Multiple sequence alignment - TraesCS7D01G179400
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G179400 | chr7D | 100.000 | 2748 | 0 | 0 | 1 | 2748 | 132765425 | 132762678 | 0.000000e+00 | 5075.0 |
1 | TraesCS7D01G179400 | chr7D | 88.696 | 1955 | 132 | 40 | 657 | 2568 | 132831090 | 132829182 | 0.000000e+00 | 2303.0 |
2 | TraesCS7D01G179400 | chr7D | 87.606 | 1646 | 122 | 37 | 721 | 2313 | 194129233 | 194130849 | 0.000000e+00 | 1834.0 |
3 | TraesCS7D01G179400 | chr7D | 90.754 | 1352 | 79 | 18 | 976 | 2313 | 132741220 | 132742539 | 0.000000e+00 | 1762.0 |
4 | TraesCS7D01G179400 | chr7D | 85.601 | 1639 | 118 | 46 | 722 | 2291 | 132135488 | 132137077 | 0.000000e+00 | 1611.0 |
5 | TraesCS7D01G179400 | chr7D | 88.567 | 1347 | 87 | 27 | 747 | 2069 | 132156996 | 132158299 | 0.000000e+00 | 1572.0 |
6 | TraesCS7D01G179400 | chr7D | 83.968 | 761 | 71 | 26 | 1948 | 2686 | 132158116 | 132158847 | 0.000000e+00 | 682.0 |
7 | TraesCS7D01G179400 | chr7D | 86.508 | 252 | 24 | 5 | 2072 | 2313 | 132138043 | 132138294 | 4.510000e-68 | 268.0 |
8 | TraesCS7D01G179400 | chr7D | 87.137 | 241 | 10 | 10 | 2505 | 2735 | 132138380 | 132138609 | 1.260000e-63 | 254.0 |
9 | TraesCS7D01G179400 | chr7D | 86.147 | 231 | 16 | 10 | 2505 | 2735 | 132742625 | 132742839 | 4.580000e-58 | 235.0 |
10 | TraesCS7D01G179400 | chr7D | 91.270 | 126 | 6 | 3 | 2437 | 2560 | 194130893 | 194131015 | 1.690000e-37 | 167.0 |
11 | TraesCS7D01G179400 | chr7D | 90.476 | 126 | 5 | 5 | 2437 | 2560 | 132749460 | 132749580 | 2.830000e-35 | 159.0 |
12 | TraesCS7D01G179400 | chr7D | 83.333 | 156 | 11 | 3 | 2577 | 2732 | 132204822 | 132204962 | 2.220000e-26 | 130.0 |
13 | TraesCS7D01G179400 | chr7D | 100.000 | 28 | 0 | 0 | 2364 | 2391 | 132749406 | 132749433 | 5.000000e-03 | 52.8 |
14 | TraesCS7D01G179400 | chr7A | 89.192 | 1869 | 118 | 45 | 887 | 2735 | 210252293 | 210254097 | 0.000000e+00 | 2255.0 |
15 | TraesCS7D01G179400 | chr7A | 89.886 | 1750 | 99 | 24 | 1026 | 2748 | 131109279 | 131107581 | 0.000000e+00 | 2180.0 |
16 | TraesCS7D01G179400 | chr7A | 86.529 | 1648 | 155 | 35 | 679 | 2280 | 131187744 | 131186118 | 0.000000e+00 | 1751.0 |
17 | TraesCS7D01G179400 | chr7A | 85.617 | 1613 | 110 | 50 | 666 | 2212 | 130782220 | 130783776 | 0.000000e+00 | 1581.0 |
18 | TraesCS7D01G179400 | chr7A | 85.617 | 1613 | 110 | 50 | 666 | 2212 | 131121715 | 131120159 | 0.000000e+00 | 1581.0 |
19 | TraesCS7D01G179400 | chr7A | 89.005 | 1055 | 64 | 14 | 1291 | 2313 | 203697298 | 203698332 | 0.000000e+00 | 1258.0 |
20 | TraesCS7D01G179400 | chr7A | 88.440 | 718 | 41 | 15 | 1502 | 2219 | 130893568 | 130894243 | 0.000000e+00 | 828.0 |
21 | TraesCS7D01G179400 | chr7A | 86.055 | 796 | 61 | 15 | 730 | 1504 | 130891568 | 130892334 | 0.000000e+00 | 809.0 |
22 | TraesCS7D01G179400 | chr7A | 86.532 | 594 | 59 | 18 | 721 | 1295 | 203694926 | 203695517 | 3.860000e-178 | 634.0 |
23 | TraesCS7D01G179400 | chr7A | 88.085 | 235 | 13 | 8 | 2505 | 2735 | 130784130 | 130784353 | 5.840000e-67 | 265.0 |
24 | TraesCS7D01G179400 | chr7A | 88.085 | 235 | 13 | 8 | 2508 | 2738 | 131119802 | 131119579 | 5.840000e-67 | 265.0 |
25 | TraesCS7D01G179400 | chr7A | 88.496 | 113 | 12 | 1 | 51 | 163 | 26976117 | 26976228 | 4.770000e-28 | 135.0 |
26 | TraesCS7D01G179400 | chr7B | 89.237 | 1598 | 104 | 33 | 721 | 2279 | 94118553 | 94116985 | 0.000000e+00 | 1936.0 |
27 | TraesCS7D01G179400 | chr7B | 88.418 | 1606 | 117 | 33 | 743 | 2290 | 157808284 | 157809878 | 0.000000e+00 | 1871.0 |
28 | TraesCS7D01G179400 | chr7B | 88.691 | 1459 | 93 | 38 | 677 | 2110 | 94186520 | 94185109 | 0.000000e+00 | 1714.0 |
29 | TraesCS7D01G179400 | chr7B | 89.239 | 1236 | 92 | 24 | 666 | 1876 | 93571290 | 93572509 | 0.000000e+00 | 1507.0 |
30 | TraesCS7D01G179400 | chr7B | 88.130 | 1171 | 68 | 32 | 730 | 1876 | 93650475 | 93651598 | 0.000000e+00 | 1327.0 |
31 | TraesCS7D01G179400 | chr7B | 89.630 | 974 | 66 | 18 | 736 | 1682 | 94050981 | 94050016 | 0.000000e+00 | 1206.0 |
32 | TraesCS7D01G179400 | chr7B | 82.560 | 625 | 69 | 22 | 2071 | 2682 | 93651863 | 93652460 | 5.250000e-142 | 514.0 |
33 | TraesCS7D01G179400 | chr7B | 83.022 | 536 | 43 | 27 | 741 | 1249 | 93864467 | 93864981 | 2.510000e-120 | 442.0 |
34 | TraesCS7D01G179400 | chr7B | 78.745 | 701 | 70 | 43 | 1951 | 2577 | 94185333 | 94184638 | 1.980000e-106 | 396.0 |
35 | TraesCS7D01G179400 | chr7B | 85.498 | 331 | 48 | 0 | 271 | 601 | 94186876 | 94186546 | 2.030000e-91 | 346.0 |
36 | TraesCS7D01G179400 | chr7B | 77.726 | 642 | 83 | 35 | 255 | 885 | 94143701 | 94143109 | 3.390000e-89 | 339.0 |
37 | TraesCS7D01G179400 | chr7B | 78.287 | 502 | 49 | 31 | 1951 | 2394 | 94142561 | 94142062 | 4.510000e-68 | 268.0 |
38 | TraesCS7D01G179400 | chr7B | 88.652 | 141 | 9 | 6 | 2422 | 2560 | 93576511 | 93576646 | 6.090000e-37 | 165.0 |
39 | TraesCS7D01G179400 | chr7B | 91.818 | 110 | 9 | 0 | 54 | 163 | 245073354 | 245073463 | 1.320000e-33 | 154.0 |
40 | TraesCS7D01G179400 | chr3D | 90.909 | 110 | 7 | 2 | 54 | 163 | 558783680 | 558783786 | 7.930000e-31 | 145.0 |
41 | TraesCS7D01G179400 | chr3B | 90.000 | 110 | 11 | 0 | 54 | 163 | 735248720 | 735248829 | 2.850000e-30 | 143.0 |
42 | TraesCS7D01G179400 | chr3B | 90.090 | 111 | 10 | 1 | 54 | 163 | 762954035 | 762953925 | 2.850000e-30 | 143.0 |
43 | TraesCS7D01G179400 | chr4D | 86.441 | 118 | 15 | 1 | 54 | 170 | 8074746 | 8074629 | 7.990000e-26 | 128.0 |
44 | TraesCS7D01G179400 | chr4B | 86.957 | 115 | 13 | 2 | 50 | 163 | 639250225 | 639250112 | 7.990000e-26 | 128.0 |
45 | TraesCS7D01G179400 | chr2A | 85.833 | 120 | 17 | 0 | 51 | 170 | 522824752 | 522824633 | 7.990000e-26 | 128.0 |
46 | TraesCS7D01G179400 | chr1A | 86.364 | 110 | 15 | 0 | 54 | 163 | 495710075 | 495709966 | 1.340000e-23 | 121.0 |
47 | TraesCS7D01G179400 | chr5B | 97.727 | 44 | 1 | 0 | 2652 | 2695 | 631208767 | 631208724 | 2.930000e-10 | 76.8 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G179400 | chr7D | 132762678 | 132765425 | 2747 | True | 5075.000000 | 5075 | 100.000000 | 1 | 2748 | 1 | chr7D.!!$R1 | 2747 |
1 | TraesCS7D01G179400 | chr7D | 132829182 | 132831090 | 1908 | True | 2303.000000 | 2303 | 88.696000 | 657 | 2568 | 1 | chr7D.!!$R2 | 1911 |
2 | TraesCS7D01G179400 | chr7D | 132156996 | 132158847 | 1851 | False | 1127.000000 | 1572 | 86.267500 | 747 | 2686 | 2 | chr7D.!!$F3 | 1939 |
3 | TraesCS7D01G179400 | chr7D | 194129233 | 194131015 | 1782 | False | 1000.500000 | 1834 | 89.438000 | 721 | 2560 | 2 | chr7D.!!$F6 | 1839 |
4 | TraesCS7D01G179400 | chr7D | 132741220 | 132742839 | 1619 | False | 998.500000 | 1762 | 88.450500 | 976 | 2735 | 2 | chr7D.!!$F4 | 1759 |
5 | TraesCS7D01G179400 | chr7D | 132135488 | 132138609 | 3121 | False | 711.000000 | 1611 | 86.415333 | 722 | 2735 | 3 | chr7D.!!$F2 | 2013 |
6 | TraesCS7D01G179400 | chr7A | 210252293 | 210254097 | 1804 | False | 2255.000000 | 2255 | 89.192000 | 887 | 2735 | 1 | chr7A.!!$F2 | 1848 |
7 | TraesCS7D01G179400 | chr7A | 131107581 | 131109279 | 1698 | True | 2180.000000 | 2180 | 89.886000 | 1026 | 2748 | 1 | chr7A.!!$R1 | 1722 |
8 | TraesCS7D01G179400 | chr7A | 131186118 | 131187744 | 1626 | True | 1751.000000 | 1751 | 86.529000 | 679 | 2280 | 1 | chr7A.!!$R2 | 1601 |
9 | TraesCS7D01G179400 | chr7A | 203694926 | 203698332 | 3406 | False | 946.000000 | 1258 | 87.768500 | 721 | 2313 | 2 | chr7A.!!$F5 | 1592 |
10 | TraesCS7D01G179400 | chr7A | 130782220 | 130784353 | 2133 | False | 923.000000 | 1581 | 86.851000 | 666 | 2735 | 2 | chr7A.!!$F3 | 2069 |
11 | TraesCS7D01G179400 | chr7A | 131119579 | 131121715 | 2136 | True | 923.000000 | 1581 | 86.851000 | 666 | 2738 | 2 | chr7A.!!$R3 | 2072 |
12 | TraesCS7D01G179400 | chr7A | 130891568 | 130894243 | 2675 | False | 818.500000 | 828 | 87.247500 | 730 | 2219 | 2 | chr7A.!!$F4 | 1489 |
13 | TraesCS7D01G179400 | chr7B | 94116985 | 94118553 | 1568 | True | 1936.000000 | 1936 | 89.237000 | 721 | 2279 | 1 | chr7B.!!$R2 | 1558 |
14 | TraesCS7D01G179400 | chr7B | 157808284 | 157809878 | 1594 | False | 1871.000000 | 1871 | 88.418000 | 743 | 2290 | 1 | chr7B.!!$F4 | 1547 |
15 | TraesCS7D01G179400 | chr7B | 93571290 | 93572509 | 1219 | False | 1507.000000 | 1507 | 89.239000 | 666 | 1876 | 1 | chr7B.!!$F1 | 1210 |
16 | TraesCS7D01G179400 | chr7B | 94050016 | 94050981 | 965 | True | 1206.000000 | 1206 | 89.630000 | 736 | 1682 | 1 | chr7B.!!$R1 | 946 |
17 | TraesCS7D01G179400 | chr7B | 93650475 | 93652460 | 1985 | False | 920.500000 | 1327 | 85.345000 | 730 | 2682 | 2 | chr7B.!!$F6 | 1952 |
18 | TraesCS7D01G179400 | chr7B | 94184638 | 94186876 | 2238 | True | 818.666667 | 1714 | 84.311333 | 271 | 2577 | 3 | chr7B.!!$R4 | 2306 |
19 | TraesCS7D01G179400 | chr7B | 93864467 | 93864981 | 514 | False | 442.000000 | 442 | 83.022000 | 741 | 1249 | 1 | chr7B.!!$F3 | 508 |
20 | TraesCS7D01G179400 | chr7B | 94142062 | 94143701 | 1639 | True | 303.500000 | 339 | 78.006500 | 255 | 2394 | 2 | chr7B.!!$R3 | 2139 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
249 | 250 | 0.100682 | CGCCTGACATGTAGCTACGT | 59.899 | 55.0 | 18.74 | 16.0 | 0.0 | 3.57 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1758 | 4951 | 0.1791 | CACCTCCATGAGCACTACCG | 60.179 | 60.0 | 0.0 | 0.0 | 0.0 | 4.02 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
20 | 21 | 2.706890 | TGGGCCTAAAATCGACTGAAC | 58.293 | 47.619 | 4.53 | 0.00 | 0.00 | 3.18 |
21 | 22 | 2.039216 | TGGGCCTAAAATCGACTGAACA | 59.961 | 45.455 | 4.53 | 0.00 | 0.00 | 3.18 |
22 | 23 | 3.078837 | GGGCCTAAAATCGACTGAACAA | 58.921 | 45.455 | 0.84 | 0.00 | 0.00 | 2.83 |
23 | 24 | 3.127030 | GGGCCTAAAATCGACTGAACAAG | 59.873 | 47.826 | 0.84 | 0.00 | 0.00 | 3.16 |
24 | 25 | 3.751698 | GGCCTAAAATCGACTGAACAAGT | 59.248 | 43.478 | 0.00 | 0.00 | 43.85 | 3.16 |
25 | 26 | 4.933400 | GGCCTAAAATCGACTGAACAAGTA | 59.067 | 41.667 | 0.00 | 0.00 | 40.07 | 2.24 |
26 | 27 | 5.410439 | GGCCTAAAATCGACTGAACAAGTAA | 59.590 | 40.000 | 0.00 | 0.00 | 40.07 | 2.24 |
27 | 28 | 6.304882 | GCCTAAAATCGACTGAACAAGTAAC | 58.695 | 40.000 | 0.00 | 0.00 | 40.07 | 2.50 |
28 | 29 | 6.522761 | CCTAAAATCGACTGAACAAGTAACG | 58.477 | 40.000 | 0.00 | 0.00 | 40.07 | 3.18 |
29 | 30 | 4.985044 | AAATCGACTGAACAAGTAACGG | 57.015 | 40.909 | 0.00 | 0.00 | 40.07 | 4.44 |
30 | 31 | 3.928727 | ATCGACTGAACAAGTAACGGA | 57.071 | 42.857 | 0.00 | 0.00 | 40.07 | 4.69 |
31 | 32 | 3.278367 | TCGACTGAACAAGTAACGGAG | 57.722 | 47.619 | 0.00 | 0.00 | 40.07 | 4.63 |
32 | 33 | 2.620115 | TCGACTGAACAAGTAACGGAGT | 59.380 | 45.455 | 0.00 | 0.00 | 41.60 | 3.85 |
33 | 34 | 2.978489 | CGACTGAACAAGTAACGGAGTC | 59.022 | 50.000 | 0.00 | 0.00 | 39.03 | 3.36 |
34 | 35 | 3.549423 | CGACTGAACAAGTAACGGAGTCA | 60.549 | 47.826 | 0.00 | 0.00 | 39.03 | 3.41 |
35 | 36 | 3.714391 | ACTGAACAAGTAACGGAGTCAC | 58.286 | 45.455 | 0.00 | 0.00 | 45.00 | 3.67 |
36 | 37 | 3.383825 | ACTGAACAAGTAACGGAGTCACT | 59.616 | 43.478 | 0.00 | 0.00 | 45.00 | 3.41 |
37 | 38 | 3.973657 | TGAACAAGTAACGGAGTCACTC | 58.026 | 45.455 | 0.00 | 0.00 | 45.00 | 3.51 |
38 | 39 | 2.701073 | ACAAGTAACGGAGTCACTCG | 57.299 | 50.000 | 0.00 | 0.00 | 45.00 | 4.18 |
39 | 40 | 2.224606 | ACAAGTAACGGAGTCACTCGA | 58.775 | 47.619 | 0.00 | 0.00 | 45.00 | 4.04 |
40 | 41 | 2.031333 | ACAAGTAACGGAGTCACTCGAC | 60.031 | 50.000 | 0.00 | 0.00 | 45.00 | 4.20 |
41 | 42 | 1.163554 | AGTAACGGAGTCACTCGACC | 58.836 | 55.000 | 0.00 | 0.00 | 45.00 | 4.79 |
42 | 43 | 1.163554 | GTAACGGAGTCACTCGACCT | 58.836 | 55.000 | 0.00 | 0.00 | 45.00 | 3.85 |
43 | 44 | 1.130186 | GTAACGGAGTCACTCGACCTC | 59.870 | 57.143 | 0.00 | 0.00 | 45.00 | 3.85 |
44 | 45 | 1.242665 | AACGGAGTCACTCGACCTCC | 61.243 | 60.000 | 0.00 | 0.00 | 45.00 | 4.30 |
45 | 46 | 1.377463 | CGGAGTCACTCGACCTCCT | 60.377 | 63.158 | 0.00 | 0.00 | 43.73 | 3.69 |
46 | 47 | 0.107800 | CGGAGTCACTCGACCTCCTA | 60.108 | 60.000 | 0.00 | 0.00 | 43.73 | 2.94 |
47 | 48 | 1.381522 | GGAGTCACTCGACCTCCTAC | 58.618 | 60.000 | 0.00 | 0.00 | 43.73 | 3.18 |
48 | 49 | 1.339824 | GGAGTCACTCGACCTCCTACA | 60.340 | 57.143 | 0.00 | 0.00 | 43.73 | 2.74 |
49 | 50 | 1.738908 | GAGTCACTCGACCTCCTACAC | 59.261 | 57.143 | 0.00 | 0.00 | 43.73 | 2.90 |
50 | 51 | 1.073444 | AGTCACTCGACCTCCTACACA | 59.927 | 52.381 | 0.00 | 0.00 | 43.73 | 3.72 |
51 | 52 | 1.199558 | GTCACTCGACCTCCTACACAC | 59.800 | 57.143 | 0.00 | 0.00 | 36.02 | 3.82 |
52 | 53 | 0.526662 | CACTCGACCTCCTACACACC | 59.473 | 60.000 | 0.00 | 0.00 | 0.00 | 4.16 |
53 | 54 | 0.404812 | ACTCGACCTCCTACACACCT | 59.595 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
54 | 55 | 1.632409 | ACTCGACCTCCTACACACCTA | 59.368 | 52.381 | 0.00 | 0.00 | 0.00 | 3.08 |
55 | 56 | 2.015587 | CTCGACCTCCTACACACCTAC | 58.984 | 57.143 | 0.00 | 0.00 | 0.00 | 3.18 |
56 | 57 | 1.632409 | TCGACCTCCTACACACCTACT | 59.368 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
57 | 58 | 2.015587 | CGACCTCCTACACACCTACTC | 58.984 | 57.143 | 0.00 | 0.00 | 0.00 | 2.59 |
58 | 59 | 2.355920 | CGACCTCCTACACACCTACTCT | 60.356 | 54.545 | 0.00 | 0.00 | 0.00 | 3.24 |
59 | 60 | 3.281158 | GACCTCCTACACACCTACTCTC | 58.719 | 54.545 | 0.00 | 0.00 | 0.00 | 3.20 |
60 | 61 | 2.920941 | ACCTCCTACACACCTACTCTCT | 59.079 | 50.000 | 0.00 | 0.00 | 0.00 | 3.10 |
61 | 62 | 4.110072 | ACCTCCTACACACCTACTCTCTA | 58.890 | 47.826 | 0.00 | 0.00 | 0.00 | 2.43 |
62 | 63 | 4.080413 | ACCTCCTACACACCTACTCTCTAC | 60.080 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
63 | 64 | 4.121317 | CTCCTACACACCTACTCTCTACG | 58.879 | 52.174 | 0.00 | 0.00 | 0.00 | 3.51 |
64 | 65 | 3.517100 | TCCTACACACCTACTCTCTACGT | 59.483 | 47.826 | 0.00 | 0.00 | 0.00 | 3.57 |
65 | 66 | 3.870419 | CCTACACACCTACTCTCTACGTC | 59.130 | 52.174 | 0.00 | 0.00 | 0.00 | 4.34 |
66 | 67 | 2.709213 | ACACACCTACTCTCTACGTCC | 58.291 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
67 | 68 | 1.664659 | CACACCTACTCTCTACGTCCG | 59.335 | 57.143 | 0.00 | 0.00 | 0.00 | 4.79 |
68 | 69 | 1.552337 | ACACCTACTCTCTACGTCCGA | 59.448 | 52.381 | 0.00 | 0.00 | 0.00 | 4.55 |
69 | 70 | 2.027745 | ACACCTACTCTCTACGTCCGAA | 60.028 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
70 | 71 | 3.005554 | CACCTACTCTCTACGTCCGAAA | 58.994 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
71 | 72 | 3.438087 | CACCTACTCTCTACGTCCGAAAA | 59.562 | 47.826 | 0.00 | 0.00 | 0.00 | 2.29 |
72 | 73 | 4.096081 | CACCTACTCTCTACGTCCGAAAAT | 59.904 | 45.833 | 0.00 | 0.00 | 0.00 | 1.82 |
73 | 74 | 5.295292 | CACCTACTCTCTACGTCCGAAAATA | 59.705 | 44.000 | 0.00 | 0.00 | 0.00 | 1.40 |
74 | 75 | 5.295540 | ACCTACTCTCTACGTCCGAAAATAC | 59.704 | 44.000 | 0.00 | 0.00 | 0.00 | 1.89 |
75 | 76 | 5.526846 | CCTACTCTCTACGTCCGAAAATACT | 59.473 | 44.000 | 0.00 | 0.00 | 0.00 | 2.12 |
76 | 77 | 5.893897 | ACTCTCTACGTCCGAAAATACTT | 57.106 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
77 | 78 | 6.992063 | ACTCTCTACGTCCGAAAATACTTA | 57.008 | 37.500 | 0.00 | 0.00 | 0.00 | 2.24 |
78 | 79 | 7.565323 | ACTCTCTACGTCCGAAAATACTTAT | 57.435 | 36.000 | 0.00 | 0.00 | 0.00 | 1.73 |
79 | 80 | 7.638134 | ACTCTCTACGTCCGAAAATACTTATC | 58.362 | 38.462 | 0.00 | 0.00 | 0.00 | 1.75 |
80 | 81 | 7.498570 | ACTCTCTACGTCCGAAAATACTTATCT | 59.501 | 37.037 | 0.00 | 0.00 | 0.00 | 1.98 |
81 | 82 | 8.218338 | TCTCTACGTCCGAAAATACTTATCTT | 57.782 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
82 | 83 | 9.330063 | TCTCTACGTCCGAAAATACTTATCTTA | 57.670 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
83 | 84 | 9.941664 | CTCTACGTCCGAAAATACTTATCTTAA | 57.058 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
145 | 146 | 9.226606 | ACATCCGTTTTATTCATTTCTAGAACA | 57.773 | 29.630 | 4.18 | 0.00 | 0.00 | 3.18 |
148 | 149 | 9.280174 | TCCGTTTTATTCATTTCTAGAACAAGT | 57.720 | 29.630 | 4.18 | 0.00 | 0.00 | 3.16 |
157 | 158 | 9.496873 | TTCATTTCTAGAACAAGTATTTTCGGA | 57.503 | 29.630 | 4.18 | 0.00 | 0.00 | 4.55 |
158 | 159 | 8.932791 | TCATTTCTAGAACAAGTATTTTCGGAC | 58.067 | 33.333 | 4.18 | 0.00 | 0.00 | 4.79 |
159 | 160 | 6.939551 | TTCTAGAACAAGTATTTTCGGACG | 57.060 | 37.500 | 0.00 | 0.00 | 0.00 | 4.79 |
160 | 161 | 5.404946 | TCTAGAACAAGTATTTTCGGACGG | 58.595 | 41.667 | 0.00 | 0.00 | 0.00 | 4.79 |
161 | 162 | 4.261578 | AGAACAAGTATTTTCGGACGGA | 57.738 | 40.909 | 0.00 | 0.00 | 0.00 | 4.69 |
162 | 163 | 4.243270 | AGAACAAGTATTTTCGGACGGAG | 58.757 | 43.478 | 0.00 | 0.00 | 0.00 | 4.63 |
163 | 164 | 3.947910 | ACAAGTATTTTCGGACGGAGA | 57.052 | 42.857 | 0.00 | 0.00 | 0.00 | 3.71 |
164 | 165 | 4.261578 | ACAAGTATTTTCGGACGGAGAA | 57.738 | 40.909 | 0.00 | 0.00 | 0.00 | 2.87 |
165 | 166 | 4.243270 | ACAAGTATTTTCGGACGGAGAAG | 58.757 | 43.478 | 0.00 | 0.00 | 0.00 | 2.85 |
166 | 167 | 3.521947 | AGTATTTTCGGACGGAGAAGG | 57.478 | 47.619 | 0.00 | 0.00 | 0.00 | 3.46 |
167 | 168 | 2.830321 | AGTATTTTCGGACGGAGAAGGT | 59.170 | 45.455 | 0.00 | 0.00 | 0.00 | 3.50 |
168 | 169 | 4.019174 | AGTATTTTCGGACGGAGAAGGTA | 58.981 | 43.478 | 0.00 | 0.00 | 0.00 | 3.08 |
169 | 170 | 4.648307 | AGTATTTTCGGACGGAGAAGGTAT | 59.352 | 41.667 | 0.00 | 0.00 | 0.00 | 2.73 |
170 | 171 | 3.515330 | TTTTCGGACGGAGAAGGTATC | 57.485 | 47.619 | 0.00 | 0.00 | 0.00 | 2.24 |
171 | 172 | 2.133281 | TTCGGACGGAGAAGGTATCA | 57.867 | 50.000 | 0.00 | 0.00 | 0.00 | 2.15 |
172 | 173 | 1.386533 | TCGGACGGAGAAGGTATCAC | 58.613 | 55.000 | 0.00 | 0.00 | 0.00 | 3.06 |
173 | 174 | 1.100510 | CGGACGGAGAAGGTATCACA | 58.899 | 55.000 | 0.00 | 0.00 | 0.00 | 3.58 |
174 | 175 | 1.681793 | CGGACGGAGAAGGTATCACAT | 59.318 | 52.381 | 0.00 | 0.00 | 0.00 | 3.21 |
175 | 176 | 2.882761 | CGGACGGAGAAGGTATCACATA | 59.117 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
176 | 177 | 3.317149 | CGGACGGAGAAGGTATCACATAA | 59.683 | 47.826 | 0.00 | 0.00 | 0.00 | 1.90 |
177 | 178 | 4.202080 | CGGACGGAGAAGGTATCACATAAA | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 1.40 |
178 | 179 | 5.290386 | GGACGGAGAAGGTATCACATAAAG | 58.710 | 45.833 | 0.00 | 0.00 | 0.00 | 1.85 |
179 | 180 | 5.163437 | GGACGGAGAAGGTATCACATAAAGT | 60.163 | 44.000 | 0.00 | 0.00 | 0.00 | 2.66 |
180 | 181 | 6.040166 | GGACGGAGAAGGTATCACATAAAGTA | 59.960 | 42.308 | 0.00 | 0.00 | 0.00 | 2.24 |
181 | 182 | 6.803642 | ACGGAGAAGGTATCACATAAAGTAC | 58.196 | 40.000 | 0.00 | 0.00 | 0.00 | 2.73 |
182 | 183 | 6.183360 | ACGGAGAAGGTATCACATAAAGTACC | 60.183 | 42.308 | 0.00 | 0.00 | 37.45 | 3.34 |
183 | 184 | 6.040616 | CGGAGAAGGTATCACATAAAGTACCT | 59.959 | 42.308 | 0.00 | 0.00 | 46.65 | 3.08 |
190 | 191 | 8.768397 | AGGTATCACATAAAGTACCTTGAATCA | 58.232 | 33.333 | 0.00 | 0.00 | 43.22 | 2.57 |
191 | 192 | 9.391006 | GGTATCACATAAAGTACCTTGAATCAA | 57.609 | 33.333 | 0.00 | 0.00 | 34.98 | 2.57 |
193 | 194 | 7.359262 | TCACATAAAGTACCTTGAATCAACG | 57.641 | 36.000 | 0.00 | 0.00 | 0.00 | 4.10 |
194 | 195 | 6.370442 | TCACATAAAGTACCTTGAATCAACGG | 59.630 | 38.462 | 9.04 | 9.04 | 0.00 | 4.44 |
195 | 196 | 5.123344 | ACATAAAGTACCTTGAATCAACGGC | 59.877 | 40.000 | 10.11 | 0.00 | 0.00 | 5.68 |
196 | 197 | 2.851263 | AGTACCTTGAATCAACGGCA | 57.149 | 45.000 | 10.11 | 0.00 | 0.00 | 5.69 |
197 | 198 | 3.134574 | AGTACCTTGAATCAACGGCAA | 57.865 | 42.857 | 10.11 | 0.00 | 0.00 | 4.52 |
198 | 199 | 3.074412 | AGTACCTTGAATCAACGGCAAG | 58.926 | 45.455 | 10.11 | 0.00 | 38.90 | 4.01 |
199 | 200 | 2.270352 | ACCTTGAATCAACGGCAAGA | 57.730 | 45.000 | 10.11 | 0.00 | 41.03 | 3.02 |
200 | 201 | 2.582052 | ACCTTGAATCAACGGCAAGAA | 58.418 | 42.857 | 10.11 | 0.00 | 41.03 | 2.52 |
201 | 202 | 2.955660 | ACCTTGAATCAACGGCAAGAAA | 59.044 | 40.909 | 10.11 | 0.00 | 41.03 | 2.52 |
202 | 203 | 3.383185 | ACCTTGAATCAACGGCAAGAAAA | 59.617 | 39.130 | 10.11 | 0.00 | 41.03 | 2.29 |
203 | 204 | 4.039124 | ACCTTGAATCAACGGCAAGAAAAT | 59.961 | 37.500 | 10.11 | 0.00 | 41.03 | 1.82 |
204 | 205 | 4.990426 | CCTTGAATCAACGGCAAGAAAATT | 59.010 | 37.500 | 0.00 | 0.00 | 41.03 | 1.82 |
205 | 206 | 5.107375 | CCTTGAATCAACGGCAAGAAAATTG | 60.107 | 40.000 | 0.00 | 0.00 | 41.03 | 2.32 |
206 | 207 | 5.193663 | TGAATCAACGGCAAGAAAATTGA | 57.806 | 34.783 | 0.00 | 0.00 | 34.03 | 2.57 |
207 | 208 | 4.981674 | TGAATCAACGGCAAGAAAATTGAC | 59.018 | 37.500 | 0.00 | 0.00 | 32.42 | 3.18 |
208 | 209 | 3.363341 | TCAACGGCAAGAAAATTGACC | 57.637 | 42.857 | 0.00 | 0.00 | 0.00 | 4.02 |
209 | 210 | 2.050691 | CAACGGCAAGAAAATTGACCG | 58.949 | 47.619 | 16.39 | 16.39 | 41.42 | 4.79 |
210 | 211 | 1.600023 | ACGGCAAGAAAATTGACCGA | 58.400 | 45.000 | 21.53 | 0.00 | 39.59 | 4.69 |
211 | 212 | 2.159382 | ACGGCAAGAAAATTGACCGAT | 58.841 | 42.857 | 21.53 | 9.67 | 39.59 | 4.18 |
212 | 213 | 2.161609 | ACGGCAAGAAAATTGACCGATC | 59.838 | 45.455 | 21.53 | 0.00 | 39.59 | 3.69 |
213 | 214 | 2.785679 | GGCAAGAAAATTGACCGATCG | 58.214 | 47.619 | 8.51 | 8.51 | 0.00 | 3.69 |
214 | 215 | 2.418628 | GGCAAGAAAATTGACCGATCGA | 59.581 | 45.455 | 18.66 | 0.00 | 0.00 | 3.59 |
215 | 216 | 3.119990 | GGCAAGAAAATTGACCGATCGAA | 60.120 | 43.478 | 18.66 | 3.01 | 0.00 | 3.71 |
216 | 217 | 4.438744 | GGCAAGAAAATTGACCGATCGAAT | 60.439 | 41.667 | 18.66 | 5.63 | 0.00 | 3.34 |
217 | 218 | 5.220777 | GGCAAGAAAATTGACCGATCGAATA | 60.221 | 40.000 | 18.66 | 0.00 | 0.00 | 1.75 |
218 | 219 | 6.430451 | GCAAGAAAATTGACCGATCGAATAT | 58.570 | 36.000 | 18.66 | 1.38 | 0.00 | 1.28 |
219 | 220 | 6.358030 | GCAAGAAAATTGACCGATCGAATATG | 59.642 | 38.462 | 18.66 | 1.10 | 0.00 | 1.78 |
220 | 221 | 7.630026 | CAAGAAAATTGACCGATCGAATATGA | 58.370 | 34.615 | 18.66 | 0.00 | 0.00 | 2.15 |
221 | 222 | 7.786178 | AGAAAATTGACCGATCGAATATGAA | 57.214 | 32.000 | 18.66 | 0.00 | 0.00 | 2.57 |
222 | 223 | 8.208718 | AGAAAATTGACCGATCGAATATGAAA | 57.791 | 30.769 | 18.66 | 1.42 | 0.00 | 2.69 |
223 | 224 | 8.673711 | AGAAAATTGACCGATCGAATATGAAAA | 58.326 | 29.630 | 18.66 | 0.00 | 0.00 | 2.29 |
224 | 225 | 9.450807 | GAAAATTGACCGATCGAATATGAAAAT | 57.549 | 29.630 | 18.66 | 2.22 | 0.00 | 1.82 |
225 | 226 | 9.450807 | AAAATTGACCGATCGAATATGAAAATC | 57.549 | 29.630 | 18.66 | 0.00 | 0.00 | 2.17 |
226 | 227 | 6.539649 | TTGACCGATCGAATATGAAAATCC | 57.460 | 37.500 | 18.66 | 0.00 | 0.00 | 3.01 |
227 | 228 | 5.606505 | TGACCGATCGAATATGAAAATCCA | 58.393 | 37.500 | 18.66 | 0.00 | 0.00 | 3.41 |
228 | 229 | 5.696270 | TGACCGATCGAATATGAAAATCCAG | 59.304 | 40.000 | 18.66 | 0.00 | 0.00 | 3.86 |
229 | 230 | 5.611374 | ACCGATCGAATATGAAAATCCAGT | 58.389 | 37.500 | 18.66 | 0.00 | 0.00 | 4.00 |
230 | 231 | 5.696724 | ACCGATCGAATATGAAAATCCAGTC | 59.303 | 40.000 | 18.66 | 0.00 | 0.00 | 3.51 |
231 | 232 | 5.164051 | CCGATCGAATATGAAAATCCAGTCG | 60.164 | 44.000 | 18.66 | 0.00 | 0.00 | 4.18 |
232 | 233 | 5.597813 | ATCGAATATGAAAATCCAGTCGC | 57.402 | 39.130 | 0.00 | 0.00 | 0.00 | 5.19 |
233 | 234 | 3.807622 | TCGAATATGAAAATCCAGTCGCC | 59.192 | 43.478 | 0.00 | 0.00 | 0.00 | 5.54 |
234 | 235 | 3.809832 | CGAATATGAAAATCCAGTCGCCT | 59.190 | 43.478 | 0.00 | 0.00 | 0.00 | 5.52 |
235 | 236 | 4.319046 | CGAATATGAAAATCCAGTCGCCTG | 60.319 | 45.833 | 0.00 | 0.00 | 38.50 | 4.85 |
236 | 237 | 2.787473 | ATGAAAATCCAGTCGCCTGA | 57.213 | 45.000 | 0.00 | 0.00 | 41.50 | 3.86 |
237 | 238 | 1.808411 | TGAAAATCCAGTCGCCTGAC | 58.192 | 50.000 | 0.00 | 0.00 | 45.86 | 3.51 |
247 | 248 | 1.841450 | GTCGCCTGACATGTAGCTAC | 58.159 | 55.000 | 17.30 | 17.30 | 44.82 | 3.58 |
248 | 249 | 0.380733 | TCGCCTGACATGTAGCTACG | 59.619 | 55.000 | 18.74 | 8.21 | 0.00 | 3.51 |
249 | 250 | 0.100682 | CGCCTGACATGTAGCTACGT | 59.899 | 55.000 | 18.74 | 16.00 | 0.00 | 3.57 |
250 | 251 | 1.560923 | GCCTGACATGTAGCTACGTG | 58.439 | 55.000 | 34.37 | 34.37 | 46.08 | 4.49 |
251 | 252 | 1.560923 | CCTGACATGTAGCTACGTGC | 58.439 | 55.000 | 35.42 | 28.52 | 44.88 | 5.34 |
252 | 253 | 1.135112 | CCTGACATGTAGCTACGTGCA | 60.135 | 52.381 | 35.42 | 30.60 | 44.88 | 4.57 |
253 | 254 | 1.920574 | CTGACATGTAGCTACGTGCAC | 59.079 | 52.381 | 35.42 | 29.40 | 44.88 | 4.57 |
263 | 264 | 6.996106 | TGTAGCTACGTGCACATTAAATAAC | 58.004 | 36.000 | 18.64 | 5.55 | 45.94 | 1.89 |
290 | 291 | 5.300792 | CCCATTAAATAAGGCCGTGTATGTT | 59.699 | 40.000 | 0.00 | 0.00 | 0.00 | 2.71 |
300 | 301 | 2.158841 | GCCGTGTATGTTTTGACGTCAT | 59.841 | 45.455 | 20.80 | 6.45 | 0.00 | 3.06 |
303 | 304 | 4.860352 | CCGTGTATGTTTTGACGTCATAGA | 59.140 | 41.667 | 20.80 | 9.70 | 0.00 | 1.98 |
315 | 316 | 5.060506 | TGACGTCATAGAATGTTTGGTTGT | 58.939 | 37.500 | 15.76 | 0.00 | 0.00 | 3.32 |
319 | 320 | 6.183360 | ACGTCATAGAATGTTTGGTTGTTTGT | 60.183 | 34.615 | 0.00 | 0.00 | 0.00 | 2.83 |
320 | 321 | 6.695278 | CGTCATAGAATGTTTGGTTGTTTGTT | 59.305 | 34.615 | 0.00 | 0.00 | 0.00 | 2.83 |
323 | 324 | 7.493971 | TCATAGAATGTTTGGTTGTTTGTTTGG | 59.506 | 33.333 | 0.00 | 0.00 | 0.00 | 3.28 |
380 | 381 | 8.246871 | TCATTCGCAAAATAATGGTGTTGATTA | 58.753 | 29.630 | 0.00 | 0.00 | 34.52 | 1.75 |
399 | 400 | 9.141400 | GTTGATTAAGAATTCTTCTAGTCACGT | 57.859 | 33.333 | 23.70 | 0.00 | 39.61 | 4.49 |
403 | 404 | 6.771188 | AAGAATTCTTCTAGTCACGTGTTG | 57.229 | 37.500 | 15.11 | 4.62 | 39.61 | 3.33 |
413 | 414 | 3.443976 | AGTCACGTGTTGGCAAATTTTC | 58.556 | 40.909 | 16.51 | 0.00 | 29.07 | 2.29 |
421 | 422 | 4.929211 | GTGTTGGCAAATTTTCATAGGTCC | 59.071 | 41.667 | 0.00 | 0.00 | 0.00 | 4.46 |
422 | 423 | 4.020662 | TGTTGGCAAATTTTCATAGGTCCC | 60.021 | 41.667 | 0.00 | 0.00 | 0.00 | 4.46 |
423 | 424 | 4.059773 | TGGCAAATTTTCATAGGTCCCT | 57.940 | 40.909 | 0.00 | 0.00 | 0.00 | 4.20 |
432 | 433 | 0.680061 | CATAGGTCCCTAGGCCGAAC | 59.320 | 60.000 | 2.05 | 0.00 | 31.45 | 3.95 |
445 | 446 | 3.706140 | CGAACTGCGGTATGGCTC | 58.294 | 61.111 | 0.00 | 0.00 | 36.03 | 4.70 |
458 | 459 | 0.465097 | ATGGCTCGGATTTGGCTCAG | 60.465 | 55.000 | 0.00 | 0.00 | 0.00 | 3.35 |
460 | 461 | 0.179034 | GGCTCGGATTTGGCTCAGAT | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
464 | 465 | 2.806818 | CTCGGATTTGGCTCAGATGATG | 59.193 | 50.000 | 0.00 | 0.00 | 0.00 | 3.07 |
479 | 480 | 6.169800 | TCAGATGATGTTTTGGACGTTATCA | 58.830 | 36.000 | 0.00 | 0.00 | 40.76 | 2.15 |
493 | 494 | 5.292589 | GGACGTTATCAACCGTGATTGTAAT | 59.707 | 40.000 | 0.00 | 0.00 | 42.03 | 1.89 |
495 | 496 | 5.870433 | ACGTTATCAACCGTGATTGTAATCA | 59.130 | 36.000 | 3.28 | 3.28 | 42.03 | 2.57 |
545 | 547 | 6.001460 | TCGAAGAAGAAAATGGTGTATGGTT | 58.999 | 36.000 | 0.00 | 0.00 | 0.00 | 3.67 |
549 | 551 | 6.758254 | AGAAGAAAATGGTGTATGGTTTTGG | 58.242 | 36.000 | 0.00 | 0.00 | 0.00 | 3.28 |
563 | 565 | 3.118261 | TGGTTTTGGTTGCTTTATTGCCA | 60.118 | 39.130 | 0.00 | 0.00 | 0.00 | 4.92 |
593 | 595 | 4.645535 | AGCACACTAGAGAAAGCAAATCA | 58.354 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
601 | 603 | 9.107177 | CACTAGAGAAAGCAAATCACTCATAAT | 57.893 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
602 | 604 | 9.107177 | ACTAGAGAAAGCAAATCACTCATAATG | 57.893 | 33.333 | 0.00 | 0.00 | 0.00 | 1.90 |
604 | 606 | 6.888632 | AGAGAAAGCAAATCACTCATAATGGT | 59.111 | 34.615 | 0.00 | 0.00 | 0.00 | 3.55 |
608 | 610 | 7.886629 | AAGCAAATCACTCATAATGGTGTAT | 57.113 | 32.000 | 0.00 | 0.00 | 35.26 | 2.29 |
609 | 611 | 7.268199 | AGCAAATCACTCATAATGGTGTATG | 57.732 | 36.000 | 0.00 | 0.00 | 35.26 | 2.39 |
610 | 612 | 6.263842 | AGCAAATCACTCATAATGGTGTATGG | 59.736 | 38.462 | 0.00 | 0.00 | 35.26 | 2.74 |
621 | 630 | 2.710377 | TGGTGTATGGTGCAGATGAAC | 58.290 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
629 | 638 | 3.831715 | GGTGCAGATGAACCAAGTAAC | 57.168 | 47.619 | 5.01 | 0.00 | 43.57 | 2.50 |
630 | 639 | 3.146066 | GGTGCAGATGAACCAAGTAACA | 58.854 | 45.455 | 5.01 | 0.00 | 43.57 | 2.41 |
631 | 640 | 3.568007 | GGTGCAGATGAACCAAGTAACAA | 59.432 | 43.478 | 5.01 | 0.00 | 43.57 | 2.83 |
632 | 641 | 4.537015 | GTGCAGATGAACCAAGTAACAAC | 58.463 | 43.478 | 0.00 | 0.00 | 0.00 | 3.32 |
633 | 642 | 3.568007 | TGCAGATGAACCAAGTAACAACC | 59.432 | 43.478 | 0.00 | 0.00 | 0.00 | 3.77 |
634 | 643 | 3.821033 | GCAGATGAACCAAGTAACAACCT | 59.179 | 43.478 | 0.00 | 0.00 | 0.00 | 3.50 |
635 | 644 | 4.278419 | GCAGATGAACCAAGTAACAACCTT | 59.722 | 41.667 | 0.00 | 0.00 | 0.00 | 3.50 |
636 | 645 | 5.562890 | GCAGATGAACCAAGTAACAACCTTC | 60.563 | 44.000 | 0.00 | 0.00 | 0.00 | 3.46 |
637 | 646 | 5.530915 | CAGATGAACCAAGTAACAACCTTCA | 59.469 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
638 | 647 | 5.765182 | AGATGAACCAAGTAACAACCTTCAG | 59.235 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
639 | 648 | 3.630312 | TGAACCAAGTAACAACCTTCAGC | 59.370 | 43.478 | 0.00 | 0.00 | 0.00 | 4.26 |
640 | 649 | 3.577805 | ACCAAGTAACAACCTTCAGCT | 57.422 | 42.857 | 0.00 | 0.00 | 0.00 | 4.24 |
641 | 650 | 3.898482 | ACCAAGTAACAACCTTCAGCTT | 58.102 | 40.909 | 0.00 | 0.00 | 0.00 | 3.74 |
642 | 651 | 4.278310 | ACCAAGTAACAACCTTCAGCTTT | 58.722 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
643 | 652 | 5.442391 | ACCAAGTAACAACCTTCAGCTTTA | 58.558 | 37.500 | 0.00 | 0.00 | 0.00 | 1.85 |
644 | 653 | 5.531287 | ACCAAGTAACAACCTTCAGCTTTAG | 59.469 | 40.000 | 0.00 | 0.00 | 0.00 | 1.85 |
645 | 654 | 5.763204 | CCAAGTAACAACCTTCAGCTTTAGA | 59.237 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
646 | 655 | 6.262273 | CCAAGTAACAACCTTCAGCTTTAGAA | 59.738 | 38.462 | 0.00 | 0.00 | 0.00 | 2.10 |
647 | 656 | 7.201785 | CCAAGTAACAACCTTCAGCTTTAGAAA | 60.202 | 37.037 | 0.00 | 0.00 | 0.00 | 2.52 |
648 | 657 | 7.497925 | AGTAACAACCTTCAGCTTTAGAAAG | 57.502 | 36.000 | 0.00 | 0.00 | 39.03 | 2.62 |
667 | 676 | 3.266510 | AGCAAATCACTCATAAGCCGA | 57.733 | 42.857 | 0.00 | 0.00 | 0.00 | 5.54 |
673 | 682 | 2.086094 | TCACTCATAAGCCGACGTACA | 58.914 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
674 | 683 | 2.686405 | TCACTCATAAGCCGACGTACAT | 59.314 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
679 | 688 | 3.129813 | TCATAAGCCGACGTACATCAACT | 59.870 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
717 | 733 | 5.221185 | GCACCACAGCAGATCAATGATTATT | 60.221 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
728 | 744 | 8.562052 | CAGATCAATGATTATTTTCATCCACGA | 58.438 | 33.333 | 0.00 | 0.00 | 35.29 | 4.35 |
733 | 752 | 2.341846 | TATTTTCATCCACGAGCCCC | 57.658 | 50.000 | 0.00 | 0.00 | 0.00 | 5.80 |
759 | 780 | 1.812235 | ACATCAAGCAGCACGAATCA | 58.188 | 45.000 | 0.00 | 0.00 | 0.00 | 2.57 |
773 | 794 | 2.930040 | ACGAATCATAAAGCTGTGGTCG | 59.070 | 45.455 | 13.91 | 13.91 | 32.12 | 4.79 |
775 | 796 | 1.290203 | ATCATAAAGCTGTGGTCGCG | 58.710 | 50.000 | 0.00 | 0.00 | 0.00 | 5.87 |
786 | 807 | 1.516386 | TGGTCGCGCGATCTTTCTC | 60.516 | 57.895 | 39.11 | 23.15 | 0.00 | 2.87 |
815 | 836 | 1.066587 | GAGCCCAACCGATCTCTCG | 59.933 | 63.158 | 0.00 | 0.00 | 44.62 | 4.04 |
902 | 939 | 1.002134 | CACTCCATTTCGCACCCCT | 60.002 | 57.895 | 0.00 | 0.00 | 0.00 | 4.79 |
941 | 981 | 5.771666 | AGAATCCAAAATCACAGCAGAAGAA | 59.228 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
983 | 1073 | 6.127619 | GGAAAGAAGAGAGAGAAAGAGGAGAG | 60.128 | 46.154 | 0.00 | 0.00 | 0.00 | 3.20 |
984 | 1074 | 5.779241 | AGAAGAGAGAGAAAGAGGAGAGA | 57.221 | 43.478 | 0.00 | 0.00 | 0.00 | 3.10 |
985 | 1075 | 5.749462 | AGAAGAGAGAGAAAGAGGAGAGAG | 58.251 | 45.833 | 0.00 | 0.00 | 0.00 | 3.20 |
986 | 1076 | 5.488919 | AGAAGAGAGAGAAAGAGGAGAGAGA | 59.511 | 44.000 | 0.00 | 0.00 | 0.00 | 3.10 |
987 | 1077 | 5.365021 | AGAGAGAGAAAGAGGAGAGAGAG | 57.635 | 47.826 | 0.00 | 0.00 | 0.00 | 3.20 |
988 | 1078 | 5.032846 | AGAGAGAGAAAGAGGAGAGAGAGA | 58.967 | 45.833 | 0.00 | 0.00 | 0.00 | 3.10 |
996 | 1090 | 5.983333 | AAGAGGAGAGAGAGAAGAGAGAT | 57.017 | 43.478 | 0.00 | 0.00 | 0.00 | 2.75 |
1050 | 1156 | 4.785453 | CCGGCCAGCCTCCTCAAC | 62.785 | 72.222 | 2.24 | 0.00 | 0.00 | 3.18 |
1120 | 1226 | 4.668118 | ACCACCGCCCGTACAACG | 62.668 | 66.667 | 0.00 | 0.00 | 42.11 | 4.10 |
1127 | 1239 | 2.744709 | CCCGTACAACGCCAAGGG | 60.745 | 66.667 | 0.00 | 0.00 | 40.91 | 3.95 |
1507 | 4678 | 2.679716 | GGGCTGACCAAGGAGCAT | 59.320 | 61.111 | 0.00 | 0.00 | 39.85 | 3.79 |
1650 | 4827 | 1.269166 | GACGCGTACAAGATGGACAG | 58.731 | 55.000 | 13.97 | 0.00 | 27.91 | 3.51 |
1755 | 4946 | 2.040813 | TCAAGGTCGAGTAGGTAGTGGT | 59.959 | 50.000 | 0.00 | 0.00 | 0.00 | 4.16 |
1758 | 4951 | 1.946081 | GGTCGAGTAGGTAGTGGTAGC | 59.054 | 57.143 | 0.00 | 0.00 | 0.00 | 3.58 |
1831 | 5034 | 3.011566 | TGTGGTCATGTTTGGTGTCTT | 57.988 | 42.857 | 0.00 | 0.00 | 0.00 | 3.01 |
1900 | 5120 | 1.134220 | GTCTGGTGGTGAAGTTGGTCA | 60.134 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
1901 | 5121 | 1.774254 | TCTGGTGGTGAAGTTGGTCAT | 59.226 | 47.619 | 0.00 | 0.00 | 0.00 | 3.06 |
1932 | 5160 | 3.855689 | AATTTCCTCAAGTTCGGCATG | 57.144 | 42.857 | 0.00 | 0.00 | 0.00 | 4.06 |
1933 | 5161 | 0.881118 | TTTCCTCAAGTTCGGCATGC | 59.119 | 50.000 | 9.90 | 9.90 | 0.00 | 4.06 |
1963 | 5191 | 2.503356 | TGCTTTGGTGGTGAAATTGGTT | 59.497 | 40.909 | 0.00 | 0.00 | 0.00 | 3.67 |
1990 | 5218 | 6.489700 | TGCAATTCTGTTGATTTCCTCAAGTA | 59.510 | 34.615 | 0.00 | 0.00 | 44.44 | 2.24 |
2112 | 5451 | 6.912591 | GTCATGAACTTTGTTGATTTTCTCGT | 59.087 | 34.615 | 0.00 | 0.00 | 0.00 | 4.18 |
2142 | 5481 | 5.412594 | GCCTGATGAACTACTTTGATTGTCA | 59.587 | 40.000 | 0.00 | 0.00 | 0.00 | 3.58 |
2181 | 5688 | 5.661056 | TTCTCGTCCTTGATCTGTATTGT | 57.339 | 39.130 | 0.00 | 0.00 | 0.00 | 2.71 |
2254 | 5783 | 0.250727 | CATGGAGTTGGTGAACGGGT | 60.251 | 55.000 | 0.00 | 0.00 | 37.15 | 5.28 |
2262 | 5791 | 3.134442 | AGTTGGTGAACGGGTAGTTACAA | 59.866 | 43.478 | 0.00 | 0.00 | 44.35 | 2.41 |
2350 | 7140 | 3.340814 | TTTGCTTGTCTGATCTCCTCC | 57.659 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
2351 | 7141 | 0.820226 | TGCTTGTCTGATCTCCTCCG | 59.180 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
2401 | 7191 | 9.724839 | TTAACTTCTTGTAACAACTGTAATTGC | 57.275 | 29.630 | 0.00 | 0.00 | 32.47 | 3.56 |
2428 | 7218 | 6.053005 | CAGTTTGTAGTTGTAGGGTTCTTGA | 58.947 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2591 | 7406 | 9.965902 | ATCAACTATACTTTGATGGAGAAGTTT | 57.034 | 29.630 | 4.64 | 0.00 | 41.24 | 2.66 |
2666 | 7493 | 3.300009 | CTTGCTGGTGAAAATTCGTCAC | 58.700 | 45.455 | 11.90 | 11.90 | 43.87 | 3.67 |
2695 | 7522 | 7.931275 | ACTTTGTTGATTTCCTCTAGTTTGAC | 58.069 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
2696 | 7523 | 7.775561 | ACTTTGTTGATTTCCTCTAGTTTGACT | 59.224 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
2697 | 7524 | 7.496529 | TTGTTGATTTCCTCTAGTTTGACTG | 57.503 | 36.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2698 | 7525 | 6.591935 | TGTTGATTTCCTCTAGTTTGACTGT | 58.408 | 36.000 | 0.00 | 0.00 | 0.00 | 3.55 |
2699 | 7526 | 7.054124 | TGTTGATTTCCTCTAGTTTGACTGTT | 58.946 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
2700 | 7527 | 7.556275 | TGTTGATTTCCTCTAGTTTGACTGTTT | 59.444 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
2701 | 7528 | 7.496529 | TGATTTCCTCTAGTTTGACTGTTTG | 57.503 | 36.000 | 0.00 | 0.00 | 0.00 | 2.93 |
2702 | 7529 | 7.279615 | TGATTTCCTCTAGTTTGACTGTTTGA | 58.720 | 34.615 | 0.00 | 0.00 | 0.00 | 2.69 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 2.039216 | TGTTCAGTCGATTTTAGGCCCA | 59.961 | 45.455 | 0.00 | 0.00 | 0.00 | 5.36 |
2 | 3 | 3.751698 | ACTTGTTCAGTCGATTTTAGGCC | 59.248 | 43.478 | 0.00 | 0.00 | 0.00 | 5.19 |
4 | 5 | 6.400727 | CCGTTACTTGTTCAGTCGATTTTAGG | 60.401 | 42.308 | 0.00 | 0.00 | 36.88 | 2.69 |
5 | 6 | 6.364165 | TCCGTTACTTGTTCAGTCGATTTTAG | 59.636 | 38.462 | 0.00 | 0.00 | 36.88 | 1.85 |
6 | 7 | 6.215121 | TCCGTTACTTGTTCAGTCGATTTTA | 58.785 | 36.000 | 0.00 | 0.00 | 36.88 | 1.52 |
7 | 8 | 5.051816 | TCCGTTACTTGTTCAGTCGATTTT | 58.948 | 37.500 | 0.00 | 0.00 | 36.88 | 1.82 |
9 | 10 | 4.235360 | CTCCGTTACTTGTTCAGTCGATT | 58.765 | 43.478 | 0.00 | 0.00 | 36.88 | 3.34 |
11 | 12 | 2.620115 | ACTCCGTTACTTGTTCAGTCGA | 59.380 | 45.455 | 0.00 | 0.00 | 36.88 | 4.20 |
12 | 13 | 2.978489 | GACTCCGTTACTTGTTCAGTCG | 59.022 | 50.000 | 0.00 | 0.00 | 36.88 | 4.18 |
13 | 14 | 3.734735 | GTGACTCCGTTACTTGTTCAGTC | 59.265 | 47.826 | 0.00 | 0.00 | 36.88 | 3.51 |
14 | 15 | 3.383825 | AGTGACTCCGTTACTTGTTCAGT | 59.616 | 43.478 | 0.00 | 0.00 | 39.87 | 3.41 |
15 | 16 | 3.978687 | AGTGACTCCGTTACTTGTTCAG | 58.021 | 45.455 | 0.00 | 0.00 | 27.82 | 3.02 |
16 | 17 | 3.549423 | CGAGTGACTCCGTTACTTGTTCA | 60.549 | 47.826 | 7.07 | 0.00 | 32.59 | 3.18 |
17 | 18 | 2.978489 | CGAGTGACTCCGTTACTTGTTC | 59.022 | 50.000 | 7.07 | 0.00 | 32.59 | 3.18 |
18 | 19 | 2.620115 | TCGAGTGACTCCGTTACTTGTT | 59.380 | 45.455 | 7.07 | 0.00 | 35.75 | 2.83 |
19 | 20 | 2.031333 | GTCGAGTGACTCCGTTACTTGT | 60.031 | 50.000 | 7.07 | 0.00 | 42.08 | 3.16 |
20 | 21 | 2.582687 | GTCGAGTGACTCCGTTACTTG | 58.417 | 52.381 | 7.07 | 1.01 | 42.08 | 3.16 |
21 | 22 | 1.538950 | GGTCGAGTGACTCCGTTACTT | 59.461 | 52.381 | 7.07 | 0.00 | 44.83 | 2.24 |
22 | 23 | 1.163554 | GGTCGAGTGACTCCGTTACT | 58.836 | 55.000 | 7.07 | 0.00 | 44.83 | 2.24 |
23 | 24 | 1.130186 | GAGGTCGAGTGACTCCGTTAC | 59.870 | 57.143 | 7.07 | 0.65 | 44.83 | 2.50 |
24 | 25 | 1.446907 | GAGGTCGAGTGACTCCGTTA | 58.553 | 55.000 | 7.07 | 0.00 | 44.83 | 3.18 |
25 | 26 | 1.242665 | GGAGGTCGAGTGACTCCGTT | 61.243 | 60.000 | 7.07 | 0.00 | 44.83 | 4.44 |
26 | 27 | 1.674980 | GGAGGTCGAGTGACTCCGT | 60.675 | 63.158 | 7.07 | 0.00 | 44.83 | 4.69 |
27 | 28 | 0.107800 | TAGGAGGTCGAGTGACTCCG | 60.108 | 60.000 | 7.07 | 2.65 | 44.83 | 4.63 |
28 | 29 | 1.339824 | TGTAGGAGGTCGAGTGACTCC | 60.340 | 57.143 | 7.07 | 14.35 | 44.83 | 3.85 |
29 | 30 | 1.738908 | GTGTAGGAGGTCGAGTGACTC | 59.261 | 57.143 | 1.65 | 1.65 | 44.83 | 3.36 |
30 | 31 | 1.073444 | TGTGTAGGAGGTCGAGTGACT | 59.927 | 52.381 | 0.00 | 0.00 | 44.83 | 3.41 |
31 | 32 | 1.199558 | GTGTGTAGGAGGTCGAGTGAC | 59.800 | 57.143 | 0.00 | 0.00 | 44.72 | 3.67 |
32 | 33 | 1.531423 | GTGTGTAGGAGGTCGAGTGA | 58.469 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
33 | 34 | 0.526662 | GGTGTGTAGGAGGTCGAGTG | 59.473 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
34 | 35 | 0.404812 | AGGTGTGTAGGAGGTCGAGT | 59.595 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
35 | 36 | 2.015587 | GTAGGTGTGTAGGAGGTCGAG | 58.984 | 57.143 | 0.00 | 0.00 | 0.00 | 4.04 |
36 | 37 | 1.632409 | AGTAGGTGTGTAGGAGGTCGA | 59.368 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
37 | 38 | 2.015587 | GAGTAGGTGTGTAGGAGGTCG | 58.984 | 57.143 | 0.00 | 0.00 | 0.00 | 4.79 |
38 | 39 | 3.054213 | AGAGAGTAGGTGTGTAGGAGGTC | 60.054 | 52.174 | 0.00 | 0.00 | 0.00 | 3.85 |
39 | 40 | 2.920941 | AGAGAGTAGGTGTGTAGGAGGT | 59.079 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
40 | 41 | 3.655615 | AGAGAGTAGGTGTGTAGGAGG | 57.344 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
41 | 42 | 4.121317 | CGTAGAGAGTAGGTGTGTAGGAG | 58.879 | 52.174 | 0.00 | 0.00 | 0.00 | 3.69 |
42 | 43 | 3.517100 | ACGTAGAGAGTAGGTGTGTAGGA | 59.483 | 47.826 | 0.00 | 0.00 | 0.00 | 2.94 |
43 | 44 | 3.870419 | GACGTAGAGAGTAGGTGTGTAGG | 59.130 | 52.174 | 0.00 | 0.00 | 0.00 | 3.18 |
44 | 45 | 3.870419 | GGACGTAGAGAGTAGGTGTGTAG | 59.130 | 52.174 | 0.00 | 0.00 | 0.00 | 2.74 |
45 | 46 | 3.677148 | CGGACGTAGAGAGTAGGTGTGTA | 60.677 | 52.174 | 0.00 | 0.00 | 0.00 | 2.90 |
46 | 47 | 2.709213 | GGACGTAGAGAGTAGGTGTGT | 58.291 | 52.381 | 0.00 | 0.00 | 0.00 | 3.72 |
47 | 48 | 1.664659 | CGGACGTAGAGAGTAGGTGTG | 59.335 | 57.143 | 0.00 | 0.00 | 0.00 | 3.82 |
48 | 49 | 1.552337 | TCGGACGTAGAGAGTAGGTGT | 59.448 | 52.381 | 0.00 | 0.00 | 0.00 | 4.16 |
49 | 50 | 2.306341 | TCGGACGTAGAGAGTAGGTG | 57.694 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
50 | 51 | 3.340814 | TTTCGGACGTAGAGAGTAGGT | 57.659 | 47.619 | 0.00 | 0.00 | 0.00 | 3.08 |
51 | 52 | 4.897025 | ATTTTCGGACGTAGAGAGTAGG | 57.103 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
52 | 53 | 6.601741 | AGTATTTTCGGACGTAGAGAGTAG | 57.398 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
53 | 54 | 6.992063 | AAGTATTTTCGGACGTAGAGAGTA | 57.008 | 37.500 | 0.00 | 0.00 | 0.00 | 2.59 |
54 | 55 | 5.893897 | AAGTATTTTCGGACGTAGAGAGT | 57.106 | 39.130 | 0.00 | 0.00 | 0.00 | 3.24 |
55 | 56 | 7.863666 | AGATAAGTATTTTCGGACGTAGAGAG | 58.136 | 38.462 | 0.00 | 0.00 | 31.01 | 3.20 |
56 | 57 | 7.798596 | AGATAAGTATTTTCGGACGTAGAGA | 57.201 | 36.000 | 0.00 | 0.00 | 31.01 | 3.10 |
57 | 58 | 9.941664 | TTAAGATAAGTATTTTCGGACGTAGAG | 57.058 | 33.333 | 0.00 | 0.00 | 31.01 | 2.43 |
119 | 120 | 9.226606 | TGTTCTAGAAATGAATAAAACGGATGT | 57.773 | 29.630 | 6.78 | 0.00 | 0.00 | 3.06 |
122 | 123 | 9.280174 | ACTTGTTCTAGAAATGAATAAAACGGA | 57.720 | 29.630 | 6.78 | 0.00 | 0.00 | 4.69 |
131 | 132 | 9.496873 | TCCGAAAATACTTGTTCTAGAAATGAA | 57.503 | 29.630 | 6.78 | 0.00 | 0.00 | 2.57 |
132 | 133 | 8.932791 | GTCCGAAAATACTTGTTCTAGAAATGA | 58.067 | 33.333 | 6.78 | 0.00 | 0.00 | 2.57 |
133 | 134 | 7.898309 | CGTCCGAAAATACTTGTTCTAGAAATG | 59.102 | 37.037 | 6.78 | 3.11 | 0.00 | 2.32 |
134 | 135 | 7.064253 | CCGTCCGAAAATACTTGTTCTAGAAAT | 59.936 | 37.037 | 6.78 | 0.00 | 0.00 | 2.17 |
135 | 136 | 6.366877 | CCGTCCGAAAATACTTGTTCTAGAAA | 59.633 | 38.462 | 6.78 | 0.00 | 0.00 | 2.52 |
136 | 137 | 5.865552 | CCGTCCGAAAATACTTGTTCTAGAA | 59.134 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
137 | 138 | 5.183713 | TCCGTCCGAAAATACTTGTTCTAGA | 59.816 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
138 | 139 | 5.404946 | TCCGTCCGAAAATACTTGTTCTAG | 58.595 | 41.667 | 0.00 | 0.00 | 0.00 | 2.43 |
139 | 140 | 5.183713 | TCTCCGTCCGAAAATACTTGTTCTA | 59.816 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
140 | 141 | 4.021719 | TCTCCGTCCGAAAATACTTGTTCT | 60.022 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
141 | 142 | 4.240096 | TCTCCGTCCGAAAATACTTGTTC | 58.760 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
142 | 143 | 4.261578 | TCTCCGTCCGAAAATACTTGTT | 57.738 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
143 | 144 | 3.947910 | TCTCCGTCCGAAAATACTTGT | 57.052 | 42.857 | 0.00 | 0.00 | 0.00 | 3.16 |
144 | 145 | 3.617263 | CCTTCTCCGTCCGAAAATACTTG | 59.383 | 47.826 | 0.00 | 0.00 | 0.00 | 3.16 |
145 | 146 | 3.260128 | ACCTTCTCCGTCCGAAAATACTT | 59.740 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
146 | 147 | 2.830321 | ACCTTCTCCGTCCGAAAATACT | 59.170 | 45.455 | 0.00 | 0.00 | 0.00 | 2.12 |
147 | 148 | 3.242549 | ACCTTCTCCGTCCGAAAATAC | 57.757 | 47.619 | 0.00 | 0.00 | 0.00 | 1.89 |
148 | 149 | 4.646040 | TGATACCTTCTCCGTCCGAAAATA | 59.354 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
149 | 150 | 3.449737 | TGATACCTTCTCCGTCCGAAAAT | 59.550 | 43.478 | 0.00 | 0.00 | 0.00 | 1.82 |
150 | 151 | 2.827322 | TGATACCTTCTCCGTCCGAAAA | 59.173 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
151 | 152 | 2.165030 | GTGATACCTTCTCCGTCCGAAA | 59.835 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
152 | 153 | 1.747355 | GTGATACCTTCTCCGTCCGAA | 59.253 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
153 | 154 | 1.340308 | TGTGATACCTTCTCCGTCCGA | 60.340 | 52.381 | 0.00 | 0.00 | 0.00 | 4.55 |
154 | 155 | 1.100510 | TGTGATACCTTCTCCGTCCG | 58.899 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
155 | 156 | 4.931661 | TTATGTGATACCTTCTCCGTCC | 57.068 | 45.455 | 0.00 | 0.00 | 0.00 | 4.79 |
156 | 157 | 5.903810 | ACTTTATGTGATACCTTCTCCGTC | 58.096 | 41.667 | 0.00 | 0.00 | 0.00 | 4.79 |
157 | 158 | 5.934402 | ACTTTATGTGATACCTTCTCCGT | 57.066 | 39.130 | 0.00 | 0.00 | 0.00 | 4.69 |
158 | 159 | 6.040616 | AGGTACTTTATGTGATACCTTCTCCG | 59.959 | 42.308 | 0.00 | 0.00 | 44.03 | 4.63 |
159 | 160 | 7.362802 | AGGTACTTTATGTGATACCTTCTCC | 57.637 | 40.000 | 0.00 | 0.00 | 44.03 | 3.71 |
178 | 179 | 3.071479 | TCTTGCCGTTGATTCAAGGTAC | 58.929 | 45.455 | 15.70 | 9.39 | 38.13 | 3.34 |
179 | 180 | 3.410631 | TCTTGCCGTTGATTCAAGGTA | 57.589 | 42.857 | 15.70 | 9.11 | 38.13 | 3.08 |
180 | 181 | 2.270352 | TCTTGCCGTTGATTCAAGGT | 57.730 | 45.000 | 15.70 | 0.00 | 38.13 | 3.50 |
181 | 182 | 3.641437 | TTTCTTGCCGTTGATTCAAGG | 57.359 | 42.857 | 11.28 | 11.28 | 38.13 | 3.61 |
182 | 183 | 5.691305 | TCAATTTTCTTGCCGTTGATTCAAG | 59.309 | 36.000 | 0.00 | 0.00 | 38.73 | 3.02 |
183 | 184 | 5.461737 | GTCAATTTTCTTGCCGTTGATTCAA | 59.538 | 36.000 | 0.00 | 0.00 | 32.19 | 2.69 |
184 | 185 | 4.981674 | GTCAATTTTCTTGCCGTTGATTCA | 59.018 | 37.500 | 0.00 | 0.00 | 32.19 | 2.57 |
185 | 186 | 4.385748 | GGTCAATTTTCTTGCCGTTGATTC | 59.614 | 41.667 | 0.00 | 0.00 | 32.19 | 2.52 |
186 | 187 | 4.306600 | GGTCAATTTTCTTGCCGTTGATT | 58.693 | 39.130 | 0.00 | 0.00 | 32.19 | 2.57 |
187 | 188 | 3.611530 | CGGTCAATTTTCTTGCCGTTGAT | 60.612 | 43.478 | 10.55 | 0.00 | 35.74 | 2.57 |
188 | 189 | 2.287308 | CGGTCAATTTTCTTGCCGTTGA | 60.287 | 45.455 | 10.55 | 0.00 | 35.74 | 3.18 |
189 | 190 | 2.050691 | CGGTCAATTTTCTTGCCGTTG | 58.949 | 47.619 | 10.55 | 0.00 | 35.74 | 4.10 |
190 | 191 | 1.950909 | TCGGTCAATTTTCTTGCCGTT | 59.049 | 42.857 | 15.28 | 0.00 | 38.89 | 4.44 |
191 | 192 | 1.600023 | TCGGTCAATTTTCTTGCCGT | 58.400 | 45.000 | 15.28 | 0.00 | 38.89 | 5.68 |
192 | 193 | 2.785679 | GATCGGTCAATTTTCTTGCCG | 58.214 | 47.619 | 11.80 | 11.80 | 39.04 | 5.69 |
193 | 194 | 2.418628 | TCGATCGGTCAATTTTCTTGCC | 59.581 | 45.455 | 16.41 | 0.00 | 0.00 | 4.52 |
194 | 195 | 3.740044 | TCGATCGGTCAATTTTCTTGC | 57.260 | 42.857 | 16.41 | 0.00 | 0.00 | 4.01 |
195 | 196 | 7.630026 | TCATATTCGATCGGTCAATTTTCTTG | 58.370 | 34.615 | 16.41 | 2.83 | 0.00 | 3.02 |
196 | 197 | 7.786178 | TCATATTCGATCGGTCAATTTTCTT | 57.214 | 32.000 | 16.41 | 0.00 | 0.00 | 2.52 |
197 | 198 | 7.786178 | TTCATATTCGATCGGTCAATTTTCT | 57.214 | 32.000 | 16.41 | 0.00 | 0.00 | 2.52 |
198 | 199 | 8.835467 | TTTTCATATTCGATCGGTCAATTTTC | 57.165 | 30.769 | 16.41 | 0.00 | 0.00 | 2.29 |
199 | 200 | 9.450807 | GATTTTCATATTCGATCGGTCAATTTT | 57.549 | 29.630 | 16.41 | 0.00 | 0.00 | 1.82 |
200 | 201 | 8.076178 | GGATTTTCATATTCGATCGGTCAATTT | 58.924 | 33.333 | 16.41 | 0.32 | 0.00 | 1.82 |
201 | 202 | 7.228507 | TGGATTTTCATATTCGATCGGTCAATT | 59.771 | 33.333 | 16.41 | 0.00 | 0.00 | 2.32 |
202 | 203 | 6.710295 | TGGATTTTCATATTCGATCGGTCAAT | 59.290 | 34.615 | 16.41 | 10.34 | 0.00 | 2.57 |
203 | 204 | 6.052360 | TGGATTTTCATATTCGATCGGTCAA | 58.948 | 36.000 | 16.41 | 2.33 | 0.00 | 3.18 |
204 | 205 | 5.606505 | TGGATTTTCATATTCGATCGGTCA | 58.393 | 37.500 | 16.41 | 0.00 | 0.00 | 4.02 |
205 | 206 | 5.696724 | ACTGGATTTTCATATTCGATCGGTC | 59.303 | 40.000 | 16.41 | 0.00 | 0.00 | 4.79 |
206 | 207 | 5.611374 | ACTGGATTTTCATATTCGATCGGT | 58.389 | 37.500 | 16.41 | 7.22 | 0.00 | 4.69 |
207 | 208 | 5.164051 | CGACTGGATTTTCATATTCGATCGG | 60.164 | 44.000 | 16.41 | 0.00 | 0.00 | 4.18 |
208 | 209 | 5.666427 | GCGACTGGATTTTCATATTCGATCG | 60.666 | 44.000 | 9.36 | 9.36 | 0.00 | 3.69 |
209 | 210 | 5.389935 | GGCGACTGGATTTTCATATTCGATC | 60.390 | 44.000 | 0.00 | 0.00 | 0.00 | 3.69 |
210 | 211 | 4.452455 | GGCGACTGGATTTTCATATTCGAT | 59.548 | 41.667 | 0.00 | 0.00 | 0.00 | 3.59 |
211 | 212 | 3.807622 | GGCGACTGGATTTTCATATTCGA | 59.192 | 43.478 | 0.00 | 0.00 | 0.00 | 3.71 |
212 | 213 | 3.809832 | AGGCGACTGGATTTTCATATTCG | 59.190 | 43.478 | 0.00 | 0.00 | 41.13 | 3.34 |
227 | 228 | 1.405821 | GTAGCTACATGTCAGGCGACT | 59.594 | 52.381 | 19.15 | 0.00 | 43.06 | 4.18 |
228 | 229 | 1.841450 | GTAGCTACATGTCAGGCGAC | 58.159 | 55.000 | 19.15 | 8.59 | 42.93 | 5.19 |
229 | 230 | 0.380733 | CGTAGCTACATGTCAGGCGA | 59.619 | 55.000 | 23.21 | 0.00 | 0.00 | 5.54 |
230 | 231 | 0.100682 | ACGTAGCTACATGTCAGGCG | 59.899 | 55.000 | 23.21 | 8.69 | 0.00 | 5.52 |
231 | 232 | 1.560923 | CACGTAGCTACATGTCAGGC | 58.439 | 55.000 | 23.21 | 5.92 | 0.00 | 4.85 |
232 | 233 | 1.135112 | TGCACGTAGCTACATGTCAGG | 60.135 | 52.381 | 23.21 | 7.80 | 45.94 | 3.86 |
233 | 234 | 1.920574 | GTGCACGTAGCTACATGTCAG | 59.079 | 52.381 | 23.21 | 8.50 | 45.94 | 3.51 |
234 | 235 | 1.271102 | TGTGCACGTAGCTACATGTCA | 59.729 | 47.619 | 23.21 | 16.60 | 45.94 | 3.58 |
235 | 236 | 1.990799 | TGTGCACGTAGCTACATGTC | 58.009 | 50.000 | 23.21 | 14.40 | 45.94 | 3.06 |
236 | 237 | 2.672961 | ATGTGCACGTAGCTACATGT | 57.327 | 45.000 | 23.21 | 11.27 | 45.94 | 3.21 |
237 | 238 | 5.463499 | TTTAATGTGCACGTAGCTACATG | 57.537 | 39.130 | 23.21 | 19.46 | 45.94 | 3.21 |
238 | 239 | 7.279090 | TGTTATTTAATGTGCACGTAGCTACAT | 59.721 | 33.333 | 23.21 | 5.52 | 45.94 | 2.29 |
239 | 240 | 6.590677 | TGTTATTTAATGTGCACGTAGCTACA | 59.409 | 34.615 | 23.21 | 5.93 | 45.94 | 2.74 |
240 | 241 | 6.996106 | TGTTATTTAATGTGCACGTAGCTAC | 58.004 | 36.000 | 12.96 | 14.19 | 45.94 | 3.58 |
241 | 242 | 6.237996 | GCTGTTATTTAATGTGCACGTAGCTA | 60.238 | 38.462 | 12.96 | 0.00 | 45.94 | 3.32 |
242 | 243 | 5.447279 | GCTGTTATTTAATGTGCACGTAGCT | 60.447 | 40.000 | 12.96 | 0.00 | 45.94 | 3.32 |
243 | 244 | 4.728608 | GCTGTTATTTAATGTGCACGTAGC | 59.271 | 41.667 | 12.96 | 11.01 | 45.96 | 3.58 |
244 | 245 | 5.263185 | GGCTGTTATTTAATGTGCACGTAG | 58.737 | 41.667 | 12.96 | 4.41 | 0.00 | 3.51 |
245 | 246 | 4.095185 | GGGCTGTTATTTAATGTGCACGTA | 59.905 | 41.667 | 12.96 | 3.79 | 0.00 | 3.57 |
246 | 247 | 3.119637 | GGGCTGTTATTTAATGTGCACGT | 60.120 | 43.478 | 13.13 | 9.52 | 0.00 | 4.49 |
247 | 248 | 3.119673 | TGGGCTGTTATTTAATGTGCACG | 60.120 | 43.478 | 13.13 | 0.00 | 0.00 | 5.34 |
248 | 249 | 4.448537 | TGGGCTGTTATTTAATGTGCAC | 57.551 | 40.909 | 10.75 | 10.75 | 0.00 | 4.57 |
249 | 250 | 5.674052 | AATGGGCTGTTATTTAATGTGCA | 57.326 | 34.783 | 0.00 | 0.00 | 0.00 | 4.57 |
250 | 251 | 8.661352 | ATTTAATGGGCTGTTATTTAATGTGC | 57.339 | 30.769 | 0.00 | 0.00 | 0.00 | 4.57 |
278 | 279 | 0.869730 | ACGTCAAAACATACACGGCC | 59.130 | 50.000 | 0.00 | 0.00 | 36.56 | 6.13 |
282 | 283 | 7.739295 | ACATTCTATGACGTCAAAACATACAC | 58.261 | 34.615 | 24.13 | 0.00 | 0.00 | 2.90 |
290 | 291 | 6.038825 | ACAACCAAACATTCTATGACGTCAAA | 59.961 | 34.615 | 24.13 | 13.13 | 0.00 | 2.69 |
300 | 301 | 6.936279 | TCCAAACAAACAACCAAACATTCTA | 58.064 | 32.000 | 0.00 | 0.00 | 0.00 | 2.10 |
303 | 304 | 7.459795 | AAATCCAAACAAACAACCAAACATT | 57.540 | 28.000 | 0.00 | 0.00 | 0.00 | 2.71 |
315 | 316 | 7.819415 | TGTACACATTGTGAAAATCCAAACAAA | 59.181 | 29.630 | 23.12 | 0.00 | 36.23 | 2.83 |
319 | 320 | 8.824781 | CAAATGTACACATTGTGAAAATCCAAA | 58.175 | 29.630 | 23.12 | 0.00 | 45.06 | 3.28 |
320 | 321 | 7.984050 | ACAAATGTACACATTGTGAAAATCCAA | 59.016 | 29.630 | 23.12 | 0.91 | 45.06 | 3.53 |
323 | 324 | 8.572828 | TGACAAATGTACACATTGTGAAAATC | 57.427 | 30.769 | 25.40 | 14.46 | 45.06 | 2.17 |
356 | 357 | 8.994429 | TTAATCAACACCATTATTTTGCGAAT | 57.006 | 26.923 | 0.00 | 0.00 | 0.00 | 3.34 |
399 | 400 | 4.020662 | GGGACCTATGAAAATTTGCCAACA | 60.021 | 41.667 | 0.00 | 0.00 | 0.00 | 3.33 |
403 | 404 | 4.584743 | CCTAGGGACCTATGAAAATTTGCC | 59.415 | 45.833 | 0.00 | 0.00 | 0.00 | 4.52 |
413 | 414 | 0.680061 | GTTCGGCCTAGGGACCTATG | 59.320 | 60.000 | 11.72 | 0.00 | 0.00 | 2.23 |
432 | 433 | 0.532862 | AAATCCGAGCCATACCGCAG | 60.533 | 55.000 | 0.00 | 0.00 | 0.00 | 5.18 |
445 | 446 | 2.569059 | ACATCATCTGAGCCAAATCCG | 58.431 | 47.619 | 0.00 | 0.00 | 0.00 | 4.18 |
458 | 459 | 6.027749 | GGTTGATAACGTCCAAAACATCATC | 58.972 | 40.000 | 0.00 | 0.00 | 0.00 | 2.92 |
460 | 461 | 4.083749 | CGGTTGATAACGTCCAAAACATCA | 60.084 | 41.667 | 0.00 | 0.00 | 0.00 | 3.07 |
464 | 465 | 3.248125 | TCACGGTTGATAACGTCCAAAAC | 59.752 | 43.478 | 0.00 | 0.00 | 42.04 | 2.43 |
522 | 523 | 5.880054 | ACCATACACCATTTTCTTCTTCG | 57.120 | 39.130 | 0.00 | 0.00 | 0.00 | 3.79 |
529 | 530 | 5.049749 | GCAACCAAAACCATACACCATTTTC | 60.050 | 40.000 | 0.00 | 0.00 | 0.00 | 2.29 |
540 | 541 | 4.071423 | GGCAATAAAGCAACCAAAACCAT | 58.929 | 39.130 | 0.00 | 0.00 | 35.83 | 3.55 |
563 | 565 | 0.671781 | CTCTAGTGTGCTTGCCGCTT | 60.672 | 55.000 | 0.00 | 0.00 | 40.11 | 4.68 |
593 | 595 | 4.164030 | TCTGCACCATACACCATTATGAGT | 59.836 | 41.667 | 0.00 | 0.00 | 31.96 | 3.41 |
601 | 603 | 2.617788 | GGTTCATCTGCACCATACACCA | 60.618 | 50.000 | 0.00 | 0.00 | 31.44 | 4.17 |
602 | 604 | 2.017049 | GGTTCATCTGCACCATACACC | 58.983 | 52.381 | 0.00 | 0.00 | 31.44 | 4.16 |
604 | 606 | 3.244875 | ACTTGGTTCATCTGCACCATACA | 60.245 | 43.478 | 2.53 | 0.00 | 40.82 | 2.29 |
608 | 610 | 3.146066 | GTTACTTGGTTCATCTGCACCA | 58.854 | 45.455 | 0.00 | 0.00 | 39.51 | 4.17 |
609 | 611 | 3.146066 | TGTTACTTGGTTCATCTGCACC | 58.854 | 45.455 | 0.00 | 0.00 | 31.76 | 5.01 |
610 | 612 | 4.537015 | GTTGTTACTTGGTTCATCTGCAC | 58.463 | 43.478 | 0.00 | 0.00 | 0.00 | 4.57 |
621 | 630 | 4.918810 | AAAGCTGAAGGTTGTTACTTGG | 57.081 | 40.909 | 0.00 | 0.00 | 35.72 | 3.61 |
623 | 632 | 7.875327 | TTTCTAAAGCTGAAGGTTGTTACTT | 57.125 | 32.000 | 0.00 | 0.00 | 35.72 | 2.24 |
624 | 633 | 7.497925 | CTTTCTAAAGCTGAAGGTTGTTACT | 57.502 | 36.000 | 0.00 | 0.00 | 35.72 | 2.24 |
639 | 648 | 7.699812 | GGCTTATGAGTGATTTGCTTTCTAAAG | 59.300 | 37.037 | 0.00 | 0.00 | 39.03 | 1.85 |
640 | 649 | 7.538575 | GGCTTATGAGTGATTTGCTTTCTAAA | 58.461 | 34.615 | 0.00 | 0.00 | 0.00 | 1.85 |
641 | 650 | 6.183360 | CGGCTTATGAGTGATTTGCTTTCTAA | 60.183 | 38.462 | 0.00 | 0.00 | 0.00 | 2.10 |
642 | 651 | 5.294306 | CGGCTTATGAGTGATTTGCTTTCTA | 59.706 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
643 | 652 | 4.095483 | CGGCTTATGAGTGATTTGCTTTCT | 59.905 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
644 | 653 | 4.094887 | TCGGCTTATGAGTGATTTGCTTTC | 59.905 | 41.667 | 0.00 | 0.00 | 0.00 | 2.62 |
645 | 654 | 4.009675 | TCGGCTTATGAGTGATTTGCTTT | 58.990 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
646 | 655 | 3.375299 | GTCGGCTTATGAGTGATTTGCTT | 59.625 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
647 | 656 | 2.939103 | GTCGGCTTATGAGTGATTTGCT | 59.061 | 45.455 | 0.00 | 0.00 | 0.00 | 3.91 |
648 | 657 | 2.285834 | CGTCGGCTTATGAGTGATTTGC | 60.286 | 50.000 | 0.00 | 0.00 | 0.00 | 3.68 |
649 | 658 | 2.930040 | ACGTCGGCTTATGAGTGATTTG | 59.070 | 45.455 | 0.00 | 0.00 | 0.00 | 2.32 |
650 | 659 | 3.247006 | ACGTCGGCTTATGAGTGATTT | 57.753 | 42.857 | 0.00 | 0.00 | 0.00 | 2.17 |
651 | 660 | 2.961526 | ACGTCGGCTTATGAGTGATT | 57.038 | 45.000 | 0.00 | 0.00 | 0.00 | 2.57 |
652 | 661 | 2.686405 | TGTACGTCGGCTTATGAGTGAT | 59.314 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
653 | 662 | 2.086094 | TGTACGTCGGCTTATGAGTGA | 58.914 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
654 | 663 | 2.554806 | TGTACGTCGGCTTATGAGTG | 57.445 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
655 | 664 | 2.686405 | TGATGTACGTCGGCTTATGAGT | 59.314 | 45.455 | 10.44 | 0.00 | 0.00 | 3.41 |
667 | 676 | 3.006967 | AGGCAAGAGAAGTTGATGTACGT | 59.993 | 43.478 | 0.00 | 0.00 | 0.00 | 3.57 |
673 | 682 | 1.808945 | CGCAAGGCAAGAGAAGTTGAT | 59.191 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
674 | 683 | 1.229428 | CGCAAGGCAAGAGAAGTTGA | 58.771 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
717 | 733 | 1.622607 | ATCGGGGCTCGTGGATGAAA | 61.623 | 55.000 | 6.68 | 0.00 | 40.32 | 2.69 |
728 | 744 | 0.389391 | CTTGATGTACGATCGGGGCT | 59.611 | 55.000 | 20.98 | 0.00 | 0.00 | 5.19 |
733 | 752 | 1.256376 | GTGCTGCTTGATGTACGATCG | 59.744 | 52.381 | 14.88 | 14.88 | 0.00 | 3.69 |
759 | 780 | 2.452813 | CGCGCGACCACAGCTTTAT | 61.453 | 57.895 | 28.94 | 0.00 | 0.00 | 1.40 |
773 | 794 | 1.920762 | CCTTCGAGAAAGATCGCGC | 59.079 | 57.895 | 0.00 | 0.00 | 46.68 | 6.86 |
775 | 796 | 1.204792 | GAGCCTTCGAGAAAGATCGC | 58.795 | 55.000 | 0.00 | 0.00 | 42.43 | 4.58 |
815 | 836 | 4.384318 | GGGAGATGGGTTTAGAAGGTTCTC | 60.384 | 50.000 | 0.00 | 0.00 | 38.70 | 2.87 |
902 | 939 | 2.612972 | GGATTCTTGTGGTGAGCGAGAA | 60.613 | 50.000 | 0.00 | 0.00 | 39.74 | 2.87 |
941 | 981 | 4.540099 | TCTTTCCCTCTCTCTCTCTCTCTT | 59.460 | 45.833 | 0.00 | 0.00 | 0.00 | 2.85 |
983 | 1073 | 4.151883 | AGCCATGGTATCTCTCTTCTCTC | 58.848 | 47.826 | 14.67 | 0.00 | 0.00 | 3.20 |
984 | 1074 | 4.197559 | AGCCATGGTATCTCTCTTCTCT | 57.802 | 45.455 | 14.67 | 0.00 | 0.00 | 3.10 |
985 | 1075 | 4.262420 | GGAAGCCATGGTATCTCTCTTCTC | 60.262 | 50.000 | 14.67 | 6.26 | 31.77 | 2.87 |
986 | 1076 | 3.645687 | GGAAGCCATGGTATCTCTCTTCT | 59.354 | 47.826 | 14.67 | 0.00 | 31.77 | 2.85 |
987 | 1077 | 3.553922 | CGGAAGCCATGGTATCTCTCTTC | 60.554 | 52.174 | 14.67 | 14.45 | 0.00 | 2.87 |
988 | 1078 | 2.366916 | CGGAAGCCATGGTATCTCTCTT | 59.633 | 50.000 | 14.67 | 5.90 | 0.00 | 2.85 |
1127 | 1239 | 3.019003 | TAGCGGCTGACCTCCTTGC | 62.019 | 63.158 | 13.86 | 0.00 | 0.00 | 4.01 |
1175 | 1293 | 1.078143 | AAGAAGCTGGGGATGACGC | 60.078 | 57.895 | 0.00 | 0.00 | 0.00 | 5.19 |
1221 | 1344 | 2.506881 | CGCAAAGAAATGGCGGCC | 60.507 | 61.111 | 13.32 | 13.32 | 46.46 | 6.13 |
1228 | 1361 | 4.035208 | ACTTCAGAACGAACGCAAAGAAAT | 59.965 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
1650 | 4827 | 1.414181 | TCTTCATCTCGGCCTTGATCC | 59.586 | 52.381 | 0.00 | 0.00 | 0.00 | 3.36 |
1755 | 4946 | 1.032794 | CTCCATGAGCACTACCGCTA | 58.967 | 55.000 | 0.00 | 0.00 | 44.01 | 4.26 |
1758 | 4951 | 0.179100 | CACCTCCATGAGCACTACCG | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1831 | 5034 | 4.712122 | ACGAAGCAAAACAAGGAAGAAA | 57.288 | 36.364 | 0.00 | 0.00 | 0.00 | 2.52 |
1900 | 5120 | 9.225436 | GAACTTGAGGAAATTAAGAGAGTTCAT | 57.775 | 33.333 | 0.00 | 0.00 | 39.88 | 2.57 |
1901 | 5121 | 7.385205 | CGAACTTGAGGAAATTAAGAGAGTTCA | 59.615 | 37.037 | 11.47 | 0.00 | 40.03 | 3.18 |
1932 | 5160 | 1.666888 | CCACCAAAGCAAGTTCATCGC | 60.667 | 52.381 | 0.00 | 0.00 | 0.00 | 4.58 |
1933 | 5161 | 1.608590 | ACCACCAAAGCAAGTTCATCG | 59.391 | 47.619 | 0.00 | 0.00 | 0.00 | 3.84 |
1963 | 5191 | 7.177216 | ACTTGAGGAAATCAACAGAATTGCATA | 59.823 | 33.333 | 0.00 | 0.00 | 43.09 | 3.14 |
1990 | 5218 | 5.836898 | ACCAAATCAGTTCATCATATGCCAT | 59.163 | 36.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2112 | 5451 | 3.788227 | AGTAGTTCATCAGGCCAAACA | 57.212 | 42.857 | 5.01 | 0.00 | 0.00 | 2.83 |
2142 | 5481 | 6.987404 | GGACGAGAAAAGATAGAAAGGCTTAT | 59.013 | 38.462 | 0.00 | 0.00 | 0.00 | 1.73 |
2254 | 5783 | 9.462174 | CAAGCAAAAATCATCAACTTGTAACTA | 57.538 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
2262 | 5791 | 4.952460 | ACAGCAAGCAAAAATCATCAACT | 58.048 | 34.783 | 0.00 | 0.00 | 0.00 | 3.16 |
2350 | 7140 | 5.106555 | ACTCAAGGATAAGCACACAAAATCG | 60.107 | 40.000 | 0.00 | 0.00 | 0.00 | 3.34 |
2351 | 7141 | 6.259550 | ACTCAAGGATAAGCACACAAAATC | 57.740 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
2401 | 7191 | 4.618920 | ACCCTACAACTACAAACTGGAG | 57.381 | 45.455 | 0.00 | 0.00 | 33.50 | 3.86 |
2591 | 7406 | 5.186992 | TGGAAAATCGACAGAGTTCAGGATA | 59.813 | 40.000 | 0.00 | 0.00 | 33.08 | 2.59 |
2645 | 7472 | 3.003689 | AGTGACGAATTTTCACCAGCAAG | 59.996 | 43.478 | 14.44 | 0.00 | 43.85 | 4.01 |
2695 | 7522 | 4.778534 | ATCAGTTCATTGCCTCAAACAG | 57.221 | 40.909 | 0.00 | 0.00 | 0.00 | 3.16 |
2696 | 7523 | 5.291178 | CAAATCAGTTCATTGCCTCAAACA | 58.709 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
2697 | 7524 | 4.687483 | CCAAATCAGTTCATTGCCTCAAAC | 59.313 | 41.667 | 0.00 | 0.00 | 0.00 | 2.93 |
2698 | 7525 | 4.344679 | ACCAAATCAGTTCATTGCCTCAAA | 59.655 | 37.500 | 0.00 | 0.00 | 0.00 | 2.69 |
2699 | 7526 | 3.896888 | ACCAAATCAGTTCATTGCCTCAA | 59.103 | 39.130 | 0.00 | 0.00 | 0.00 | 3.02 |
2700 | 7527 | 3.499338 | ACCAAATCAGTTCATTGCCTCA | 58.501 | 40.909 | 0.00 | 0.00 | 0.00 | 3.86 |
2701 | 7528 | 4.702131 | ACTACCAAATCAGTTCATTGCCTC | 59.298 | 41.667 | 0.00 | 0.00 | 0.00 | 4.70 |
2702 | 7529 | 4.460382 | CACTACCAAATCAGTTCATTGCCT | 59.540 | 41.667 | 0.00 | 0.00 | 0.00 | 4.75 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.