Multiple sequence alignment - TraesCS7D01G176900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G176900 chr7D 100.000 7636 0 0 1 7636 129779254 129786889 0.000000e+00 14102.0
1 TraesCS7D01G176900 chr7D 90.049 613 48 11 1 605 60232826 60233433 0.000000e+00 782.0
2 TraesCS7D01G176900 chr7D 93.333 120 8 0 5798 5917 236827501 236827382 2.190000e-40 178.0
3 TraesCS7D01G176900 chr7D 91.736 121 10 0 5797 5917 175941691 175941811 1.320000e-37 169.0
4 TraesCS7D01G176900 chr7D 92.373 118 7 1 5798 5915 390684968 390684853 4.740000e-37 167.0
5 TraesCS7D01G176900 chr7D 97.561 82 1 1 7556 7636 591405345 591405264 1.030000e-28 139.0
6 TraesCS7D01G176900 chr7D 86.486 74 7 3 7556 7628 608492061 608492132 2.280000e-10 78.7
7 TraesCS7D01G176900 chr7A 90.934 3276 176 43 4184 7402 128898301 128901512 0.000000e+00 4292.0
8 TraesCS7D01G176900 chr7A 91.568 1933 87 25 3669 5563 128897799 128899693 0.000000e+00 2597.0
9 TraesCS7D01G176900 chr7A 91.930 1425 54 27 665 2065 128894941 128896328 0.000000e+00 1938.0
10 TraesCS7D01G176900 chr7A 92.490 1052 36 11 2611 3631 128896760 128897799 0.000000e+00 1465.0
11 TraesCS7D01G176900 chr7A 83.087 473 41 17 2099 2563 128896324 128896765 2.000000e-105 394.0
12 TraesCS7D01G176900 chr7A 91.667 120 10 0 5798 5917 252184578 252184459 4.740000e-37 167.0
13 TraesCS7D01G176900 chr7B 93.674 2703 107 23 858 3533 91122194 91124859 0.000000e+00 3986.0
14 TraesCS7D01G176900 chr7B 92.790 1373 68 21 6040 7402 91127189 91128540 0.000000e+00 1958.0
15 TraesCS7D01G176900 chr7B 90.360 1307 62 11 3538 4823 91124943 91126206 0.000000e+00 1657.0
16 TraesCS7D01G176900 chr7B 92.768 401 22 6 5091 5486 91126605 91127003 2.390000e-159 573.0
17 TraesCS7D01G176900 chr7B 95.851 241 9 1 4805 5044 91126368 91126608 9.290000e-104 388.0
18 TraesCS7D01G176900 chr7B 91.489 141 10 2 665 803 91121641 91121781 7.820000e-45 193.0
19 TraesCS7D01G176900 chr7B 92.500 120 9 0 5798 5917 213463561 213463442 1.020000e-38 172.0
20 TraesCS7D01G176900 chr7B 96.154 52 2 0 7503 7554 91132716 91132767 1.370000e-12 86.1
21 TraesCS7D01G176900 chr4D 93.851 618 29 3 1 618 370630457 370629849 0.000000e+00 922.0
22 TraesCS7D01G176900 chr4D 91.625 597 44 2 1 597 170246821 170247411 0.000000e+00 821.0
23 TraesCS7D01G176900 chr2D 91.803 610 45 4 1 606 78341631 78342239 0.000000e+00 845.0
24 TraesCS7D01G176900 chr2D 92.500 120 9 0 5798 5917 98988192 98988073 1.020000e-38 172.0
25 TraesCS7D01G176900 chr2D 96.296 81 3 0 7556 7636 638673563 638673643 4.810000e-27 134.0
26 TraesCS7D01G176900 chr1D 91.987 599 45 2 1 596 344126763 344127361 0.000000e+00 837.0
27 TraesCS7D01G176900 chr1D 86.486 74 6 3 7556 7628 418243876 418243946 2.280000e-10 78.7
28 TraesCS7D01G176900 chr1D 85.135 74 8 3 7556 7628 413855839 413855768 1.060000e-08 73.1
29 TraesCS7D01G176900 chr5A 92.114 596 42 3 10 602 398731105 398730512 0.000000e+00 835.0
30 TraesCS7D01G176900 chr5A 95.122 41 2 0 1141 1181 30424039 30423999 1.780000e-06 65.8
31 TraesCS7D01G176900 chr5D 91.275 596 49 2 1 595 45264878 45264285 0.000000e+00 809.0
32 TraesCS7D01G176900 chr5D 91.781 584 44 3 1 584 551048387 551048966 0.000000e+00 809.0
33 TraesCS7D01G176900 chrUn 90.066 604 53 3 1 604 97052674 97052078 0.000000e+00 776.0
34 TraesCS7D01G176900 chr4A 92.500 120 9 0 5798 5917 177613090 177612971 1.020000e-38 172.0
35 TraesCS7D01G176900 chr4A 91.597 119 10 0 5799 5917 302680060 302680178 1.700000e-36 165.0
36 TraesCS7D01G176900 chr4A 85.542 83 7 5 7556 7636 636011256 636011335 1.770000e-11 82.4
37 TraesCS7D01G176900 chr6A 82.927 164 26 2 1049 1211 37408026 37407864 6.170000e-31 147.0
38 TraesCS7D01G176900 chr6B 81.707 164 28 2 1049 1211 68923320 68923158 1.340000e-27 135.0
39 TraesCS7D01G176900 chr6B 86.957 69 6 2 7556 7623 641467183 641467249 2.960000e-09 75.0
40 TraesCS7D01G176900 chr6B 87.500 64 7 1 6418 6480 605553946 605553883 1.060000e-08 73.1
41 TraesCS7D01G176900 chr3D 86.486 74 5 3 7556 7628 75980614 75980683 8.220000e-10 76.8
42 TraesCS7D01G176900 chr6D 84.146 82 8 5 7557 7636 382616664 382616586 2.960000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G176900 chr7D 129779254 129786889 7635 False 14102.000000 14102 100.0000 1 7636 1 chr7D.!!$F2 7635
1 TraesCS7D01G176900 chr7D 60232826 60233433 607 False 782.000000 782 90.0490 1 605 1 chr7D.!!$F1 604
2 TraesCS7D01G176900 chr7A 128894941 128901512 6571 False 2137.200000 4292 90.0018 665 7402 5 chr7A.!!$F1 6737
3 TraesCS7D01G176900 chr7B 91121641 91128540 6899 False 1459.166667 3986 92.8220 665 7402 6 chr7B.!!$F2 6737
4 TraesCS7D01G176900 chr4D 370629849 370630457 608 True 922.000000 922 93.8510 1 618 1 chr4D.!!$R1 617
5 TraesCS7D01G176900 chr4D 170246821 170247411 590 False 821.000000 821 91.6250 1 597 1 chr4D.!!$F1 596
6 TraesCS7D01G176900 chr2D 78341631 78342239 608 False 845.000000 845 91.8030 1 606 1 chr2D.!!$F1 605
7 TraesCS7D01G176900 chr1D 344126763 344127361 598 False 837.000000 837 91.9870 1 596 1 chr1D.!!$F1 595
8 TraesCS7D01G176900 chr5A 398730512 398731105 593 True 835.000000 835 92.1140 10 602 1 chr5A.!!$R2 592
9 TraesCS7D01G176900 chr5D 45264285 45264878 593 True 809.000000 809 91.2750 1 595 1 chr5D.!!$R1 594
10 TraesCS7D01G176900 chr5D 551048387 551048966 579 False 809.000000 809 91.7810 1 584 1 chr5D.!!$F1 583
11 TraesCS7D01G176900 chrUn 97052078 97052674 596 True 776.000000 776 90.0660 1 604 1 chrUn.!!$R1 603

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
979 1361 0.183731 CCCAGGCTAGGGTTTGATCC 59.816 60.000 12.34 0.0 44.24 3.36 F
1334 1734 0.368227 GCGACACTCTTGAGCGATTG 59.632 55.000 0.00 0.0 0.00 2.67 F
2465 2879 0.733909 TGATGCGTGCGAACTGAGAG 60.734 55.000 0.00 0.0 0.00 3.20 F
2466 2880 0.734253 GATGCGTGCGAACTGAGAGT 60.734 55.000 0.00 0.0 0.00 3.24 F
3102 3521 1.074248 GGGAATGGGTGTGGTTCGT 59.926 57.895 0.00 0.0 0.00 3.85 F
3303 3722 1.376553 GGAAGCTGTGGAGTCTGCC 60.377 63.158 0.00 0.0 33.76 4.85 F
4484 5070 0.178967 TCTGATTGCCTGTTGCCCAA 60.179 50.000 0.00 0.0 40.16 4.12 F
5559 6348 0.104304 GTCGGACAGTCGGGCATTAT 59.896 55.000 7.81 0.0 0.00 1.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2581 3000 0.107945 GATGGTGAGTGGCTCTGTCC 60.108 60.000 0.00 0.0 0.00 4.02 R
2985 3404 1.047002 TTGTGTTGGGGCCAGAATTG 58.953 50.000 4.39 0.0 0.00 2.32 R
4373 4958 1.669795 GCTACAAGCCAACAACCATGC 60.670 52.381 0.00 0.0 34.48 4.06 R
4444 5030 3.891977 GACTACCAGAGACATGAGCCATA 59.108 47.826 0.00 0.0 0.00 2.74 R
4484 5070 0.039911 AGGGAGACAACCTAGAGCGT 59.960 55.000 0.00 0.0 36.32 5.07 R
4635 5226 3.004629 CACAGTGCTGGCAAAGTAAATGA 59.995 43.478 4.11 0.0 34.19 2.57 R
5852 6641 0.326264 AGAGCTGAAACCCGCAAGAT 59.674 50.000 0.00 0.0 43.02 2.40 R
7503 8338 0.035915 GAGAGAACAAGTGGGCCTCC 60.036 60.000 4.53 0.0 0.00 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
94 96 2.098614 TGGGCAAATGCGAATACACAT 58.901 42.857 0.00 0.00 43.26 3.21
112 116 3.257127 CACATAAATCCGTGGGGTGTTTT 59.743 43.478 0.00 0.00 33.83 2.43
117 121 1.602605 CCGTGGGGTGTTTTCCCTC 60.603 63.158 1.72 0.00 46.27 4.30
212 217 5.414454 AGAAATAGAAGGAGATCGGAGATCG 59.586 44.000 4.60 0.00 45.12 3.69
222 230 0.895530 TCGGAGATCGACCTGCTTTT 59.104 50.000 0.00 0.00 43.74 2.27
271 292 4.614036 GGTGGGGGTGGGTGGTTG 62.614 72.222 0.00 0.00 0.00 3.77
297 318 0.394565 GGAAGGCGCTATGGATCTGT 59.605 55.000 7.64 0.00 0.00 3.41
298 319 1.606737 GGAAGGCGCTATGGATCTGTC 60.607 57.143 7.64 0.00 0.00 3.51
389 410 2.491022 GGTCGGACTGGGGATCGAG 61.491 68.421 8.23 0.00 32.09 4.04
601 624 2.610374 GCAGTTATCGGCGTCCATTTTA 59.390 45.455 6.85 0.00 0.00 1.52
607 630 7.911205 CAGTTATCGGCGTCCATTTTATTTTTA 59.089 33.333 6.85 0.00 0.00 1.52
608 631 8.626526 AGTTATCGGCGTCCATTTTATTTTTAT 58.373 29.630 6.85 0.00 0.00 1.40
610 633 9.804758 TTATCGGCGTCCATTTTATTTTTATTT 57.195 25.926 6.85 0.00 0.00 1.40
611 634 8.710835 ATCGGCGTCCATTTTATTTTTATTTT 57.289 26.923 6.85 0.00 0.00 1.82
613 636 9.635520 TCGGCGTCCATTTTATTTTTATTTTTA 57.364 25.926 6.85 0.00 0.00 1.52
652 675 4.380843 TTTTTGAGGTAATCAGGCCAGA 57.619 40.909 5.01 1.39 39.68 3.86
653 676 4.380843 TTTTGAGGTAATCAGGCCAGAA 57.619 40.909 5.01 0.00 39.68 3.02
654 677 4.380843 TTTGAGGTAATCAGGCCAGAAA 57.619 40.909 5.01 0.00 39.68 2.52
655 678 4.380843 TTGAGGTAATCAGGCCAGAAAA 57.619 40.909 5.01 0.00 39.68 2.29
656 679 4.591321 TGAGGTAATCAGGCCAGAAAAT 57.409 40.909 5.01 0.00 32.77 1.82
657 680 4.272489 TGAGGTAATCAGGCCAGAAAATG 58.728 43.478 5.01 0.00 32.77 2.32
658 681 4.263905 TGAGGTAATCAGGCCAGAAAATGT 60.264 41.667 5.01 0.00 32.77 2.71
659 682 4.677182 AGGTAATCAGGCCAGAAAATGTT 58.323 39.130 5.01 0.00 0.00 2.71
660 683 5.826643 AGGTAATCAGGCCAGAAAATGTTA 58.173 37.500 5.01 0.00 0.00 2.41
661 684 5.888161 AGGTAATCAGGCCAGAAAATGTTAG 59.112 40.000 5.01 0.00 0.00 2.34
662 685 5.885912 GGTAATCAGGCCAGAAAATGTTAGA 59.114 40.000 5.01 0.00 0.00 2.10
663 686 6.547510 GGTAATCAGGCCAGAAAATGTTAGAT 59.452 38.462 5.01 0.00 0.00 1.98
664 687 6.461110 AATCAGGCCAGAAAATGTTAGATG 57.539 37.500 5.01 0.00 0.00 2.90
665 688 4.922206 TCAGGCCAGAAAATGTTAGATGT 58.078 39.130 5.01 0.00 0.00 3.06
666 689 4.701651 TCAGGCCAGAAAATGTTAGATGTG 59.298 41.667 5.01 0.00 0.00 3.21
667 690 3.445096 AGGCCAGAAAATGTTAGATGTGC 59.555 43.478 5.01 0.00 0.00 4.57
668 691 3.429085 GCCAGAAAATGTTAGATGTGCG 58.571 45.455 0.00 0.00 0.00 5.34
745 769 1.505425 GAGGTACGCTGAAAACCGTT 58.495 50.000 0.00 0.00 38.37 4.44
748 772 1.070376 GGTACGCTGAAAACCGTTCAC 60.070 52.381 0.00 0.00 38.75 3.18
979 1361 0.183731 CCCAGGCTAGGGTTTGATCC 59.816 60.000 12.34 0.00 44.24 3.36
991 1373 1.906105 TTTGATCCCCGGTCCCTTCG 61.906 60.000 0.00 0.00 0.00 3.79
1104 1501 0.470833 AGATGGAGGGGAGGATCGTG 60.471 60.000 0.00 0.00 34.37 4.35
1218 1615 4.581824 CCGCTCCACTATAAGGTTAGTGTA 59.418 45.833 9.92 0.00 44.97 2.90
1228 1625 8.759782 ACTATAAGGTTAGTGTATTGAGTGCTT 58.240 33.333 0.00 0.00 31.25 3.91
1270 1670 1.808411 TTGATTCCTTCGGTGCTGTC 58.192 50.000 0.00 0.00 0.00 3.51
1291 1691 3.952811 GAGTGGTTCGAGTGGTGC 58.047 61.111 0.00 0.00 0.00 5.01
1322 1722 1.367840 GGTCTGGTTGAGCGACACT 59.632 57.895 0.00 0.00 33.25 3.55
1323 1723 0.667792 GGTCTGGTTGAGCGACACTC 60.668 60.000 0.00 0.00 46.45 3.51
1334 1734 0.368227 GCGACACTCTTGAGCGATTG 59.632 55.000 0.00 0.00 0.00 2.67
1370 1771 6.127869 TGCATAATAATTGTGCCGTTTAGTGT 60.128 34.615 7.20 0.00 45.80 3.55
1371 1772 6.413818 GCATAATAATTGTGCCGTTTAGTGTC 59.586 38.462 0.00 0.00 41.29 3.67
1372 1773 5.950758 AATAATTGTGCCGTTTAGTGTCA 57.049 34.783 0.00 0.00 0.00 3.58
1412 1813 1.398390 CGATTTGGCTGCTCCTGTTAC 59.602 52.381 0.00 0.00 35.26 2.50
1428 1829 5.300792 TCCTGTTACCTTTTTCAGCGAAAAT 59.699 36.000 14.24 5.80 40.50 1.82
1452 1854 5.358090 TGCTTTTTCTGATGCAATTGACAA 58.642 33.333 10.34 0.00 32.12 3.18
1487 1894 1.217882 CGGATTTCGTATGGTCTGCC 58.782 55.000 0.00 0.00 0.00 4.85
1530 1937 4.552166 TTTCTTCAGAGGCTTCGTTTTG 57.448 40.909 0.00 0.00 0.00 2.44
1563 1970 5.067283 GGATTTGCTTCCCGTGTAATTACAT 59.933 40.000 20.72 0.80 38.63 2.29
1616 2023 5.717654 TCTTTGTAAATATCGCCCCCTTTTT 59.282 36.000 0.00 0.00 0.00 1.94
1770 2181 6.627395 AAACAATTCGTGTCCTTTGATGTA 57.373 33.333 0.00 0.00 40.60 2.29
1897 2308 0.941542 TCACGTGGTAGCTTTTGTGC 59.058 50.000 17.00 0.00 0.00 4.57
1900 2311 1.440353 GTGGTAGCTTTTGTGCGCG 60.440 57.895 0.00 0.00 38.13 6.86
1902 2313 2.175811 GTAGCTTTTGTGCGCGGG 59.824 61.111 8.83 0.00 38.13 6.13
1924 2335 1.227853 GTGCTTGTCGGAACCTGGT 60.228 57.895 0.00 0.00 0.00 4.00
2065 2476 5.595885 AGATCACATGGAGATTCTTGTACG 58.404 41.667 0.00 0.00 0.00 3.67
2183 2596 6.639279 TGCACCTCTTTATTTTAAGCGAAAAC 59.361 34.615 2.20 0.00 39.83 2.43
2208 2621 5.904362 AGCAGACCAATTTTGAGTAATCC 57.096 39.130 0.00 0.00 0.00 3.01
2245 2658 3.300590 CCATAAAGAAACATTCGTTGCGC 59.699 43.478 0.00 0.00 35.59 6.09
2384 2798 1.966451 GGTTGCCACGTGCTTAGCT 60.966 57.895 10.91 0.00 42.00 3.32
2464 2878 1.008875 GTGATGCGTGCGAACTGAGA 61.009 55.000 0.00 0.00 0.00 3.27
2465 2879 0.733909 TGATGCGTGCGAACTGAGAG 60.734 55.000 0.00 0.00 0.00 3.20
2466 2880 0.734253 GATGCGTGCGAACTGAGAGT 60.734 55.000 0.00 0.00 0.00 3.24
2482 2896 6.709281 ACTGAGAGTAAGTGCAGTAGTACTA 58.291 40.000 1.57 0.00 39.97 1.82
2500 2919 6.706295 AGTACTAGCTGATTTCTTTCTGCTT 58.294 36.000 10.42 0.00 45.26 3.91
2512 2931 3.646162 TCTTTCTGCTTACCTGTTGGAGA 59.354 43.478 0.00 0.00 37.04 3.71
2571 2990 3.622612 GCATGATGGGTATTTTTGGTTGC 59.377 43.478 0.00 0.00 0.00 4.17
2581 3000 5.234116 GGTATTTTTGGTTGCAGTGTTTCTG 59.766 40.000 0.00 0.00 46.12 3.02
2584 3003 1.388547 TGGTTGCAGTGTTTCTGGAC 58.611 50.000 0.00 0.00 43.87 4.02
2588 3007 2.245159 TGCAGTGTTTCTGGACAGAG 57.755 50.000 1.92 0.00 43.78 3.35
2591 3010 1.131638 AGTGTTTCTGGACAGAGCCA 58.868 50.000 1.92 1.17 38.88 4.75
2593 3012 1.131638 TGTTTCTGGACAGAGCCACT 58.868 50.000 1.92 0.00 38.88 4.00
2605 3024 3.265791 CAGAGCCACTCACCATCTTAAC 58.734 50.000 0.00 0.00 32.06 2.01
2640 3059 9.698309 TTATCGATGATCATTCTTCTTCCTAAC 57.302 33.333 10.14 0.00 0.00 2.34
2662 3081 4.127171 CGGATGGAATTTATCGGTGTTCT 58.873 43.478 0.00 0.00 0.00 3.01
2664 3083 5.277345 CGGATGGAATTTATCGGTGTTCTTC 60.277 44.000 0.00 0.00 0.00 2.87
2744 3163 5.360714 AGTCATGGTGAAAGTTTGATGTTGT 59.639 36.000 0.00 0.00 0.00 3.32
2775 3194 2.028420 ATGCTGCACTGATTCGCTTA 57.972 45.000 3.57 0.00 0.00 3.09
2985 3404 6.388394 AGAGGAAGGGAATATTATCTATGGCC 59.612 42.308 0.00 0.00 0.00 5.36
3102 3521 1.074248 GGGAATGGGTGTGGTTCGT 59.926 57.895 0.00 0.00 0.00 3.85
3303 3722 1.376553 GGAAGCTGTGGAGTCTGCC 60.377 63.158 0.00 0.00 33.76 4.85
3433 3854 6.506538 AGTTTGCCCTTATATCTCAGATGT 57.493 37.500 0.00 0.00 0.00 3.06
3442 3867 7.160049 CCTTATATCTCAGATGTGTGCTCAAT 58.840 38.462 0.00 0.00 0.00 2.57
3466 3891 3.913548 TCGCAACAATGTTTACTGCAT 57.086 38.095 8.27 0.00 33.19 3.96
3508 3955 5.542635 ACCCGTGCATCTTTTAGATAGGATA 59.457 40.000 0.00 0.00 32.12 2.59
3510 3957 7.106239 CCCGTGCATCTTTTAGATAGGATATT 58.894 38.462 0.00 0.00 32.12 1.28
3578 4104 6.012113 TCAGATCAACCTTTGTGAAATCCAT 58.988 36.000 0.00 0.00 0.00 3.41
3647 4178 2.753452 TGTACCCTCGACTTTCTAGCAG 59.247 50.000 0.00 0.00 0.00 4.24
3774 4310 8.279970 TGAACATCCACCTTTATCTACATTTG 57.720 34.615 0.00 0.00 0.00 2.32
3775 4311 7.339212 TGAACATCCACCTTTATCTACATTTGG 59.661 37.037 0.00 0.00 0.00 3.28
3776 4312 6.969043 ACATCCACCTTTATCTACATTTGGA 58.031 36.000 0.00 0.00 36.37 3.53
3777 4313 6.828785 ACATCCACCTTTATCTACATTTGGAC 59.171 38.462 0.00 0.00 34.78 4.02
3778 4314 6.381498 TCCACCTTTATCTACATTTGGACA 57.619 37.500 0.00 0.00 0.00 4.02
3779 4315 6.969043 TCCACCTTTATCTACATTTGGACAT 58.031 36.000 0.00 0.00 0.00 3.06
3780 4316 8.096621 TCCACCTTTATCTACATTTGGACATA 57.903 34.615 0.00 0.00 0.00 2.29
3781 4317 8.553153 TCCACCTTTATCTACATTTGGACATAA 58.447 33.333 0.00 0.00 0.00 1.90
3782 4318 9.354673 CCACCTTTATCTACATTTGGACATAAT 57.645 33.333 0.00 0.00 0.00 1.28
3790 4326 8.250143 TCTACATTTGGACATAATCTAGCAGA 57.750 34.615 0.00 0.00 0.00 4.26
3791 4327 8.874156 TCTACATTTGGACATAATCTAGCAGAT 58.126 33.333 0.00 0.00 36.28 2.90
3793 4329 8.839310 ACATTTGGACATAATCTAGCAGATAC 57.161 34.615 0.02 0.00 32.89 2.24
3794 4330 7.880195 ACATTTGGACATAATCTAGCAGATACC 59.120 37.037 0.02 0.00 32.89 2.73
3795 4331 7.618019 TTTGGACATAATCTAGCAGATACCT 57.382 36.000 0.02 0.00 32.89 3.08
3796 4332 8.721133 TTTGGACATAATCTAGCAGATACCTA 57.279 34.615 0.02 0.00 32.89 3.08
3797 4333 8.901472 TTGGACATAATCTAGCAGATACCTAT 57.099 34.615 0.02 0.00 32.89 2.57
3798 4334 8.526667 TGGACATAATCTAGCAGATACCTATC 57.473 38.462 0.02 0.00 32.89 2.08
3813 4391 8.024285 CAGATACCTATCGGATCTTAACTTGAC 58.976 40.741 0.00 0.00 37.76 3.18
3862 4442 6.522233 GCATATCCTGCGACATATAAGATG 57.478 41.667 0.00 0.00 41.97 2.90
3892 4472 5.134202 TCATTGTCACGACTCTTGTATGT 57.866 39.130 0.00 0.00 0.00 2.29
3952 4532 6.254281 ACCTAGTTTTGCACACATGTAATC 57.746 37.500 0.00 0.00 29.85 1.75
4110 4690 7.710896 AGATAGATGAAGGCAAATTTTACTGC 58.289 34.615 0.00 0.00 37.86 4.40
4137 4717 3.407424 TCTGCACTACAATTGCTCAGT 57.593 42.857 5.05 3.76 40.86 3.41
4192 4772 7.092137 ACTGATCATAAAACATGTCACATGG 57.908 36.000 21.95 3.03 0.00 3.66
4327 4909 7.201565 GGATGCGTATCTGCTATTCTTTTATCC 60.202 40.741 13.38 0.00 35.36 2.59
4328 4910 6.759272 TGCGTATCTGCTATTCTTTTATCCT 58.241 36.000 0.00 0.00 35.36 3.24
4373 4958 2.423892 TCTTGACTAGCTCACTTAGGCG 59.576 50.000 0.00 0.00 0.00 5.52
4413 4999 2.836262 CATCTAGCAAGCTCTTGGAGG 58.164 52.381 11.15 0.00 40.74 4.30
4472 5058 5.588958 TCATGTCTCTGGTAGTCTGATTG 57.411 43.478 0.00 0.00 0.00 2.67
4484 5070 0.178967 TCTGATTGCCTGTTGCCCAA 60.179 50.000 0.00 0.00 40.16 4.12
4565 5151 8.856153 TTGAGTACCTTGTGAATAAATAAGCA 57.144 30.769 0.00 0.00 0.00 3.91
4596 5187 8.355169 AGTTCGTAGAATTGTAGTGTTCTGTAA 58.645 33.333 0.00 0.00 45.90 2.41
4617 5208 7.802738 TGTAAAAGTGTAAACTCCAATCATCG 58.197 34.615 0.00 0.00 0.00 3.84
4635 5226 5.771469 TCATCGATGTTGTTCATTGCTTTT 58.229 33.333 24.09 0.00 37.73 2.27
4657 5248 3.004629 TCATTTACTTTGCCAGCACTGTG 59.995 43.478 2.76 2.76 0.00 3.66
4745 5339 2.512485 TTGTTGCCAGTCAATTGCTG 57.488 45.000 17.71 17.71 36.99 4.41
4750 5344 2.309613 TGCCAGTCAATTGCTGTTCTT 58.690 42.857 20.87 0.00 32.41 2.52
4778 5372 2.024414 GCAGTGTGAACCCTTTCAACT 58.976 47.619 0.00 0.00 43.52 3.16
4799 5393 3.312828 TGTACATCGGCAACAATTTTGC 58.687 40.909 13.59 13.59 44.22 3.68
4800 5394 2.522836 ACATCGGCAACAATTTTGCA 57.477 40.000 19.78 7.37 46.58 4.08
4838 5612 9.601217 ACCAACTCAGAAACATATGATAGTTAC 57.399 33.333 10.38 0.00 0.00 2.50
4897 5675 2.229792 CATTGCACACCCTGTTACACT 58.770 47.619 0.00 0.00 0.00 3.55
5090 5869 4.633565 GCTCTAAGTTCTTCACCTGGAATG 59.366 45.833 0.00 0.00 34.32 2.67
5105 5884 4.639310 CCTGGAATGGTTCATTCTCTTGAG 59.361 45.833 16.90 8.06 46.47 3.02
5108 5887 5.221904 TGGAATGGTTCATTCTCTTGAGTGA 60.222 40.000 16.90 0.00 46.47 3.41
5208 5988 4.898320 ACTTGAATCTGACATGCACAGTA 58.102 39.130 16.44 7.39 36.81 2.74
5209 5989 4.692625 ACTTGAATCTGACATGCACAGTAC 59.307 41.667 16.44 11.15 36.81 2.73
5234 6014 8.188139 ACAAGGTTATACACTCTTTGTTGTTTG 58.812 33.333 0.00 0.00 39.91 2.93
5277 6057 5.950544 TGGTGACAAGCCTATATAGTGTT 57.049 39.130 8.92 0.00 37.44 3.32
5398 6183 8.732413 TTGATGTTTACCTATATAACTACGCG 57.268 34.615 3.53 3.53 0.00 6.01
5535 6323 6.656693 TCAAGAGACCTCATCAAATTCCTTTC 59.343 38.462 0.00 0.00 0.00 2.62
5551 6340 3.119602 TCCTTTCAATAGTCGGACAGTCG 60.120 47.826 11.27 0.00 0.00 4.18
5552 6341 2.933495 TTCAATAGTCGGACAGTCGG 57.067 50.000 11.27 1.59 0.00 4.79
5553 6342 1.100510 TCAATAGTCGGACAGTCGGG 58.899 55.000 11.27 0.00 0.00 5.14
5554 6343 0.527817 CAATAGTCGGACAGTCGGGC 60.528 60.000 11.27 4.56 0.00 6.13
5555 6344 0.968901 AATAGTCGGACAGTCGGGCA 60.969 55.000 14.57 2.12 0.00 5.36
5556 6345 0.755698 ATAGTCGGACAGTCGGGCAT 60.756 55.000 14.57 4.19 0.00 4.40
5557 6346 0.968901 TAGTCGGACAGTCGGGCATT 60.969 55.000 14.57 0.00 0.00 3.56
5559 6348 0.104304 GTCGGACAGTCGGGCATTAT 59.896 55.000 7.81 0.00 0.00 1.28
5560 6349 1.338973 GTCGGACAGTCGGGCATTATA 59.661 52.381 7.81 0.00 0.00 0.98
5561 6350 2.029290 GTCGGACAGTCGGGCATTATAT 60.029 50.000 7.81 0.00 0.00 0.86
5562 6351 2.631062 TCGGACAGTCGGGCATTATATT 59.369 45.455 8.19 0.00 0.00 1.28
5564 6353 3.554129 CGGACAGTCGGGCATTATATTCA 60.554 47.826 0.00 0.00 0.00 2.57
5565 6354 4.385825 GGACAGTCGGGCATTATATTCAA 58.614 43.478 0.00 0.00 0.00 2.69
5566 6355 5.003804 GGACAGTCGGGCATTATATTCAAT 58.996 41.667 0.00 0.00 0.00 2.57
5567 6356 6.170506 GGACAGTCGGGCATTATATTCAATA 58.829 40.000 0.00 0.00 0.00 1.90
5568 6357 6.313905 GGACAGTCGGGCATTATATTCAATAG 59.686 42.308 0.00 0.00 0.00 1.73
5569 6358 6.769512 ACAGTCGGGCATTATATTCAATAGT 58.230 36.000 0.00 0.00 0.00 2.12
5571 6360 6.035005 CAGTCGGGCATTATATTCAATAGTCG 59.965 42.308 0.00 0.00 0.00 4.18
5574 6363 5.291128 CGGGCATTATATTCAATAGTCGGAC 59.709 44.000 0.00 0.00 0.00 4.79
5576 6365 6.313905 GGGCATTATATTCAATAGTCGGACAG 59.686 42.308 11.27 0.00 0.00 3.51
5577 6366 6.874134 GGCATTATATTCAATAGTCGGACAGT 59.126 38.462 11.27 0.00 0.00 3.55
5579 6368 8.223769 GCATTATATTCAATAGTCGGACAGTTG 58.776 37.037 11.27 13.70 0.00 3.16
5593 6382 5.654650 TCGGACAGTTGGGCATTATATTTTT 59.345 36.000 0.00 0.00 0.00 1.94
5621 6410 8.857098 AGTAAGGATATGCTTACGAAGAACATA 58.143 33.333 30.02 3.17 40.02 2.29
5629 6418 6.636705 TGCTTACGAAGAACATAGTGGTATT 58.363 36.000 0.00 0.00 0.00 1.89
5633 6422 8.836268 TTACGAAGAACATAGTGGTATTGTTT 57.164 30.769 0.00 0.00 0.00 2.83
5639 6428 7.538575 AGAACATAGTGGTATTGTTTTCATGC 58.461 34.615 0.00 0.00 0.00 4.06
5640 6429 7.394359 AGAACATAGTGGTATTGTTTTCATGCT 59.606 33.333 0.00 0.00 0.00 3.79
5648 6437 6.095300 TGGTATTGTTTTCATGCTATGGTCAG 59.905 38.462 0.00 0.00 0.00 3.51
5816 6605 2.818274 GGGGCGCGTGGAAGTTAG 60.818 66.667 8.43 0.00 0.00 2.34
5819 6608 1.153706 GGCGCGTGGAAGTTAGCTA 60.154 57.895 8.43 0.00 0.00 3.32
5820 6609 0.529992 GGCGCGTGGAAGTTAGCTAT 60.530 55.000 8.43 0.00 0.00 2.97
5821 6610 0.853419 GCGCGTGGAAGTTAGCTATC 59.147 55.000 8.43 0.00 0.00 2.08
5823 6612 1.202371 CGCGTGGAAGTTAGCTATCCA 60.202 52.381 10.01 10.01 40.84 3.41
5841 6630 0.454600 CACATGCCAGAACCATGAGC 59.545 55.000 8.22 0.00 41.97 4.26
5855 6644 4.796038 CCATGAGCTGGTTTTGAAATCT 57.204 40.909 0.00 0.00 40.49 2.40
5856 6645 5.143376 CCATGAGCTGGTTTTGAAATCTT 57.857 39.130 0.00 0.00 40.49 2.40
5857 6646 4.927425 CCATGAGCTGGTTTTGAAATCTTG 59.073 41.667 0.00 0.00 40.49 3.02
5880 6669 1.139256 GGTTTCAGCTCTAGCCTACCC 59.861 57.143 0.00 0.00 43.38 3.69
5890 6679 2.570302 TCTAGCCTACCCCAACTTGTTC 59.430 50.000 0.00 0.00 0.00 3.18
5901 6690 3.473625 CCAACTTGTTCGGGACTAAAGT 58.526 45.455 0.00 0.00 0.00 2.66
5927 6734 8.170553 TCTTAGTTGTTGTTGTAAAAAGACGAC 58.829 33.333 0.00 0.00 34.72 4.34
5929 6736 5.120519 AGTTGTTGTTGTAAAAAGACGACGA 59.879 36.000 0.00 0.00 36.63 4.20
5936 6743 4.298332 TGTAAAAAGACGACGAAGGGTAC 58.702 43.478 0.00 0.00 0.00 3.34
5953 6760 7.445402 CGAAGGGTACATTCCATGATATTTTCT 59.555 37.037 0.00 0.00 0.00 2.52
5956 6763 8.723365 AGGGTACATTCCATGATATTTTCTGTA 58.277 33.333 0.00 0.00 0.00 2.74
5958 6765 9.561069 GGTACATTCCATGATATTTTCTGTAGT 57.439 33.333 0.00 0.00 0.00 2.73
5982 6789 0.394938 TTCAGACTGTAAAGCCGCCA 59.605 50.000 1.59 0.00 0.00 5.69
5983 6790 0.394938 TCAGACTGTAAAGCCGCCAA 59.605 50.000 1.59 0.00 0.00 4.52
5999 6806 4.677779 GCCGCCAAAGTCACAATTCAATAT 60.678 41.667 0.00 0.00 0.00 1.28
6006 6813 8.711457 CCAAAGTCACAATTCAATATTTTGGAC 58.289 33.333 6.35 7.26 42.73 4.02
6062 6870 5.772825 TCTTGTTTGACATTCCCAAGAAG 57.227 39.130 0.00 0.00 38.74 2.85
6068 6876 5.772825 TTGACATTCCCAAGAAGAAACAG 57.227 39.130 0.00 0.00 34.86 3.16
6183 6992 7.739498 AAGTATTTGTGGTTTAGTCGAACAT 57.261 32.000 0.00 0.00 0.00 2.71
6246 7055 2.033194 GCGCCAGACTGTTACCACC 61.033 63.158 0.00 0.00 0.00 4.61
6313 7122 4.675933 GCACTTAATGACATTGATGCAGCA 60.676 41.667 19.90 0.00 0.00 4.41
6379 7188 4.520492 GGTTTGCCTCTTTTCTCTTCATCA 59.480 41.667 0.00 0.00 0.00 3.07
6380 7189 5.456265 GTTTGCCTCTTTTCTCTTCATCAC 58.544 41.667 0.00 0.00 0.00 3.06
6389 7198 2.257207 TCTCTTCATCACCGGTCCTTT 58.743 47.619 2.59 0.00 0.00 3.11
6402 7211 1.014564 GTCCTTTCTCTCCGCAACCG 61.015 60.000 0.00 0.00 0.00 4.44
6425 7234 7.179516 ACCGGGGTATCTAATGAATTTGTTTTT 59.820 33.333 6.32 0.00 0.00 1.94
6490 7299 3.330267 AGAAGGTCAGTCTTGATTTCGC 58.670 45.455 0.00 0.00 36.08 4.70
6503 7312 3.340034 TGATTTCGCGGTGAACCTAATT 58.660 40.909 6.13 0.00 35.97 1.40
6505 7314 4.936411 TGATTTCGCGGTGAACCTAATTTA 59.064 37.500 6.13 0.00 35.97 1.40
6629 7447 1.146358 GAAAATCGGAGGAGACGGCG 61.146 60.000 4.80 4.80 0.00 6.46
6655 7473 7.352719 AGTAATTTTTCGAGTAGCTGTTCAG 57.647 36.000 0.00 0.00 0.00 3.02
6724 7542 6.467677 CAACTCTTGTAGGAGAAGGATTGAA 58.532 40.000 0.00 0.00 37.13 2.69
6725 7543 6.882768 ACTCTTGTAGGAGAAGGATTGAAT 57.117 37.500 0.00 0.00 37.13 2.57
6855 7674 1.375268 GTGCTCTTCTTCTGCGGCT 60.375 57.895 0.00 0.00 0.00 5.52
6896 7717 2.355756 CGAAGGATGCTTATGTGTTGGG 59.644 50.000 0.00 0.00 0.00 4.12
6944 7765 1.112113 GCTCGTATGACAAGGGGAGA 58.888 55.000 0.00 0.00 0.00 3.71
6974 7796 9.540538 TCTCCCATTATTTTGAAAAATACAGGA 57.459 29.630 18.28 16.10 39.75 3.86
7061 7884 1.268625 TGCTTCAGATGTTTGCTGCAG 59.731 47.619 10.11 10.11 33.45 4.41
7118 7951 0.251297 CCCATTGTGGTCAAGCCTGA 60.251 55.000 0.00 0.00 35.17 3.86
7236 8071 7.065204 TGCTTTTGGCGTAATTTTCTTTCTTTT 59.935 29.630 0.00 0.00 45.43 2.27
7332 8167 3.249986 TGCTACCGTTTGTACCCATAC 57.750 47.619 0.00 0.00 0.00 2.39
7387 8222 8.410673 TTTGTGGGTTTTATATGTTGCTAGAA 57.589 30.769 0.00 0.00 0.00 2.10
7402 8237 8.861033 TGTTGCTAGAAATATGCAATTTGATC 57.139 30.769 10.33 0.00 46.25 2.92
7403 8238 7.922278 TGTTGCTAGAAATATGCAATTTGATCC 59.078 33.333 10.33 0.00 46.25 3.36
7404 8239 6.985117 TGCTAGAAATATGCAATTTGATCCC 58.015 36.000 10.33 0.00 33.48 3.85
7405 8240 6.088824 GCTAGAAATATGCAATTTGATCCCG 58.911 40.000 10.33 0.00 0.00 5.14
7406 8241 6.294176 GCTAGAAATATGCAATTTGATCCCGT 60.294 38.462 10.33 0.00 0.00 5.28
7407 8242 6.076981 AGAAATATGCAATTTGATCCCGTC 57.923 37.500 10.33 0.00 0.00 4.79
7408 8243 5.593909 AGAAATATGCAATTTGATCCCGTCA 59.406 36.000 10.33 0.00 34.25 4.35
7409 8244 5.850557 AATATGCAATTTGATCCCGTCAA 57.149 34.783 0.00 0.00 44.87 3.18
7442 8277 9.822185 AAAGAAATATGCAATTTGATAAGACCC 57.178 29.630 10.33 0.00 0.00 4.46
7443 8278 7.955918 AGAAATATGCAATTTGATAAGACCCC 58.044 34.615 10.33 0.00 0.00 4.95
7444 8279 7.786464 AGAAATATGCAATTTGATAAGACCCCT 59.214 33.333 10.33 0.00 0.00 4.79
7445 8280 7.530426 AATATGCAATTTGATAAGACCCCTC 57.470 36.000 0.00 0.00 0.00 4.30
7446 8281 3.631250 TGCAATTTGATAAGACCCCTCC 58.369 45.455 0.00 0.00 0.00 4.30
7447 8282 3.011144 TGCAATTTGATAAGACCCCTCCA 59.989 43.478 0.00 0.00 0.00 3.86
7448 8283 3.381590 GCAATTTGATAAGACCCCTCCAC 59.618 47.826 0.00 0.00 0.00 4.02
7449 8284 3.953542 ATTTGATAAGACCCCTCCACC 57.046 47.619 0.00 0.00 0.00 4.61
7450 8285 2.352561 TTGATAAGACCCCTCCACCA 57.647 50.000 0.00 0.00 0.00 4.17
7451 8286 1.879575 TGATAAGACCCCTCCACCAG 58.120 55.000 0.00 0.00 0.00 4.00
7452 8287 1.080498 TGATAAGACCCCTCCACCAGT 59.920 52.381 0.00 0.00 0.00 4.00
7453 8288 1.763545 GATAAGACCCCTCCACCAGTC 59.236 57.143 0.00 0.00 0.00 3.51
7454 8289 0.252558 TAAGACCCCTCCACCAGTCC 60.253 60.000 0.00 0.00 0.00 3.85
7455 8290 3.009714 GACCCCTCCACCAGTCCC 61.010 72.222 0.00 0.00 0.00 4.46
7456 8291 3.864983 GACCCCTCCACCAGTCCCA 62.865 68.421 0.00 0.00 0.00 4.37
7457 8292 3.330720 CCCCTCCACCAGTCCCAC 61.331 72.222 0.00 0.00 0.00 4.61
7458 8293 2.529136 CCCTCCACCAGTCCCACA 60.529 66.667 0.00 0.00 0.00 4.17
7459 8294 1.925455 CCCTCCACCAGTCCCACAT 60.925 63.158 0.00 0.00 0.00 3.21
7460 8295 1.300963 CCTCCACCAGTCCCACATG 59.699 63.158 0.00 0.00 0.00 3.21
7461 8296 1.492133 CCTCCACCAGTCCCACATGT 61.492 60.000 0.00 0.00 0.00 3.21
7462 8297 0.321919 CTCCACCAGTCCCACATGTG 60.322 60.000 19.31 19.31 0.00 3.21
7463 8298 1.973281 CCACCAGTCCCACATGTGC 60.973 63.158 20.81 7.08 0.00 4.57
7464 8299 1.973281 CACCAGTCCCACATGTGCC 60.973 63.158 20.81 9.99 0.00 5.01
7465 8300 2.156098 ACCAGTCCCACATGTGCCT 61.156 57.895 20.81 12.09 0.00 4.75
7466 8301 1.075482 CCAGTCCCACATGTGCCTT 59.925 57.895 20.81 2.57 0.00 4.35
7467 8302 0.540365 CCAGTCCCACATGTGCCTTT 60.540 55.000 20.81 2.94 0.00 3.11
7468 8303 0.883833 CAGTCCCACATGTGCCTTTC 59.116 55.000 20.81 8.21 0.00 2.62
7469 8304 0.478072 AGTCCCACATGTGCCTTTCA 59.522 50.000 20.81 0.00 0.00 2.69
7470 8305 1.076024 AGTCCCACATGTGCCTTTCAT 59.924 47.619 20.81 0.00 0.00 2.57
7471 8306 1.895131 GTCCCACATGTGCCTTTCATT 59.105 47.619 20.81 0.00 0.00 2.57
7472 8307 2.299867 GTCCCACATGTGCCTTTCATTT 59.700 45.455 20.81 0.00 0.00 2.32
7473 8308 2.971330 TCCCACATGTGCCTTTCATTTT 59.029 40.909 20.81 0.00 0.00 1.82
7474 8309 3.006752 TCCCACATGTGCCTTTCATTTTC 59.993 43.478 20.81 0.00 0.00 2.29
7475 8310 3.007182 CCCACATGTGCCTTTCATTTTCT 59.993 43.478 20.81 0.00 0.00 2.52
7476 8311 4.503643 CCCACATGTGCCTTTCATTTTCTT 60.504 41.667 20.81 0.00 0.00 2.52
7477 8312 5.279406 CCCACATGTGCCTTTCATTTTCTTA 60.279 40.000 20.81 0.00 0.00 2.10
7478 8313 5.865552 CCACATGTGCCTTTCATTTTCTTAG 59.134 40.000 20.81 0.00 0.00 2.18
7479 8314 6.294675 CCACATGTGCCTTTCATTTTCTTAGA 60.295 38.462 20.81 0.00 0.00 2.10
7480 8315 7.147312 CACATGTGCCTTTCATTTTCTTAGAA 58.853 34.615 13.94 0.00 0.00 2.10
7481 8316 7.327761 CACATGTGCCTTTCATTTTCTTAGAAG 59.672 37.037 13.94 0.00 0.00 2.85
7482 8317 6.959639 TGTGCCTTTCATTTTCTTAGAAGT 57.040 33.333 0.00 0.00 0.00 3.01
7483 8318 6.738114 TGTGCCTTTCATTTTCTTAGAAGTG 58.262 36.000 0.00 0.00 0.00 3.16
7484 8319 5.631096 GTGCCTTTCATTTTCTTAGAAGTGC 59.369 40.000 0.00 0.00 0.00 4.40
7485 8320 5.536161 TGCCTTTCATTTTCTTAGAAGTGCT 59.464 36.000 0.00 0.00 0.00 4.40
7486 8321 5.860716 GCCTTTCATTTTCTTAGAAGTGCTG 59.139 40.000 0.00 0.00 0.00 4.41
7487 8322 5.860716 CCTTTCATTTTCTTAGAAGTGCTGC 59.139 40.000 0.00 0.00 0.00 5.25
7488 8323 4.668576 TCATTTTCTTAGAAGTGCTGCG 57.331 40.909 0.00 0.00 0.00 5.18
7489 8324 4.065088 TCATTTTCTTAGAAGTGCTGCGT 58.935 39.130 0.00 0.00 0.00 5.24
7490 8325 5.234752 TCATTTTCTTAGAAGTGCTGCGTA 58.765 37.500 0.00 0.00 0.00 4.42
7491 8326 5.874810 TCATTTTCTTAGAAGTGCTGCGTAT 59.125 36.000 0.00 0.00 0.00 3.06
7492 8327 5.530519 TTTTCTTAGAAGTGCTGCGTATG 57.469 39.130 0.00 0.00 0.00 2.39
7493 8328 3.165058 TCTTAGAAGTGCTGCGTATGG 57.835 47.619 0.00 0.00 0.00 2.74
7494 8329 2.496070 TCTTAGAAGTGCTGCGTATGGT 59.504 45.455 0.00 0.00 0.00 3.55
7495 8330 2.293677 TAGAAGTGCTGCGTATGGTG 57.706 50.000 0.00 0.00 0.00 4.17
7496 8331 0.608130 AGAAGTGCTGCGTATGGTGA 59.392 50.000 0.00 0.00 0.00 4.02
7497 8332 1.208052 AGAAGTGCTGCGTATGGTGAT 59.792 47.619 0.00 0.00 0.00 3.06
7498 8333 2.430694 AGAAGTGCTGCGTATGGTGATA 59.569 45.455 0.00 0.00 0.00 2.15
7499 8334 2.515926 AGTGCTGCGTATGGTGATAG 57.484 50.000 0.00 0.00 0.00 2.08
7500 8335 2.031870 AGTGCTGCGTATGGTGATAGA 58.968 47.619 0.00 0.00 0.00 1.98
7501 8336 2.430694 AGTGCTGCGTATGGTGATAGAA 59.569 45.455 0.00 0.00 0.00 2.10
7502 8337 3.118775 AGTGCTGCGTATGGTGATAGAAA 60.119 43.478 0.00 0.00 0.00 2.52
7503 8338 3.246226 GTGCTGCGTATGGTGATAGAAAG 59.754 47.826 0.00 0.00 0.00 2.62
7504 8339 2.802816 GCTGCGTATGGTGATAGAAAGG 59.197 50.000 0.00 0.00 0.00 3.11
7505 8340 3.492656 GCTGCGTATGGTGATAGAAAGGA 60.493 47.826 0.00 0.00 0.00 3.36
7506 8341 4.302455 CTGCGTATGGTGATAGAAAGGAG 58.698 47.826 0.00 0.00 0.00 3.69
7507 8342 3.069586 TGCGTATGGTGATAGAAAGGAGG 59.930 47.826 0.00 0.00 0.00 4.30
7508 8343 3.654414 CGTATGGTGATAGAAAGGAGGC 58.346 50.000 0.00 0.00 0.00 4.70
7509 8344 3.555168 CGTATGGTGATAGAAAGGAGGCC 60.555 52.174 0.00 0.00 0.00 5.19
7510 8345 1.213296 TGGTGATAGAAAGGAGGCCC 58.787 55.000 0.00 0.00 0.00 5.80
7511 8346 1.213296 GGTGATAGAAAGGAGGCCCA 58.787 55.000 0.00 0.00 33.88 5.36
7512 8347 1.134068 GGTGATAGAAAGGAGGCCCAC 60.134 57.143 0.00 0.00 33.88 4.61
7513 8348 1.840635 GTGATAGAAAGGAGGCCCACT 59.159 52.381 0.00 0.00 33.88 4.00
7514 8349 2.239907 GTGATAGAAAGGAGGCCCACTT 59.760 50.000 0.00 0.25 33.88 3.16
7515 8350 2.239654 TGATAGAAAGGAGGCCCACTTG 59.760 50.000 10.03 0.00 33.88 3.16
7516 8351 1.742308 TAGAAAGGAGGCCCACTTGT 58.258 50.000 10.03 4.34 33.88 3.16
7517 8352 0.853530 AGAAAGGAGGCCCACTTGTT 59.146 50.000 10.03 0.00 33.88 2.83
7518 8353 1.202940 AGAAAGGAGGCCCACTTGTTC 60.203 52.381 10.03 5.65 33.88 3.18
7519 8354 0.853530 AAAGGAGGCCCACTTGTTCT 59.146 50.000 10.03 0.00 33.88 3.01
7520 8355 0.402121 AAGGAGGCCCACTTGTTCTC 59.598 55.000 8.62 0.00 33.88 2.87
7521 8356 0.474660 AGGAGGCCCACTTGTTCTCT 60.475 55.000 0.00 0.00 33.88 3.10
7522 8357 0.035915 GGAGGCCCACTTGTTCTCTC 60.036 60.000 0.00 0.00 0.00 3.20
7523 8358 0.687354 GAGGCCCACTTGTTCTCTCA 59.313 55.000 0.00 0.00 0.00 3.27
7524 8359 0.689623 AGGCCCACTTGTTCTCTCAG 59.310 55.000 0.00 0.00 0.00 3.35
7525 8360 0.957888 GGCCCACTTGTTCTCTCAGC 60.958 60.000 0.00 0.00 0.00 4.26
7526 8361 0.036022 GCCCACTTGTTCTCTCAGCT 59.964 55.000 0.00 0.00 0.00 4.24
7527 8362 1.276421 GCCCACTTGTTCTCTCAGCTA 59.724 52.381 0.00 0.00 0.00 3.32
7528 8363 2.093235 GCCCACTTGTTCTCTCAGCTAT 60.093 50.000 0.00 0.00 0.00 2.97
7529 8364 3.133003 GCCCACTTGTTCTCTCAGCTATA 59.867 47.826 0.00 0.00 0.00 1.31
7530 8365 4.202305 GCCCACTTGTTCTCTCAGCTATAT 60.202 45.833 0.00 0.00 0.00 0.86
7531 8366 5.686124 GCCCACTTGTTCTCTCAGCTATATT 60.686 44.000 0.00 0.00 0.00 1.28
7532 8367 5.988561 CCCACTTGTTCTCTCAGCTATATTC 59.011 44.000 0.00 0.00 0.00 1.75
7533 8368 6.183360 CCCACTTGTTCTCTCAGCTATATTCT 60.183 42.308 0.00 0.00 0.00 2.40
7534 8369 7.271511 CCACTTGTTCTCTCAGCTATATTCTT 58.728 38.462 0.00 0.00 0.00 2.52
7535 8370 7.768120 CCACTTGTTCTCTCAGCTATATTCTTT 59.232 37.037 0.00 0.00 0.00 2.52
7536 8371 9.160496 CACTTGTTCTCTCAGCTATATTCTTTT 57.840 33.333 0.00 0.00 0.00 2.27
7537 8372 9.732130 ACTTGTTCTCTCAGCTATATTCTTTTT 57.268 29.630 0.00 0.00 0.00 1.94
7539 8374 8.723942 TGTTCTCTCAGCTATATTCTTTTTCC 57.276 34.615 0.00 0.00 0.00 3.13
7540 8375 8.543774 TGTTCTCTCAGCTATATTCTTTTTCCT 58.456 33.333 0.00 0.00 0.00 3.36
7541 8376 9.040939 GTTCTCTCAGCTATATTCTTTTTCCTC 57.959 37.037 0.00 0.00 0.00 3.71
7542 8377 8.546083 TCTCTCAGCTATATTCTTTTTCCTCT 57.454 34.615 0.00 0.00 0.00 3.69
7543 8378 9.647918 TCTCTCAGCTATATTCTTTTTCCTCTA 57.352 33.333 0.00 0.00 0.00 2.43
7553 8388 9.807921 ATATTCTTTTTCCTCTAAGTTGAACCA 57.192 29.630 0.00 0.00 0.00 3.67
7554 8389 7.568199 TTCTTTTTCCTCTAAGTTGAACCAG 57.432 36.000 0.00 0.00 0.00 4.00
7555 8390 6.895782 TCTTTTTCCTCTAAGTTGAACCAGA 58.104 36.000 0.00 0.00 0.00 3.86
7556 8391 6.992715 TCTTTTTCCTCTAAGTTGAACCAGAG 59.007 38.462 14.39 14.39 35.36 3.35
7559 8394 3.618690 CTCTAAGTTGAACCAGAGGGG 57.381 52.381 13.80 0.00 44.81 4.79
7560 8395 3.173965 CTCTAAGTTGAACCAGAGGGGA 58.826 50.000 13.80 0.00 41.15 4.81
7561 8396 3.777522 CTCTAAGTTGAACCAGAGGGGAT 59.222 47.826 13.80 0.00 41.15 3.85
7562 8397 3.775316 TCTAAGTTGAACCAGAGGGGATC 59.225 47.826 0.00 0.00 41.15 3.36
7563 8398 0.905357 AGTTGAACCAGAGGGGATCG 59.095 55.000 0.00 0.00 41.20 3.69
7564 8399 0.902531 GTTGAACCAGAGGGGATCGA 59.097 55.000 0.00 0.00 41.20 3.59
7565 8400 1.278127 GTTGAACCAGAGGGGATCGAA 59.722 52.381 0.00 0.00 41.20 3.71
7566 8401 0.902531 TGAACCAGAGGGGATCGAAC 59.097 55.000 0.00 0.00 41.20 3.95
7567 8402 0.179108 GAACCAGAGGGGATCGAACG 60.179 60.000 0.00 0.00 41.15 3.95
7568 8403 0.903454 AACCAGAGGGGATCGAACGT 60.903 55.000 0.00 0.00 41.15 3.99
7569 8404 1.321074 ACCAGAGGGGATCGAACGTC 61.321 60.000 0.00 0.00 41.15 4.34
7570 8405 1.064296 CAGAGGGGATCGAACGTCG 59.936 63.158 0.00 0.00 42.10 5.12
7571 8406 1.378250 AGAGGGGATCGAACGTCGT 60.378 57.895 0.00 0.00 41.35 4.34
7572 8407 1.226603 GAGGGGATCGAACGTCGTG 60.227 63.158 0.00 0.00 41.35 4.35
7573 8408 1.651240 GAGGGGATCGAACGTCGTGA 61.651 60.000 0.00 0.00 41.35 4.35
7574 8409 1.035932 AGGGGATCGAACGTCGTGAT 61.036 55.000 0.00 0.00 41.35 3.06
7575 8410 0.870307 GGGGATCGAACGTCGTGATG 60.870 60.000 0.00 0.00 41.35 3.07
7576 8411 0.870307 GGGATCGAACGTCGTGATGG 60.870 60.000 0.00 0.00 41.35 3.51
7577 8412 0.179145 GGATCGAACGTCGTGATGGT 60.179 55.000 0.00 0.00 41.35 3.55
7578 8413 1.625616 GATCGAACGTCGTGATGGTT 58.374 50.000 0.00 0.00 41.35 3.67
7579 8414 1.582502 GATCGAACGTCGTGATGGTTC 59.417 52.381 0.00 6.67 41.35 3.62
7581 8416 3.096541 GAACGTCGTGATGGTTCGA 57.903 52.632 0.00 0.00 31.82 3.71
7585 8420 3.031660 GTCGTGATGGTTCGACCTC 57.968 57.895 6.46 2.63 46.83 3.85
7586 8421 0.458025 GTCGTGATGGTTCGACCTCC 60.458 60.000 6.46 0.50 46.83 4.30
7587 8422 0.611062 TCGTGATGGTTCGACCTCCT 60.611 55.000 5.77 0.00 39.58 3.69
7588 8423 0.246635 CGTGATGGTTCGACCTCCTT 59.753 55.000 5.77 0.00 39.58 3.36
7589 8424 1.337823 CGTGATGGTTCGACCTCCTTT 60.338 52.381 5.77 0.00 39.58 3.11
7590 8425 2.076863 GTGATGGTTCGACCTCCTTTG 58.923 52.381 5.77 0.00 39.58 2.77
7591 8426 1.974957 TGATGGTTCGACCTCCTTTGA 59.025 47.619 5.77 0.00 39.58 2.69
7592 8427 2.571653 TGATGGTTCGACCTCCTTTGAT 59.428 45.455 5.77 0.00 39.58 2.57
7593 8428 3.772572 TGATGGTTCGACCTCCTTTGATA 59.227 43.478 5.77 0.00 39.58 2.15
7594 8429 3.604875 TGGTTCGACCTCCTTTGATAC 57.395 47.619 5.77 0.00 39.58 2.24
7595 8430 2.235402 TGGTTCGACCTCCTTTGATACC 59.765 50.000 5.77 0.00 39.58 2.73
7596 8431 2.419713 GGTTCGACCTCCTTTGATACCC 60.420 54.545 0.00 0.00 34.73 3.69
7597 8432 1.492764 TCGACCTCCTTTGATACCCC 58.507 55.000 0.00 0.00 0.00 4.95
7598 8433 0.468648 CGACCTCCTTTGATACCCCC 59.531 60.000 0.00 0.00 0.00 5.40
7599 8434 1.894699 GACCTCCTTTGATACCCCCT 58.105 55.000 0.00 0.00 0.00 4.79
7600 8435 1.769465 GACCTCCTTTGATACCCCCTC 59.231 57.143 0.00 0.00 0.00 4.30
7601 8436 1.141185 CCTCCTTTGATACCCCCTCC 58.859 60.000 0.00 0.00 0.00 4.30
7602 8437 1.345526 CCTCCTTTGATACCCCCTCCT 60.346 57.143 0.00 0.00 0.00 3.69
7603 8438 2.090153 CCTCCTTTGATACCCCCTCCTA 60.090 54.545 0.00 0.00 0.00 2.94
7604 8439 3.441658 CCTCCTTTGATACCCCCTCCTAT 60.442 52.174 0.00 0.00 0.00 2.57
7605 8440 3.841255 CTCCTTTGATACCCCCTCCTATC 59.159 52.174 0.00 0.00 0.00 2.08
7606 8441 2.567615 CCTTTGATACCCCCTCCTATCG 59.432 54.545 0.00 0.00 0.00 2.92
7607 8442 3.507411 CTTTGATACCCCCTCCTATCGA 58.493 50.000 0.00 0.00 0.00 3.59
7608 8443 3.847042 TTGATACCCCCTCCTATCGAT 57.153 47.619 2.16 2.16 0.00 3.59
7609 8444 4.959522 TTGATACCCCCTCCTATCGATA 57.040 45.455 4.78 4.78 0.00 2.92
7610 8445 4.246712 TGATACCCCCTCCTATCGATAC 57.753 50.000 0.00 0.00 0.00 2.24
7611 8446 3.053095 TGATACCCCCTCCTATCGATACC 60.053 52.174 0.00 0.00 0.00 2.73
7612 8447 1.469082 ACCCCCTCCTATCGATACCT 58.531 55.000 0.00 0.00 0.00 3.08
7613 8448 1.358445 ACCCCCTCCTATCGATACCTC 59.642 57.143 0.00 0.00 0.00 3.85
7614 8449 1.342175 CCCCCTCCTATCGATACCTCC 60.342 61.905 0.00 0.00 0.00 4.30
7615 8450 1.641714 CCCCTCCTATCGATACCTCCT 59.358 57.143 0.00 0.00 0.00 3.69
7616 8451 2.357361 CCCCTCCTATCGATACCTCCTC 60.357 59.091 0.00 0.00 0.00 3.71
7617 8452 2.309162 CCCTCCTATCGATACCTCCTCA 59.691 54.545 0.00 0.00 0.00 3.86
7618 8453 3.349022 CCTCCTATCGATACCTCCTCAC 58.651 54.545 0.00 0.00 0.00 3.51
7619 8454 3.244946 CCTCCTATCGATACCTCCTCACA 60.245 52.174 0.00 0.00 0.00 3.58
7620 8455 3.752665 TCCTATCGATACCTCCTCACAC 58.247 50.000 0.00 0.00 0.00 3.82
7621 8456 2.820787 CCTATCGATACCTCCTCACACC 59.179 54.545 0.00 0.00 0.00 4.16
7622 8457 1.705873 ATCGATACCTCCTCACACCC 58.294 55.000 0.00 0.00 0.00 4.61
7623 8458 0.396695 TCGATACCTCCTCACACCCC 60.397 60.000 0.00 0.00 0.00 4.95
7624 8459 0.686441 CGATACCTCCTCACACCCCA 60.686 60.000 0.00 0.00 0.00 4.96
7625 8460 0.831307 GATACCTCCTCACACCCCAC 59.169 60.000 0.00 0.00 0.00 4.61
7626 8461 0.976073 ATACCTCCTCACACCCCACG 60.976 60.000 0.00 0.00 0.00 4.94
7627 8462 2.376225 TACCTCCTCACACCCCACGT 62.376 60.000 0.00 0.00 0.00 4.49
7628 8463 1.608336 CCTCCTCACACCCCACGTA 60.608 63.158 0.00 0.00 0.00 3.57
7629 8464 1.590147 CTCCTCACACCCCACGTAC 59.410 63.158 0.00 0.00 0.00 3.67
7630 8465 2.209064 CTCCTCACACCCCACGTACG 62.209 65.000 15.01 15.01 0.00 3.67
7631 8466 2.270257 CCTCACACCCCACGTACGA 61.270 63.158 24.41 0.00 0.00 3.43
7632 8467 1.601419 CCTCACACCCCACGTACGAT 61.601 60.000 24.41 3.10 0.00 3.73
7633 8468 0.179145 CTCACACCCCACGTACGATC 60.179 60.000 24.41 0.00 0.00 3.69
7634 8469 1.153706 CACACCCCACGTACGATCC 60.154 63.158 24.41 0.00 0.00 3.36
7635 8470 2.353610 ACACCCCACGTACGATCCC 61.354 63.158 24.41 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 1.616994 GCTTCTGGGTTGGCTTGGTAT 60.617 52.381 0.00 0.00 0.00 2.73
8 9 0.251165 GCTTCTGGGTTGGCTTGGTA 60.251 55.000 0.00 0.00 0.00 3.25
94 96 2.516906 GGAAAACACCCCACGGATTTA 58.483 47.619 0.00 0.00 0.00 1.40
112 116 0.105709 TGGATCCACGCTATGAGGGA 60.106 55.000 11.44 0.00 31.91 4.20
117 121 0.941463 GCGACTGGATCCACGCTATG 60.941 60.000 31.62 16.45 46.06 2.23
175 180 6.437793 TCCTTCTATTTCTCGTCCTTCTTCTT 59.562 38.462 0.00 0.00 0.00 2.52
222 230 1.289066 CTCCCAAGACGACGAGCAA 59.711 57.895 0.00 0.00 0.00 3.91
254 272 4.614036 CAACCACCCACCCCCACC 62.614 72.222 0.00 0.00 0.00 4.61
526 549 2.665000 CCTGTGTGGCACGGAGAT 59.335 61.111 13.77 0.00 42.79 2.75
631 654 4.380843 TCTGGCCTGATTACCTCAAAAA 57.619 40.909 8.48 0.00 32.14 1.94
632 655 4.380843 TTCTGGCCTGATTACCTCAAAA 57.619 40.909 13.72 0.00 32.14 2.44
633 656 4.380843 TTTCTGGCCTGATTACCTCAAA 57.619 40.909 13.72 0.00 32.14 2.69
634 657 4.380843 TTTTCTGGCCTGATTACCTCAA 57.619 40.909 13.72 0.00 32.14 3.02
635 658 4.263905 ACATTTTCTGGCCTGATTACCTCA 60.264 41.667 13.72 0.00 0.00 3.86
636 659 4.273318 ACATTTTCTGGCCTGATTACCTC 58.727 43.478 13.72 0.00 0.00 3.85
637 660 4.322057 ACATTTTCTGGCCTGATTACCT 57.678 40.909 13.72 0.00 0.00 3.08
638 661 5.885912 TCTAACATTTTCTGGCCTGATTACC 59.114 40.000 13.72 0.00 0.00 2.85
639 662 7.067494 ACATCTAACATTTTCTGGCCTGATTAC 59.933 37.037 13.72 0.00 0.00 1.89
640 663 7.067372 CACATCTAACATTTTCTGGCCTGATTA 59.933 37.037 13.72 7.67 0.00 1.75
641 664 5.954150 ACATCTAACATTTTCTGGCCTGATT 59.046 36.000 13.72 6.89 0.00 2.57
642 665 5.359009 CACATCTAACATTTTCTGGCCTGAT 59.641 40.000 13.72 0.00 0.00 2.90
643 666 4.701651 CACATCTAACATTTTCTGGCCTGA 59.298 41.667 8.48 8.48 0.00 3.86
644 667 4.676196 GCACATCTAACATTTTCTGGCCTG 60.676 45.833 3.32 2.92 0.00 4.85
645 668 3.445096 GCACATCTAACATTTTCTGGCCT 59.555 43.478 3.32 0.00 0.00 5.19
646 669 3.731867 CGCACATCTAACATTTTCTGGCC 60.732 47.826 0.00 0.00 0.00 5.36
647 670 3.429085 CGCACATCTAACATTTTCTGGC 58.571 45.455 0.00 0.00 0.00 4.85
648 671 3.127548 AGCGCACATCTAACATTTTCTGG 59.872 43.478 11.47 0.00 0.00 3.86
649 672 4.093514 CAGCGCACATCTAACATTTTCTG 58.906 43.478 11.47 0.00 0.00 3.02
650 673 3.426695 GCAGCGCACATCTAACATTTTCT 60.427 43.478 11.47 0.00 0.00 2.52
651 674 2.848302 GCAGCGCACATCTAACATTTTC 59.152 45.455 11.47 0.00 0.00 2.29
652 675 2.228582 TGCAGCGCACATCTAACATTTT 59.771 40.909 11.47 0.00 31.71 1.82
653 676 1.811965 TGCAGCGCACATCTAACATTT 59.188 42.857 11.47 0.00 31.71 2.32
654 677 1.399440 CTGCAGCGCACATCTAACATT 59.601 47.619 11.47 0.00 33.79 2.71
655 678 1.012086 CTGCAGCGCACATCTAACAT 58.988 50.000 11.47 0.00 33.79 2.71
656 679 1.020861 CCTGCAGCGCACATCTAACA 61.021 55.000 11.47 0.00 33.79 2.41
657 680 1.717937 CCTGCAGCGCACATCTAAC 59.282 57.895 11.47 0.00 33.79 2.34
658 681 2.108514 GCCTGCAGCGCACATCTAA 61.109 57.895 18.68 0.00 33.79 2.10
659 682 2.512286 GCCTGCAGCGCACATCTA 60.512 61.111 18.68 0.00 33.79 1.98
686 709 2.035066 GCCCATGCTTAAATGTGCCTAG 59.965 50.000 0.00 0.00 33.53 3.02
687 710 2.031120 GCCCATGCTTAAATGTGCCTA 58.969 47.619 0.00 0.00 33.53 3.93
745 769 5.627172 GCAAAATAGTCTATTGCAACGTGA 58.373 37.500 0.00 0.00 46.57 4.35
991 1373 2.514824 GCCCTCCATTGCTCCGAC 60.515 66.667 0.00 0.00 0.00 4.79
1104 1501 0.384477 CGGACGCGTACAGCTCTATC 60.384 60.000 23.49 0.00 45.59 2.08
1218 1615 5.982356 TGCTCTAATCAGTAAGCACTCAAT 58.018 37.500 0.00 0.00 39.69 2.57
1228 1625 6.798427 AATCAGAAGGTGCTCTAATCAGTA 57.202 37.500 0.00 0.00 0.00 2.74
1279 1679 1.408422 GCATTTTGCACCACTCGAAC 58.592 50.000 0.00 0.00 44.26 3.95
1291 1691 4.815308 TCAACCAGACCAAATTGCATTTTG 59.185 37.500 21.64 21.64 36.55 2.44
1304 1704 0.667792 GAGTGTCGCTCAACCAGACC 60.668 60.000 8.57 0.00 43.58 3.85
1322 1722 1.757118 CTACTCCCCAATCGCTCAAGA 59.243 52.381 0.00 0.00 0.00 3.02
1323 1723 1.482593 ACTACTCCCCAATCGCTCAAG 59.517 52.381 0.00 0.00 0.00 3.02
1334 1734 7.425606 CACAATTATTATGCAAACTACTCCCC 58.574 38.462 0.00 0.00 0.00 4.81
1371 1772 3.607775 CGCACCAAAACTCAGATGTTCTG 60.608 47.826 0.00 0.00 45.59 3.02
1372 1773 2.549754 CGCACCAAAACTCAGATGTTCT 59.450 45.455 0.00 0.00 0.00 3.01
1412 1813 5.408204 AAAGCAATTTTCGCTGAAAAAGG 57.592 34.783 16.43 13.19 43.32 3.11
1487 1894 9.844257 AGAAATTGATCTACAAGAAATAGGAGG 57.156 33.333 0.00 0.00 42.02 4.30
1530 1937 0.748367 GAAGCAAATCCCTCCCGACC 60.748 60.000 0.00 0.00 0.00 4.79
1563 1970 3.495629 CCAATTATCAGCAGGAGCAGCTA 60.496 47.826 0.00 0.00 45.49 3.32
1616 2023 1.273048 GCAAAATCCAGCCATGTGACA 59.727 47.619 0.00 0.00 0.00 3.58
1784 2195 1.621814 GTGGCAGGACTTGTGGTACTA 59.378 52.381 0.00 0.00 36.89 1.82
1785 2196 0.396811 GTGGCAGGACTTGTGGTACT 59.603 55.000 0.00 0.00 40.33 2.73
1786 2197 0.396811 AGTGGCAGGACTTGTGGTAC 59.603 55.000 0.00 0.00 0.00 3.34
1897 2308 4.465512 GACAAGCACATGCCCGCG 62.466 66.667 0.00 0.00 43.38 6.46
1900 2311 1.971167 TTCCGACAAGCACATGCCC 60.971 57.895 0.00 0.00 43.38 5.36
1902 2313 1.210155 GGTTCCGACAAGCACATGC 59.790 57.895 0.00 0.00 42.49 4.06
1924 2335 9.643735 TTTAAGTGGGAAAAAGGAGTGTATTTA 57.356 29.630 0.00 0.00 0.00 1.40
2055 2466 0.108992 TTCCTCGCGCGTACAAGAAT 60.109 50.000 30.98 0.00 0.00 2.40
2065 2476 2.879462 CACCGTAGTTCCTCGCGC 60.879 66.667 0.00 0.00 0.00 6.86
2183 2596 7.420800 GGATTACTCAAAATTGGTCTGCTATG 58.579 38.462 0.00 0.00 0.00 2.23
2384 2798 1.044611 GGCCAAGCAGTTACCCAAAA 58.955 50.000 0.00 0.00 0.00 2.44
2464 2878 5.498393 TCAGCTAGTACTACTGCACTTACT 58.502 41.667 19.45 0.00 0.00 2.24
2465 2879 5.814764 TCAGCTAGTACTACTGCACTTAC 57.185 43.478 19.45 0.00 0.00 2.34
2466 2880 7.339721 AGAAATCAGCTAGTACTACTGCACTTA 59.660 37.037 19.45 9.01 0.00 2.24
2482 2896 4.699257 CAGGTAAGCAGAAAGAAATCAGCT 59.301 41.667 0.00 0.00 43.10 4.24
2500 2919 2.673258 TCACACAGTCTCCAACAGGTA 58.327 47.619 0.00 0.00 0.00 3.08
2512 2931 2.585330 TCCAAATGCACATCACACAGT 58.415 42.857 0.00 0.00 0.00 3.55
2571 2990 1.202687 TGGCTCTGTCCAGAAACACTG 60.203 52.381 0.00 0.00 45.36 3.66
2581 3000 0.107945 GATGGTGAGTGGCTCTGTCC 60.108 60.000 0.00 0.00 0.00 4.02
2584 3003 3.055530 AGTTAAGATGGTGAGTGGCTCTG 60.056 47.826 0.00 0.00 0.00 3.35
2588 3007 3.686726 CAGAAGTTAAGATGGTGAGTGGC 59.313 47.826 0.00 0.00 0.00 5.01
2593 3012 9.914131 CGATAATATCAGAAGTTAAGATGGTGA 57.086 33.333 0.87 0.00 0.00 4.02
2635 3054 4.451096 CACCGATAAATTCCATCCGTTAGG 59.549 45.833 0.00 0.00 39.46 2.69
2640 3059 4.127171 AGAACACCGATAAATTCCATCCG 58.873 43.478 0.00 0.00 0.00 4.18
2744 3163 3.003585 CAGTGCAGCATAAACAGTTGTGA 59.996 43.478 0.00 0.00 0.00 3.58
2775 3194 5.793030 AGTGCTTACTGTGAAGAACTAGT 57.207 39.130 8.15 0.00 42.58 2.57
2985 3404 1.047002 TTGTGTTGGGGCCAGAATTG 58.953 50.000 4.39 0.00 0.00 2.32
3102 3521 3.213206 ACAGGAATGTGCTCACAAGAA 57.787 42.857 6.81 0.00 45.41 2.52
3303 3722 7.104939 TGAAATTATCATTCCCAAAAGCCTTG 58.895 34.615 0.00 0.00 31.50 3.61
3423 3844 6.585695 AAAAATTGAGCACACATCTGAGAT 57.414 33.333 0.00 0.00 0.00 2.75
3424 3845 5.334337 CGAAAAATTGAGCACACATCTGAGA 60.334 40.000 0.00 0.00 0.00 3.27
3433 3854 3.156511 TGTTGCGAAAAATTGAGCACA 57.843 38.095 0.00 0.00 39.51 4.57
3442 3867 4.864806 TGCAGTAAACATTGTTGCGAAAAA 59.135 33.333 2.13 0.00 37.58 1.94
3466 3891 4.964262 ACGGGTTAGAATAGTATCACCCAA 59.036 41.667 7.87 0.00 43.72 4.12
3533 3980 6.093633 TCTGAGCAATCAACATTCAATCAGAG 59.906 38.462 0.00 0.00 36.61 3.35
3536 3983 6.376018 TGATCTGAGCAATCAACATTCAATCA 59.624 34.615 0.00 0.00 30.37 2.57
3578 4104 6.697641 AAATCCAGGGTCTTTTGTAGTCTA 57.302 37.500 0.00 0.00 0.00 2.59
3647 4178 7.400599 AATGCATCATGGTGGATATTCATAC 57.599 36.000 13.88 0.00 29.43 2.39
3774 4310 7.644490 CGATAGGTATCTGCTAGATTATGTCC 58.356 42.308 0.00 0.00 36.20 4.02
3794 4330 9.751542 ACTTATTGTCAAGTTAAGATCCGATAG 57.248 33.333 11.30 0.00 35.16 2.08
3796 4332 9.449719 AAACTTATTGTCAAGTTAAGATCCGAT 57.550 29.630 11.30 0.00 45.68 4.18
3797 4333 8.842358 AAACTTATTGTCAAGTTAAGATCCGA 57.158 30.769 11.30 0.00 45.68 4.55
3798 4334 9.543018 GAAAACTTATTGTCAAGTTAAGATCCG 57.457 33.333 11.30 0.00 45.68 4.18
3862 4442 2.932614 AGTCGTGACAATGATGCTAAGC 59.067 45.455 2.44 0.00 0.00 3.09
3874 4454 4.316205 AACACATACAAGAGTCGTGACA 57.684 40.909 13.29 0.64 35.77 3.58
3993 4573 8.824756 AATCCTGTTTCTGTACAGAGTAGATA 57.175 34.615 23.97 14.59 46.72 1.98
4003 4583 6.200475 GCCGTCTTATAATCCTGTTTCTGTAC 59.800 42.308 0.00 0.00 0.00 2.90
4110 4690 4.214971 AGCAATTGTAGTGCAGAACAGAAG 59.785 41.667 7.40 0.00 44.74 2.85
4245 4825 4.715297 AGTATTATGGACTTGGTCTTCCGT 59.285 41.667 0.00 0.00 34.24 4.69
4373 4958 1.669795 GCTACAAGCCAACAACCATGC 60.670 52.381 0.00 0.00 34.48 4.06
4444 5030 3.891977 GACTACCAGAGACATGAGCCATA 59.108 47.826 0.00 0.00 0.00 2.74
4484 5070 0.039911 AGGGAGACAACCTAGAGCGT 59.960 55.000 0.00 0.00 36.32 5.07
4565 5151 6.698380 ACACTACAATTCTACGAACTCCATT 58.302 36.000 0.00 0.00 0.00 3.16
4596 5187 6.655003 ACATCGATGATTGGAGTTTACACTTT 59.345 34.615 31.33 0.00 31.22 2.66
4617 5208 8.981647 AGTAAATGAAAAGCAATGAACAACATC 58.018 29.630 0.00 0.00 38.38 3.06
4635 5226 3.004629 CACAGTGCTGGCAAAGTAAATGA 59.995 43.478 4.11 0.00 34.19 2.57
4778 5372 3.243535 TGCAAAATTGTTGCCGATGTACA 60.244 39.130 9.05 0.00 44.32 2.90
4799 5393 6.633500 TCTGAGTTGGTAAACAGGAATTTG 57.367 37.500 0.00 0.00 38.88 2.32
4800 5394 7.123547 TGTTTCTGAGTTGGTAAACAGGAATTT 59.876 33.333 0.00 0.00 37.02 1.82
5090 5869 8.729805 AATAGAATCACTCAAGAGAATGAACC 57.270 34.615 3.73 0.00 0.00 3.62
5105 5884 7.761249 CCCTTGGAAATGTGAAAATAGAATCAC 59.239 37.037 0.00 0.00 44.84 3.06
5108 5887 6.441604 AGCCCTTGGAAATGTGAAAATAGAAT 59.558 34.615 0.00 0.00 0.00 2.40
5208 5988 7.875327 AACAACAAAGAGTGTATAACCTTGT 57.125 32.000 0.00 0.00 40.60 3.16
5209 5989 7.647715 CCAAACAACAAAGAGTGTATAACCTTG 59.352 37.037 0.00 0.00 40.60 3.61
5234 6014 4.514816 CCATGTTGGGTCAAACATTTTTCC 59.485 41.667 1.22 0.00 46.19 3.13
5383 6168 5.296283 AGCCTCATACGCGTAGTTATATAGG 59.704 44.000 24.78 19.98 0.00 2.57
5396 6181 2.136196 CTCGGAGGAGCCTCATACGC 62.136 65.000 17.68 0.00 44.40 4.42
5398 6183 2.156098 CTACTCGGAGGAGCCTCATAC 58.844 57.143 17.68 0.00 44.48 2.39
5535 6323 0.527817 GCCCGACTGTCCGACTATTG 60.528 60.000 1.55 0.00 0.00 1.90
5551 6340 6.170506 TGTCCGACTATTGAATATAATGCCC 58.829 40.000 0.00 0.00 0.00 5.36
5552 6341 6.874134 ACTGTCCGACTATTGAATATAATGCC 59.126 38.462 0.00 0.00 0.00 4.40
5553 6342 7.891183 ACTGTCCGACTATTGAATATAATGC 57.109 36.000 0.00 0.00 0.00 3.56
5554 6343 8.712363 CCAACTGTCCGACTATTGAATATAATG 58.288 37.037 13.75 0.00 0.00 1.90
5555 6344 7.878127 CCCAACTGTCCGACTATTGAATATAAT 59.122 37.037 13.75 0.00 0.00 1.28
5556 6345 7.214381 CCCAACTGTCCGACTATTGAATATAA 58.786 38.462 13.75 0.00 0.00 0.98
5557 6346 6.740401 GCCCAACTGTCCGACTATTGAATATA 60.740 42.308 13.75 0.00 0.00 0.86
5559 6348 4.682320 GCCCAACTGTCCGACTATTGAATA 60.682 45.833 13.75 0.00 0.00 1.75
5560 6349 3.873910 CCCAACTGTCCGACTATTGAAT 58.126 45.455 13.75 0.00 0.00 2.57
5561 6350 2.614481 GCCCAACTGTCCGACTATTGAA 60.614 50.000 13.75 0.00 0.00 2.69
5562 6351 1.066430 GCCCAACTGTCCGACTATTGA 60.066 52.381 13.75 0.00 0.00 2.57
5564 6353 0.981183 TGCCCAACTGTCCGACTATT 59.019 50.000 0.00 0.00 0.00 1.73
5565 6354 1.204146 ATGCCCAACTGTCCGACTAT 58.796 50.000 0.00 0.00 0.00 2.12
5566 6355 0.981183 AATGCCCAACTGTCCGACTA 59.019 50.000 0.00 0.00 0.00 2.59
5567 6356 0.981183 TAATGCCCAACTGTCCGACT 59.019 50.000 0.00 0.00 0.00 4.18
5568 6357 2.038387 ATAATGCCCAACTGTCCGAC 57.962 50.000 0.00 0.00 0.00 4.79
5569 6358 4.431416 AATATAATGCCCAACTGTCCGA 57.569 40.909 0.00 0.00 0.00 4.55
5593 6382 8.689061 TGTTCTTCGTAAGCATATCCTTACTAA 58.311 33.333 13.44 8.63 43.06 2.24
5621 6410 5.951747 ACCATAGCATGAAAACAATACCACT 59.048 36.000 0.00 0.00 0.00 4.00
5629 6418 4.218200 CCAACTGACCATAGCATGAAAACA 59.782 41.667 0.00 0.00 0.00 2.83
5633 6422 3.008923 TGTCCAACTGACCATAGCATGAA 59.991 43.478 0.00 0.00 43.78 2.57
5639 6428 9.396022 AGTTAATAAATGTCCAACTGACCATAG 57.604 33.333 0.00 0.00 43.78 2.23
5640 6429 9.747898 AAGTTAATAAATGTCCAACTGACCATA 57.252 29.630 0.00 0.00 43.78 2.74
5728 6517 8.519492 ACTCCAAACGAAACATCAAAAATATG 57.481 30.769 0.00 0.00 0.00 1.78
5739 6528 7.692460 TCTATAGTAGACTCCAAACGAAACA 57.308 36.000 0.00 0.00 0.00 2.83
5816 6605 1.312815 GGTTCTGGCATGTGGATAGC 58.687 55.000 0.00 0.00 0.00 2.97
5819 6608 1.285667 TCATGGTTCTGGCATGTGGAT 59.714 47.619 0.00 0.00 0.00 3.41
5820 6609 0.697658 TCATGGTTCTGGCATGTGGA 59.302 50.000 0.00 0.00 0.00 4.02
5821 6610 1.100510 CTCATGGTTCTGGCATGTGG 58.899 55.000 0.00 0.00 0.00 4.17
5823 6612 0.330604 AGCTCATGGTTCTGGCATGT 59.669 50.000 0.00 0.00 0.00 3.21
5824 6613 0.738975 CAGCTCATGGTTCTGGCATG 59.261 55.000 0.00 0.00 0.00 4.06
5841 6630 2.035832 ACCCGCAAGATTTCAAAACCAG 59.964 45.455 0.00 0.00 43.02 4.00
5848 6637 1.269448 GCTGAAACCCGCAAGATTTCA 59.731 47.619 0.00 0.00 39.42 2.69
5852 6641 0.326264 AGAGCTGAAACCCGCAAGAT 59.674 50.000 0.00 0.00 43.02 2.40
5854 6643 1.363744 CTAGAGCTGAAACCCGCAAG 58.636 55.000 0.00 0.00 0.00 4.01
5855 6644 0.673644 GCTAGAGCTGAAACCCGCAA 60.674 55.000 0.00 0.00 38.21 4.85
5856 6645 1.079127 GCTAGAGCTGAAACCCGCA 60.079 57.895 0.00 0.00 38.21 5.69
5857 6646 1.815840 GGCTAGAGCTGAAACCCGC 60.816 63.158 0.00 0.00 41.70 6.13
5880 6669 3.473625 ACTTTAGTCCCGAACAAGTTGG 58.526 45.455 7.96 0.00 0.00 3.77
5890 6679 5.295152 ACAACAACTAAGACTTTAGTCCCG 58.705 41.667 6.28 0.00 46.75 5.14
5901 6690 8.170553 GTCGTCTTTTTACAACAACAACTAAGA 58.829 33.333 0.00 0.00 0.00 2.10
5927 6734 7.445402 AGAAAATATCATGGAATGTACCCTTCG 59.555 37.037 0.00 0.00 46.80 3.79
5929 6736 8.061304 ACAGAAAATATCATGGAATGTACCCTT 58.939 33.333 0.00 0.00 46.80 3.95
5964 6771 0.394938 TTGGCGGCTTTACAGTCTGA 59.605 50.000 11.43 0.00 0.00 3.27
5965 6772 1.197721 CTTTGGCGGCTTTACAGTCTG 59.802 52.381 11.43 0.00 0.00 3.51
5970 6777 0.948678 GTGACTTTGGCGGCTTTACA 59.051 50.000 11.43 1.45 0.00 2.41
5971 6778 0.948678 TGTGACTTTGGCGGCTTTAC 59.051 50.000 11.43 1.70 0.00 2.01
5973 6780 1.039856 ATTGTGACTTTGGCGGCTTT 58.960 45.000 11.43 0.00 0.00 3.51
5982 6789 8.650490 AGGTCCAAAATATTGAATTGTGACTTT 58.350 29.630 13.62 6.20 38.94 2.66
5983 6790 8.090214 CAGGTCCAAAATATTGAATTGTGACTT 58.910 33.333 13.62 8.14 38.94 3.01
5999 6806 3.714798 AGGTAACAGTCTCAGGTCCAAAA 59.285 43.478 0.00 0.00 41.41 2.44
6044 6851 5.901552 TGTTTCTTCTTGGGAATGTCAAAC 58.098 37.500 0.00 0.00 0.00 2.93
6062 6870 4.202151 ACACAATTCTCTTTGGGCTGTTTC 60.202 41.667 0.00 0.00 33.11 2.78
6068 6876 4.202151 ACTTGAACACAATTCTCTTTGGGC 60.202 41.667 0.00 0.00 33.11 5.36
6165 6974 8.885722 GGAATATAATGTTCGACTAAACCACAA 58.114 33.333 0.00 0.00 0.00 3.33
6168 6977 7.223193 CACGGAATATAATGTTCGACTAAACCA 59.777 37.037 0.00 0.00 0.00 3.67
6246 7055 8.340443 CACATTCAAGTGACCATATATCAACAG 58.660 37.037 0.00 0.00 42.05 3.16
6379 7188 2.647158 GCGGAGAGAAAGGACCGGT 61.647 63.158 6.92 6.92 44.61 5.28
6380 7189 2.167398 TTGCGGAGAGAAAGGACCGG 62.167 60.000 0.00 0.00 44.61 5.28
6389 7198 2.866523 ATACCCCGGTTGCGGAGAGA 62.867 60.000 0.00 0.00 0.00 3.10
6402 7211 9.936759 TTGAAAAACAAATTCATTAGATACCCC 57.063 29.630 0.00 0.00 36.72 4.95
6425 7234 0.326595 TAATTGCTCCTGCGGGTTGA 59.673 50.000 12.43 0.00 43.34 3.18
6520 7331 1.278238 GCGAGGAGTTGGTAACGATG 58.722 55.000 0.00 0.00 42.51 3.84
6629 7447 7.793902 TGAACAGCTACTCGAAAAATTACTTC 58.206 34.615 0.00 0.00 0.00 3.01
6674 7492 9.489084 GGAAAGAAAATAAACATTAGCACCTTT 57.511 29.630 0.00 0.00 0.00 3.11
6696 7514 4.905456 TCCTTCTCCTACAAGAGTTGGAAA 59.095 41.667 0.00 0.00 46.53 3.13
6746 7564 5.125578 CCCAGAATAAGCTACCAAAAGTTCC 59.874 44.000 0.00 0.00 0.00 3.62
6876 7695 3.620488 TCCCAACACATAAGCATCCTTC 58.380 45.455 0.00 0.00 32.47 3.46
6903 7724 8.993121 CGAGCAACACAAATAATCCTCTAATAT 58.007 33.333 0.00 0.00 0.00 1.28
6904 7725 7.985184 ACGAGCAACACAAATAATCCTCTAATA 59.015 33.333 0.00 0.00 0.00 0.98
6944 7765 6.658188 TTTTTCAAAATAATGGGAGACGGT 57.342 33.333 0.00 0.00 0.00 4.83
6946 7767 9.289303 CTGTATTTTTCAAAATAATGGGAGACG 57.711 33.333 6.34 0.00 41.14 4.18
6981 7803 3.421844 GGCACCATTGACTACCTCTTTT 58.578 45.455 0.00 0.00 0.00 2.27
6982 7804 3.073274 GGCACCATTGACTACCTCTTT 57.927 47.619 0.00 0.00 0.00 2.52
6983 7805 2.789409 GGCACCATTGACTACCTCTT 57.211 50.000 0.00 0.00 0.00 2.85
6998 7820 1.882623 CTCAGGTTTTTCTCAGGGCAC 59.117 52.381 0.00 0.00 0.00 5.01
7118 7951 1.602377 GCACAGAAAAGTAGCAACGGT 59.398 47.619 0.00 0.00 0.00 4.83
7154 7987 4.229096 CAAAAGGCACATACATCACACAC 58.771 43.478 0.00 0.00 0.00 3.82
7156 7989 4.216257 AGACAAAAGGCACATACATCACAC 59.784 41.667 0.00 0.00 0.00 3.82
7236 8071 1.527380 GGTGAAAACCCCACTGCGA 60.527 57.895 0.00 0.00 35.05 5.10
7387 8222 5.850557 TTGACGGGATCAAATTGCATATT 57.149 34.783 0.00 0.00 44.59 1.28
7416 8251 9.822185 GGGTCTTATCAAATTGCATATTTCTTT 57.178 29.630 0.00 0.00 0.00 2.52
7417 8252 8.424133 GGGGTCTTATCAAATTGCATATTTCTT 58.576 33.333 0.00 0.00 0.00 2.52
7418 8253 7.786464 AGGGGTCTTATCAAATTGCATATTTCT 59.214 33.333 0.00 0.00 0.00 2.52
7419 8254 7.955918 AGGGGTCTTATCAAATTGCATATTTC 58.044 34.615 0.00 0.00 0.00 2.17
7420 8255 7.015584 GGAGGGGTCTTATCAAATTGCATATTT 59.984 37.037 0.00 0.00 0.00 1.40
7421 8256 6.494835 GGAGGGGTCTTATCAAATTGCATATT 59.505 38.462 0.00 0.00 0.00 1.28
7422 8257 6.012745 GGAGGGGTCTTATCAAATTGCATAT 58.987 40.000 0.00 0.00 0.00 1.78
7423 8258 5.103728 TGGAGGGGTCTTATCAAATTGCATA 60.104 40.000 0.00 0.00 0.00 3.14
7424 8259 4.218312 GGAGGGGTCTTATCAAATTGCAT 58.782 43.478 0.00 0.00 0.00 3.96
7425 8260 3.011144 TGGAGGGGTCTTATCAAATTGCA 59.989 43.478 0.00 0.00 0.00 4.08
7426 8261 3.381590 GTGGAGGGGTCTTATCAAATTGC 59.618 47.826 0.00 0.00 0.00 3.56
7427 8262 3.954258 GGTGGAGGGGTCTTATCAAATTG 59.046 47.826 0.00 0.00 0.00 2.32
7428 8263 3.596046 TGGTGGAGGGGTCTTATCAAATT 59.404 43.478 0.00 0.00 0.00 1.82
7429 8264 3.197983 TGGTGGAGGGGTCTTATCAAAT 58.802 45.455 0.00 0.00 0.00 2.32
7430 8265 2.576191 CTGGTGGAGGGGTCTTATCAAA 59.424 50.000 0.00 0.00 0.00 2.69
7431 8266 2.196595 CTGGTGGAGGGGTCTTATCAA 58.803 52.381 0.00 0.00 0.00 2.57
7432 8267 1.080498 ACTGGTGGAGGGGTCTTATCA 59.920 52.381 0.00 0.00 0.00 2.15
7433 8268 1.763545 GACTGGTGGAGGGGTCTTATC 59.236 57.143 0.00 0.00 0.00 1.75
7434 8269 1.625508 GGACTGGTGGAGGGGTCTTAT 60.626 57.143 0.00 0.00 0.00 1.73
7435 8270 0.252558 GGACTGGTGGAGGGGTCTTA 60.253 60.000 0.00 0.00 0.00 2.10
7436 8271 1.539124 GGACTGGTGGAGGGGTCTT 60.539 63.158 0.00 0.00 0.00 3.01
7437 8272 2.122954 GGACTGGTGGAGGGGTCT 59.877 66.667 0.00 0.00 0.00 3.85
7438 8273 3.009714 GGGACTGGTGGAGGGGTC 61.010 72.222 0.00 0.00 0.00 4.46
7439 8274 3.869934 TGGGACTGGTGGAGGGGT 61.870 66.667 0.00 0.00 0.00 4.95
7440 8275 3.330720 GTGGGACTGGTGGAGGGG 61.331 72.222 0.00 0.00 0.00 4.79
7441 8276 1.925455 ATGTGGGACTGGTGGAGGG 60.925 63.158 0.00 0.00 0.00 4.30
7442 8277 1.300963 CATGTGGGACTGGTGGAGG 59.699 63.158 0.00 0.00 0.00 4.30
7443 8278 0.321919 CACATGTGGGACTGGTGGAG 60.322 60.000 18.51 0.00 0.00 3.86
7444 8279 1.760527 CACATGTGGGACTGGTGGA 59.239 57.895 18.51 0.00 0.00 4.02
7445 8280 1.973281 GCACATGTGGGACTGGTGG 60.973 63.158 26.55 0.00 0.00 4.61
7446 8281 1.973281 GGCACATGTGGGACTGGTG 60.973 63.158 26.55 0.00 0.00 4.17
7447 8282 1.719063 AAGGCACATGTGGGACTGGT 61.719 55.000 26.55 0.00 34.12 4.00
7448 8283 0.540365 AAAGGCACATGTGGGACTGG 60.540 55.000 26.55 0.01 34.12 4.00
7449 8284 0.883833 GAAAGGCACATGTGGGACTG 59.116 55.000 26.55 0.88 34.12 3.51
7450 8285 0.478072 TGAAAGGCACATGTGGGACT 59.522 50.000 26.55 6.86 39.59 3.85
7451 8286 1.549203 ATGAAAGGCACATGTGGGAC 58.451 50.000 26.55 10.47 0.00 4.46
7452 8287 2.307496 AATGAAAGGCACATGTGGGA 57.693 45.000 26.55 0.00 0.00 4.37
7453 8288 3.007182 AGAAAATGAAAGGCACATGTGGG 59.993 43.478 26.55 3.18 0.00 4.61
7454 8289 4.261578 AGAAAATGAAAGGCACATGTGG 57.738 40.909 26.55 9.24 0.00 4.17
7455 8290 6.680810 TCTAAGAAAATGAAAGGCACATGTG 58.319 36.000 21.83 21.83 0.00 3.21
7456 8291 6.899393 TCTAAGAAAATGAAAGGCACATGT 57.101 33.333 0.00 0.00 0.00 3.21
7457 8292 7.327761 CACTTCTAAGAAAATGAAAGGCACATG 59.672 37.037 0.00 0.00 0.00 3.21
7458 8293 7.373493 CACTTCTAAGAAAATGAAAGGCACAT 58.627 34.615 0.00 0.00 0.00 3.21
7459 8294 6.735694 GCACTTCTAAGAAAATGAAAGGCACA 60.736 38.462 0.00 0.00 0.00 4.57
7460 8295 5.631096 GCACTTCTAAGAAAATGAAAGGCAC 59.369 40.000 0.00 0.00 0.00 5.01
7461 8296 5.536161 AGCACTTCTAAGAAAATGAAAGGCA 59.464 36.000 0.00 0.00 0.00 4.75
7462 8297 5.860716 CAGCACTTCTAAGAAAATGAAAGGC 59.139 40.000 0.00 0.00 0.00 4.35
7463 8298 5.860716 GCAGCACTTCTAAGAAAATGAAAGG 59.139 40.000 0.00 0.00 0.00 3.11
7464 8299 5.566774 CGCAGCACTTCTAAGAAAATGAAAG 59.433 40.000 0.00 0.00 0.00 2.62
7465 8300 5.008613 ACGCAGCACTTCTAAGAAAATGAAA 59.991 36.000 0.00 0.00 0.00 2.69
7466 8301 4.515191 ACGCAGCACTTCTAAGAAAATGAA 59.485 37.500 0.00 0.00 0.00 2.57
7467 8302 4.065088 ACGCAGCACTTCTAAGAAAATGA 58.935 39.130 0.00 0.00 0.00 2.57
7468 8303 4.410492 ACGCAGCACTTCTAAGAAAATG 57.590 40.909 0.00 0.00 0.00 2.32
7469 8304 5.065218 CCATACGCAGCACTTCTAAGAAAAT 59.935 40.000 0.00 0.00 0.00 1.82
7470 8305 4.391830 CCATACGCAGCACTTCTAAGAAAA 59.608 41.667 0.00 0.00 0.00 2.29
7471 8306 3.932710 CCATACGCAGCACTTCTAAGAAA 59.067 43.478 0.00 0.00 0.00 2.52
7472 8307 3.056107 ACCATACGCAGCACTTCTAAGAA 60.056 43.478 0.00 0.00 0.00 2.52
7473 8308 2.496070 ACCATACGCAGCACTTCTAAGA 59.504 45.455 0.00 0.00 0.00 2.10
7474 8309 2.604914 CACCATACGCAGCACTTCTAAG 59.395 50.000 0.00 0.00 0.00 2.18
7475 8310 2.232696 TCACCATACGCAGCACTTCTAA 59.767 45.455 0.00 0.00 0.00 2.10
7476 8311 1.822371 TCACCATACGCAGCACTTCTA 59.178 47.619 0.00 0.00 0.00 2.10
7477 8312 0.608130 TCACCATACGCAGCACTTCT 59.392 50.000 0.00 0.00 0.00 2.85
7478 8313 1.656652 ATCACCATACGCAGCACTTC 58.343 50.000 0.00 0.00 0.00 3.01
7479 8314 2.430694 TCTATCACCATACGCAGCACTT 59.569 45.455 0.00 0.00 0.00 3.16
7480 8315 2.031870 TCTATCACCATACGCAGCACT 58.968 47.619 0.00 0.00 0.00 4.40
7481 8316 2.509052 TCTATCACCATACGCAGCAC 57.491 50.000 0.00 0.00 0.00 4.40
7482 8317 3.457234 CTTTCTATCACCATACGCAGCA 58.543 45.455 0.00 0.00 0.00 4.41
7483 8318 2.802816 CCTTTCTATCACCATACGCAGC 59.197 50.000 0.00 0.00 0.00 5.25
7484 8319 4.302455 CTCCTTTCTATCACCATACGCAG 58.698 47.826 0.00 0.00 0.00 5.18
7485 8320 3.069586 CCTCCTTTCTATCACCATACGCA 59.930 47.826 0.00 0.00 0.00 5.24
7486 8321 3.654414 CCTCCTTTCTATCACCATACGC 58.346 50.000 0.00 0.00 0.00 4.42
7487 8322 3.555168 GGCCTCCTTTCTATCACCATACG 60.555 52.174 0.00 0.00 0.00 3.06
7488 8323 3.244596 GGGCCTCCTTTCTATCACCATAC 60.245 52.174 0.84 0.00 0.00 2.39
7489 8324 2.979678 GGGCCTCCTTTCTATCACCATA 59.020 50.000 0.84 0.00 0.00 2.74
7490 8325 1.777272 GGGCCTCCTTTCTATCACCAT 59.223 52.381 0.84 0.00 0.00 3.55
7491 8326 1.213296 GGGCCTCCTTTCTATCACCA 58.787 55.000 0.84 0.00 0.00 4.17
7492 8327 1.134068 GTGGGCCTCCTTTCTATCACC 60.134 57.143 4.53 0.00 0.00 4.02
7493 8328 1.840635 AGTGGGCCTCCTTTCTATCAC 59.159 52.381 4.53 0.00 0.00 3.06
7494 8329 2.239654 CAAGTGGGCCTCCTTTCTATCA 59.760 50.000 4.53 0.00 0.00 2.15
7495 8330 2.239907 ACAAGTGGGCCTCCTTTCTATC 59.760 50.000 4.53 0.00 0.00 2.08
7496 8331 2.279173 ACAAGTGGGCCTCCTTTCTAT 58.721 47.619 4.53 0.00 0.00 1.98
7497 8332 1.742308 ACAAGTGGGCCTCCTTTCTA 58.258 50.000 4.53 0.00 0.00 2.10
7498 8333 0.853530 AACAAGTGGGCCTCCTTTCT 59.146 50.000 4.53 0.00 0.00 2.52
7499 8334 1.202940 AGAACAAGTGGGCCTCCTTTC 60.203 52.381 4.53 4.31 0.00 2.62
7500 8335 0.853530 AGAACAAGTGGGCCTCCTTT 59.146 50.000 4.53 0.00 0.00 3.11
7501 8336 0.402121 GAGAACAAGTGGGCCTCCTT 59.598 55.000 4.53 3.95 0.00 3.36
7502 8337 0.474660 AGAGAACAAGTGGGCCTCCT 60.475 55.000 4.53 0.00 0.00 3.69
7503 8338 0.035915 GAGAGAACAAGTGGGCCTCC 60.036 60.000 4.53 0.00 0.00 4.30
7504 8339 0.687354 TGAGAGAACAAGTGGGCCTC 59.313 55.000 4.53 0.00 0.00 4.70
7505 8340 0.689623 CTGAGAGAACAAGTGGGCCT 59.310 55.000 4.53 0.00 0.00 5.19
7506 8341 0.957888 GCTGAGAGAACAAGTGGGCC 60.958 60.000 0.00 0.00 0.00 5.80
7507 8342 0.036022 AGCTGAGAGAACAAGTGGGC 59.964 55.000 0.00 0.00 0.00 5.36
7508 8343 3.902881 ATAGCTGAGAGAACAAGTGGG 57.097 47.619 0.00 0.00 0.00 4.61
7509 8344 6.815089 AGAATATAGCTGAGAGAACAAGTGG 58.185 40.000 0.00 0.00 0.00 4.00
7510 8345 8.715191 AAAGAATATAGCTGAGAGAACAAGTG 57.285 34.615 0.00 0.00 0.00 3.16
7511 8346 9.732130 AAAAAGAATATAGCTGAGAGAACAAGT 57.268 29.630 0.00 0.00 0.00 3.16
7513 8348 9.167311 GGAAAAAGAATATAGCTGAGAGAACAA 57.833 33.333 0.00 0.00 0.00 2.83
7514 8349 8.543774 AGGAAAAAGAATATAGCTGAGAGAACA 58.456 33.333 0.00 0.00 0.00 3.18
7515 8350 8.956533 AGGAAAAAGAATATAGCTGAGAGAAC 57.043 34.615 0.00 0.00 0.00 3.01
7516 8351 8.986991 AGAGGAAAAAGAATATAGCTGAGAGAA 58.013 33.333 0.00 0.00 0.00 2.87
7517 8352 8.546083 AGAGGAAAAAGAATATAGCTGAGAGA 57.454 34.615 0.00 0.00 0.00 3.10
7527 8362 9.807921 TGGTTCAACTTAGAGGAAAAAGAATAT 57.192 29.630 0.00 0.00 0.00 1.28
7528 8363 9.284968 CTGGTTCAACTTAGAGGAAAAAGAATA 57.715 33.333 0.00 0.00 0.00 1.75
7529 8364 7.998964 TCTGGTTCAACTTAGAGGAAAAAGAAT 59.001 33.333 0.00 0.00 0.00 2.40
7530 8365 7.343357 TCTGGTTCAACTTAGAGGAAAAAGAA 58.657 34.615 0.00 0.00 0.00 2.52
7531 8366 6.895782 TCTGGTTCAACTTAGAGGAAAAAGA 58.104 36.000 0.00 0.00 0.00 2.52
7532 8367 7.195839 CTCTGGTTCAACTTAGAGGAAAAAG 57.804 40.000 12.08 0.00 34.46 2.27
7539 8374 3.173965 TCCCCTCTGGTTCAACTTAGAG 58.826 50.000 12.67 12.67 37.11 2.43
7540 8375 3.269592 TCCCCTCTGGTTCAACTTAGA 57.730 47.619 0.00 0.00 34.77 2.10
7541 8376 3.430929 CGATCCCCTCTGGTTCAACTTAG 60.431 52.174 0.00 0.00 33.10 2.18
7542 8377 2.500098 CGATCCCCTCTGGTTCAACTTA 59.500 50.000 0.00 0.00 33.10 2.24
7543 8378 1.279271 CGATCCCCTCTGGTTCAACTT 59.721 52.381 0.00 0.00 33.10 2.66
7544 8379 0.905357 CGATCCCCTCTGGTTCAACT 59.095 55.000 0.00 0.00 33.10 3.16
7545 8380 0.902531 TCGATCCCCTCTGGTTCAAC 59.097 55.000 0.00 0.00 33.10 3.18
7546 8381 1.278127 GTTCGATCCCCTCTGGTTCAA 59.722 52.381 0.00 0.00 33.10 2.69
7547 8382 0.902531 GTTCGATCCCCTCTGGTTCA 59.097 55.000 0.00 0.00 33.10 3.18
7548 8383 0.179108 CGTTCGATCCCCTCTGGTTC 60.179 60.000 0.00 0.00 34.77 3.62
7549 8384 0.903454 ACGTTCGATCCCCTCTGGTT 60.903 55.000 0.00 0.00 34.77 3.67
7550 8385 1.305046 ACGTTCGATCCCCTCTGGT 60.305 57.895 0.00 0.00 34.77 4.00
7551 8386 1.437986 GACGTTCGATCCCCTCTGG 59.562 63.158 0.00 0.00 0.00 3.86
7552 8387 1.064296 CGACGTTCGATCCCCTCTG 59.936 63.158 0.00 0.00 43.74 3.35
7553 8388 1.378250 ACGACGTTCGATCCCCTCT 60.378 57.895 13.06 0.00 43.74 3.69
7554 8389 1.226603 CACGACGTTCGATCCCCTC 60.227 63.158 13.06 0.00 43.74 4.30
7555 8390 1.035932 ATCACGACGTTCGATCCCCT 61.036 55.000 13.06 0.00 43.74 4.79
7556 8391 0.870307 CATCACGACGTTCGATCCCC 60.870 60.000 13.06 0.00 43.74 4.81
7557 8392 0.870307 CCATCACGACGTTCGATCCC 60.870 60.000 13.06 0.00 43.74 3.85
7558 8393 0.179145 ACCATCACGACGTTCGATCC 60.179 55.000 13.06 0.00 43.74 3.36
7559 8394 1.582502 GAACCATCACGACGTTCGATC 59.417 52.381 13.06 0.00 43.74 3.69
7560 8395 1.625616 GAACCATCACGACGTTCGAT 58.374 50.000 13.06 0.00 43.74 3.59
7561 8396 3.096541 GAACCATCACGACGTTCGA 57.903 52.632 13.06 0.00 43.74 3.71
7563 8398 0.706729 GTCGAACCATCACGACGTTC 59.293 55.000 0.00 0.00 46.39 3.95
7564 8399 2.805277 GTCGAACCATCACGACGTT 58.195 52.632 0.00 0.00 46.39 3.99
7565 8400 4.546637 GTCGAACCATCACGACGT 57.453 55.556 0.00 0.00 46.39 4.34
7568 8403 0.611062 AGGAGGTCGAACCATCACGA 60.611 55.000 0.00 0.00 41.95 4.35
7569 8404 0.246635 AAGGAGGTCGAACCATCACG 59.753 55.000 0.00 0.00 41.95 4.35
7570 8405 2.076863 CAAAGGAGGTCGAACCATCAC 58.923 52.381 0.00 0.00 41.95 3.06
7571 8406 1.974957 TCAAAGGAGGTCGAACCATCA 59.025 47.619 0.00 0.00 41.95 3.07
7572 8407 2.762535 TCAAAGGAGGTCGAACCATC 57.237 50.000 0.00 0.00 41.95 3.51
7573 8408 3.118371 GGTATCAAAGGAGGTCGAACCAT 60.118 47.826 0.00 0.00 41.95 3.55
7574 8409 2.235402 GGTATCAAAGGAGGTCGAACCA 59.765 50.000 0.00 0.00 41.95 3.67
7575 8410 2.419713 GGGTATCAAAGGAGGTCGAACC 60.420 54.545 0.00 0.00 38.99 3.62
7576 8411 2.419713 GGGGTATCAAAGGAGGTCGAAC 60.420 54.545 0.00 0.00 0.00 3.95
7577 8412 1.835531 GGGGTATCAAAGGAGGTCGAA 59.164 52.381 0.00 0.00 0.00 3.71
7578 8413 1.492764 GGGGTATCAAAGGAGGTCGA 58.507 55.000 0.00 0.00 0.00 4.20
7579 8414 0.468648 GGGGGTATCAAAGGAGGTCG 59.531 60.000 0.00 0.00 0.00 4.79
7580 8415 1.769465 GAGGGGGTATCAAAGGAGGTC 59.231 57.143 0.00 0.00 0.00 3.85
7581 8416 1.628327 GGAGGGGGTATCAAAGGAGGT 60.628 57.143 0.00 0.00 0.00 3.85
7582 8417 1.141185 GGAGGGGGTATCAAAGGAGG 58.859 60.000 0.00 0.00 0.00 4.30
7583 8418 2.198334 AGGAGGGGGTATCAAAGGAG 57.802 55.000 0.00 0.00 0.00 3.69
7584 8419 3.757461 CGATAGGAGGGGGTATCAAAGGA 60.757 52.174 0.00 0.00 0.00 3.36
7585 8420 2.567615 CGATAGGAGGGGGTATCAAAGG 59.432 54.545 0.00 0.00 0.00 3.11
7586 8421 3.507411 TCGATAGGAGGGGGTATCAAAG 58.493 50.000 0.00 0.00 0.00 2.77
7587 8422 3.623466 TCGATAGGAGGGGGTATCAAA 57.377 47.619 0.00 0.00 0.00 2.69
7588 8423 3.847042 ATCGATAGGAGGGGGTATCAA 57.153 47.619 0.00 0.00 0.00 2.57
7589 8424 3.053095 GGTATCGATAGGAGGGGGTATCA 60.053 52.174 5.09 0.00 0.00 2.15
7590 8425 3.204831 AGGTATCGATAGGAGGGGGTATC 59.795 52.174 5.09 0.00 0.00 2.24
7591 8426 3.204831 GAGGTATCGATAGGAGGGGGTAT 59.795 52.174 5.09 0.00 0.00 2.73
7592 8427 2.579860 GAGGTATCGATAGGAGGGGGTA 59.420 54.545 5.09 0.00 0.00 3.69
7593 8428 1.358445 GAGGTATCGATAGGAGGGGGT 59.642 57.143 5.09 0.00 0.00 4.95
7594 8429 1.342175 GGAGGTATCGATAGGAGGGGG 60.342 61.905 5.09 0.00 0.00 5.40
7595 8430 1.641714 AGGAGGTATCGATAGGAGGGG 59.358 57.143 5.09 0.00 0.00 4.79
7596 8431 2.309162 TGAGGAGGTATCGATAGGAGGG 59.691 54.545 5.09 0.00 0.00 4.30
7597 8432 3.244946 TGTGAGGAGGTATCGATAGGAGG 60.245 52.174 5.09 0.00 0.00 4.30
7598 8433 3.754323 GTGTGAGGAGGTATCGATAGGAG 59.246 52.174 5.09 0.00 0.00 3.69
7599 8434 3.498121 GGTGTGAGGAGGTATCGATAGGA 60.498 52.174 5.09 0.00 0.00 2.94
7600 8435 2.820787 GGTGTGAGGAGGTATCGATAGG 59.179 54.545 5.09 0.00 0.00 2.57
7601 8436 2.820787 GGGTGTGAGGAGGTATCGATAG 59.179 54.545 5.09 0.00 0.00 2.08
7602 8437 2.490351 GGGGTGTGAGGAGGTATCGATA 60.490 54.545 0.00 0.00 0.00 2.92
7603 8438 1.705873 GGGTGTGAGGAGGTATCGAT 58.294 55.000 2.16 2.16 0.00 3.59
7604 8439 0.396695 GGGGTGTGAGGAGGTATCGA 60.397 60.000 0.00 0.00 0.00 3.59
7605 8440 0.686441 TGGGGTGTGAGGAGGTATCG 60.686 60.000 0.00 0.00 0.00 2.92
7606 8441 0.831307 GTGGGGTGTGAGGAGGTATC 59.169 60.000 0.00 0.00 0.00 2.24
7607 8442 0.976073 CGTGGGGTGTGAGGAGGTAT 60.976 60.000 0.00 0.00 0.00 2.73
7608 8443 1.608336 CGTGGGGTGTGAGGAGGTA 60.608 63.158 0.00 0.00 0.00 3.08
7609 8444 2.376225 TACGTGGGGTGTGAGGAGGT 62.376 60.000 0.00 0.00 0.00 3.85
7610 8445 1.608336 TACGTGGGGTGTGAGGAGG 60.608 63.158 0.00 0.00 0.00 4.30
7611 8446 1.590147 GTACGTGGGGTGTGAGGAG 59.410 63.158 0.00 0.00 0.00 3.69
7612 8447 2.270257 CGTACGTGGGGTGTGAGGA 61.270 63.158 7.22 0.00 0.00 3.71
7613 8448 1.601419 ATCGTACGTGGGGTGTGAGG 61.601 60.000 16.05 0.00 0.00 3.86
7614 8449 0.179145 GATCGTACGTGGGGTGTGAG 60.179 60.000 16.05 0.00 0.00 3.51
7615 8450 1.597797 GGATCGTACGTGGGGTGTGA 61.598 60.000 16.05 0.00 0.00 3.58
7616 8451 1.153706 GGATCGTACGTGGGGTGTG 60.154 63.158 16.05 0.00 0.00 3.82
7617 8452 2.353610 GGGATCGTACGTGGGGTGT 61.354 63.158 16.05 0.00 0.00 4.16
7618 8453 2.497770 GGGATCGTACGTGGGGTG 59.502 66.667 16.05 0.00 0.00 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.