.111 | 13.05 | 0.00 | 42.51 | 3.16 |
585 | 602 | 4.379243 | AGGCGAACGACAGGGCAG | 62.379 | 66.667 | 2.25 | 0.00 | 0.00 | 4.85 |
819 | 854 | 6.537355 | TGAGAAGTTTCAGAATTGAGACCAT | 58.463 | 36.000 | 0.00 | 0.00 | 38.78 | 3.55 |
1017 | 1052 | 2.076100 | TCTGAATTTGTAGCAGCACCG | 58.924 | 47.619 | 0.00 | 0.00 | 0.00 | 4.94 |
1321 | 1356 | 7.592885 | AGTAATCATATGAAAAATGCCTGCT | 57.407 | 32.000 | 9.99 | 0.00 | 0.00 | 4.24 |
3062 | 3719 | 5.105023 | ACATCTGCTGACTTATCATGAGTGT | 60.105 | 40.000 | 0.09 | 0.00 | 33.22 | 3.55 |
3071 | 3728 | 6.000840 | TCTAGATCGACATCTGCTGACTTAT | 58.999 | 40.000 | 0.00 | 0.00 | 39.90 | 1.73 |
3437 | 4099 | 4.510167 | AATAGCATGCTAACCTCCAGTT | 57.490 | 40.909 | 30.06 | 14.83 | 42.83 | 3.16 |
3593 | 4255 | 8.695456 | GCCCAATAGAGAGAAAAATCCAATTTA | 58.305 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
3671 | 4333 | 0.734889 | CCATGTTGAAGCCGATGTCC | 59.265 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3672 | 4334 | 0.099436 | GCCATGTTGAAGCCGATGTC | 59.901 | 55.000 | 0.00 | 0.00 | 0.00 | 3.06 |
3673 | 4335 | 1.315257 | GGCCATGTTGAAGCCGATGT | 61.315 | 55.000 | 0.00 | 0.00 | 36.84 | 3.06 |
3674 | 4336 | 1.434696 | GGCCATGTTGAAGCCGATG | 59.565 | 57.895 | 0.00 | 0.00 | 36.84 | 3.84 |
3675 | 4337 | 3.924507 | GGCCATGTTGAAGCCGAT | 58.075 | 55.556 | 0.00 | 0.00 | 36.84 | 4.18 |
3679 | 4341 | 0.179119 | GATGCTGGCCATGTTGAAGC | 60.179 | 55.000 | 5.51 | 4.60 | 33.29 | 3.86 |
3680 | 4342 | 0.099968 | CGATGCTGGCCATGTTGAAG | 59.900 | 55.000 | 5.51 | 0.00 | 33.29 | 3.02 |
3681 | 4343 | 1.314534 | CCGATGCTGGCCATGTTGAA | 61.315 | 55.000 | 5.51 | 0.00 | 33.29 | 2.69 |
3682 | 4344 | 1.750018 | CCGATGCTGGCCATGTTGA | 60.750 | 57.895 | 5.51 | 0.00 | 33.29 | 3.18 |
3775 | 4437 | 3.564027 | CGATTTCGCGAGGGTGCC | 61.564 | 66.667 | 9.59 | 0.00 | 0.00 | 5.01 |
3870 | 4532 | 0.179111 | TTGACGATCTCGATGGGCAC | 60.179 | 55.000 | 6.60 | 0.00 | 43.02 | 5.01 |
3991 | 4653 | 3.696045 | TGACCCAGACCACAATTATTGG | 58.304 | 45.455 | 9.88 | 4.08 | 40.32 | 3.16 |
3992 | 4654 | 4.440525 | GCATGACCCAGACCACAATTATTG | 60.441 | 45.833 | 3.07 | 3.07 | 0.00 | 1.90 |
3993 | 4655 | 3.701040 | GCATGACCCAGACCACAATTATT | 59.299 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
3994 | 4656 | 3.290710 | GCATGACCCAGACCACAATTAT | 58.709 | 45.455 | 0.00 | 0.00 | 0.00 | 1.28 |
3995 | 4657 | 2.040947 | TGCATGACCCAGACCACAATTA | 59.959 | 45.455 | 0.00 | 0.00 | 0.00 | 1.40 |
3996 | 4658 | 1.203038 | TGCATGACCCAGACCACAATT | 60.203 | 47.619 | 0.00 | 0.00 | 0.00 | 2.32 |
3997 | 4659 | 0.405198 | TGCATGACCCAGACCACAAT | 59.595 | 50.000 | 0.00 | 0.00 | 0.00 | 2.71 |
3998 | 4660 | 0.250858 | CTGCATGACCCAGACCACAA | 60.251 | 55.000 | 0.00 | 0.00 | 32.03 | 3.33 |
3999 | 4661 | 1.376086 | CTGCATGACCCAGACCACA | 59.624 | 57.895 | 0.00 | 0.00 | 32.03 | 4.17 |
4000 | 4662 | 2.042831 | GCTGCATGACCCAGACCAC | 61.043 | 63.158 | 0.00 | 0.00 | 32.03 | 4.16 |
4001 | 4663 | 0.909133 | TAGCTGCATGACCCAGACCA | 60.909 | 55.000 | 1.02 | 0.00 | 32.03 | 4.02 |
4002 | 4664 | 0.253044 | TTAGCTGCATGACCCAGACC | 59.747 | 55.000 | 1.02 | 0.00 | 32.03 | 3.85 |
4003 | 4665 | 1.373570 | GTTAGCTGCATGACCCAGAC | 58.626 | 55.000 | 1.02 | 0.00 | 32.03 | 3.51 |
4004 | 4666 | 0.253044 | GGTTAGCTGCATGACCCAGA | 59.747 | 55.000 | 1.02 | 0.00 | 32.03 | 3.86 |
4005 | 4667 | 0.035152 | TGGTTAGCTGCATGACCCAG | 60.035 | 55.000 | 13.92 | 0.00 | 0.00 | 4.45 |
4006 | 4668 | 0.403655 | TTGGTTAGCTGCATGACCCA | 59.596 | 50.000 | 13.92 | 4.97 | 0.00 | 4.51 |
4007 | 4669 | 1.767759 | ATTGGTTAGCTGCATGACCC | 58.232 | 50.000 | 13.92 | 2.74 | 0.00 | 4.46 |
4008 | 4670 | 4.319766 | CGATTATTGGTTAGCTGCATGACC | 60.320 | 45.833 | 1.02 | 7.26 | 0.00 | 4.02 |
4009 | 4671 | 4.273480 | ACGATTATTGGTTAGCTGCATGAC | 59.727 | 41.667 | 1.02 | 0.00 | 0.00 | 3.06 |
4010 | 4672 | 4.273235 | CACGATTATTGGTTAGCTGCATGA | 59.727 | 41.667 | 1.02 | 0.00 | 0.00 | 3.07 |
4011 | 4673 | 4.530388 | CACGATTATTGGTTAGCTGCATG | 58.470 | 43.478 | 1.02 | 0.00 | 0.00 | 4.06 |
4012 | 4674 | 3.565482 | CCACGATTATTGGTTAGCTGCAT | 59.435 | 43.478 | 1.02 | 0.00 | 0.00 | 3.96 |
4013 | 4675 | 2.942376 | CCACGATTATTGGTTAGCTGCA | 59.058 | 45.455 | 1.02 | 0.00 | 0.00 | 4.41 |
4014 | 4676 | 2.943033 | ACCACGATTATTGGTTAGCTGC | 59.057 | 45.455 | 0.00 | 0.00 | 45.62 | 5.25 |
4023 | 4685 | 2.170607 | AGGACCCAGACCACGATTATTG | 59.829 | 50.000 | 0.00 | 0.00 | 0.00 | 1.90 |
4031 | 4693 | 4.083862 | GCCGAGGACCCAGACCAC | 62.084 | 72.222 | 0.00 | 0.00 | 0.00 | 4.16 |
4041 | 4703 | 1.186917 | TAACCAAAGGTCGCCGAGGA | 61.187 | 55.000 | 0.00 | 0.00 | 33.12 | 3.71 |
4042 | 4704 | 0.739813 | CTAACCAAAGGTCGCCGAGG | 60.740 | 60.000 | 0.00 | 0.00 | 33.12 | 4.63 |
4043 | 4705 | 0.245539 | TCTAACCAAAGGTCGCCGAG | 59.754 | 55.000 | 0.00 | 0.00 | 33.12 | 4.63 |
4044 | 4706 | 0.245539 | CTCTAACCAAAGGTCGCCGA | 59.754 | 55.000 | 0.00 | 0.00 | 33.12 | 5.54 |
4045 | 4707 | 1.359459 | GCTCTAACCAAAGGTCGCCG | 61.359 | 60.000 | 0.00 | 0.00 | 33.12 | 6.46 |
4046 | 4708 | 0.036294 | AGCTCTAACCAAAGGTCGCC | 60.036 | 55.000 | 0.00 | 0.00 | 33.12 | 5.54 |
4047 | 4709 | 1.079503 | CAGCTCTAACCAAAGGTCGC | 58.920 | 55.000 | 0.00 | 0.00 | 33.12 | 5.19 |
4048 | 4710 | 1.079503 | GCAGCTCTAACCAAAGGTCG | 58.920 | 55.000 | 0.00 | 0.00 | 33.12 | 4.79 |
4049 | 4711 | 2.481289 | AGCAGCTCTAACCAAAGGTC | 57.519 | 50.000 | 0.00 | 0.00 | 33.12 | 3.85 |
4050 | 4712 | 2.959465 | AAGCAGCTCTAACCAAAGGT | 57.041 | 45.000 | 0.00 | 0.00 | 37.65 | 3.50 |
4094 | 4759 | 4.818546 | GGTATGGTCTGTGATCCATGAAAG | 59.181 | 45.833 | 6.91 | 0.00 | 43.28 | 2.62 |
4095 | 4760 | 4.227073 | TGGTATGGTCTGTGATCCATGAAA | 59.773 | 41.667 | 6.91 | 0.00 | 43.28 | 2.69 |
4097 | 4762 | 3.383223 | TGGTATGGTCTGTGATCCATGA | 58.617 | 45.455 | 6.91 | 0.00 | 43.28 | 3.07 |
4114 | 4779 | 9.553064 | GAGTAGTACTACATAACTAAGCTGGTA | 57.447 | 37.037 | 29.87 | 0.00 | 38.48 | 3.25 |
4115 | 4780 | 7.501892 | GGAGTAGTACTACATAACTAAGCTGGT | 59.498 | 40.741 | 29.87 | 8.32 | 38.48 | 4.00 |
4116 | 4781 | 7.307870 | CGGAGTAGTACTACATAACTAAGCTGG | 60.308 | 44.444 | 29.87 | 5.25 | 38.48 | 4.85 |
4117 | 4782 | 7.226325 | ACGGAGTAGTACTACATAACTAAGCTG | 59.774 | 40.741 | 29.87 | 15.55 | 41.94 | 4.24 |
4119 | 4784 | 7.489574 | ACGGAGTAGTACTACATAACTAAGC | 57.510 | 40.000 | 29.87 | 10.56 | 41.94 | 3.09 |
4136 | 4801 | 1.377594 | TCGCAGCCACTACGGAGTA | 60.378 | 57.895 | 0.00 | 0.00 | 45.11 | 2.59 |
4138 | 4803 | 2.202623 | GTCGCAGCCACTACGGAG | 60.203 | 66.667 | 0.00 | 0.00 | 36.56 | 4.63 |
4139 | 4804 | 4.111016 | CGTCGCAGCCACTACGGA | 62.111 | 66.667 | 0.00 | 0.00 | 36.56 | 4.69 |
4140 | 4805 | 4.111016 | TCGTCGCAGCCACTACGG | 62.111 | 66.667 | 0.00 | 0.00 | 36.08 | 4.02 |
4141 | 4806 | 2.874780 | GTCGTCGCAGCCACTACG | 60.875 | 66.667 | 0.00 | 0.00 | 36.71 | 3.51 |
4151 | 4816 | 0.109689 | AGACTACTTGCTGTCGTCGC | 60.110 | 55.000 | 8.52 | 0.00 | 43.52 | 5.19 |
4155 | 4820 | 5.493133 | AATAGAGAGACTACTTGCTGTCG | 57.507 | 43.478 | 0.00 | 0.00 | 38.16 | 4.35 |
4162 | 4827 | 8.895737 | GCACTGTTACTAATAGAGAGACTACTT | 58.104 | 37.037 | 0.00 | 0.00 | 33.62 | 2.24 |
4163 | 4828 | 8.269317 | AGCACTGTTACTAATAGAGAGACTACT | 58.731 | 37.037 | 0.00 | 0.00 | 33.62 | 2.57 |
4169 | 4834 | 7.811117 | ACCTAGCACTGTTACTAATAGAGAG | 57.189 | 40.000 | 0.00 | 0.00 | 0.00 | 3.20 |
4170 | 4835 | 8.591114 | AAACCTAGCACTGTTACTAATAGAGA | 57.409 | 34.615 | 0.00 | 0.00 | 0.00 | 3.10 |
4171 | 4836 | 7.644551 | CGAAACCTAGCACTGTTACTAATAGAG | 59.355 | 40.741 | 0.00 | 0.00 | 0.00 | 2.43 |
4177 | 4843 | 4.520111 | TGACGAAACCTAGCACTGTTACTA | 59.480 | 41.667 | 0.00 | 0.00 | 0.00 | 1.82 |
4178 | 4844 | 3.319972 | TGACGAAACCTAGCACTGTTACT | 59.680 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
4184 | 4850 | 2.492484 | CCTACTGACGAAACCTAGCACT | 59.508 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
4185 | 4851 | 2.416972 | CCCTACTGACGAAACCTAGCAC | 60.417 | 54.545 | 0.00 | 0.00 | 0.00 | 4.40 |
4208 | 4874 | 9.119329 | GAACGAACATGAGTCATAGTATATGAC | 57.881 | 37.037 | 18.07 | 18.07 | 46.41 | 3.06 |
4209 | 4875 | 8.846211 | TGAACGAACATGAGTCATAGTATATGA | 58.154 | 33.333 | 5.03 | 0.00 | 0.00 | 2.15 |
4210 | 4876 | 9.463443 | TTGAACGAACATGAGTCATAGTATATG | 57.537 | 33.333 | 5.03 | 0.00 | 0.00 | 1.78 |
4211 | 4877 | 9.684448 | CTTGAACGAACATGAGTCATAGTATAT | 57.316 | 33.333 | 5.03 | 0.00 | 0.00 | 0.86 |
4212 | 4878 | 8.135529 | CCTTGAACGAACATGAGTCATAGTATA | 58.864 | 37.037 | 5.03 | 0.00 | 0.00 | 1.47 |
4213 | 4879 | 6.980978 | CCTTGAACGAACATGAGTCATAGTAT | 59.019 | 38.462 | 5.03 | 0.00 | 0.00 | 2.12 |
4214 | 4880 | 6.330278 | CCTTGAACGAACATGAGTCATAGTA | 58.670 | 40.000 | 5.03 | 0.00 | 0.00 | 1.82 |
4215 | 4881 | 5.171476 | CCTTGAACGAACATGAGTCATAGT | 58.829 | 41.667 | 5.03 | 3.97 | 0.00 | 2.12 |
4216 | 4882 | 4.033358 | GCCTTGAACGAACATGAGTCATAG | 59.967 | 45.833 | 5.03 | 3.33 | 0.00 | 2.23 |
4239 | 4905 | 8.781196 | TCCGTTACTAATAGAGTAGCATACAAG | 58.219 | 37.037 | 0.00 | 0.00 | 46.26 | 3.16 |
4242 | 4908 | 8.321650 | ACTCCGTTACTAATAGAGTAGCATAC | 57.678 | 38.462 | 0.00 | 0.00 | 40.84 | 2.39 |
4244 | 4910 | 9.517868 | AATACTCCGTTACTAATAGAGTAGCAT | 57.482 | 33.333 | 12.72 | 4.29 | 41.82 | 3.79 |
4245 | 4911 | 8.915057 | AATACTCCGTTACTAATAGAGTAGCA | 57.085 | 34.615 | 12.72 | 0.00 | 41.82 | 3.49 |
4249 | 4915 | 9.859152 | AACCTAATACTCCGTTACTAATAGAGT | 57.141 | 33.333 | 0.00 | 0.00 | 42.69 | 3.24 |
4254 | 4920 | 9.592196 | TCCATAACCTAATACTCCGTTACTAAT | 57.408 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
4255 | 4921 | 8.995027 | TCCATAACCTAATACTCCGTTACTAA | 57.005 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
4256 | 4922 | 8.995027 | TTCCATAACCTAATACTCCGTTACTA | 57.005 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
4257 | 4923 | 7.902920 | TTCCATAACCTAATACTCCGTTACT | 57.097 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
4258 | 4924 | 7.540055 | CGATTCCATAACCTAATACTCCGTTAC | 59.460 | 40.741 | 0.00 | 0.00 | 0.00 | 2.50 |
4259 | 4925 | 7.309377 | CCGATTCCATAACCTAATACTCCGTTA | 60.309 | 40.741 | 0.00 | 0.00 | 0.00 | 3.18 |
4260 | 4926 | 6.453092 | CGATTCCATAACCTAATACTCCGTT | 58.547 | 40.000 | 0.00 | 0.00 | 0.00 | 4.44 |
4261 | 4927 | 5.047519 | CCGATTCCATAACCTAATACTCCGT | 60.048 | 44.000 | 0.00 | 0.00 | 0.00 | 4.69 |
4262 | 4928 | 5.047519 | ACCGATTCCATAACCTAATACTCCG | 60.048 | 44.000 | 0.00 | 0.00 | 0.00 | 4.63 |
4263 | 4929 | 6.164176 | CACCGATTCCATAACCTAATACTCC | 58.836 | 44.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4264 | 4930 | 6.164176 | CCACCGATTCCATAACCTAATACTC | 58.836 | 44.000 | 0.00 | 0.00 | 0.00 | 2.59 |
4265 | 4931 | 5.605488 | ACCACCGATTCCATAACCTAATACT | 59.395 | 40.000 | 0.00 | 0.00 | 0.00 | 2.12 |
4266 | 4932 | 5.699458 | CACCACCGATTCCATAACCTAATAC | 59.301 | 44.000 | 0.00 | 0.00 | 0.00 | 1.89 |
4267 | 4933 | 5.743714 | GCACCACCGATTCCATAACCTAATA | 60.744 | 44.000 | 0.00 | 0.00 | 0.00 | 0.98 |
4268 | 4934 | 4.714632 | CACCACCGATTCCATAACCTAAT | 58.285 | 43.478 | 0.00 | 0.00 | 0.00 | 1.73 |
4269 | 4935 | 3.683281 | GCACCACCGATTCCATAACCTAA | 60.683 | 47.826 | 0.00 | 0.00 | 0.00 | 2.69 |
4270 | 4936 | 2.158871 | GCACCACCGATTCCATAACCTA | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 3.08 |
4271 | 4937 | 1.408266 | GCACCACCGATTCCATAACCT | 60.408 | 52.381 | 0.00 | 0.00 | 0.00 | 3.50 |
4272 | 4938 | 1.021968 | GCACCACCGATTCCATAACC | 58.978 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
4273 | 4939 | 2.038387 | AGCACCACCGATTCCATAAC | 57.962 | 50.000 | 0.00 | 0.00 | 0.00 | 1.89 |
4274 | 4940 | 2.769663 | ACTAGCACCACCGATTCCATAA | 59.230 | 45.455 | 0.00 | 0.00 | 0.00 | 1.90 |
4275 | 4941 | 2.102420 | CACTAGCACCACCGATTCCATA | 59.898 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
4276 | 4942 | 1.134401 | CACTAGCACCACCGATTCCAT | 60.134 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
4277 | 4943 | 0.249120 | CACTAGCACCACCGATTCCA | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
4278 | 4944 | 0.249398 | ACACTAGCACCACCGATTCC | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
4279 | 4945 | 1.359848 | CACACTAGCACCACCGATTC | 58.640 | 55.000 | 0.00 | 0.00 | 0.00 | 2.52 |
4280 | 4946 | 0.036388 | CCACACTAGCACCACCGATT | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 3.34 |
4281 | 4947 | 1.596934 | CCACACTAGCACCACCGAT | 59.403 | 57.895 | 0.00 | 0.00 | 0.00 | 4.18 |
4282 | 4948 | 3.056458 | CCACACTAGCACCACCGA | 58.944 | 61.111 | 0.00 | 0.00 | 0.00 | 4.69 |
4283 | 4949 | 2.731691 | AAGCCACACTAGCACCACCG | 62.732 | 60.000 | 0.00 | 0.00 | 0.00 | 4.94 |
4284 | 4950 | 1.073199 | AAGCCACACTAGCACCACC | 59.927 | 57.895 | 0.00 | 0.00 | 0.00 | 4.61 |
4285 | 4951 | 0.535102 | ACAAGCCACACTAGCACCAC | 60.535 | 55.000 | 0.00 | 0.00 | 0.00 | 4.16 |
4286 | 4952 | 0.182537 | AACAAGCCACACTAGCACCA | 59.817 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
4287 | 4953 | 1.001378 | CAAACAAGCCACACTAGCACC | 60.001 | 52.381 | 0.00 | 0.00 | 0.00 | 5.01 |
4288 | 4954 | 1.600413 | GCAAACAAGCCACACTAGCAC | 60.600 | 52.381 | 0.00 | 0.00 | 0.00 | 4.40 |
4289 | 4955 | 0.667993 | GCAAACAAGCCACACTAGCA | 59.332 | 50.000 | 0.00 | 0.00 | 0.00 | 3.49 |
4290 | 4956 | 0.385974 | CGCAAACAAGCCACACTAGC | 60.386 | 55.000 | 0.00 | 0.00 | 0.00 | 3.42 |
4291 | 4957 | 1.069906 | GTCGCAAACAAGCCACACTAG | 60.070 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
4292 | 4958 | 0.941542 | GTCGCAAACAAGCCACACTA | 59.058 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
4293 | 4959 | 0.748005 | AGTCGCAAACAAGCCACACT | 60.748 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
4294 | 4960 | 0.100503 | AAGTCGCAAACAAGCCACAC | 59.899 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
4295 | 4961 | 1.669604 | TAAGTCGCAAACAAGCCACA | 58.330 | 45.000 | 0.00 | 0.00 | 0.00 | 4.17 |
4296 | 4962 | 2.766970 | TTAAGTCGCAAACAAGCCAC | 57.233 | 45.000 | 0.00 | 0.00 | 0.00 | 5.01 |
4297 | 4963 | 4.295051 | GAAATTAAGTCGCAAACAAGCCA | 58.705 | 39.130 | 0.00 | 0.00 | 0.00 | 4.75 |
4298 | 4964 | 3.673338 | GGAAATTAAGTCGCAAACAAGCC | 59.327 | 43.478 | 0.00 | 0.00 | 0.00 | 4.35 |
4299 | 4965 | 3.360758 | CGGAAATTAAGTCGCAAACAAGC | 59.639 | 43.478 | 0.00 | 0.00 | 0.00 | 4.01 |
4300 | 4966 | 3.911964 | CCGGAAATTAAGTCGCAAACAAG | 59.088 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
4301 | 4967 | 3.315749 | ACCGGAAATTAAGTCGCAAACAA | 59.684 | 39.130 | 9.46 | 0.00 | 0.00 | 2.83 |
4302 | 4968 | 2.879646 | ACCGGAAATTAAGTCGCAAACA | 59.120 | 40.909 | 9.46 | 0.00 | 0.00 | 2.83 |
4303 | 4969 | 3.231160 | CACCGGAAATTAAGTCGCAAAC | 58.769 | 45.455 | 9.46 | 0.00 | 0.00 | 2.93 |
4304 | 4970 | 2.226912 | CCACCGGAAATTAAGTCGCAAA | 59.773 | 45.455 | 9.46 | 0.00 | 0.00 | 3.68 |
4305 | 4971 | 1.807742 | CCACCGGAAATTAAGTCGCAA | 59.192 | 47.619 | 9.46 | 0.00 | 0.00 | 4.85 |
4306 | 4972 | 1.444836 | CCACCGGAAATTAAGTCGCA | 58.555 | 50.000 | 9.46 | 0.00 | 0.00 | 5.10 |
4307 | 4973 | 0.730840 | CCCACCGGAAATTAAGTCGC | 59.269 | 55.000 | 9.46 | 0.00 | 0.00 | 5.19 |
4308 | 4974 | 2.277084 | CTCCCACCGGAAATTAAGTCG | 58.723 | 52.381 | 9.46 | 0.00 | 37.86 | 4.18 |
4309 | 4975 | 2.014857 | GCTCCCACCGGAAATTAAGTC | 58.985 | 52.381 | 9.46 | 0.00 | 37.86 | 3.01 |
4310 | 4976 | 1.633945 | AGCTCCCACCGGAAATTAAGT | 59.366 | 47.619 | 9.46 | 0.00 | 37.86 | 2.24 |
4311 | 4977 | 2.017049 | CAGCTCCCACCGGAAATTAAG | 58.983 | 52.381 | 9.46 | 0.00 | 37.86 | 1.85 |
4312 | 4978 | 1.953311 | GCAGCTCCCACCGGAAATTAA | 60.953 | 52.381 | 9.46 | 0.00 | 37.86 | 1.40 |
4313 | 4979 | 0.393808 | GCAGCTCCCACCGGAAATTA | 60.394 | 55.000 | 9.46 | 0.00 | 37.86 | 1.40 |
4314 | 4980 | 1.678970 | GCAGCTCCCACCGGAAATT | 60.679 | 57.895 | 9.46 | 0.00 | 37.86 | 1.82 |
4315 | 4981 | 2.044946 | GCAGCTCCCACCGGAAAT | 60.045 | 61.111 | 9.46 | 0.00 | 37.86 | 2.17 |
4316 | 4982 | 2.424842 | AATGCAGCTCCCACCGGAAA | 62.425 | 55.000 | 9.46 | 0.00 | 37.86 | 3.13 |
4317 | 4983 | 2.424842 | AAATGCAGCTCCCACCGGAA | 62.425 | 55.000 | 9.46 | 0.00 | 37.86 | 4.30 |
4318 | 4984 | 2.905996 | AAATGCAGCTCCCACCGGA | 61.906 | 57.895 | 9.46 | 0.00 | 36.45 | 5.14 |
4319 | 4985 | 2.361610 | AAATGCAGCTCCCACCGG | 60.362 | 61.111 | 0.00 | 0.00 | 0.00 | 5.28 |
4320 | 4986 | 0.676466 | TACAAATGCAGCTCCCACCG | 60.676 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
4321 | 4987 | 0.811281 | GTACAAATGCAGCTCCCACC | 59.189 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
4322 | 4988 | 1.740025 | GAGTACAAATGCAGCTCCCAC | 59.260 | 52.381 | 0.00 | 0.00 | 0.00 | 4.61 |
4323 | 4989 | 1.340017 | GGAGTACAAATGCAGCTCCCA | 60.340 | 52.381 | 0.00 | 0.00 | 39.69 | 4.37 |
4324 | 4990 | 1.383523 | GGAGTACAAATGCAGCTCCC | 58.616 | 55.000 | 0.00 | 0.00 | 39.69 | 4.30 |
4325 | 4991 | 1.065126 | AGGGAGTACAAATGCAGCTCC | 60.065 | 52.381 | 0.00 | 2.29 | 43.56 | 4.70 |
4326 | 4992 | 2.093235 | AGAGGGAGTACAAATGCAGCTC | 60.093 | 50.000 | 0.00 | 0.00 | 0.00 | 4.09 |
4327 | 4993 | 1.912043 | AGAGGGAGTACAAATGCAGCT | 59.088 | 47.619 | 0.00 | 0.00 | 0.00 | 4.24 |
4328 | 4994 | 2.012673 | CAGAGGGAGTACAAATGCAGC | 58.987 | 52.381 | 0.00 | 0.00 | 0.00 | 5.25 |
4329 | 4995 | 2.012673 | GCAGAGGGAGTACAAATGCAG | 58.987 | 52.381 | 0.00 | 0.00 | 32.58 | 4.41 |
4330 | 4996 | 1.340017 | GGCAGAGGGAGTACAAATGCA | 60.340 | 52.381 | 0.00 | 0.00 | 33.94 | 3.96 |
4331 | 4997 | 1.383523 | GGCAGAGGGAGTACAAATGC | 58.616 | 55.000 | 0.00 | 0.00 | 0.00 | 3.56 |
4332 | 4998 | 1.408822 | GGGGCAGAGGGAGTACAAATG | 60.409 | 57.143 | 0.00 | 0.00 | 0.00 | 2.32 |
4333 | 4999 | 0.919710 | GGGGCAGAGGGAGTACAAAT | 59.080 | 55.000 | 0.00 | 0.00 | 0.00 | 2.32 |
4334 | 5000 | 0.474854 | TGGGGCAGAGGGAGTACAAA | 60.475 | 55.000 | 0.00 | 0.00 | 0.00 | 2.83 |
4335 | 5001 | 0.253160 | ATGGGGCAGAGGGAGTACAA | 60.253 | 55.000 | 0.00 | 0.00 | 0.00 | 2.41 |
4336 | 5002 | 0.639943 | TATGGGGCAGAGGGAGTACA | 59.360 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
4337 | 5003 | 1.802553 | TTATGGGGCAGAGGGAGTAC | 58.197 | 55.000 | 0.00 | 0.00 | 0.00 | 2.73 |
4338 | 5004 | 2.815357 | ATTATGGGGCAGAGGGAGTA | 57.185 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
4339 | 5005 | 2.711547 | GTTATTATGGGGCAGAGGGAGT | 59.288 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4340 | 5006 | 2.040412 | GGTTATTATGGGGCAGAGGGAG | 59.960 | 54.545 | 0.00 | 0.00 | 0.00 | 4.30 |
4341 | 5007 | 2.062636 | GGTTATTATGGGGCAGAGGGA | 58.937 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
4342 | 5008 | 1.780309 | TGGTTATTATGGGGCAGAGGG | 59.220 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
4343 | 5009 | 3.814504 | ATGGTTATTATGGGGCAGAGG | 57.185 | 47.619 | 0.00 | 0.00 | 0.00 | 3.69 |
4378 | 5044 | 9.453325 | CGTTTTTCAAGCTATGGTAACTTAAAA | 57.547 | 29.630 | 0.00 | 0.00 | 37.61 | 1.52 |
4379 | 5045 | 8.623030 | ACGTTTTTCAAGCTATGGTAACTTAAA | 58.377 | 29.630 | 0.00 | 0.00 | 37.61 | 1.52 |
4380 | 5046 | 8.156994 | ACGTTTTTCAAGCTATGGTAACTTAA | 57.843 | 30.769 | 0.00 | 0.00 | 37.61 | 1.85 |
4381 | 5047 | 7.733402 | ACGTTTTTCAAGCTATGGTAACTTA | 57.267 | 32.000 | 0.00 | 0.00 | 37.61 | 2.24 |
4382 | 5048 | 6.628919 | ACGTTTTTCAAGCTATGGTAACTT | 57.371 | 33.333 | 0.00 | 0.00 | 37.61 | 2.66 |
4383 | 5049 | 6.485648 | AGAACGTTTTTCAAGCTATGGTAACT | 59.514 | 34.615 | 0.46 | 0.00 | 37.61 | 2.24 |
4384 | 5050 | 6.665465 | AGAACGTTTTTCAAGCTATGGTAAC | 58.335 | 36.000 | 0.46 | 0.00 | 0.00 | 2.50 |
4385 | 5051 | 6.870971 | AGAACGTTTTTCAAGCTATGGTAA | 57.129 | 33.333 | 0.46 | 0.00 | 0.00 | 2.85 |
4386 | 5052 | 6.870971 | AAGAACGTTTTTCAAGCTATGGTA | 57.129 | 33.333 | 0.46 | 0.00 | 0.00 | 3.25 |
4387 | 5053 | 5.767816 | AAGAACGTTTTTCAAGCTATGGT | 57.232 | 34.783 | 0.46 | 0.00 | 0.00 | 3.55 |
4404 | 5070 | 8.897872 | TCCTTCCGTTCCATAATATAAAGAAC | 57.102 | 34.615 | 0.00 | 0.00 | 34.78 | 3.01 |
4405 | 5071 | 8.711170 | ACTCCTTCCGTTCCATAATATAAAGAA | 58.289 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
4406 | 5072 | 8.258850 | ACTCCTTCCGTTCCATAATATAAAGA | 57.741 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
4407 | 5073 | 9.640963 | CTACTCCTTCCGTTCCATAATATAAAG | 57.359 | 37.037 | 0.00 | 0.00 | 0.00 | 1.85 |
4408 | 5074 | 8.591072 | CCTACTCCTTCCGTTCCATAATATAAA | 58.409 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
4409 | 5075 | 7.731688 | ACCTACTCCTTCCGTTCCATAATATAA | 59.268 | 37.037 | 0.00 | 0.00 | 0.00 | 0.98 |
4410 | 5076 | 7.243824 | ACCTACTCCTTCCGTTCCATAATATA | 58.756 | 38.462 | 0.00 | 0.00 | 0.00 | 0.86 |
4411 | 5077 | 6.082707 | ACCTACTCCTTCCGTTCCATAATAT | 58.917 | 40.000 | 0.00 | 0.00 | 0.00 | 1.28 |
4412 | 5078 | 5.461327 | ACCTACTCCTTCCGTTCCATAATA | 58.539 | 41.667 | 0.00 | 0.00 | 0.00 | 0.98 |
4413 | 5079 | 4.296056 | ACCTACTCCTTCCGTTCCATAAT | 58.704 | 43.478 | 0.00 | 0.00 | 0.00 | 1.28 |
4414 | 5080 | 3.716431 | ACCTACTCCTTCCGTTCCATAA | 58.284 | 45.455 | 0.00 | 0.00 | 0.00 | 1.90 |
4415 | 5081 | 3.393426 | ACCTACTCCTTCCGTTCCATA | 57.607 | 47.619 | 0.00 | 0.00 | 0.00 | 2.74 |
4416 | 5082 | 2.249309 | ACCTACTCCTTCCGTTCCAT | 57.751 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
4417 | 5083 | 3.780307 | ACCTACTCCTTCCGTTCCA | 57.220 | 52.632 | 0.00 | 0.00 | 0.00 | 3.53 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.