Multiple sequence alignment - TraesCS7D01G179100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G179100 chr7D 100.000 3179 0 0 1 3179 132156097 132159275 0.000000e+00 5871.0
1 TraesCS7D01G179100 chr7D 88.470 1353 89 27 900 2209 132764679 132763351 0.000000e+00 1572.0
2 TraesCS7D01G179100 chr7D 88.494 1321 97 17 900 2188 194129262 194130559 0.000000e+00 1546.0
3 TraesCS7D01G179100 chr7D 86.717 1325 86 37 900 2169 132135516 132136805 0.000000e+00 1389.0
4 TraesCS7D01G179100 chr7D 87.500 1248 99 34 902 2127 132747920 132749132 0.000000e+00 1387.0
5 TraesCS7D01G179100 chr7D 83.968 761 71 26 2020 2751 132763478 132762740 0.000000e+00 682.0
6 TraesCS7D01G179100 chr7D 84.748 636 63 21 2020 2630 132829808 132829182 9.750000e-170 606.0
7 TraesCS7D01G179100 chr7D 90.661 257 20 4 2146 2399 132138043 132138298 3.930000e-89 339.0
8 TraesCS7D01G179100 chr7D 82.461 382 43 15 2020 2399 132742184 132742543 2.380000e-81 313.0
9 TraesCS7D01G179100 chr7D 79.144 374 32 15 2025 2373 132136725 132137077 1.920000e-52 217.0
10 TraesCS7D01G179100 chr7D 85.714 217 13 4 2848 3060 132138783 132138985 2.480000e-51 213.0
11 TraesCS7D01G179100 chr7D 87.363 182 16 5 2569 2749 132742624 132742799 5.380000e-48 202.0
12 TraesCS7D01G179100 chr7D 85.128 195 12 10 2569 2751 132138379 132138568 1.950000e-42 183.0
13 TraesCS7D01G179100 chr7D 95.192 104 5 0 2848 2951 132743061 132743164 7.050000e-37 165.0
14 TraesCS7D01G179100 chr7D 78.135 311 26 19 2756 3060 132137110 132137384 3.280000e-35 159.0
15 TraesCS7D01G179100 chr7D 82.682 179 24 5 2447 2622 132749406 132749580 5.490000e-33 152.0
16 TraesCS7D01G179100 chr7D 88.889 99 5 1 2756 2848 132205063 132205161 2.000000e-22 117.0
17 TraesCS7D01G179100 chr7D 88.119 101 7 2 808 903 194129131 194129231 7.210000e-22 115.0
18 TraesCS7D01G179100 chr7D 94.521 73 4 0 2848 2920 132205227 132205299 2.590000e-21 113.0
19 TraesCS7D01G179100 chr7D 96.364 55 1 1 2698 2751 132204870 132204924 4.370000e-14 89.8
20 TraesCS7D01G179100 chr7D 100.000 30 0 0 2756 2785 132138708 132138737 4.430000e-04 56.5
21 TraesCS7D01G179100 chr7B 87.782 1596 103 38 981 2500 94186390 94184811 0.000000e+00 1783.0
22 TraesCS7D01G179100 chr7B 89.516 1364 70 26 900 2209 94118526 94117182 0.000000e+00 1659.0
23 TraesCS7D01G179100 chr7B 92.465 1128 49 9 900 2012 93650492 93651598 0.000000e+00 1580.0
24 TraesCS7D01G179100 chr7B 87.665 1362 88 32 900 2203 157808288 157809627 0.000000e+00 1511.0
25 TraesCS7D01G179100 chr7B 87.670 1322 85 39 903 2203 93864476 93865740 0.000000e+00 1467.0
26 TraesCS7D01G179100 chr7B 87.635 1205 76 35 1476 2627 94143107 94141923 0.000000e+00 1332.0
27 TraesCS7D01G179100 chr7B 89.627 964 44 20 900 1816 94050970 94050016 0.000000e+00 1175.0
28 TraesCS7D01G179100 chr7B 89.862 434 37 6 1 431 94051549 94051120 4.630000e-153 551.0
29 TraesCS7D01G179100 chr7B 85.219 433 59 5 1 431 94119105 94118676 1.050000e-119 440.0
30 TraesCS7D01G179100 chr7B 78.931 636 67 32 2143 2747 93651861 93652460 1.390000e-98 370.0
31 TraesCS7D01G179100 chr7B 78.740 635 61 40 2143 2745 93572700 93573292 1.080000e-94 357.0
32 TraesCS7D01G179100 chr7B 89.270 233 22 3 69 298 93580940 93581172 4.010000e-74 289.0
33 TraesCS7D01G179100 chr7B 83.434 332 25 11 2197 2500 94049150 94048821 6.710000e-72 281.0
34 TraesCS7D01G179100 chr7B 84.397 282 25 13 2354 2629 94115388 94115120 3.150000e-65 259.0
35 TraesCS7D01G179100 chr7B 91.549 142 12 0 289 430 93647630 93647771 2.500000e-46 196.0
36 TraesCS7D01G179100 chr7B 95.050 101 5 0 807 907 93650367 93650467 3.280000e-35 159.0
37 TraesCS7D01G179100 chr7B 96.296 81 3 0 827 907 94051075 94050995 1.990000e-27 134.0
38 TraesCS7D01G179100 chr7B 96.250 80 3 0 827 906 94118631 94118552 7.160000e-27 132.0
39 TraesCS7D01G179100 chr7B 94.366 71 4 0 2756 2826 93866031 93866101 3.350000e-20 110.0
40 TraesCS7D01G179100 chr7B 84.685 111 11 5 2514 2622 93576540 93576646 4.340000e-19 106.0
41 TraesCS7D01G179100 chr7A 89.127 1306 85 27 900 2169 130782310 130783594 0.000000e+00 1572.0
42 TraesCS7D01G179100 chr7A 89.127 1306 85 27 900 2169 131121625 131120341 0.000000e+00 1572.0
43 TraesCS7D01G179100 chr7A 91.245 1165 60 21 1047 2203 210252312 210253442 0.000000e+00 1548.0
44 TraesCS7D01G179100 chr7A 87.509 1353 116 29 900 2209 131187674 131186332 0.000000e+00 1513.0
45 TraesCS7D01G179100 chr7A 87.922 770 54 22 900 1644 130891585 130892340 0.000000e+00 870.0
46 TraesCS7D01G179100 chr7A 84.913 749 83 23 2020 2751 210253321 210254056 0.000000e+00 730.0
47 TraesCS7D01G179100 chr7A 82.768 766 68 34 2020 2751 131108370 131107635 2.690000e-175 625.0
48 TraesCS7D01G179100 chr7A 90.646 449 24 3 1 433 131110398 131109952 5.910000e-162 580.0
49 TraesCS7D01G179100 chr7A 90.200 449 25 4 1 433 130890981 130891426 4.600000e-158 568.0
50 TraesCS7D01G179100 chr7A 93.478 138 8 1 771 907 131109955 131109818 1.490000e-48 204.0
51 TraesCS7D01G179100 chr7A 91.724 145 11 1 900 1043 131109793 131109649 1.930000e-47 200.0
52 TraesCS7D01G179100 chr7A 92.754 138 9 1 771 907 130891423 130891560 6.960000e-47 198.0
53 TraesCS7D01G179100 chr7A 85.789 190 14 7 2569 2751 130784129 130784312 4.190000e-44 189.0
54 TraesCS7D01G179100 chr7A 85.789 190 14 7 2569 2751 131119806 131119623 4.190000e-44 189.0
55 TraesCS7D01G179100 chr7A 85.030 167 17 5 2756 2916 130785004 130785168 2.540000e-36 163.0
56 TraesCS7D01G179100 chr7A 85.366 164 16 5 2759 2916 131118928 131118767 2.540000e-36 163.0
57 TraesCS7D01G179100 chr7A 86.316 95 7 1 2756 2844 130784452 130784546 7.260000e-17 99.0
58 TraesCS7D01G179100 chr7A 86.316 95 7 1 2756 2844 131119483 131119389 7.260000e-17 99.0
59 TraesCS7D01G179100 chr3A 91.014 345 27 4 430 771 42216549 42216892 2.230000e-126 462.0
60 TraesCS7D01G179100 chr1D 90.805 348 29 3 429 774 376624036 376623690 2.230000e-126 462.0
61 TraesCS7D01G179100 chr5B 87.106 349 32 9 432 778 26301194 26301531 1.790000e-102 383.0
62 TraesCS7D01G179100 chr6D 86.510 341 38 6 430 769 345398714 345399047 5.010000e-98 368.0
63 TraesCS7D01G179100 chr1B 87.698 252 25 4 525 771 656449282 656449032 4.010000e-74 289.0
64 TraesCS7D01G179100 chr4A 89.450 218 21 2 558 773 111106423 111106206 1.120000e-69 274.0
65 TraesCS7D01G179100 chr4A 98.000 50 1 0 432 481 135619981 135620030 1.570000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G179100 chr7D 132156097 132159275 3178 False 5871.000000 5871 100.000000 1 3179 1 chr7D.!!$F1 3178
1 TraesCS7D01G179100 chr7D 132762740 132764679 1939 True 1127.000000 1572 86.219000 900 2751 2 chr7D.!!$R2 1851
2 TraesCS7D01G179100 chr7D 194129131 194130559 1428 False 830.500000 1546 88.306500 808 2188 2 chr7D.!!$F6 1380
3 TraesCS7D01G179100 chr7D 132747920 132749580 1660 False 769.500000 1387 85.091000 902 2622 2 chr7D.!!$F5 1720
4 TraesCS7D01G179100 chr7D 132829182 132829808 626 True 606.000000 606 84.748000 2020 2630 1 chr7D.!!$R1 610
5 TraesCS7D01G179100 chr7D 132135516 132138985 3469 False 365.214286 1389 86.499857 900 3060 7 chr7D.!!$F2 2160
6 TraesCS7D01G179100 chr7D 132742184 132743164 980 False 226.666667 313 88.338667 2020 2951 3 chr7D.!!$F4 931
7 TraesCS7D01G179100 chr7B 94184811 94186390 1579 True 1783.000000 1783 87.782000 981 2500 1 chr7B.!!$R2 1519
8 TraesCS7D01G179100 chr7B 157808288 157809627 1339 False 1511.000000 1511 87.665000 900 2203 1 chr7B.!!$F2 1303
9 TraesCS7D01G179100 chr7B 94141923 94143107 1184 True 1332.000000 1332 87.635000 1476 2627 1 chr7B.!!$R1 1151
10 TraesCS7D01G179100 chr7B 93864476 93866101 1625 False 788.500000 1467 91.018000 903 2826 2 chr7B.!!$F5 1923
11 TraesCS7D01G179100 chr7B 94115120 94119105 3985 True 622.500000 1659 88.845500 1 2629 4 chr7B.!!$R4 2628
12 TraesCS7D01G179100 chr7B 93647630 93652460 4830 False 576.250000 1580 89.498750 289 2747 4 chr7B.!!$F4 2458
13 TraesCS7D01G179100 chr7B 94048821 94051549 2728 True 535.250000 1175 89.804750 1 2500 4 chr7B.!!$R3 2499
14 TraesCS7D01G179100 chr7B 93572700 93576646 3946 False 231.500000 357 81.712500 2143 2745 2 chr7B.!!$F3 602
15 TraesCS7D01G179100 chr7A 131186332 131187674 1342 True 1513.000000 1513 87.509000 900 2209 1 chr7A.!!$R1 1309
16 TraesCS7D01G179100 chr7A 210252312 210254056 1744 False 1139.000000 1548 88.079000 1047 2751 2 chr7A.!!$F3 1704
17 TraesCS7D01G179100 chr7A 130890981 130892340 1359 False 545.333333 870 90.292000 1 1644 3 chr7A.!!$F2 1643
18 TraesCS7D01G179100 chr7A 130782310 130785168 2858 False 505.750000 1572 86.565500 900 2916 4 chr7A.!!$F1 2016
19 TraesCS7D01G179100 chr7A 131118767 131121625 2858 True 505.750000 1572 86.649500 900 2916 4 chr7A.!!$R3 2016
20 TraesCS7D01G179100 chr7A 131107635 131110398 2763 True 402.250000 625 89.654000 1 2751 4 chr7A.!!$R2 2750

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
474 493 0.036952 CTATGTAGCTGCCCCATCCG 60.037 60.0 0.0 0.0 0.00 4.18 F
528 547 0.107017 TCTCCCAAAGCAGCCATAGC 60.107 55.0 0.0 0.0 40.32 2.97 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1723 4731 0.034896 CGGTTGTACCTCAGCACCTT 59.965 55.0 0.0 0.0 35.66 3.50 R
2227 6112 0.242286 CGAGGGATGATAGACAGGCG 59.758 60.0 0.0 0.0 0.00 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
203 215 1.203262 AGGTGGCAGGGTAGAGTGTTA 60.203 52.381 0.00 0.00 0.00 2.41
222 240 8.630054 AGTGTTAGCTGGATTTGTTACAAATA 57.370 30.769 21.34 8.00 0.00 1.40
298 317 5.221244 GGGTCATTATACAAAGGTGGATTGC 60.221 44.000 0.00 0.00 28.38 3.56
324 343 5.985911 AGCCTCAACACGGTTTTATAGTAT 58.014 37.500 0.00 0.00 0.00 2.12
386 405 5.648092 GGAGCCTTGTATAAACTGAACATGT 59.352 40.000 0.00 0.00 0.00 3.21
433 452 9.095065 GTGTTATTAGGTTGACACTGTATTAGG 57.905 37.037 0.00 0.00 39.33 2.69
434 453 8.262227 TGTTATTAGGTTGACACTGTATTAGGG 58.738 37.037 0.00 0.00 35.29 3.53
435 454 3.629142 AGGTTGACACTGTATTAGGGC 57.371 47.619 0.00 0.00 30.85 5.19
437 456 3.523564 AGGTTGACACTGTATTAGGGCAT 59.476 43.478 0.00 0.00 30.85 4.40
439 458 4.261801 GTTGACACTGTATTAGGGCATGT 58.738 43.478 0.00 0.00 30.85 3.21
441 460 5.018539 TGACACTGTATTAGGGCATGTAC 57.981 43.478 0.00 0.00 30.85 2.90
442 461 4.468153 TGACACTGTATTAGGGCATGTACA 59.532 41.667 0.00 0.00 30.85 2.90
443 462 5.046231 TGACACTGTATTAGGGCATGTACAA 60.046 40.000 0.00 0.00 30.85 2.41
444 463 6.001449 ACACTGTATTAGGGCATGTACAAT 57.999 37.500 0.00 0.00 30.85 2.71
445 464 5.822519 ACACTGTATTAGGGCATGTACAATG 59.177 40.000 0.00 6.48 32.40 2.82
447 466 6.542005 CACTGTATTAGGGCATGTACAATGAA 59.458 38.462 0.00 0.00 28.75 2.57
448 467 6.767902 ACTGTATTAGGGCATGTACAATGAAG 59.232 38.462 0.00 0.00 0.00 3.02
449 468 6.061441 TGTATTAGGGCATGTACAATGAAGG 58.939 40.000 0.00 0.00 0.00 3.46
450 469 1.767759 AGGGCATGTACAATGAAGGC 58.232 50.000 0.00 0.22 0.00 4.35
451 470 1.005805 AGGGCATGTACAATGAAGGCA 59.994 47.619 0.00 0.00 0.00 4.75
452 471 1.406539 GGGCATGTACAATGAAGGCAG 59.593 52.381 0.00 0.00 0.00 4.85
453 472 1.202336 GGCATGTACAATGAAGGCAGC 60.202 52.381 0.00 0.00 0.00 5.25
454 473 1.473677 GCATGTACAATGAAGGCAGCA 59.526 47.619 0.00 0.00 0.00 4.41
455 474 2.733227 GCATGTACAATGAAGGCAGCAC 60.733 50.000 0.00 0.00 0.00 4.40
456 475 2.566833 TGTACAATGAAGGCAGCACT 57.433 45.000 0.00 0.00 0.00 4.40
457 476 3.694043 TGTACAATGAAGGCAGCACTA 57.306 42.857 0.00 0.00 0.00 2.74
458 477 4.220693 TGTACAATGAAGGCAGCACTAT 57.779 40.909 0.00 0.00 0.00 2.12
459 478 3.940852 TGTACAATGAAGGCAGCACTATG 59.059 43.478 0.00 0.00 0.00 2.23
460 479 3.077484 ACAATGAAGGCAGCACTATGT 57.923 42.857 0.00 0.00 0.00 2.29
461 480 4.220693 ACAATGAAGGCAGCACTATGTA 57.779 40.909 0.00 0.00 0.00 2.29
462 481 4.194640 ACAATGAAGGCAGCACTATGTAG 58.805 43.478 0.00 0.00 0.00 2.74
463 482 2.315925 TGAAGGCAGCACTATGTAGC 57.684 50.000 0.00 0.00 0.00 3.58
464 483 1.833630 TGAAGGCAGCACTATGTAGCT 59.166 47.619 0.00 0.00 42.94 3.32
469 488 1.832912 AGCACTATGTAGCTGCCCC 59.167 57.895 0.00 0.00 40.13 5.80
470 489 0.982852 AGCACTATGTAGCTGCCCCA 60.983 55.000 0.00 0.00 40.13 4.96
471 490 0.109342 GCACTATGTAGCTGCCCCAT 59.891 55.000 0.00 1.20 0.00 4.00
472 491 1.879796 GCACTATGTAGCTGCCCCATC 60.880 57.143 0.00 0.00 0.00 3.51
473 492 1.059913 ACTATGTAGCTGCCCCATCC 58.940 55.000 0.00 0.00 0.00 3.51
474 493 0.036952 CTATGTAGCTGCCCCATCCG 60.037 60.000 0.00 0.00 0.00 4.18
475 494 2.111999 TATGTAGCTGCCCCATCCGC 62.112 60.000 0.00 0.00 0.00 5.54
476 495 4.937431 GTAGCTGCCCCATCCGCC 62.937 72.222 0.00 0.00 0.00 6.13
480 499 4.511246 CTGCCCCATCCGCCATGT 62.511 66.667 0.00 0.00 0.00 3.21
481 500 3.093172 TGCCCCATCCGCCATGTA 61.093 61.111 0.00 0.00 0.00 2.29
482 501 2.281761 GCCCCATCCGCCATGTAG 60.282 66.667 0.00 0.00 0.00 2.74
483 502 2.431683 CCCCATCCGCCATGTAGG 59.568 66.667 0.00 0.00 41.84 3.18
484 503 2.452064 CCCCATCCGCCATGTAGGT 61.452 63.158 3.97 0.00 40.61 3.08
485 504 1.531748 CCCATCCGCCATGTAGGTT 59.468 57.895 3.97 0.00 40.61 3.50
486 505 0.819259 CCCATCCGCCATGTAGGTTG 60.819 60.000 3.97 5.89 40.61 3.77
487 506 0.180171 CCATCCGCCATGTAGGTTGA 59.820 55.000 13.33 0.00 40.61 3.18
488 507 1.586422 CATCCGCCATGTAGGTTGAG 58.414 55.000 8.33 0.00 40.61 3.02
489 508 1.138859 CATCCGCCATGTAGGTTGAGA 59.861 52.381 8.33 0.00 40.61 3.27
490 509 0.535335 TCCGCCATGTAGGTTGAGAC 59.465 55.000 3.97 0.00 40.61 3.36
491 510 0.462047 CCGCCATGTAGGTTGAGACC 60.462 60.000 0.00 0.00 46.92 3.85
507 526 8.336801 GGTTGAGACCACTGTATAATTTTTCT 57.663 34.615 0.00 0.00 45.77 2.52
508 527 8.451748 GGTTGAGACCACTGTATAATTTTTCTC 58.548 37.037 0.00 0.00 45.77 2.87
509 528 9.220767 GTTGAGACCACTGTATAATTTTTCTCT 57.779 33.333 0.00 0.00 0.00 3.10
510 529 9.436957 TTGAGACCACTGTATAATTTTTCTCTC 57.563 33.333 0.00 0.00 0.00 3.20
511 530 8.816894 TGAGACCACTGTATAATTTTTCTCTCT 58.183 33.333 0.00 0.00 0.00 3.10
512 531 9.308318 GAGACCACTGTATAATTTTTCTCTCTC 57.692 37.037 0.00 0.00 0.00 3.20
513 532 8.261522 AGACCACTGTATAATTTTTCTCTCTCC 58.738 37.037 0.00 0.00 0.00 3.71
514 533 7.339482 ACCACTGTATAATTTTTCTCTCTCCC 58.661 38.462 0.00 0.00 0.00 4.30
515 534 7.037586 ACCACTGTATAATTTTTCTCTCTCCCA 60.038 37.037 0.00 0.00 0.00 4.37
516 535 7.829211 CCACTGTATAATTTTTCTCTCTCCCAA 59.171 37.037 0.00 0.00 0.00 4.12
517 536 9.231297 CACTGTATAATTTTTCTCTCTCCCAAA 57.769 33.333 0.00 0.00 0.00 3.28
518 537 9.454859 ACTGTATAATTTTTCTCTCTCCCAAAG 57.545 33.333 0.00 0.00 0.00 2.77
519 538 8.281212 TGTATAATTTTTCTCTCTCCCAAAGC 57.719 34.615 0.00 0.00 0.00 3.51
520 539 7.888021 TGTATAATTTTTCTCTCTCCCAAAGCA 59.112 33.333 0.00 0.00 0.00 3.91
521 540 5.718724 AATTTTTCTCTCTCCCAAAGCAG 57.281 39.130 0.00 0.00 0.00 4.24
522 541 2.191128 TTTCTCTCTCCCAAAGCAGC 57.809 50.000 0.00 0.00 0.00 5.25
523 542 0.326264 TTCTCTCTCCCAAAGCAGCC 59.674 55.000 0.00 0.00 0.00 4.85
524 543 0.837691 TCTCTCTCCCAAAGCAGCCA 60.838 55.000 0.00 0.00 0.00 4.75
525 544 0.255318 CTCTCTCCCAAAGCAGCCAT 59.745 55.000 0.00 0.00 0.00 4.40
526 545 1.487976 CTCTCTCCCAAAGCAGCCATA 59.512 52.381 0.00 0.00 0.00 2.74
527 546 1.487976 TCTCTCCCAAAGCAGCCATAG 59.512 52.381 0.00 0.00 0.00 2.23
528 547 0.107017 TCTCCCAAAGCAGCCATAGC 60.107 55.000 0.00 0.00 40.32 2.97
538 557 2.902343 GCCATAGCTTGCCCGGAC 60.902 66.667 0.73 0.00 35.50 4.79
539 558 2.203209 CCATAGCTTGCCCGGACC 60.203 66.667 0.73 0.00 0.00 4.46
540 559 2.588877 CATAGCTTGCCCGGACCG 60.589 66.667 6.99 6.99 0.00 4.79
541 560 4.547367 ATAGCTTGCCCGGACCGC 62.547 66.667 8.86 0.00 0.00 5.68
550 569 4.530857 CCGGACCGCACCTCCATC 62.531 72.222 8.86 0.00 0.00 3.51
551 570 3.770040 CGGACCGCACCTCCATCA 61.770 66.667 0.00 0.00 0.00 3.07
552 571 2.911143 GGACCGCACCTCCATCAT 59.089 61.111 0.00 0.00 0.00 2.45
553 572 1.744320 CGGACCGCACCTCCATCATA 61.744 60.000 0.00 0.00 0.00 2.15
554 573 0.687354 GGACCGCACCTCCATCATAT 59.313 55.000 0.00 0.00 0.00 1.78
555 574 1.072331 GGACCGCACCTCCATCATATT 59.928 52.381 0.00 0.00 0.00 1.28
556 575 2.487265 GGACCGCACCTCCATCATATTT 60.487 50.000 0.00 0.00 0.00 1.40
557 576 2.808543 GACCGCACCTCCATCATATTTC 59.191 50.000 0.00 0.00 0.00 2.17
558 577 2.439507 ACCGCACCTCCATCATATTTCT 59.560 45.455 0.00 0.00 0.00 2.52
559 578 3.117888 ACCGCACCTCCATCATATTTCTT 60.118 43.478 0.00 0.00 0.00 2.52
560 579 4.102524 ACCGCACCTCCATCATATTTCTTA 59.897 41.667 0.00 0.00 0.00 2.10
561 580 4.692625 CCGCACCTCCATCATATTTCTTAG 59.307 45.833 0.00 0.00 0.00 2.18
562 581 4.153117 CGCACCTCCATCATATTTCTTAGC 59.847 45.833 0.00 0.00 0.00 3.09
563 582 5.065914 GCACCTCCATCATATTTCTTAGCA 58.934 41.667 0.00 0.00 0.00 3.49
564 583 5.709164 GCACCTCCATCATATTTCTTAGCAT 59.291 40.000 0.00 0.00 0.00 3.79
565 584 6.128063 GCACCTCCATCATATTTCTTAGCATC 60.128 42.308 0.00 0.00 0.00 3.91
566 585 7.166851 CACCTCCATCATATTTCTTAGCATCT 58.833 38.462 0.00 0.00 0.00 2.90
567 586 7.333921 CACCTCCATCATATTTCTTAGCATCTC 59.666 40.741 0.00 0.00 0.00 2.75
568 587 7.237263 ACCTCCATCATATTTCTTAGCATCTCT 59.763 37.037 0.00 0.00 0.00 3.10
569 588 7.765360 CCTCCATCATATTTCTTAGCATCTCTC 59.235 40.741 0.00 0.00 0.00 3.20
570 589 8.433249 TCCATCATATTTCTTAGCATCTCTCT 57.567 34.615 0.00 0.00 0.00 3.10
571 590 8.878211 TCCATCATATTTCTTAGCATCTCTCTT 58.122 33.333 0.00 0.00 0.00 2.85
580 599 8.779354 TTCTTAGCATCTCTCTTACTTTTTCC 57.221 34.615 0.00 0.00 0.00 3.13
581 600 8.140112 TCTTAGCATCTCTCTTACTTTTTCCT 57.860 34.615 0.00 0.00 0.00 3.36
582 601 8.598041 TCTTAGCATCTCTCTTACTTTTTCCTT 58.402 33.333 0.00 0.00 0.00 3.36
583 602 9.225436 CTTAGCATCTCTCTTACTTTTTCCTTT 57.775 33.333 0.00 0.00 0.00 3.11
585 604 8.554835 AGCATCTCTCTTACTTTTTCCTTTAC 57.445 34.615 0.00 0.00 0.00 2.01
586 605 8.157476 AGCATCTCTCTTACTTTTTCCTTTACA 58.843 33.333 0.00 0.00 0.00 2.41
587 606 8.231161 GCATCTCTCTTACTTTTTCCTTTACAC 58.769 37.037 0.00 0.00 0.00 2.90
588 607 9.273016 CATCTCTCTTACTTTTTCCTTTACACA 57.727 33.333 0.00 0.00 0.00 3.72
590 609 9.273016 TCTCTCTTACTTTTTCCTTTACACATG 57.727 33.333 0.00 0.00 0.00 3.21
591 610 7.871853 TCTCTTACTTTTTCCTTTACACATGC 58.128 34.615 0.00 0.00 0.00 4.06
592 611 7.500892 TCTCTTACTTTTTCCTTTACACATGCA 59.499 33.333 0.00 0.00 0.00 3.96
593 612 8.177119 TCTTACTTTTTCCTTTACACATGCAT 57.823 30.769 0.00 0.00 0.00 3.96
594 613 8.296713 TCTTACTTTTTCCTTTACACATGCATC 58.703 33.333 0.00 0.00 0.00 3.91
595 614 6.403866 ACTTTTTCCTTTACACATGCATCA 57.596 33.333 0.00 0.00 0.00 3.07
596 615 6.215845 ACTTTTTCCTTTACACATGCATCAC 58.784 36.000 0.00 0.00 0.00 3.06
597 616 5.781210 TTTTCCTTTACACATGCATCACA 57.219 34.783 0.00 0.00 0.00 3.58
598 617 5.981088 TTTCCTTTACACATGCATCACAT 57.019 34.783 0.00 0.00 40.66 3.21
599 618 5.565592 TTCCTTTACACATGCATCACATC 57.434 39.130 0.00 0.00 36.64 3.06
600 619 4.847198 TCCTTTACACATGCATCACATCT 58.153 39.130 0.00 0.00 36.64 2.90
601 620 4.877823 TCCTTTACACATGCATCACATCTC 59.122 41.667 0.00 0.00 36.64 2.75
602 621 4.880120 CCTTTACACATGCATCACATCTCT 59.120 41.667 0.00 0.00 36.64 3.10
603 622 5.007430 CCTTTACACATGCATCACATCTCTC 59.993 44.000 0.00 0.00 36.64 3.20
604 623 3.622166 ACACATGCATCACATCTCTCA 57.378 42.857 0.00 0.00 36.64 3.27
605 624 3.268330 ACACATGCATCACATCTCTCAC 58.732 45.455 0.00 0.00 36.64 3.51
606 625 3.267483 CACATGCATCACATCTCTCACA 58.733 45.455 0.00 0.00 36.64 3.58
607 626 3.687698 CACATGCATCACATCTCTCACAA 59.312 43.478 0.00 0.00 36.64 3.33
608 627 3.688185 ACATGCATCACATCTCTCACAAC 59.312 43.478 0.00 0.00 36.64 3.32
609 628 2.340337 TGCATCACATCTCTCACAACG 58.660 47.619 0.00 0.00 0.00 4.10
610 629 2.289010 TGCATCACATCTCTCACAACGT 60.289 45.455 0.00 0.00 0.00 3.99
611 630 2.093310 GCATCACATCTCTCACAACGTG 59.907 50.000 0.00 0.00 34.45 4.49
612 631 3.320626 CATCACATCTCTCACAACGTGT 58.679 45.455 0.00 0.00 34.79 4.49
613 632 3.452755 TCACATCTCTCACAACGTGTT 57.547 42.857 0.00 0.00 34.79 3.32
614 633 3.381045 TCACATCTCTCACAACGTGTTC 58.619 45.455 0.00 0.00 34.79 3.18
615 634 3.068165 TCACATCTCTCACAACGTGTTCT 59.932 43.478 0.00 0.00 34.79 3.01
616 635 3.804325 CACATCTCTCACAACGTGTTCTT 59.196 43.478 0.00 0.00 34.79 2.52
617 636 4.051922 ACATCTCTCACAACGTGTTCTTC 58.948 43.478 0.00 0.00 34.79 2.87
618 637 4.202161 ACATCTCTCACAACGTGTTCTTCT 60.202 41.667 0.00 0.00 34.79 2.85
619 638 4.386867 TCTCTCACAACGTGTTCTTCTT 57.613 40.909 0.00 0.00 34.79 2.52
620 639 4.755411 TCTCTCACAACGTGTTCTTCTTT 58.245 39.130 0.00 0.00 34.79 2.52
621 640 5.175859 TCTCTCACAACGTGTTCTTCTTTT 58.824 37.500 0.00 0.00 34.79 2.27
622 641 5.642063 TCTCTCACAACGTGTTCTTCTTTTT 59.358 36.000 0.00 0.00 34.79 1.94
647 666 8.954950 TTGCTTTATTTCAACTTTTTGGATGA 57.045 26.923 0.00 0.00 33.06 2.92
648 667 8.954950 TGCTTTATTTCAACTTTTTGGATGAA 57.045 26.923 0.00 0.00 33.06 2.57
649 668 9.044150 TGCTTTATTTCAACTTTTTGGATGAAG 57.956 29.630 0.00 0.00 33.71 3.02
650 669 8.011673 GCTTTATTTCAACTTTTTGGATGAAGC 58.988 33.333 11.49 11.49 38.91 3.86
651 670 8.954950 TTTATTTCAACTTTTTGGATGAAGCA 57.045 26.923 0.00 0.00 33.71 3.91
652 671 6.849588 ATTTCAACTTTTTGGATGAAGCAC 57.150 33.333 0.00 0.00 33.71 4.40
653 672 4.320608 TCAACTTTTTGGATGAAGCACC 57.679 40.909 0.00 0.00 33.06 5.01
654 673 3.703556 TCAACTTTTTGGATGAAGCACCA 59.296 39.130 0.00 0.00 33.06 4.17
655 674 4.053295 CAACTTTTTGGATGAAGCACCAG 58.947 43.478 0.00 0.00 37.48 4.00
656 675 3.299503 ACTTTTTGGATGAAGCACCAGT 58.700 40.909 0.00 0.00 37.48 4.00
657 676 3.319122 ACTTTTTGGATGAAGCACCAGTC 59.681 43.478 0.00 0.00 37.48 3.51
658 677 2.957402 TTTGGATGAAGCACCAGTCT 57.043 45.000 0.00 0.00 37.48 3.24
659 678 2.479566 TTGGATGAAGCACCAGTCTC 57.520 50.000 0.00 0.00 37.48 3.36
660 679 0.615331 TGGATGAAGCACCAGTCTCC 59.385 55.000 0.00 0.00 0.00 3.71
661 680 0.908198 GGATGAAGCACCAGTCTCCT 59.092 55.000 0.00 0.00 0.00 3.69
662 681 1.134551 GGATGAAGCACCAGTCTCCTC 60.135 57.143 0.00 0.00 0.00 3.71
663 682 1.830477 GATGAAGCACCAGTCTCCTCT 59.170 52.381 0.00 0.00 0.00 3.69
664 683 0.972134 TGAAGCACCAGTCTCCTCTG 59.028 55.000 0.00 0.00 35.45 3.35
665 684 0.972883 GAAGCACCAGTCTCCTCTGT 59.027 55.000 0.00 0.00 34.02 3.41
666 685 2.171840 GAAGCACCAGTCTCCTCTGTA 58.828 52.381 0.00 0.00 34.02 2.74
667 686 2.310779 AGCACCAGTCTCCTCTGTAA 57.689 50.000 0.00 0.00 34.02 2.41
668 687 2.175202 AGCACCAGTCTCCTCTGTAAG 58.825 52.381 0.00 0.00 34.02 2.34
669 688 2.171840 GCACCAGTCTCCTCTGTAAGA 58.828 52.381 0.00 0.00 43.69 2.10
670 689 2.563179 GCACCAGTCTCCTCTGTAAGAA 59.437 50.000 0.00 0.00 46.34 2.52
671 690 3.615351 GCACCAGTCTCCTCTGTAAGAAC 60.615 52.174 0.00 0.00 46.34 3.01
672 691 3.056465 CACCAGTCTCCTCTGTAAGAACC 60.056 52.174 0.00 0.00 46.34 3.62
673 692 2.498078 CCAGTCTCCTCTGTAAGAACCC 59.502 54.545 0.00 0.00 46.34 4.11
674 693 2.164624 CAGTCTCCTCTGTAAGAACCCG 59.835 54.545 0.00 0.00 46.34 5.28
675 694 2.169330 GTCTCCTCTGTAAGAACCCGT 58.831 52.381 0.00 0.00 46.34 5.28
676 695 2.561858 GTCTCCTCTGTAAGAACCCGTT 59.438 50.000 0.00 0.00 46.34 4.44
677 696 2.824341 TCTCCTCTGTAAGAACCCGTTC 59.176 50.000 0.00 0.00 46.34 3.95
678 697 1.897802 TCCTCTGTAAGAACCCGTTCC 59.102 52.381 3.97 0.00 46.34 3.62
679 698 1.900486 CCTCTGTAAGAACCCGTTCCT 59.100 52.381 3.97 0.00 46.34 3.36
680 699 2.094130 CCTCTGTAAGAACCCGTTCCTC 60.094 54.545 3.97 0.00 46.34 3.71
681 700 2.826725 CTCTGTAAGAACCCGTTCCTCT 59.173 50.000 3.97 0.00 46.34 3.69
682 701 2.824341 TCTGTAAGAACCCGTTCCTCTC 59.176 50.000 3.97 0.00 42.31 3.20
683 702 2.826725 CTGTAAGAACCCGTTCCTCTCT 59.173 50.000 3.97 0.00 40.33 3.10
684 703 3.236896 TGTAAGAACCCGTTCCTCTCTT 58.763 45.455 3.97 0.00 40.33 2.85
685 704 3.257624 TGTAAGAACCCGTTCCTCTCTTC 59.742 47.826 3.97 0.00 40.33 2.87
686 705 2.011122 AGAACCCGTTCCTCTCTTCA 57.989 50.000 3.97 0.00 40.33 3.02
687 706 2.326428 AGAACCCGTTCCTCTCTTCAA 58.674 47.619 3.97 0.00 40.33 2.69
688 707 2.300437 AGAACCCGTTCCTCTCTTCAAG 59.700 50.000 3.97 0.00 40.33 3.02
689 708 0.321996 ACCCGTTCCTCTCTTCAAGC 59.678 55.000 0.00 0.00 0.00 4.01
690 709 0.321671 CCCGTTCCTCTCTTCAAGCA 59.678 55.000 0.00 0.00 0.00 3.91
691 710 1.433534 CCGTTCCTCTCTTCAAGCAC 58.566 55.000 0.00 0.00 0.00 4.40
692 711 1.001406 CCGTTCCTCTCTTCAAGCACT 59.999 52.381 0.00 0.00 0.00 4.40
693 712 2.231478 CCGTTCCTCTCTTCAAGCACTA 59.769 50.000 0.00 0.00 0.00 2.74
694 713 3.506810 CGTTCCTCTCTTCAAGCACTAG 58.493 50.000 0.00 0.00 0.00 2.57
695 714 3.258228 GTTCCTCTCTTCAAGCACTAGC 58.742 50.000 0.00 0.00 42.56 3.42
719 738 4.559862 TTTTCCCTCTCTCTTCCACATC 57.440 45.455 0.00 0.00 0.00 3.06
720 739 2.928036 TCCCTCTCTCTTCCACATCA 57.072 50.000 0.00 0.00 0.00 3.07
721 740 2.461695 TCCCTCTCTCTTCCACATCAC 58.538 52.381 0.00 0.00 0.00 3.06
722 741 1.484240 CCCTCTCTCTTCCACATCACC 59.516 57.143 0.00 0.00 0.00 4.02
723 742 2.182827 CCTCTCTCTTCCACATCACCA 58.817 52.381 0.00 0.00 0.00 4.17
724 743 2.168106 CCTCTCTCTTCCACATCACCAG 59.832 54.545 0.00 0.00 0.00 4.00
725 744 1.552337 TCTCTCTTCCACATCACCAGC 59.448 52.381 0.00 0.00 0.00 4.85
726 745 1.554160 CTCTCTTCCACATCACCAGCT 59.446 52.381 0.00 0.00 0.00 4.24
727 746 1.980765 TCTCTTCCACATCACCAGCTT 59.019 47.619 0.00 0.00 0.00 3.74
728 747 2.373169 TCTCTTCCACATCACCAGCTTT 59.627 45.455 0.00 0.00 0.00 3.51
729 748 3.152341 CTCTTCCACATCACCAGCTTTT 58.848 45.455 0.00 0.00 0.00 2.27
730 749 3.149196 TCTTCCACATCACCAGCTTTTC 58.851 45.455 0.00 0.00 0.00 2.29
731 750 2.957402 TCCACATCACCAGCTTTTCT 57.043 45.000 0.00 0.00 0.00 2.52
732 751 4.041567 TCTTCCACATCACCAGCTTTTCTA 59.958 41.667 0.00 0.00 0.00 2.10
733 752 4.574674 TCCACATCACCAGCTTTTCTAT 57.425 40.909 0.00 0.00 0.00 1.98
734 753 4.264253 TCCACATCACCAGCTTTTCTATG 58.736 43.478 0.00 0.00 0.00 2.23
735 754 3.379372 CCACATCACCAGCTTTTCTATGG 59.621 47.826 0.00 0.00 40.10 2.74
736 755 4.264253 CACATCACCAGCTTTTCTATGGA 58.736 43.478 0.00 0.00 37.54 3.41
737 756 4.334759 CACATCACCAGCTTTTCTATGGAG 59.665 45.833 0.00 0.00 37.54 3.86
738 757 2.991250 TCACCAGCTTTTCTATGGAGC 58.009 47.619 0.00 0.00 37.54 4.70
739 758 2.305635 TCACCAGCTTTTCTATGGAGCA 59.694 45.455 0.00 0.00 38.85 4.26
740 759 2.681848 CACCAGCTTTTCTATGGAGCAG 59.318 50.000 0.00 0.00 38.85 4.24
741 760 1.674962 CCAGCTTTTCTATGGAGCAGC 59.325 52.381 4.02 4.02 38.85 5.25
742 761 2.362736 CAGCTTTTCTATGGAGCAGCA 58.637 47.619 12.31 0.00 38.85 4.41
743 762 2.355132 CAGCTTTTCTATGGAGCAGCAG 59.645 50.000 12.31 2.99 38.85 4.24
744 763 2.026449 AGCTTTTCTATGGAGCAGCAGT 60.026 45.455 12.31 0.00 38.85 4.40
745 764 2.354199 GCTTTTCTATGGAGCAGCAGTC 59.646 50.000 0.00 0.00 36.45 3.51
746 765 2.698855 TTTCTATGGAGCAGCAGTCC 57.301 50.000 0.00 0.00 34.31 3.85
750 769 3.567308 TGGAGCAGCAGTCCAACT 58.433 55.556 0.75 0.00 41.32 3.16
751 770 1.839191 TGGAGCAGCAGTCCAACTT 59.161 52.632 0.75 0.00 41.32 2.66
752 771 0.535780 TGGAGCAGCAGTCCAACTTG 60.536 55.000 0.75 0.00 41.32 3.16
753 772 1.239968 GGAGCAGCAGTCCAACTTGG 61.240 60.000 0.74 0.74 39.43 3.61
754 773 0.250467 GAGCAGCAGTCCAACTTGGA 60.250 55.000 6.39 6.39 45.98 3.53
762 781 2.657297 TCCAACTTGGAGCATTGGC 58.343 52.632 6.39 0.00 42.67 4.52
763 782 0.899717 TCCAACTTGGAGCATTGGCC 60.900 55.000 6.39 0.00 42.67 5.36
764 783 1.186917 CCAACTTGGAGCATTGGCCA 61.187 55.000 0.00 0.00 40.96 5.36
765 784 0.899720 CAACTTGGAGCATTGGCCAT 59.100 50.000 6.09 0.00 42.56 4.40
766 785 0.899720 AACTTGGAGCATTGGCCATG 59.100 50.000 6.09 8.63 42.56 3.66
778 797 3.513209 GGCCATGCCCTTAGCTTAA 57.487 52.632 0.00 0.00 44.06 1.85
779 798 1.322442 GGCCATGCCCTTAGCTTAAG 58.678 55.000 0.00 0.00 44.06 1.85
780 799 0.670706 GCCATGCCCTTAGCTTAAGC 59.329 55.000 20.09 20.09 44.23 3.09
803 3372 2.977914 TGAGCTGTCTATTGCTTCCAC 58.022 47.619 0.00 0.00 39.91 4.02
920 3528 1.128692 GCAGCACGAATCGTAAAGCTT 59.871 47.619 14.95 0.00 38.32 3.74
1098 3837 5.644644 CAGAAGAGAGAGAGAAAGAAGAGC 58.355 45.833 0.00 0.00 0.00 4.09
1331 4259 0.462759 CGTCATCCCCAGCTTCTTCC 60.463 60.000 0.00 0.00 0.00 3.46
1730 4738 2.143594 GACGACGACTCCAAGGTGCT 62.144 60.000 0.00 0.00 0.00 4.40
1882 5385 1.162698 CCACGTCAAGGTCGAGTAGA 58.837 55.000 0.00 0.00 0.00 2.59
1973 5498 4.709397 TGGTCATGTTTGGTGTCTTTCTTT 59.291 37.500 0.00 0.00 0.00 2.52
2113 5645 7.442062 GGTGAAATTGGTCATGAAATTCTGTTT 59.558 33.333 0.00 0.00 0.00 2.83
2137 5690 9.598517 TTTATTTCCTCAAATTTGGCATATGAC 57.401 29.630 17.90 3.57 33.95 3.06
2217 5944 5.765176 TGATGAACTGCTTTGATTGTCTTG 58.235 37.500 0.00 0.00 0.00 3.02
2221 6106 3.484407 ACTGCTTTGATTGTCTTGAGCT 58.516 40.909 0.00 0.00 0.00 4.09
2222 6107 4.645535 ACTGCTTTGATTGTCTTGAGCTA 58.354 39.130 0.00 0.00 0.00 3.32
2223 6108 4.694509 ACTGCTTTGATTGTCTTGAGCTAG 59.305 41.667 0.00 0.00 0.00 3.42
2224 6109 4.645535 TGCTTTGATTGTCTTGAGCTAGT 58.354 39.130 0.00 0.00 0.00 2.57
2225 6110 5.065914 TGCTTTGATTGTCTTGAGCTAGTT 58.934 37.500 0.00 0.00 0.00 2.24
2226 6111 5.532406 TGCTTTGATTGTCTTGAGCTAGTTT 59.468 36.000 0.00 0.00 0.00 2.66
2227 6112 6.082984 GCTTTGATTGTCTTGAGCTAGTTTC 58.917 40.000 0.00 0.00 0.00 2.78
2228 6113 5.845985 TTGATTGTCTTGAGCTAGTTTCG 57.154 39.130 0.00 0.00 0.00 3.46
2229 6114 3.679980 TGATTGTCTTGAGCTAGTTTCGC 59.320 43.478 0.00 0.00 0.00 4.70
2239 6125 3.024547 AGCTAGTTTCGCCTGTCTATCA 58.975 45.455 0.00 0.00 0.00 2.15
2241 6127 3.984633 GCTAGTTTCGCCTGTCTATCATC 59.015 47.826 0.00 0.00 0.00 2.92
2249 6135 2.103263 GCCTGTCTATCATCCCTCGTTT 59.897 50.000 0.00 0.00 0.00 3.60
2250 6136 3.800604 GCCTGTCTATCATCCCTCGTTTC 60.801 52.174 0.00 0.00 0.00 2.78
2252 6138 4.100189 CCTGTCTATCATCCCTCGTTTCTT 59.900 45.833 0.00 0.00 0.00 2.52
2321 7256 1.883926 TCCTCGAGTTTGACGTCATGA 59.116 47.619 20.80 8.62 0.00 3.07
2374 8958 1.317613 TTTGCTTGCTGTTCCGTGAT 58.682 45.000 0.00 0.00 0.00 3.06
2376 8960 2.177394 TGCTTGCTGTTCCGTGATTA 57.823 45.000 0.00 0.00 0.00 1.75
2433 9963 1.839424 TGCTTGTCTGATCTCCTCGA 58.161 50.000 0.00 0.00 0.00 4.04
2510 13706 3.308866 AGTTTGTAGTTGCGTGAACTGTC 59.691 43.478 11.03 6.10 45.05 3.51
2611 13821 7.812191 TGAATGTTTTGTGTTTATCCTATGTGC 59.188 33.333 0.00 0.00 0.00 4.57
2656 13866 5.063204 TGTACTTTGGTGGAGAAGTTGATG 58.937 41.667 0.00 0.00 37.32 3.07
2666 13883 4.528206 TGGAGAAGTTGATGCTGAACTCTA 59.472 41.667 0.00 0.00 32.33 2.43
2668 13885 6.112058 GGAGAAGTTGATGCTGAACTCTATT 58.888 40.000 0.00 0.00 32.33 1.73
2671 13888 6.593382 AGAAGTTGATGCTGAACTCTATTGAC 59.407 38.462 0.00 0.00 32.33 3.18
2675 13892 7.446625 AGTTGATGCTGAACTCTATTGACTTTT 59.553 33.333 0.00 0.00 0.00 2.27
2678 13895 6.791887 TGCTGAACTCTATTGACTTTTCAG 57.208 37.500 11.15 11.15 41.82 3.02
2682 13900 7.172361 GCTGAACTCTATTGACTTTTCAGAAGT 59.828 37.037 16.17 0.00 41.57 3.01
2754 14058 8.968242 GTGATTAAACTTGTTGATTTCCTGAAC 58.032 33.333 0.00 0.00 0.00 3.18
2785 14189 5.730550 TCTGTGTTACTTTGTCAGAACAGT 58.269 37.500 0.00 0.00 36.57 3.55
2786 14190 6.869695 TCTGTGTTACTTTGTCAGAACAGTA 58.130 36.000 0.00 0.00 36.57 2.74
2787 14191 7.324935 TCTGTGTTACTTTGTCAGAACAGTAA 58.675 34.615 0.00 0.00 36.57 2.24
2788 14192 7.277098 TCTGTGTTACTTTGTCAGAACAGTAAC 59.723 37.037 15.23 15.23 42.11 2.50
2789 14193 7.101054 TGTGTTACTTTGTCAGAACAGTAACT 58.899 34.615 19.40 0.00 42.18 2.24
2790 14194 7.064134 TGTGTTACTTTGTCAGAACAGTAACTG 59.936 37.037 19.40 0.00 42.18 3.16
2802 14206 4.593597 ACAGTAACTGTTCGTGTTTGTG 57.406 40.909 0.00 0.00 42.59 3.33
2803 14207 3.372822 ACAGTAACTGTTCGTGTTTGTGG 59.627 43.478 0.00 0.00 42.59 4.17
2804 14208 3.372822 CAGTAACTGTTCGTGTTTGTGGT 59.627 43.478 0.00 0.00 0.00 4.16
2805 14209 3.619929 AGTAACTGTTCGTGTTTGTGGTC 59.380 43.478 0.00 0.00 0.00 4.02
2806 14210 1.003851 ACTGTTCGTGTTTGTGGTCG 58.996 50.000 0.00 0.00 0.00 4.79
2807 14211 1.003851 CTGTTCGTGTTTGTGGTCGT 58.996 50.000 0.00 0.00 0.00 4.34
2808 14212 2.195096 CTGTTCGTGTTTGTGGTCGTA 58.805 47.619 0.00 0.00 0.00 3.43
2809 14213 2.195096 TGTTCGTGTTTGTGGTCGTAG 58.805 47.619 0.00 0.00 0.00 3.51
2810 14214 1.071041 GTTCGTGTTTGTGGTCGTAGC 60.071 52.381 0.00 0.00 0.00 3.58
2811 14215 0.935831 TCGTGTTTGTGGTCGTAGCG 60.936 55.000 0.00 0.00 0.00 4.26
2812 14216 1.210545 CGTGTTTGTGGTCGTAGCGT 61.211 55.000 0.00 0.00 0.00 5.07
2813 14217 0.932399 GTGTTTGTGGTCGTAGCGTT 59.068 50.000 0.00 0.00 0.00 4.84
2814 14218 0.931702 TGTTTGTGGTCGTAGCGTTG 59.068 50.000 0.00 0.00 0.00 4.10
2815 14219 0.932399 GTTTGTGGTCGTAGCGTTGT 59.068 50.000 0.00 0.00 0.00 3.32
2816 14220 1.071041 GTTTGTGGTCGTAGCGTTGTC 60.071 52.381 0.00 0.00 0.00 3.18
2817 14221 0.935831 TTGTGGTCGTAGCGTTGTCG 60.936 55.000 0.00 0.00 40.37 4.35
2818 14222 1.370900 GTGGTCGTAGCGTTGTCGT 60.371 57.895 0.00 0.00 39.49 4.34
2819 14223 1.370778 TGGTCGTAGCGTTGTCGTG 60.371 57.895 0.00 0.00 39.49 4.35
2820 14224 1.370900 GGTCGTAGCGTTGTCGTGT 60.371 57.895 0.00 0.00 39.49 4.49
2821 14225 1.602877 GGTCGTAGCGTTGTCGTGTG 61.603 60.000 0.00 0.00 39.49 3.82
2822 14226 0.658244 GTCGTAGCGTTGTCGTGTGA 60.658 55.000 0.00 0.00 39.49 3.58
2823 14227 0.029167 TCGTAGCGTTGTCGTGTGAA 59.971 50.000 0.00 0.00 39.49 3.18
2824 14228 0.158096 CGTAGCGTTGTCGTGTGAAC 59.842 55.000 0.00 0.00 39.49 3.18
2825 14229 1.202203 GTAGCGTTGTCGTGTGAACA 58.798 50.000 0.00 0.00 39.49 3.18
2826 14230 1.189446 GTAGCGTTGTCGTGTGAACAG 59.811 52.381 0.00 0.00 39.49 3.16
2920 14349 2.307496 AGTGGTGAATGGGCATGAAA 57.693 45.000 0.00 0.00 0.00 2.69
2921 14350 2.173519 AGTGGTGAATGGGCATGAAAG 58.826 47.619 0.00 0.00 0.00 2.62
2922 14351 0.896923 TGGTGAATGGGCATGAAAGC 59.103 50.000 0.00 0.00 0.00 3.51
2923 14352 0.896923 GGTGAATGGGCATGAAAGCA 59.103 50.000 0.00 0.00 35.83 3.91
2924 14353 1.134907 GGTGAATGGGCATGAAAGCAG 60.135 52.381 0.00 0.00 35.83 4.24
2925 14354 1.820519 GTGAATGGGCATGAAAGCAGA 59.179 47.619 0.00 0.00 35.83 4.26
2926 14355 1.820519 TGAATGGGCATGAAAGCAGAC 59.179 47.619 0.00 0.00 35.83 3.51
2927 14356 1.820519 GAATGGGCATGAAAGCAGACA 59.179 47.619 0.00 0.00 35.83 3.41
2928 14357 1.471119 ATGGGCATGAAAGCAGACAG 58.529 50.000 0.00 0.00 35.83 3.51
2929 14358 0.609957 TGGGCATGAAAGCAGACAGG 60.610 55.000 0.00 0.00 35.83 4.00
2930 14359 1.509923 GGCATGAAAGCAGACAGGC 59.490 57.895 0.00 0.00 41.93 4.85
2932 14361 1.679944 GGCATGAAAGCAGACAGGCTA 60.680 52.381 0.00 0.00 45.07 3.93
2970 14412 0.249447 GGTTGTTGCTTGCTGTTCCC 60.249 55.000 0.00 0.00 0.00 3.97
2975 14417 1.615392 GTTGCTTGCTGTTCCCTGAAT 59.385 47.619 0.00 0.00 0.00 2.57
3014 14456 8.197592 TCCTCTATGTTTACCTGTAAGAACAA 57.802 34.615 0.00 0.00 34.49 2.83
3048 14494 5.995282 CAGTTTGTAGGTGTGTATTCTTGGA 59.005 40.000 0.00 0.00 0.00 3.53
3127 14573 9.968743 GAATAACACTACAACTACATAAACAGC 57.031 33.333 0.00 0.00 0.00 4.40
3128 14574 9.720769 AATAACACTACAACTACATAAACAGCT 57.279 29.630 0.00 0.00 0.00 4.24
3130 14576 8.530269 AACACTACAACTACATAAACAGCTAC 57.470 34.615 0.00 0.00 0.00 3.58
3131 14577 6.805271 ACACTACAACTACATAAACAGCTACG 59.195 38.462 0.00 0.00 0.00 3.51
3132 14578 6.805271 CACTACAACTACATAAACAGCTACGT 59.195 38.462 0.00 0.00 0.00 3.57
3133 14579 7.964559 CACTACAACTACATAAACAGCTACGTA 59.035 37.037 0.00 0.00 0.00 3.57
3134 14580 8.180267 ACTACAACTACATAAACAGCTACGTAG 58.820 37.037 18.47 18.47 34.03 3.51
3136 14582 6.805271 ACAACTACATAAACAGCTACGTAGTG 59.195 38.462 22.98 20.02 45.73 2.74
3137 14583 6.748333 ACTACATAAACAGCTACGTAGTGA 57.252 37.500 22.98 6.10 45.73 3.41
3138 14584 7.330900 ACTACATAAACAGCTACGTAGTGAT 57.669 36.000 22.98 12.02 45.73 3.06
3139 14585 8.442632 ACTACATAAACAGCTACGTAGTGATA 57.557 34.615 22.98 16.31 45.73 2.15
3140 14586 8.341173 ACTACATAAACAGCTACGTAGTGATAC 58.659 37.037 22.98 6.74 45.73 2.24
3141 14587 7.092137 ACATAAACAGCTACGTAGTGATACA 57.908 36.000 22.98 6.49 45.73 2.29
3142 14588 7.713750 ACATAAACAGCTACGTAGTGATACAT 58.286 34.615 22.98 8.37 45.73 2.29
3143 14589 8.843262 ACATAAACAGCTACGTAGTGATACATA 58.157 33.333 22.98 9.14 45.73 2.29
3144 14590 9.673454 CATAAACAGCTACGTAGTGATACATAA 57.327 33.333 22.98 2.86 45.73 1.90
3147 14593 9.595823 AAACAGCTACGTAGTGATACATAAATT 57.404 29.630 22.98 5.58 45.73 1.82
3148 14594 9.595823 AACAGCTACGTAGTGATACATAAATTT 57.404 29.630 22.98 0.00 45.73 1.82
3149 14595 9.245962 ACAGCTACGTAGTGATACATAAATTTC 57.754 33.333 22.98 1.47 45.73 2.17
3150 14596 8.700644 CAGCTACGTAGTGATACATAAATTTCC 58.299 37.037 22.98 1.10 45.73 3.13
3151 14597 8.639761 AGCTACGTAGTGATACATAAATTTCCT 58.360 33.333 22.98 3.37 45.73 3.36
3152 14598 9.903682 GCTACGTAGTGATACATAAATTTCCTA 57.096 33.333 22.98 0.00 45.73 2.94
3169 14615 6.809976 TTTCCTAATCTAACCTTCTCTCCC 57.190 41.667 0.00 0.00 0.00 4.30
3170 14616 4.817286 TCCTAATCTAACCTTCTCTCCCC 58.183 47.826 0.00 0.00 0.00 4.81
3171 14617 3.904965 CCTAATCTAACCTTCTCTCCCCC 59.095 52.174 0.00 0.00 0.00 5.40
3172 14618 3.805360 AATCTAACCTTCTCTCCCCCT 57.195 47.619 0.00 0.00 0.00 4.79
3173 14619 2.552093 TCTAACCTTCTCTCCCCCTG 57.448 55.000 0.00 0.00 0.00 4.45
3174 14620 2.008400 TCTAACCTTCTCTCCCCCTGA 58.992 52.381 0.00 0.00 0.00 3.86
3175 14621 2.592512 TCTAACCTTCTCTCCCCCTGAT 59.407 50.000 0.00 0.00 0.00 2.90
3176 14622 2.367947 AACCTTCTCTCCCCCTGATT 57.632 50.000 0.00 0.00 0.00 2.57
3177 14623 2.367947 ACCTTCTCTCCCCCTGATTT 57.632 50.000 0.00 0.00 0.00 2.17
3178 14624 2.648838 ACCTTCTCTCCCCCTGATTTT 58.351 47.619 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 51 2.555199 GAGACCTGTGATTGAATCCCG 58.445 52.381 2.26 0.00 0.00 5.14
203 215 6.430000 ACGTCTTATTTGTAACAAATCCAGCT 59.570 34.615 0.00 0.00 0.00 4.24
222 240 8.801882 TTTGAAGATAATATTGGGAACGTCTT 57.198 30.769 0.00 0.00 0.00 3.01
298 317 1.223187 AAAACCGTGTTGAGGCTACG 58.777 50.000 0.64 0.64 37.55 3.51
376 395 6.204882 GGTTTGCTAAACTCTACATGTTCAGT 59.795 38.462 2.30 3.37 41.14 3.41
386 405 5.883673 ACACTGTTTGGTTTGCTAAACTCTA 59.116 36.000 10.28 0.00 43.60 2.43
433 452 1.202336 GCTGCCTTCATTGTACATGCC 60.202 52.381 0.00 0.00 0.00 4.40
434 453 1.473677 TGCTGCCTTCATTGTACATGC 59.526 47.619 0.00 0.00 0.00 4.06
435 454 2.751259 AGTGCTGCCTTCATTGTACATG 59.249 45.455 0.00 0.00 0.00 3.21
437 456 2.566833 AGTGCTGCCTTCATTGTACA 57.433 45.000 0.00 0.00 0.00 2.90
439 458 4.220693 ACATAGTGCTGCCTTCATTGTA 57.779 40.909 0.00 0.00 0.00 2.41
441 460 3.003068 GCTACATAGTGCTGCCTTCATTG 59.997 47.826 0.00 0.00 0.00 2.82
442 461 3.118112 AGCTACATAGTGCTGCCTTCATT 60.118 43.478 0.00 0.00 38.21 2.57
443 462 2.437281 AGCTACATAGTGCTGCCTTCAT 59.563 45.455 0.00 0.00 38.21 2.57
444 463 1.833630 AGCTACATAGTGCTGCCTTCA 59.166 47.619 0.00 0.00 38.21 3.02
445 464 2.611225 AGCTACATAGTGCTGCCTTC 57.389 50.000 0.00 0.00 38.21 3.46
451 470 0.982852 TGGGGCAGCTACATAGTGCT 60.983 55.000 10.97 0.00 40.54 4.40
452 471 0.109342 ATGGGGCAGCTACATAGTGC 59.891 55.000 0.00 5.44 36.42 4.40
453 472 1.271054 GGATGGGGCAGCTACATAGTG 60.271 57.143 2.89 0.00 0.00 2.74
454 473 1.059913 GGATGGGGCAGCTACATAGT 58.940 55.000 2.89 0.00 0.00 2.12
455 474 0.036952 CGGATGGGGCAGCTACATAG 60.037 60.000 2.89 0.00 0.00 2.23
456 475 2.057830 CGGATGGGGCAGCTACATA 58.942 57.895 2.89 0.00 0.00 2.29
457 476 2.831770 CGGATGGGGCAGCTACAT 59.168 61.111 2.55 2.55 0.00 2.29
458 477 4.175337 GCGGATGGGGCAGCTACA 62.175 66.667 0.00 0.00 0.00 2.74
459 478 4.937431 GGCGGATGGGGCAGCTAC 62.937 72.222 0.00 0.00 0.00 3.58
463 482 3.118768 TACATGGCGGATGGGGCAG 62.119 63.158 0.00 0.00 46.24 4.85
465 484 2.281761 CTACATGGCGGATGGGGC 60.282 66.667 0.00 0.00 36.23 5.80
466 485 1.994885 AACCTACATGGCGGATGGGG 61.995 60.000 9.26 4.02 40.22 4.96
467 486 0.819259 CAACCTACATGGCGGATGGG 60.819 60.000 9.26 0.00 40.22 4.00
468 487 0.180171 TCAACCTACATGGCGGATGG 59.820 55.000 9.26 0.00 40.22 3.51
469 488 1.138859 TCTCAACCTACATGGCGGATG 59.861 52.381 9.26 7.77 40.22 3.51
470 489 1.139058 GTCTCAACCTACATGGCGGAT 59.861 52.381 9.26 0.00 40.22 4.18
471 490 0.535335 GTCTCAACCTACATGGCGGA 59.465 55.000 9.26 0.00 40.22 5.54
472 491 0.462047 GGTCTCAACCTACATGGCGG 60.462 60.000 0.00 0.00 42.80 6.13
473 492 0.249120 TGGTCTCAACCTACATGGCG 59.751 55.000 0.00 0.00 46.60 5.69
474 493 1.279271 AGTGGTCTCAACCTACATGGC 59.721 52.381 0.00 0.00 46.60 4.40
475 494 2.303022 ACAGTGGTCTCAACCTACATGG 59.697 50.000 0.00 0.00 46.60 3.66
476 495 3.685139 ACAGTGGTCTCAACCTACATG 57.315 47.619 0.00 0.00 46.60 3.21
477 496 7.676683 ATTATACAGTGGTCTCAACCTACAT 57.323 36.000 0.00 0.00 46.60 2.29
478 497 7.490657 AATTATACAGTGGTCTCAACCTACA 57.509 36.000 0.00 0.00 46.60 2.74
479 498 8.788325 AAAATTATACAGTGGTCTCAACCTAC 57.212 34.615 0.00 0.00 46.60 3.18
480 499 9.444600 GAAAAATTATACAGTGGTCTCAACCTA 57.555 33.333 0.00 0.00 46.60 3.08
481 500 8.164070 AGAAAAATTATACAGTGGTCTCAACCT 58.836 33.333 0.00 0.00 46.60 3.50
482 501 8.336801 AGAAAAATTATACAGTGGTCTCAACC 57.663 34.615 0.00 0.00 46.66 3.77
483 502 9.220767 AGAGAAAAATTATACAGTGGTCTCAAC 57.779 33.333 0.00 0.00 33.09 3.18
484 503 9.436957 GAGAGAAAAATTATACAGTGGTCTCAA 57.563 33.333 0.00 0.00 33.09 3.02
485 504 8.816894 AGAGAGAAAAATTATACAGTGGTCTCA 58.183 33.333 0.00 0.00 33.09 3.27
486 505 9.308318 GAGAGAGAAAAATTATACAGTGGTCTC 57.692 37.037 0.00 0.00 0.00 3.36
487 506 8.261522 GGAGAGAGAAAAATTATACAGTGGTCT 58.738 37.037 0.00 0.00 0.00 3.85
488 507 7.496263 GGGAGAGAGAAAAATTATACAGTGGTC 59.504 40.741 0.00 0.00 0.00 4.02
489 508 7.037586 TGGGAGAGAGAAAAATTATACAGTGGT 60.038 37.037 0.00 0.00 0.00 4.16
490 509 7.338710 TGGGAGAGAGAAAAATTATACAGTGG 58.661 38.462 0.00 0.00 0.00 4.00
491 510 8.792830 TTGGGAGAGAGAAAAATTATACAGTG 57.207 34.615 0.00 0.00 0.00 3.66
492 511 9.454859 CTTTGGGAGAGAGAAAAATTATACAGT 57.545 33.333 0.00 0.00 0.00 3.55
493 512 8.401709 GCTTTGGGAGAGAGAAAAATTATACAG 58.598 37.037 0.00 0.00 0.00 2.74
494 513 7.888021 TGCTTTGGGAGAGAGAAAAATTATACA 59.112 33.333 0.00 0.00 0.00 2.29
495 514 8.281212 TGCTTTGGGAGAGAGAAAAATTATAC 57.719 34.615 0.00 0.00 0.00 1.47
496 515 7.067494 GCTGCTTTGGGAGAGAGAAAAATTATA 59.933 37.037 0.00 0.00 32.36 0.98
497 516 6.127507 GCTGCTTTGGGAGAGAGAAAAATTAT 60.128 38.462 0.00 0.00 32.36 1.28
498 517 5.183904 GCTGCTTTGGGAGAGAGAAAAATTA 59.816 40.000 0.00 0.00 32.36 1.40
499 518 4.021632 GCTGCTTTGGGAGAGAGAAAAATT 60.022 41.667 0.00 0.00 32.36 1.82
500 519 3.509184 GCTGCTTTGGGAGAGAGAAAAAT 59.491 43.478 0.00 0.00 32.36 1.82
501 520 2.887152 GCTGCTTTGGGAGAGAGAAAAA 59.113 45.455 0.00 0.00 32.36 1.94
502 521 2.508526 GCTGCTTTGGGAGAGAGAAAA 58.491 47.619 0.00 0.00 32.36 2.29
503 522 1.271597 GGCTGCTTTGGGAGAGAGAAA 60.272 52.381 0.00 0.00 32.36 2.52
504 523 0.326264 GGCTGCTTTGGGAGAGAGAA 59.674 55.000 0.00 0.00 32.36 2.87
505 524 0.837691 TGGCTGCTTTGGGAGAGAGA 60.838 55.000 0.00 0.00 32.36 3.10
506 525 0.255318 ATGGCTGCTTTGGGAGAGAG 59.745 55.000 0.00 0.00 32.36 3.20
507 526 1.487976 CTATGGCTGCTTTGGGAGAGA 59.512 52.381 0.00 0.00 32.36 3.10
508 527 1.964552 CTATGGCTGCTTTGGGAGAG 58.035 55.000 0.00 0.00 32.36 3.20
509 528 0.107017 GCTATGGCTGCTTTGGGAGA 60.107 55.000 0.00 0.00 32.36 3.71
510 529 2.412605 GCTATGGCTGCTTTGGGAG 58.587 57.895 0.00 0.00 35.22 4.30
511 530 4.664062 GCTATGGCTGCTTTGGGA 57.336 55.556 0.00 0.00 35.22 4.37
522 541 2.203209 GGTCCGGGCAAGCTATGG 60.203 66.667 9.07 0.00 0.00 2.74
523 542 2.588877 CGGTCCGGGCAAGCTATG 60.589 66.667 9.07 0.00 0.00 2.23
524 543 4.547367 GCGGTCCGGGCAAGCTAT 62.547 66.667 17.00 0.00 0.00 2.97
533 552 4.530857 GATGGAGGTGCGGTCCGG 62.531 72.222 14.38 0.00 36.82 5.14
534 553 1.744320 TATGATGGAGGTGCGGTCCG 61.744 60.000 6.99 6.99 36.82 4.79
535 554 0.687354 ATATGATGGAGGTGCGGTCC 59.313 55.000 0.00 0.00 34.31 4.46
536 555 2.550830 AATATGATGGAGGTGCGGTC 57.449 50.000 0.00 0.00 0.00 4.79
537 556 2.439507 AGAAATATGATGGAGGTGCGGT 59.560 45.455 0.00 0.00 0.00 5.68
538 557 3.131709 AGAAATATGATGGAGGTGCGG 57.868 47.619 0.00 0.00 0.00 5.69
539 558 4.153117 GCTAAGAAATATGATGGAGGTGCG 59.847 45.833 0.00 0.00 0.00 5.34
540 559 5.065914 TGCTAAGAAATATGATGGAGGTGC 58.934 41.667 0.00 0.00 0.00 5.01
541 560 7.166851 AGATGCTAAGAAATATGATGGAGGTG 58.833 38.462 0.00 0.00 0.00 4.00
542 561 7.237263 AGAGATGCTAAGAAATATGATGGAGGT 59.763 37.037 0.00 0.00 0.00 3.85
543 562 7.622713 AGAGATGCTAAGAAATATGATGGAGG 58.377 38.462 0.00 0.00 0.00 4.30
544 563 8.533657 AGAGAGATGCTAAGAAATATGATGGAG 58.466 37.037 0.00 0.00 0.00 3.86
545 564 8.433249 AGAGAGATGCTAAGAAATATGATGGA 57.567 34.615 0.00 0.00 0.00 3.41
554 573 9.220767 GGAAAAAGTAAGAGAGATGCTAAGAAA 57.779 33.333 0.00 0.00 0.00 2.52
555 574 8.598041 AGGAAAAAGTAAGAGAGATGCTAAGAA 58.402 33.333 0.00 0.00 0.00 2.52
556 575 8.140112 AGGAAAAAGTAAGAGAGATGCTAAGA 57.860 34.615 0.00 0.00 0.00 2.10
557 576 8.785329 AAGGAAAAAGTAAGAGAGATGCTAAG 57.215 34.615 0.00 0.00 0.00 2.18
559 578 9.654663 GTAAAGGAAAAAGTAAGAGAGATGCTA 57.345 33.333 0.00 0.00 0.00 3.49
560 579 8.157476 TGTAAAGGAAAAAGTAAGAGAGATGCT 58.843 33.333 0.00 0.00 0.00 3.79
561 580 8.231161 GTGTAAAGGAAAAAGTAAGAGAGATGC 58.769 37.037 0.00 0.00 0.00 3.91
562 581 9.273016 TGTGTAAAGGAAAAAGTAAGAGAGATG 57.727 33.333 0.00 0.00 0.00 2.90
564 583 9.273016 CATGTGTAAAGGAAAAAGTAAGAGAGA 57.727 33.333 0.00 0.00 0.00 3.10
565 584 8.017946 GCATGTGTAAAGGAAAAAGTAAGAGAG 58.982 37.037 0.00 0.00 0.00 3.20
566 585 7.500892 TGCATGTGTAAAGGAAAAAGTAAGAGA 59.499 33.333 0.00 0.00 0.00 3.10
567 586 7.648142 TGCATGTGTAAAGGAAAAAGTAAGAG 58.352 34.615 0.00 0.00 0.00 2.85
568 587 7.575414 TGCATGTGTAAAGGAAAAAGTAAGA 57.425 32.000 0.00 0.00 0.00 2.10
569 588 8.081633 TGATGCATGTGTAAAGGAAAAAGTAAG 58.918 33.333 2.46 0.00 0.00 2.34
570 589 7.865385 GTGATGCATGTGTAAAGGAAAAAGTAA 59.135 33.333 2.46 0.00 0.00 2.24
571 590 7.013750 TGTGATGCATGTGTAAAGGAAAAAGTA 59.986 33.333 2.46 0.00 0.00 2.24
572 591 6.183360 TGTGATGCATGTGTAAAGGAAAAAGT 60.183 34.615 2.46 0.00 0.00 2.66
573 592 6.215121 TGTGATGCATGTGTAAAGGAAAAAG 58.785 36.000 2.46 0.00 0.00 2.27
574 593 6.154203 TGTGATGCATGTGTAAAGGAAAAA 57.846 33.333 2.46 0.00 0.00 1.94
575 594 5.781210 TGTGATGCATGTGTAAAGGAAAA 57.219 34.783 2.46 0.00 0.00 2.29
576 595 5.711506 AGATGTGATGCATGTGTAAAGGAAA 59.288 36.000 2.46 0.00 38.06 3.13
577 596 5.255687 AGATGTGATGCATGTGTAAAGGAA 58.744 37.500 2.46 0.00 38.06 3.36
578 597 4.847198 AGATGTGATGCATGTGTAAAGGA 58.153 39.130 2.46 0.00 38.06 3.36
579 598 4.880120 AGAGATGTGATGCATGTGTAAAGG 59.120 41.667 2.46 0.00 38.06 3.11
580 599 5.583457 TGAGAGATGTGATGCATGTGTAAAG 59.417 40.000 2.46 0.00 38.06 1.85
581 600 5.352293 GTGAGAGATGTGATGCATGTGTAAA 59.648 40.000 2.46 0.00 38.06 2.01
582 601 4.872124 GTGAGAGATGTGATGCATGTGTAA 59.128 41.667 2.46 0.00 38.06 2.41
583 602 4.081531 TGTGAGAGATGTGATGCATGTGTA 60.082 41.667 2.46 0.00 38.06 2.90
584 603 3.268330 GTGAGAGATGTGATGCATGTGT 58.732 45.455 2.46 0.00 38.06 3.72
585 604 3.267483 TGTGAGAGATGTGATGCATGTG 58.733 45.455 2.46 0.00 38.06 3.21
586 605 3.622166 TGTGAGAGATGTGATGCATGT 57.378 42.857 2.46 0.00 38.06 3.21
587 606 3.242316 CGTTGTGAGAGATGTGATGCATG 60.242 47.826 2.46 0.00 38.06 4.06
588 607 2.934553 CGTTGTGAGAGATGTGATGCAT 59.065 45.455 0.00 0.00 41.24 3.96
589 608 2.289010 ACGTTGTGAGAGATGTGATGCA 60.289 45.455 0.00 0.00 0.00 3.96
590 609 2.093310 CACGTTGTGAGAGATGTGATGC 59.907 50.000 0.00 0.00 35.23 3.91
591 610 3.320626 ACACGTTGTGAGAGATGTGATG 58.679 45.455 3.61 0.00 36.96 3.07
592 611 3.667497 ACACGTTGTGAGAGATGTGAT 57.333 42.857 3.61 0.00 36.96 3.06
593 612 3.068165 AGAACACGTTGTGAGAGATGTGA 59.932 43.478 3.61 0.00 36.96 3.58
594 613 3.384668 AGAACACGTTGTGAGAGATGTG 58.615 45.455 3.61 0.00 36.96 3.21
595 614 3.735237 AGAACACGTTGTGAGAGATGT 57.265 42.857 3.61 0.00 36.96 3.06
596 615 4.302455 AGAAGAACACGTTGTGAGAGATG 58.698 43.478 3.61 0.00 36.96 2.90
597 616 4.592485 AGAAGAACACGTTGTGAGAGAT 57.408 40.909 3.61 0.00 36.96 2.75
598 617 4.386867 AAGAAGAACACGTTGTGAGAGA 57.613 40.909 3.61 0.00 36.96 3.10
599 618 5.470845 AAAAGAAGAACACGTTGTGAGAG 57.529 39.130 3.61 0.00 36.96 3.20
600 619 5.873179 AAAAAGAAGAACACGTTGTGAGA 57.127 34.783 3.61 0.00 36.96 3.27
621 640 9.388506 TCATCCAAAAAGTTGAAATAAAGCAAA 57.611 25.926 0.00 0.00 36.83 3.68
622 641 8.954950 TCATCCAAAAAGTTGAAATAAAGCAA 57.045 26.923 0.00 0.00 36.83 3.91
623 642 8.954950 TTCATCCAAAAAGTTGAAATAAAGCA 57.045 26.923 0.00 0.00 36.83 3.91
624 643 8.011673 GCTTCATCCAAAAAGTTGAAATAAAGC 58.988 33.333 0.00 0.00 36.83 3.51
625 644 9.044150 TGCTTCATCCAAAAAGTTGAAATAAAG 57.956 29.630 0.00 0.00 36.83 1.85
626 645 8.825745 GTGCTTCATCCAAAAAGTTGAAATAAA 58.174 29.630 0.00 0.00 36.83 1.40
627 646 7.440856 GGTGCTTCATCCAAAAAGTTGAAATAA 59.559 33.333 0.00 0.00 36.83 1.40
628 647 6.928492 GGTGCTTCATCCAAAAAGTTGAAATA 59.072 34.615 0.00 0.00 36.83 1.40
629 648 5.759763 GGTGCTTCATCCAAAAAGTTGAAAT 59.240 36.000 0.00 0.00 36.83 2.17
630 649 5.115480 GGTGCTTCATCCAAAAAGTTGAAA 58.885 37.500 0.00 0.00 36.83 2.69
631 650 4.161189 TGGTGCTTCATCCAAAAAGTTGAA 59.839 37.500 0.00 0.00 36.83 2.69
632 651 3.703556 TGGTGCTTCATCCAAAAAGTTGA 59.296 39.130 0.00 0.00 36.83 3.18
633 652 4.053295 CTGGTGCTTCATCCAAAAAGTTG 58.947 43.478 0.00 0.00 33.06 3.16
634 653 3.706086 ACTGGTGCTTCATCCAAAAAGTT 59.294 39.130 0.00 0.00 33.06 2.66
635 654 3.299503 ACTGGTGCTTCATCCAAAAAGT 58.700 40.909 0.00 0.00 33.06 2.66
636 655 3.571401 AGACTGGTGCTTCATCCAAAAAG 59.429 43.478 0.00 0.00 33.06 2.27
637 656 3.565307 AGACTGGTGCTTCATCCAAAAA 58.435 40.909 0.00 0.00 33.06 1.94
638 657 3.149196 GAGACTGGTGCTTCATCCAAAA 58.851 45.455 0.00 0.00 33.06 2.44
639 658 2.553028 GGAGACTGGTGCTTCATCCAAA 60.553 50.000 0.00 0.00 33.06 3.28
640 659 1.003580 GGAGACTGGTGCTTCATCCAA 59.996 52.381 0.00 0.00 33.06 3.53
641 660 0.615331 GGAGACTGGTGCTTCATCCA 59.385 55.000 0.00 0.00 0.00 3.41
642 661 0.908198 AGGAGACTGGTGCTTCATCC 59.092 55.000 0.00 0.00 41.13 3.51
643 662 1.830477 AGAGGAGACTGGTGCTTCATC 59.170 52.381 0.00 0.00 44.43 2.92
644 663 1.554160 CAGAGGAGACTGGTGCTTCAT 59.446 52.381 0.00 0.00 44.43 2.57
645 664 0.972134 CAGAGGAGACTGGTGCTTCA 59.028 55.000 0.00 0.00 44.43 3.02
646 665 0.972883 ACAGAGGAGACTGGTGCTTC 59.027 55.000 0.00 0.00 44.43 3.86
647 666 2.310779 TACAGAGGAGACTGGTGCTT 57.689 50.000 0.00 0.00 44.43 3.91
648 667 2.175202 CTTACAGAGGAGACTGGTGCT 58.825 52.381 0.00 0.00 44.43 4.40
649 668 2.171840 TCTTACAGAGGAGACTGGTGC 58.828 52.381 0.00 0.00 44.43 5.01
650 669 3.056465 GGTTCTTACAGAGGAGACTGGTG 60.056 52.174 0.00 0.00 44.43 4.17
651 670 3.166679 GGTTCTTACAGAGGAGACTGGT 58.833 50.000 0.00 0.00 44.43 4.00
652 671 2.498078 GGGTTCTTACAGAGGAGACTGG 59.502 54.545 0.00 0.00 44.43 4.00
653 672 2.164624 CGGGTTCTTACAGAGGAGACTG 59.835 54.545 0.00 0.00 44.43 3.51
654 673 5.587934 GAACGGGTTCTTACAGAGGAGACT 61.588 50.000 4.35 0.00 39.06 3.24
655 674 2.169330 ACGGGTTCTTACAGAGGAGAC 58.831 52.381 0.00 0.00 0.00 3.36
656 675 2.599408 ACGGGTTCTTACAGAGGAGA 57.401 50.000 0.00 0.00 0.00 3.71
657 676 2.094130 GGAACGGGTTCTTACAGAGGAG 60.094 54.545 11.02 0.00 39.45 3.69
658 677 1.897802 GGAACGGGTTCTTACAGAGGA 59.102 52.381 11.02 0.00 39.45 3.71
659 678 1.900486 AGGAACGGGTTCTTACAGAGG 59.100 52.381 11.02 0.00 39.45 3.69
660 679 2.826725 AGAGGAACGGGTTCTTACAGAG 59.173 50.000 11.02 0.00 39.45 3.35
661 680 2.824341 GAGAGGAACGGGTTCTTACAGA 59.176 50.000 11.02 0.00 39.45 3.41
662 681 2.826725 AGAGAGGAACGGGTTCTTACAG 59.173 50.000 11.02 0.00 39.45 2.74
663 682 2.885616 AGAGAGGAACGGGTTCTTACA 58.114 47.619 11.02 0.00 39.45 2.41
664 683 3.257624 TGAAGAGAGGAACGGGTTCTTAC 59.742 47.826 11.02 2.80 39.45 2.34
665 684 3.503365 TGAAGAGAGGAACGGGTTCTTA 58.497 45.455 11.02 0.00 39.45 2.10
666 685 2.326428 TGAAGAGAGGAACGGGTTCTT 58.674 47.619 11.02 3.74 39.45 2.52
667 686 2.011122 TGAAGAGAGGAACGGGTTCT 57.989 50.000 11.02 0.00 39.45 3.01
668 687 2.689646 CTTGAAGAGAGGAACGGGTTC 58.310 52.381 2.95 2.95 38.80 3.62
669 688 1.270893 GCTTGAAGAGAGGAACGGGTT 60.271 52.381 0.00 0.00 0.00 4.11
670 689 0.321996 GCTTGAAGAGAGGAACGGGT 59.678 55.000 0.00 0.00 0.00 5.28
671 690 0.321671 TGCTTGAAGAGAGGAACGGG 59.678 55.000 0.00 0.00 0.00 5.28
672 691 1.001406 AGTGCTTGAAGAGAGGAACGG 59.999 52.381 0.00 0.00 0.00 4.44
673 692 2.447244 AGTGCTTGAAGAGAGGAACG 57.553 50.000 0.00 0.00 0.00 3.95
674 693 3.258228 GCTAGTGCTTGAAGAGAGGAAC 58.742 50.000 0.00 0.00 36.03 3.62
675 694 3.601443 GCTAGTGCTTGAAGAGAGGAA 57.399 47.619 0.00 0.00 36.03 3.36
697 716 4.350816 TGATGTGGAAGAGAGAGGGAAAAA 59.649 41.667 0.00 0.00 0.00 1.94
698 717 3.909995 TGATGTGGAAGAGAGAGGGAAAA 59.090 43.478 0.00 0.00 0.00 2.29
699 718 3.261897 GTGATGTGGAAGAGAGAGGGAAA 59.738 47.826 0.00 0.00 0.00 3.13
700 719 2.834549 GTGATGTGGAAGAGAGAGGGAA 59.165 50.000 0.00 0.00 0.00 3.97
701 720 2.461695 GTGATGTGGAAGAGAGAGGGA 58.538 52.381 0.00 0.00 0.00 4.20
702 721 1.484240 GGTGATGTGGAAGAGAGAGGG 59.516 57.143 0.00 0.00 0.00 4.30
703 722 2.168106 CTGGTGATGTGGAAGAGAGAGG 59.832 54.545 0.00 0.00 0.00 3.69
704 723 2.418471 GCTGGTGATGTGGAAGAGAGAG 60.418 54.545 0.00 0.00 0.00 3.20
705 724 1.552337 GCTGGTGATGTGGAAGAGAGA 59.448 52.381 0.00 0.00 0.00 3.10
706 725 1.554160 AGCTGGTGATGTGGAAGAGAG 59.446 52.381 0.00 0.00 0.00 3.20
707 726 1.649321 AGCTGGTGATGTGGAAGAGA 58.351 50.000 0.00 0.00 0.00 3.10
708 727 2.486472 AAGCTGGTGATGTGGAAGAG 57.514 50.000 0.00 0.00 0.00 2.85
709 728 2.957402 AAAGCTGGTGATGTGGAAGA 57.043 45.000 0.00 0.00 0.00 2.87
710 729 3.152341 AGAAAAGCTGGTGATGTGGAAG 58.848 45.455 0.00 0.00 0.00 3.46
711 730 3.228188 AGAAAAGCTGGTGATGTGGAA 57.772 42.857 0.00 0.00 0.00 3.53
712 731 2.957402 AGAAAAGCTGGTGATGTGGA 57.043 45.000 0.00 0.00 0.00 4.02
713 732 3.379372 CCATAGAAAAGCTGGTGATGTGG 59.621 47.826 0.00 0.00 0.00 4.17
714 733 4.264253 TCCATAGAAAAGCTGGTGATGTG 58.736 43.478 0.00 0.00 0.00 3.21
715 734 4.521146 CTCCATAGAAAAGCTGGTGATGT 58.479 43.478 0.00 0.00 0.00 3.06
716 735 3.314635 GCTCCATAGAAAAGCTGGTGATG 59.685 47.826 0.00 0.00 33.23 3.07
717 736 3.054139 TGCTCCATAGAAAAGCTGGTGAT 60.054 43.478 0.00 0.00 36.96 3.06
718 737 2.305635 TGCTCCATAGAAAAGCTGGTGA 59.694 45.455 0.00 0.00 36.96 4.02
719 738 2.681848 CTGCTCCATAGAAAAGCTGGTG 59.318 50.000 0.00 0.00 36.96 4.17
720 739 2.943199 GCTGCTCCATAGAAAAGCTGGT 60.943 50.000 0.00 0.00 36.96 4.00
721 740 1.674962 GCTGCTCCATAGAAAAGCTGG 59.325 52.381 0.00 0.00 36.96 4.85
722 741 2.355132 CTGCTGCTCCATAGAAAAGCTG 59.645 50.000 0.00 0.00 36.96 4.24
723 742 2.026449 ACTGCTGCTCCATAGAAAAGCT 60.026 45.455 0.00 0.00 36.96 3.74
724 743 2.354199 GACTGCTGCTCCATAGAAAAGC 59.646 50.000 0.00 0.00 36.56 3.51
725 744 2.941720 GGACTGCTGCTCCATAGAAAAG 59.058 50.000 0.00 0.00 0.00 2.27
726 745 2.305635 TGGACTGCTGCTCCATAGAAAA 59.694 45.455 6.53 0.00 32.52 2.29
727 746 1.908619 TGGACTGCTGCTCCATAGAAA 59.091 47.619 6.53 0.00 32.52 2.52
728 747 1.571955 TGGACTGCTGCTCCATAGAA 58.428 50.000 6.53 0.00 32.52 2.10
729 748 1.208052 GTTGGACTGCTGCTCCATAGA 59.792 52.381 10.95 0.00 37.65 1.98
730 749 1.209019 AGTTGGACTGCTGCTCCATAG 59.791 52.381 10.95 0.00 37.65 2.23
731 750 1.279496 AGTTGGACTGCTGCTCCATA 58.721 50.000 10.95 1.34 37.65 2.74
732 751 0.403271 AAGTTGGACTGCTGCTCCAT 59.597 50.000 10.95 0.00 37.65 3.41
733 752 0.535780 CAAGTTGGACTGCTGCTCCA 60.536 55.000 6.53 6.53 35.91 3.86
734 753 1.239968 CCAAGTTGGACTGCTGCTCC 61.240 60.000 17.60 0.51 40.96 4.70
735 754 0.250467 TCCAAGTTGGACTGCTGCTC 60.250 55.000 21.05 0.00 42.67 4.26
736 755 0.250640 CTCCAAGTTGGACTGCTGCT 60.251 55.000 21.05 0.00 42.67 4.24
737 756 1.860484 GCTCCAAGTTGGACTGCTGC 61.860 60.000 21.05 17.64 42.67 5.25
738 757 0.535780 TGCTCCAAGTTGGACTGCTG 60.536 55.000 27.29 17.14 42.67 4.41
739 758 0.403271 ATGCTCCAAGTTGGACTGCT 59.597 50.000 27.29 15.54 42.67 4.24
740 759 1.068055 CAATGCTCCAAGTTGGACTGC 60.068 52.381 21.05 22.21 42.67 4.40
741 760 1.542915 CCAATGCTCCAAGTTGGACTG 59.457 52.381 21.05 13.23 42.67 3.51
742 761 1.915141 CCAATGCTCCAAGTTGGACT 58.085 50.000 21.05 5.82 42.67 3.85
743 762 0.244721 GCCAATGCTCCAAGTTGGAC 59.755 55.000 21.05 16.94 42.67 4.02
744 763 0.899717 GGCCAATGCTCCAAGTTGGA 60.900 55.000 23.23 23.23 45.98 3.53
745 764 1.186917 TGGCCAATGCTCCAAGTTGG 61.187 55.000 16.36 16.36 44.06 3.77
746 765 0.899720 ATGGCCAATGCTCCAAGTTG 59.100 50.000 10.96 0.00 35.75 3.16
747 766 0.899720 CATGGCCAATGCTCCAAGTT 59.100 50.000 10.96 0.00 35.75 2.66
748 767 2.587080 CATGGCCAATGCTCCAAGT 58.413 52.632 10.96 0.00 35.75 3.16
760 779 2.695285 GCTTAAGCTAAGGGCATGGCC 61.695 57.143 30.26 30.26 44.79 5.36
761 780 0.670706 GCTTAAGCTAAGGGCATGGC 59.329 55.000 20.38 11.56 44.79 4.40
762 781 2.057137 TGCTTAAGCTAAGGGCATGG 57.943 50.000 26.90 0.00 44.79 3.66
763 782 3.633525 TCAATGCTTAAGCTAAGGGCATG 59.366 43.478 26.90 13.71 41.85 4.06
764 783 3.887716 CTCAATGCTTAAGCTAAGGGCAT 59.112 43.478 26.90 9.44 44.09 4.40
765 784 3.282021 CTCAATGCTTAAGCTAAGGGCA 58.718 45.455 26.90 7.37 44.79 5.36
766 785 2.033927 GCTCAATGCTTAAGCTAAGGGC 59.966 50.000 26.90 21.88 42.66 5.19
767 786 3.978718 GCTCAATGCTTAAGCTAAGGG 57.021 47.619 26.90 16.87 42.66 3.95
779 798 3.243002 GGAAGCAATAGACAGCTCAATGC 60.243 47.826 0.00 0.00 40.90 3.56
780 799 3.943381 TGGAAGCAATAGACAGCTCAATG 59.057 43.478 0.00 0.00 40.90 2.82
803 3372 2.358247 CCGTTTGGTGGACTCGGG 60.358 66.667 0.00 0.00 37.92 5.14
1098 3837 5.292101 GTCTCTCTCTTCTTTCTCTCTCTCG 59.708 48.000 0.00 0.00 0.00 4.04
1368 4306 2.616842 TCAGAACGAAGGCAAAGAAACC 59.383 45.455 0.00 0.00 0.00 3.27
1723 4731 0.034896 CGGTTGTACCTCAGCACCTT 59.965 55.000 0.00 0.00 35.66 3.50
1724 4732 1.671742 CGGTTGTACCTCAGCACCT 59.328 57.895 0.00 0.00 35.66 4.00
1730 4738 2.845752 GATGCGGCGGTTGTACCTCA 62.846 60.000 9.78 0.00 35.66 3.86
1882 5385 0.454600 CACTACCACGACGGCACTAT 59.545 55.000 0.00 0.00 39.03 2.12
1924 5439 1.270358 ACAAGGCGTCTCTCAAACTCC 60.270 52.381 0.00 0.00 0.00 3.85
1929 5444 2.224281 ACATCAACAAGGCGTCTCTCAA 60.224 45.455 0.00 0.00 0.00 3.02
1973 5498 3.311322 ACGATCAACGAAGCAAAACAAGA 59.689 39.130 0.00 0.00 45.77 3.02
2004 5529 2.158204 ACCACCAGACCACTACCTACTT 60.158 50.000 0.00 0.00 0.00 2.24
2113 5645 7.284261 TCGTCATATGCCAAATTTGAGGAAATA 59.716 33.333 19.86 9.46 31.18 1.40
2137 5690 3.624326 TTTCAGCACCAAATCAGTTCG 57.376 42.857 0.00 0.00 0.00 3.95
2217 5944 3.066900 TGATAGACAGGCGAAACTAGCTC 59.933 47.826 0.00 0.00 34.52 4.09
2221 6106 3.321111 GGGATGATAGACAGGCGAAACTA 59.679 47.826 0.00 0.00 0.00 2.24
2222 6107 2.103263 GGGATGATAGACAGGCGAAACT 59.897 50.000 0.00 0.00 0.00 2.66
2223 6108 2.103263 AGGGATGATAGACAGGCGAAAC 59.897 50.000 0.00 0.00 0.00 2.78
2224 6109 2.365617 GAGGGATGATAGACAGGCGAAA 59.634 50.000 0.00 0.00 0.00 3.46
2225 6110 1.964223 GAGGGATGATAGACAGGCGAA 59.036 52.381 0.00 0.00 0.00 4.70
2226 6111 1.621992 GAGGGATGATAGACAGGCGA 58.378 55.000 0.00 0.00 0.00 5.54
2227 6112 0.242286 CGAGGGATGATAGACAGGCG 59.758 60.000 0.00 0.00 0.00 5.52
2228 6113 1.333177 ACGAGGGATGATAGACAGGC 58.667 55.000 0.00 0.00 0.00 4.85
2229 6114 3.639094 AGAAACGAGGGATGATAGACAGG 59.361 47.826 0.00 0.00 0.00 4.00
2239 6125 5.992217 GCAATACAGATAAGAAACGAGGGAT 59.008 40.000 0.00 0.00 0.00 3.85
2241 6127 5.360591 AGCAATACAGATAAGAAACGAGGG 58.639 41.667 0.00 0.00 0.00 4.30
2249 6135 9.672673 AGAAAGCTTAAAGCAATACAGATAAGA 57.327 29.630 0.00 0.00 45.56 2.10
2250 6136 9.713740 CAGAAAGCTTAAAGCAATACAGATAAG 57.286 33.333 0.00 0.00 45.56 1.73
2252 6138 8.792830 ACAGAAAGCTTAAAGCAATACAGATA 57.207 30.769 0.00 0.00 45.56 1.98
2321 7256 0.395173 AACTGCCCGTTCACCAACTT 60.395 50.000 0.00 0.00 0.00 2.66
2376 8960 9.341078 ACAAAAATTCAAGGATAAGCACAAAAT 57.659 25.926 0.00 0.00 0.00 1.82
2433 9963 7.054491 ACTCAAGGATAAGCACACAAAATTT 57.946 32.000 0.00 0.00 0.00 1.82
2510 13706 5.406175 CAGGACATAAACAAACAAATGCTGG 59.594 40.000 0.00 0.00 0.00 4.85
2568 13773 2.940994 TCAGGGAACGACCAAATCAA 57.059 45.000 0.00 0.00 41.20 2.57
2656 13866 7.172361 ACTTCTGAAAAGTCAATAGAGTTCAGC 59.828 37.037 6.38 0.00 37.79 4.26
2671 13888 8.567221 CGCGTTTTATTTATCACTTCTGAAAAG 58.433 33.333 0.00 0.00 0.00 2.27
2675 13892 6.715344 ACGCGTTTTATTTATCACTTCTGA 57.285 33.333 5.58 0.00 0.00 3.27
2678 13895 9.092322 CATCATACGCGTTTTATTTATCACTTC 57.908 33.333 20.78 0.00 0.00 3.01
2682 13900 8.822855 AGTTCATCATACGCGTTTTATTTATCA 58.177 29.630 20.78 0.00 0.00 2.15
2686 13904 8.193250 AGTAGTTCATCATACGCGTTTTATTT 57.807 30.769 20.78 0.00 0.00 1.40
2687 13905 7.766219 AGTAGTTCATCATACGCGTTTTATT 57.234 32.000 20.78 0.00 0.00 1.40
2688 13906 7.766219 AAGTAGTTCATCATACGCGTTTTAT 57.234 32.000 20.78 3.27 0.00 1.40
2689 13907 7.449827 CAAAGTAGTTCATCATACGCGTTTTA 58.550 34.615 20.78 0.14 0.00 1.52
2694 13912 3.551890 AGCAAAGTAGTTCATCATACGCG 59.448 43.478 3.53 3.53 0.00 6.01
2695 13913 4.260375 CCAGCAAAGTAGTTCATCATACGC 60.260 45.833 0.00 0.00 0.00 4.42
2754 14058 7.439356 TCTGACAAAGTAACACAGAAGATCAAG 59.561 37.037 0.00 0.00 35.20 3.02
2785 14189 2.604011 CGACCACAAACACGAACAGTTA 59.396 45.455 0.00 0.00 0.00 2.24
2786 14190 1.395608 CGACCACAAACACGAACAGTT 59.604 47.619 0.00 0.00 0.00 3.16
2787 14191 1.003851 CGACCACAAACACGAACAGT 58.996 50.000 0.00 0.00 0.00 3.55
2788 14192 1.003851 ACGACCACAAACACGAACAG 58.996 50.000 0.00 0.00 0.00 3.16
2789 14193 2.195096 CTACGACCACAAACACGAACA 58.805 47.619 0.00 0.00 0.00 3.18
2790 14194 1.071041 GCTACGACCACAAACACGAAC 60.071 52.381 0.00 0.00 0.00 3.95
2791 14195 1.210870 GCTACGACCACAAACACGAA 58.789 50.000 0.00 0.00 0.00 3.85
2792 14196 0.935831 CGCTACGACCACAAACACGA 60.936 55.000 0.00 0.00 0.00 4.35
2793 14197 1.210545 ACGCTACGACCACAAACACG 61.211 55.000 0.00 0.00 0.00 4.49
2794 14198 0.932399 AACGCTACGACCACAAACAC 59.068 50.000 0.00 0.00 0.00 3.32
2795 14199 0.931702 CAACGCTACGACCACAAACA 59.068 50.000 0.00 0.00 0.00 2.83
2796 14200 0.932399 ACAACGCTACGACCACAAAC 59.068 50.000 0.00 0.00 0.00 2.93
2797 14201 1.210870 GACAACGCTACGACCACAAA 58.789 50.000 0.00 0.00 0.00 2.83
2798 14202 0.935831 CGACAACGCTACGACCACAA 60.936 55.000 0.00 0.00 0.00 3.33
2799 14203 1.370778 CGACAACGCTACGACCACA 60.371 57.895 0.00 0.00 0.00 4.17
2800 14204 1.370900 ACGACAACGCTACGACCAC 60.371 57.895 0.00 0.00 43.96 4.16
2801 14205 1.370778 CACGACAACGCTACGACCA 60.371 57.895 0.00 0.00 43.96 4.02
2802 14206 1.370900 ACACGACAACGCTACGACC 60.371 57.895 0.00 0.00 43.96 4.79
2803 14207 0.658244 TCACACGACAACGCTACGAC 60.658 55.000 0.00 0.00 43.96 4.34
2804 14208 0.029167 TTCACACGACAACGCTACGA 59.971 50.000 0.00 0.00 43.96 3.43
2805 14209 0.158096 GTTCACACGACAACGCTACG 59.842 55.000 0.00 0.00 43.96 3.51
2806 14210 1.189446 CTGTTCACACGACAACGCTAC 59.811 52.381 0.00 0.00 43.96 3.58
2807 14211 1.483316 CTGTTCACACGACAACGCTA 58.517 50.000 0.00 0.00 43.96 4.26
2808 14212 1.762222 GCTGTTCACACGACAACGCT 61.762 55.000 0.00 0.00 43.96 5.07
2809 14213 1.367665 GCTGTTCACACGACAACGC 60.368 57.895 0.00 0.00 43.96 4.84
2810 14214 1.275657 GGCTGTTCACACGACAACG 59.724 57.895 0.00 0.00 45.75 4.10
2811 14215 0.944386 ATGGCTGTTCACACGACAAC 59.056 50.000 0.00 0.00 0.00 3.32
2812 14216 2.535012 TATGGCTGTTCACACGACAA 57.465 45.000 0.00 0.00 0.00 3.18
2813 14217 2.760634 ATATGGCTGTTCACACGACA 57.239 45.000 0.00 0.00 0.00 4.35
2814 14218 4.267928 GTCTTATATGGCTGTTCACACGAC 59.732 45.833 0.00 0.00 0.00 4.34
2815 14219 4.081917 TGTCTTATATGGCTGTTCACACGA 60.082 41.667 0.00 0.00 0.00 4.35
2816 14220 4.180817 TGTCTTATATGGCTGTTCACACG 58.819 43.478 0.00 0.00 0.00 4.49
2817 14221 5.817296 TCATGTCTTATATGGCTGTTCACAC 59.183 40.000 0.00 0.00 0.00 3.82
2818 14222 5.817296 GTCATGTCTTATATGGCTGTTCACA 59.183 40.000 0.00 0.00 0.00 3.58
2819 14223 5.817296 TGTCATGTCTTATATGGCTGTTCAC 59.183 40.000 0.00 0.00 31.61 3.18
2820 14224 5.988287 TGTCATGTCTTATATGGCTGTTCA 58.012 37.500 0.00 0.00 31.61 3.18
2821 14225 6.925610 TTGTCATGTCTTATATGGCTGTTC 57.074 37.500 0.00 0.00 31.61 3.18
2822 14226 6.183360 CGTTTGTCATGTCTTATATGGCTGTT 60.183 38.462 0.00 0.00 31.61 3.16
2823 14227 5.294306 CGTTTGTCATGTCTTATATGGCTGT 59.706 40.000 0.00 0.00 31.61 4.40
2824 14228 5.523552 TCGTTTGTCATGTCTTATATGGCTG 59.476 40.000 0.00 0.00 31.61 4.85
2825 14229 5.670485 TCGTTTGTCATGTCTTATATGGCT 58.330 37.500 0.00 0.00 31.61 4.75
2826 14230 5.984233 TCGTTTGTCATGTCTTATATGGC 57.016 39.130 0.00 0.00 0.00 4.40
2920 14349 0.464870 CTCTGCATAGCCTGTCTGCT 59.535 55.000 0.00 0.00 45.38 4.24
2921 14350 0.177604 ACTCTGCATAGCCTGTCTGC 59.822 55.000 0.00 0.00 36.45 4.26
2922 14351 2.223923 GGTACTCTGCATAGCCTGTCTG 60.224 54.545 0.00 0.00 0.00 3.51
2923 14352 2.035632 GGTACTCTGCATAGCCTGTCT 58.964 52.381 0.00 0.00 0.00 3.41
2924 14353 1.269309 CGGTACTCTGCATAGCCTGTC 60.269 57.143 0.00 0.00 0.00 3.51
2925 14354 0.747255 CGGTACTCTGCATAGCCTGT 59.253 55.000 0.00 0.00 0.00 4.00
2926 14355 1.032794 TCGGTACTCTGCATAGCCTG 58.967 55.000 0.00 0.00 0.00 4.85
2927 14356 1.615883 CATCGGTACTCTGCATAGCCT 59.384 52.381 0.00 0.00 0.00 4.58
2928 14357 1.337260 CCATCGGTACTCTGCATAGCC 60.337 57.143 0.00 0.00 0.00 3.93
2929 14358 1.613925 TCCATCGGTACTCTGCATAGC 59.386 52.381 0.00 0.00 0.00 2.97
2930 14359 3.367806 CCATCCATCGGTACTCTGCATAG 60.368 52.174 0.00 0.00 0.00 2.23
2931 14360 2.562738 CCATCCATCGGTACTCTGCATA 59.437 50.000 0.00 0.00 0.00 3.14
2932 14361 1.345741 CCATCCATCGGTACTCTGCAT 59.654 52.381 0.00 0.00 0.00 3.96
2989 14431 7.786046 TGTTCTTACAGGTAAACATAGAGGA 57.214 36.000 0.00 0.00 0.00 3.71
2995 14437 7.883311 ACAGCTATTGTTCTTACAGGTAAACAT 59.117 33.333 0.00 0.00 36.31 2.71
3014 14456 6.070767 ACACACCTACAAACTGATACAGCTAT 60.071 38.462 0.00 0.00 34.37 2.97
3101 14547 9.968743 GCTGTTTATGTAGTTGTAGTGTTATTC 57.031 33.333 0.00 0.00 0.00 1.75
3102 14548 9.720769 AGCTGTTTATGTAGTTGTAGTGTTATT 57.279 29.630 0.00 0.00 0.00 1.40
3104 14550 9.630098 GTAGCTGTTTATGTAGTTGTAGTGTTA 57.370 33.333 0.00 0.00 0.00 2.41
3105 14551 7.327761 CGTAGCTGTTTATGTAGTTGTAGTGTT 59.672 37.037 0.00 0.00 0.00 3.32
3106 14552 6.805271 CGTAGCTGTTTATGTAGTTGTAGTGT 59.195 38.462 0.00 0.00 0.00 3.55
3107 14553 6.805271 ACGTAGCTGTTTATGTAGTTGTAGTG 59.195 38.462 0.00 0.00 0.00 2.74
3108 14554 6.917533 ACGTAGCTGTTTATGTAGTTGTAGT 58.082 36.000 0.00 0.00 0.00 2.73
3109 14555 8.180267 ACTACGTAGCTGTTTATGTAGTTGTAG 58.820 37.037 22.40 0.00 46.57 2.74
3110 14556 7.964559 CACTACGTAGCTGTTTATGTAGTTGTA 59.035 37.037 22.40 0.00 46.57 2.41
3111 14557 6.805271 CACTACGTAGCTGTTTATGTAGTTGT 59.195 38.462 22.40 0.00 46.57 3.32
3112 14558 7.025365 TCACTACGTAGCTGTTTATGTAGTTG 58.975 38.462 22.40 7.96 46.57 3.16
3113 14559 7.149569 TCACTACGTAGCTGTTTATGTAGTT 57.850 36.000 22.40 0.00 46.57 2.24
3115 14561 8.340443 TGTATCACTACGTAGCTGTTTATGTAG 58.660 37.037 22.40 10.71 43.78 2.74
3116 14562 8.212317 TGTATCACTACGTAGCTGTTTATGTA 57.788 34.615 22.40 4.49 0.00 2.29
3117 14563 7.092137 TGTATCACTACGTAGCTGTTTATGT 57.908 36.000 22.40 0.00 0.00 2.29
3118 14564 9.673454 TTATGTATCACTACGTAGCTGTTTATG 57.327 33.333 22.40 11.17 32.34 1.90
3121 14567 9.595823 AATTTATGTATCACTACGTAGCTGTTT 57.404 29.630 22.40 12.96 32.34 2.83
3122 14568 9.595823 AAATTTATGTATCACTACGTAGCTGTT 57.404 29.630 22.40 15.39 32.34 3.16
3123 14569 9.245962 GAAATTTATGTATCACTACGTAGCTGT 57.754 33.333 22.40 10.50 32.34 4.40
3124 14570 8.700644 GGAAATTTATGTATCACTACGTAGCTG 58.299 37.037 22.40 18.03 32.34 4.24
3125 14571 8.639761 AGGAAATTTATGTATCACTACGTAGCT 58.360 33.333 22.40 9.97 32.34 3.32
3126 14572 8.813643 AGGAAATTTATGTATCACTACGTAGC 57.186 34.615 22.40 6.36 32.34 3.58
3143 14589 8.275758 GGGAGAGAAGGTTAGATTAGGAAATTT 58.724 37.037 0.00 0.00 0.00 1.82
3144 14590 7.147284 GGGGAGAGAAGGTTAGATTAGGAAATT 60.147 40.741 0.00 0.00 0.00 1.82
3145 14591 6.330514 GGGGAGAGAAGGTTAGATTAGGAAAT 59.669 42.308 0.00 0.00 0.00 2.17
3146 14592 5.666265 GGGGAGAGAAGGTTAGATTAGGAAA 59.334 44.000 0.00 0.00 0.00 3.13
3147 14593 5.217400 GGGGAGAGAAGGTTAGATTAGGAA 58.783 45.833 0.00 0.00 0.00 3.36
3148 14594 4.388804 GGGGGAGAGAAGGTTAGATTAGGA 60.389 50.000 0.00 0.00 0.00 2.94
3149 14595 3.904965 GGGGGAGAGAAGGTTAGATTAGG 59.095 52.174 0.00 0.00 0.00 2.69
3150 14596 4.591072 CAGGGGGAGAGAAGGTTAGATTAG 59.409 50.000 0.00 0.00 0.00 1.73
3151 14597 4.234458 TCAGGGGGAGAGAAGGTTAGATTA 59.766 45.833 0.00 0.00 0.00 1.75
3152 14598 3.014110 TCAGGGGGAGAGAAGGTTAGATT 59.986 47.826 0.00 0.00 0.00 2.40
3153 14599 2.592512 TCAGGGGGAGAGAAGGTTAGAT 59.407 50.000 0.00 0.00 0.00 1.98
3154 14600 2.008400 TCAGGGGGAGAGAAGGTTAGA 58.992 52.381 0.00 0.00 0.00 2.10
3155 14601 2.552093 TCAGGGGGAGAGAAGGTTAG 57.448 55.000 0.00 0.00 0.00 2.34
3156 14602 3.508952 AATCAGGGGGAGAGAAGGTTA 57.491 47.619 0.00 0.00 0.00 2.85
3157 14603 2.367947 AATCAGGGGGAGAGAAGGTT 57.632 50.000 0.00 0.00 0.00 3.50
3158 14604 2.367947 AAATCAGGGGGAGAGAAGGT 57.632 50.000 0.00 0.00 0.00 3.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.