Multiple sequence alignment - TraesCS7D01G176700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G176700 chr7D 100.000 8700 0 0 1 8700 128911416 128920115 0.000000e+00 16066.0
1 TraesCS7D01G176700 chr7D 97.282 515 6 1 4211 4725 310987767 310988273 0.000000e+00 867.0
2 TraesCS7D01G176700 chr7D 98.755 482 6 0 4244 4725 418614955 418615436 0.000000e+00 857.0
3 TraesCS7D01G176700 chr7D 85.177 479 39 17 7600 8050 129498892 129498418 6.150000e-126 462.0
4 TraesCS7D01G176700 chr7D 91.776 304 20 3 8096 8396 129498424 129498123 1.350000e-112 418.0
5 TraesCS7D01G176700 chr7A 94.338 1978 65 15 6056 8003 128830858 128832818 0.000000e+00 2988.0
6 TraesCS7D01G176700 chr7A 91.174 2164 80 52 1 2118 128825539 128827637 0.000000e+00 2835.0
7 TraesCS7D01G176700 chr7A 97.134 1291 33 3 4724 6014 128829561 128830847 0.000000e+00 2176.0
8 TraesCS7D01G176700 chr7A 93.598 1437 42 14 2145 3539 128827636 128829064 0.000000e+00 2098.0
9 TraesCS7D01G176700 chr7A 95.728 515 16 3 3697 4211 128829063 128829571 0.000000e+00 824.0
10 TraesCS7D01G176700 chr7A 95.758 330 13 1 8052 8380 128832831 128833160 1.660000e-146 531.0
11 TraesCS7D01G176700 chr7A 87.464 343 33 6 8063 8396 128861594 128861253 3.810000e-103 387.0
12 TraesCS7D01G176700 chr7A 86.505 289 22 5 8409 8691 128833160 128833437 1.420000e-77 302.0
13 TraesCS7D01G176700 chr7A 81.558 385 36 15 7600 7957 128861972 128861596 1.430000e-72 285.0
14 TraesCS7D01G176700 chr7B 86.232 2070 144 74 298 2311 90188939 90190923 0.000000e+00 2113.0
15 TraesCS7D01G176700 chr7B 91.896 617 38 7 6731 7338 90194130 90194743 0.000000e+00 852.0
16 TraesCS7D01G176700 chr7B 83.291 790 83 23 5263 6031 90192590 90193351 0.000000e+00 682.0
17 TraesCS7D01G176700 chr7B 89.865 444 24 11 7612 8040 90194866 90195303 1.280000e-152 551.0
18 TraesCS7D01G176700 chr7B 88.631 431 41 5 2635 3063 90190950 90191374 1.290000e-142 518.0
19 TraesCS7D01G176700 chr7B 93.750 304 11 3 1 300 90188541 90188840 4.790000e-122 449.0
20 TraesCS7D01G176700 chr7B 90.541 296 23 4 4728 5018 90191942 90192237 3.810000e-103 387.0
21 TraesCS7D01G176700 chr7B 90.530 264 25 0 3903 4166 397446682 397446419 5.000000e-92 350.0
22 TraesCS7D01G176700 chr7B 92.735 234 17 0 6497 6730 445663600 445663367 1.080000e-88 339.0
23 TraesCS7D01G176700 chr7B 88.930 271 23 5 8117 8386 90793160 90792896 2.340000e-85 327.0
24 TraesCS7D01G176700 chr7B 90.164 244 15 5 3299 3541 90191501 90191736 8.480000e-80 309.0
25 TraesCS7D01G176700 chr7B 85.093 322 23 12 7600 7899 90793474 90793156 1.100000e-78 305.0
26 TraesCS7D01G176700 chr7B 88.000 225 22 4 5017 5237 90192309 90192532 2.410000e-65 261.0
27 TraesCS7D01G176700 chr7B 93.976 166 9 1 3537 3701 638013598 638013433 5.210000e-62 250.0
28 TraesCS7D01G176700 chr7B 79.153 307 52 10 8397 8694 478831950 478832253 1.480000e-47 202.0
29 TraesCS7D01G176700 chr7B 82.796 186 28 3 8030 8212 90195320 90195504 6.990000e-36 163.0
30 TraesCS7D01G176700 chr7B 100.000 30 0 0 7504 7533 720496906 720496877 1.000000e-03 56.5
31 TraesCS7D01G176700 chr7B 100.000 28 0 0 7504 7531 588916630 588916657 1.600000e-02 52.8
32 TraesCS7D01G176700 chr4D 98.447 515 8 0 4211 4725 508678757 508679271 0.000000e+00 907.0
33 TraesCS7D01G176700 chr4D 97.099 517 7 1 4210 4726 375134598 375134090 0.000000e+00 865.0
34 TraesCS7D01G176700 chr4D 82.222 180 31 1 8396 8575 65856406 65856228 4.210000e-33 154.0
35 TraesCS7D01G176700 chr4D 91.525 59 3 2 6021 6078 82867034 82867091 7.240000e-11 80.5
36 TraesCS7D01G176700 chr4D 89.831 59 5 1 6031 6089 346136104 346136161 3.370000e-09 75.0
37 TraesCS7D01G176700 chr5D 96.893 515 16 0 4211 4725 117875847 117875333 0.000000e+00 863.0
38 TraesCS7D01G176700 chr5D 95.736 516 14 1 4211 4726 310693251 310693758 0.000000e+00 824.0
39 TraesCS7D01G176700 chr5D 95.517 513 19 1 4211 4723 431191626 431192134 0.000000e+00 817.0
40 TraesCS7D01G176700 chr5D 95.210 167 7 1 3536 3701 151671546 151671712 6.700000e-66 263.0
41 TraesCS7D01G176700 chr5D 95.062 162 7 1 3538 3698 343243165 343243326 4.030000e-63 254.0
42 TraesCS7D01G176700 chr5D 91.803 61 2 3 6026 6085 39033196 39033254 2.010000e-11 82.4
43 TraesCS7D01G176700 chr5D 89.655 58 4 2 6035 6092 124915539 124915484 1.210000e-08 73.1
44 TraesCS7D01G176700 chr5D 93.617 47 3 0 2367 2413 162440961 162440915 4.360000e-08 71.3
45 TraesCS7D01G176700 chr1D 98.178 494 9 0 4235 4728 436854991 436854498 0.000000e+00 863.0
46 TraesCS7D01G176700 chr1D 90.875 263 24 0 3901 4163 269856932 269856670 3.860000e-93 353.0
47 TraesCS7D01G176700 chr1D 89.157 83 8 1 8092 8173 382638716 382638634 1.550000e-17 102.0
48 TraesCS7D01G176700 chr1D 89.610 77 8 0 8094 8170 392570496 392570572 2.000000e-16 99.0
49 TraesCS7D01G176700 chr3A 96.429 504 17 1 4222 4725 11078365 11077863 0.000000e+00 830.0
50 TraesCS7D01G176700 chr3A 92.735 234 17 0 6497 6730 375018033 375018266 1.080000e-88 339.0
51 TraesCS7D01G176700 chr3A 80.216 278 49 6 8393 8667 703398368 703398094 4.120000e-48 204.0
52 TraesCS7D01G176700 chr3A 81.053 190 32 4 8397 8584 128569414 128569601 1.960000e-31 148.0
53 TraesCS7D01G176700 chr6B 94.253 261 15 0 3904 4164 288654880 288654620 4.890000e-107 399.0
54 TraesCS7D01G176700 chr6B 90.875 263 24 0 3901 4163 342223931 342223669 3.860000e-93 353.0
55 TraesCS7D01G176700 chrUn 93.284 268 17 1 3901 4168 96301976 96302242 2.280000e-105 394.0
56 TraesCS7D01G176700 chr4A 90.299 268 25 1 3900 4166 12674184 12673917 5.000000e-92 350.0
57 TraesCS7D01G176700 chr3D 90.805 261 24 0 3904 4164 67721296 67721036 5.000000e-92 350.0
58 TraesCS7D01G176700 chr3D 90.164 61 2 4 6032 6089 541072235 541072294 9.370000e-10 76.8
59 TraesCS7D01G176700 chr3B 90.805 261 23 1 3904 4164 687075680 687075939 1.800000e-91 348.0
60 TraesCS7D01G176700 chr3B 92.941 170 11 1 3538 3706 680348945 680348776 6.750000e-61 246.0
61 TraesCS7D01G176700 chr3B 80.412 194 30 6 8387 8575 730806208 730806018 3.270000e-29 141.0
62 TraesCS7D01G176700 chr3B 84.043 94 15 0 8080 8173 821795150 821795057 3.340000e-14 91.6
63 TraesCS7D01G176700 chr3B 94.340 53 1 2 6028 6079 247566247 247566298 7.240000e-11 80.5
64 TraesCS7D01G176700 chr2A 92.797 236 15 2 6496 6730 310406912 310407146 3.010000e-89 340.0
65 TraesCS7D01G176700 chr2A 91.532 248 19 2 6497 6743 449270878 449271124 3.010000e-89 340.0
66 TraesCS7D01G176700 chr2A 93.567 171 9 2 3538 3706 189020998 189020828 4.030000e-63 254.0
67 TraesCS7D01G176700 chr2A 92.857 168 10 2 3538 3703 668451520 668451687 8.730000e-60 243.0
68 TraesCS7D01G176700 chr2A 91.954 174 13 1 3537 3709 722495120 722494947 8.730000e-60 243.0
69 TraesCS7D01G176700 chr2D 92.373 236 16 2 6496 6730 249892020 249891786 1.400000e-87 335.0
70 TraesCS7D01G176700 chr2D 92.340 235 16 2 6497 6731 341699560 341699328 5.030000e-87 333.0
71 TraesCS7D01G176700 chr2D 91.954 174 11 3 3538 3710 399965310 399965139 3.140000e-59 241.0
72 TraesCS7D01G176700 chr2D 81.868 182 25 7 8398 8575 463842478 463842655 7.040000e-31 147.0
73 TraesCS7D01G176700 chr2D 80.833 120 17 5 1025 1141 355292658 355292774 1.200000e-13 89.8
74 TraesCS7D01G176700 chr4B 91.949 236 18 1 6498 6732 315725184 315725419 6.510000e-86 329.0
75 TraesCS7D01G176700 chr4B 94.231 52 1 2 6028 6078 640017309 640017359 2.600000e-10 78.7
76 TraesCS7D01G176700 chr1A 90.726 248 15 6 6499 6742 508148758 508149001 3.030000e-84 324.0
77 TraesCS7D01G176700 chr6D 90.050 201 17 3 988 1186 403976041 403975842 3.120000e-64 257.0
78 TraesCS7D01G176700 chr6D 84.270 178 24 2 8397 8574 83528909 83528736 4.180000e-38 171.0
79 TraesCS7D01G176700 chr6A 91.444 187 16 0 1000 1186 550643622 550643436 3.120000e-64 257.0
80 TraesCS7D01G176700 chr5A 93.976 166 9 1 3536 3700 376346766 376346931 5.210000e-62 250.0
81 TraesCS7D01G176700 chr5A 81.152 191 32 4 8396 8584 680466842 680466654 5.440000e-32 150.0
82 TraesCS7D01G176700 chr5A 75.294 170 34 7 2250 2413 260689617 260689450 3.370000e-09 75.0
83 TraesCS7D01G176700 chr1B 87.059 85 10 1 8092 8176 530053491 530053408 2.590000e-15 95.3
84 TraesCS7D01G176700 chr1B 91.228 57 3 2 6032 6087 645568267 645568322 9.370000e-10 76.8
85 TraesCS7D01G176700 chr1B 100.000 29 0 0 7499 7527 605013364 605013336 4.000000e-03 54.7
86 TraesCS7D01G176700 chr2B 96.078 51 0 2 6032 6081 615265415 615265366 2.010000e-11 82.4
87 TraesCS7D01G176700 chr5B 95.745 47 2 0 2367 2413 180023076 180023122 9.370000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G176700 chr7D 128911416 128920115 8699 False 16066.000000 16066 100.000000 1 8700 1 chr7D.!!$F1 8699
1 TraesCS7D01G176700 chr7D 310987767 310988273 506 False 867.000000 867 97.282000 4211 4725 1 chr7D.!!$F2 514
2 TraesCS7D01G176700 chr7D 129498123 129498892 769 True 440.000000 462 88.476500 7600 8396 2 chr7D.!!$R1 796
3 TraesCS7D01G176700 chr7A 128825539 128833437 7898 False 1679.142857 2988 93.462143 1 8691 7 chr7A.!!$F1 8690
4 TraesCS7D01G176700 chr7A 128861253 128861972 719 True 336.000000 387 84.511000 7600 8396 2 chr7A.!!$R1 796
5 TraesCS7D01G176700 chr7B 90188541 90195504 6963 False 628.500000 2113 88.516600 1 8212 10 chr7B.!!$F3 8211
6 TraesCS7D01G176700 chr7B 90792896 90793474 578 True 316.000000 327 87.011500 7600 8386 2 chr7B.!!$R5 786
7 TraesCS7D01G176700 chr4D 508678757 508679271 514 False 907.000000 907 98.447000 4211 4725 1 chr4D.!!$F3 514
8 TraesCS7D01G176700 chr4D 375134090 375134598 508 True 865.000000 865 97.099000 4210 4726 1 chr4D.!!$R2 516
9 TraesCS7D01G176700 chr5D 117875333 117875847 514 True 863.000000 863 96.893000 4211 4725 1 chr5D.!!$R1 514
10 TraesCS7D01G176700 chr5D 310693251 310693758 507 False 824.000000 824 95.736000 4211 4726 1 chr5D.!!$F3 515
11 TraesCS7D01G176700 chr5D 431191626 431192134 508 False 817.000000 817 95.517000 4211 4723 1 chr5D.!!$F5 512
12 TraesCS7D01G176700 chr3A 11077863 11078365 502 True 830.000000 830 96.429000 4222 4725 1 chr3A.!!$R1 503

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
482 596 1.069258 CCTAATCGGGACCGCCTTC 59.931 63.158 5.75 0.0 39.59 3.46 F
1631 1805 0.030369 GATCCGTTCGCGTGTCCTAT 59.970 55.000 5.77 0.0 39.32 2.57 F
1862 2047 0.393673 GCAAAGAGCTTCCCTCCCTC 60.394 60.000 0.00 0.0 41.74 4.30 F
2540 2771 0.317160 GTTTTGCCGAGGAAAAGGGG 59.683 55.000 4.13 0.0 0.00 4.79 F
3601 3873 0.687920 TGGACCACATACGGAGCAAA 59.312 50.000 0.00 0.0 0.00 3.68 F
4728 5016 0.313987 CGACTCAAAAACCTTGCCCC 59.686 55.000 0.00 0.0 0.00 5.80 F
4731 5019 1.063266 ACTCAAAAACCTTGCCCCTGA 60.063 47.619 0.00 0.0 0.00 3.86 F
5841 6245 1.693062 TGGTTTTGATTGTGCAGGCAT 59.307 42.857 0.00 0.0 0.00 4.40 F
7494 8396 0.041535 TTTGGGCGGAGGGAGTACTA 59.958 55.000 0.00 0.0 0.00 1.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2447 2678 0.099436 GGCTCCAACATGAATGTCGC 59.901 55.000 0.00 3.0 40.80 5.19 R
2448 2679 0.374758 CGGCTCCAACATGAATGTCG 59.625 55.000 0.00 0.0 40.80 4.35 R
3582 3854 0.687920 TTTGCTCCGTATGTGGTCCA 59.312 50.000 0.00 0.0 0.00 4.02 R
3927 4199 0.516877 CAGAAAAGTCAATCGGCGCA 59.483 50.000 10.83 0.0 0.00 6.09 R
5402 5806 2.106857 TGTTAAATTGGAGGACCACGGT 59.893 45.455 0.00 0.0 46.80 4.83 R
6505 7366 1.832366 GGTCTACCCCAACCTCTCTTC 59.168 57.143 0.00 0.0 32.54 2.87 R
6628 7489 3.585862 GCAACCAACTCATAGTTCTCGA 58.414 45.455 0.00 0.0 36.03 4.04 R
7507 8409 0.338814 AACTACTCCCTCCGTCCCAT 59.661 55.000 0.00 0.0 0.00 4.00 R
8608 9621 0.038159 GCGGCGAAGTATGGAGCTAT 60.038 55.000 12.98 0.0 0.00 2.97 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
139 144 2.918345 GCACCATCGCACAGGCAAA 61.918 57.895 0.00 0.00 41.24 3.68
322 431 1.200519 CCCGAATTGGAGGAGTACCA 58.799 55.000 0.00 0.00 42.00 3.25
444 553 1.605738 AGTACTGTTCCGACCCGCT 60.606 57.895 0.00 0.00 0.00 5.52
482 596 1.069258 CCTAATCGGGACCGCCTTC 59.931 63.158 5.75 0.00 39.59 3.46
488 602 2.112815 CGGGACCGCCTTCAATTCC 61.113 63.158 0.00 0.00 0.00 3.01
577 693 3.036431 GGATATTTTCCGGGCCTGG 57.964 57.895 26.30 26.30 33.93 4.45
590 706 2.093973 CGGGCCTGGATCATCAGTATAC 60.094 54.545 2.57 0.00 33.14 1.47
815 943 3.773154 GCTCCCCCTCCTCCTCCT 61.773 72.222 0.00 0.00 0.00 3.69
816 944 2.612251 CTCCCCCTCCTCCTCCTC 59.388 72.222 0.00 0.00 0.00 3.71
817 945 3.036959 TCCCCCTCCTCCTCCTCC 61.037 72.222 0.00 0.00 0.00 4.30
916 1044 4.031314 GCTCCTTCGTTTGTTTGTTTGTTC 59.969 41.667 0.00 0.00 0.00 3.18
920 1048 5.107798 CCTTCGTTTGTTTGTTTGTTCGTTT 60.108 36.000 0.00 0.00 0.00 3.60
941 1069 3.847602 CGGCTGAGCAGGAGGAGG 61.848 72.222 6.82 0.00 0.00 4.30
1212 1345 1.990614 GCCTCTCTTTCCTCCCCGT 60.991 63.158 0.00 0.00 0.00 5.28
1216 1349 0.614979 TCTCTTTCCTCCCCGTCCTG 60.615 60.000 0.00 0.00 0.00 3.86
1222 1355 2.283966 CTCCCCGTCCTGTCACCT 60.284 66.667 0.00 0.00 0.00 4.00
1334 1472 3.923614 CGACTCGATGCGGATTCC 58.076 61.111 0.00 0.00 0.00 3.01
1350 1490 3.842923 CCGGATCCTCGCTGCACT 61.843 66.667 10.75 0.00 0.00 4.40
1357 1497 2.714991 CCTCGCTGCACTGGCTAGA 61.715 63.158 3.17 0.00 41.91 2.43
1394 1543 3.712907 GCCTACCAGCCCGTCCAA 61.713 66.667 0.00 0.00 0.00 3.53
1395 1544 3.074281 CCTACCAGCCCGTCCAAA 58.926 61.111 0.00 0.00 0.00 3.28
1434 1591 2.202566 CGCTTCTAGGTTTCGGATTCC 58.797 52.381 0.00 0.00 0.00 3.01
1454 1611 5.405935 TCCGTTAGGATATCATCACATGG 57.594 43.478 4.83 1.07 42.75 3.66
1455 1612 4.838423 TCCGTTAGGATATCATCACATGGT 59.162 41.667 4.83 0.00 42.75 3.55
1456 1613 4.931601 CCGTTAGGATATCATCACATGGTG 59.068 45.833 4.83 0.00 41.02 4.17
1457 1614 4.389992 CGTTAGGATATCATCACATGGTGC 59.610 45.833 4.83 0.00 32.98 5.01
1480 1638 1.666189 GCTACGAAGAGCCACCATTTC 59.334 52.381 0.00 0.00 36.38 2.17
1481 1639 2.678190 GCTACGAAGAGCCACCATTTCT 60.678 50.000 0.00 0.00 36.38 2.52
1482 1640 3.430374 GCTACGAAGAGCCACCATTTCTA 60.430 47.826 0.00 0.00 36.38 2.10
1486 1644 3.274288 GAAGAGCCACCATTTCTACCTG 58.726 50.000 0.00 0.00 0.00 4.00
1487 1645 2.269940 AGAGCCACCATTTCTACCTGT 58.730 47.619 0.00 0.00 0.00 4.00
1488 1646 2.026822 AGAGCCACCATTTCTACCTGTG 60.027 50.000 0.00 0.00 0.00 3.66
1490 1648 1.463674 CCACCATTTCTACCTGTGGC 58.536 55.000 0.00 0.00 39.95 5.01
1503 1666 1.280133 CCTGTGGCTGAAGATCCTCAA 59.720 52.381 0.00 0.00 0.00 3.02
1505 1668 1.980765 TGTGGCTGAAGATCCTCAAGT 59.019 47.619 0.00 0.00 0.00 3.16
1631 1805 0.030369 GATCCGTTCGCGTGTCCTAT 59.970 55.000 5.77 0.00 39.32 2.57
1859 2044 1.301677 CGTGCAAAGAGCTTCCCTCC 61.302 60.000 0.00 0.00 45.94 4.30
1860 2045 0.962855 GTGCAAAGAGCTTCCCTCCC 60.963 60.000 0.00 0.00 45.94 4.30
1861 2046 1.136329 TGCAAAGAGCTTCCCTCCCT 61.136 55.000 0.00 0.00 45.94 4.20
1862 2047 0.393673 GCAAAGAGCTTCCCTCCCTC 60.394 60.000 0.00 0.00 41.74 4.30
1863 2048 1.284313 CAAAGAGCTTCCCTCCCTCT 58.716 55.000 0.00 0.00 41.74 3.69
1864 2049 1.065564 CAAAGAGCTTCCCTCCCTCTG 60.066 57.143 0.00 0.00 41.74 3.35
1865 2050 0.620121 AAGAGCTTCCCTCCCTCTGG 60.620 60.000 0.00 0.00 41.74 3.86
1969 2154 8.882557 AGAGTAGTAGTTTTTCTTAGGCTACT 57.117 34.615 0.00 0.00 43.07 2.57
1970 2155 8.741841 AGAGTAGTAGTTTTTCTTAGGCTACTG 58.258 37.037 11.41 0.00 41.40 2.74
1971 2156 7.321908 AGTAGTAGTTTTTCTTAGGCTACTGC 58.678 38.462 11.41 10.23 41.40 4.40
2002 2189 4.933400 ACTAGGTTGTTGCTATTGGTTACG 59.067 41.667 0.00 0.00 0.00 3.18
2117 2304 4.035017 GCATGTGTTGCGTAATCATAACC 58.965 43.478 0.00 0.00 42.54 2.85
2118 2305 4.597079 CATGTGTTGCGTAATCATAACCC 58.403 43.478 6.58 0.00 0.00 4.11
2119 2306 3.676093 TGTGTTGCGTAATCATAACCCA 58.324 40.909 0.00 0.00 0.00 4.51
2120 2307 3.687212 TGTGTTGCGTAATCATAACCCAG 59.313 43.478 0.00 0.00 0.00 4.45
2121 2308 3.064820 GTGTTGCGTAATCATAACCCAGG 59.935 47.826 0.00 0.00 0.00 4.45
2122 2309 2.616842 GTTGCGTAATCATAACCCAGGG 59.383 50.000 2.85 2.85 0.00 4.45
2123 2310 2.120312 TGCGTAATCATAACCCAGGGA 58.880 47.619 14.54 0.00 0.00 4.20
2124 2311 2.506231 TGCGTAATCATAACCCAGGGAA 59.494 45.455 14.54 0.00 0.00 3.97
2125 2312 3.054287 TGCGTAATCATAACCCAGGGAAA 60.054 43.478 14.54 0.00 0.00 3.13
2126 2313 4.142038 GCGTAATCATAACCCAGGGAAAT 58.858 43.478 14.54 1.42 0.00 2.17
2127 2314 4.023193 GCGTAATCATAACCCAGGGAAATG 60.023 45.833 14.54 14.97 0.00 2.32
2128 2315 5.373222 CGTAATCATAACCCAGGGAAATGA 58.627 41.667 22.31 22.31 34.17 2.57
2129 2316 6.003950 CGTAATCATAACCCAGGGAAATGAT 58.996 40.000 24.01 24.01 38.59 2.45
2130 2317 6.490040 CGTAATCATAACCCAGGGAAATGATT 59.510 38.462 32.90 32.90 43.27 2.57
2131 2318 6.736110 AATCATAACCCAGGGAAATGATTG 57.264 37.500 31.60 15.01 41.49 2.67
2132 2319 5.205517 TCATAACCCAGGGAAATGATTGT 57.794 39.130 14.54 0.00 0.00 2.71
2133 2320 5.588845 TCATAACCCAGGGAAATGATTGTT 58.411 37.500 14.54 0.00 0.00 2.83
2134 2321 6.736581 TCATAACCCAGGGAAATGATTGTTA 58.263 36.000 14.54 0.00 0.00 2.41
2135 2322 7.361438 TCATAACCCAGGGAAATGATTGTTAT 58.639 34.615 14.54 0.00 0.00 1.89
2136 2323 8.506921 TCATAACCCAGGGAAATGATTGTTATA 58.493 33.333 14.54 0.00 0.00 0.98
2137 2324 9.312904 CATAACCCAGGGAAATGATTGTTATAT 57.687 33.333 14.54 0.00 0.00 0.86
2138 2325 7.839680 AACCCAGGGAAATGATTGTTATATC 57.160 36.000 14.54 0.00 0.00 1.63
2139 2326 6.921412 ACCCAGGGAAATGATTGTTATATCA 58.079 36.000 14.54 0.00 38.78 2.15
2140 2327 7.006509 ACCCAGGGAAATGATTGTTATATCAG 58.993 38.462 14.54 0.00 37.91 2.90
2141 2328 7.006509 CCCAGGGAAATGATTGTTATATCAGT 58.993 38.462 0.00 0.00 37.91 3.41
2142 2329 7.506938 CCCAGGGAAATGATTGTTATATCAGTT 59.493 37.037 0.00 0.00 43.25 3.16
2199 2412 7.843490 TTCTTGATAATTTCCTCTTGGTACG 57.157 36.000 0.00 0.00 34.23 3.67
2205 2418 2.529780 TTCCTCTTGGTACGCGAAAA 57.470 45.000 15.93 0.00 34.23 2.29
2266 2492 2.165030 AGCTTGTACAATGCAAGATGCC 59.835 45.455 23.12 4.24 44.23 4.40
2268 2494 3.733077 GCTTGTACAATGCAAGATGCCTC 60.733 47.826 18.96 0.00 44.23 4.70
2296 2527 7.991460 AGAGATGCTTGTGAAAATGATCTGATA 59.009 33.333 0.00 0.00 0.00 2.15
2311 2542 6.455647 TGATCTGATATTACTTAAGCACCCG 58.544 40.000 1.29 0.00 0.00 5.28
2347 2578 1.822613 CGGACGCTAGGCACCTCTA 60.823 63.158 0.00 0.00 0.00 2.43
2355 2586 6.072397 GGACGCTAGGCACCTCTATATATATG 60.072 46.154 5.44 0.00 0.00 1.78
2375 2606 4.454728 TGGAAAGCAATGGTGATTAAGC 57.545 40.909 0.00 0.00 30.32 3.09
2383 2614 4.754114 GCAATGGTGATTAAGCAAAAACCA 59.246 37.500 3.57 3.57 40.34 3.67
2447 2678 4.260172 GGAACGGTTTGTGCAATTCTTTTG 60.260 41.667 0.00 0.00 0.00 2.44
2448 2679 2.607180 ACGGTTTGTGCAATTCTTTTGC 59.393 40.909 3.44 3.44 45.11 3.68
2498 2729 4.580167 TGTTGGGATTTGTTTGAGTGAGAG 59.420 41.667 0.00 0.00 0.00 3.20
2540 2771 0.317160 GTTTTGCCGAGGAAAAGGGG 59.683 55.000 4.13 0.00 0.00 4.79
2595 2826 2.107950 TGGAAGTGCTTATGGAACCG 57.892 50.000 0.00 0.00 0.00 4.44
2804 3036 1.422161 AAACTGGGAGGCTGTGCTCT 61.422 55.000 0.00 0.00 0.00 4.09
2805 3037 1.835927 AACTGGGAGGCTGTGCTCTC 61.836 60.000 0.00 0.00 0.00 3.20
2814 3046 1.012841 GCTGTGCTCTCCTGTTATGC 58.987 55.000 0.00 0.00 0.00 3.14
2821 3053 5.355071 TGTGCTCTCCTGTTATGCATAAAAG 59.645 40.000 24.44 24.44 36.04 2.27
2837 3069 6.728200 GCATAAAAGTCTGCTATGCAATGTA 58.272 36.000 16.33 0.00 44.73 2.29
3180 3448 9.998106 AGTAACTGTGCTAACATATATAAAGGG 57.002 33.333 0.00 0.00 35.22 3.95
3185 3453 9.155975 CTGTGCTAACATATATAAAGGGACATC 57.844 37.037 0.00 0.00 35.22 3.06
3246 3514 8.494347 CATTCACATCTCTAGCTTTAAGCATAC 58.506 37.037 19.63 0.00 45.56 2.39
3521 3793 4.410555 ACCCCTAGCTTCAAAAGAGGATAG 59.589 45.833 0.00 0.00 0.00 2.08
3538 3810 8.497910 AGAGGATAGGAATTCAGTGCTTTATA 57.502 34.615 7.93 0.00 0.00 0.98
3539 3811 8.371699 AGAGGATAGGAATTCAGTGCTTTATAC 58.628 37.037 7.93 0.00 0.00 1.47
3540 3812 8.268878 AGGATAGGAATTCAGTGCTTTATACT 57.731 34.615 7.93 0.00 0.00 2.12
3541 3813 8.371699 AGGATAGGAATTCAGTGCTTTATACTC 58.628 37.037 7.93 0.00 0.00 2.59
3542 3814 7.604545 GGATAGGAATTCAGTGCTTTATACTCC 59.395 40.741 7.93 0.00 0.00 3.85
3543 3815 5.685728 AGGAATTCAGTGCTTTATACTCCC 58.314 41.667 7.93 0.00 0.00 4.30
3544 3816 5.430089 AGGAATTCAGTGCTTTATACTCCCT 59.570 40.000 7.93 0.00 0.00 4.20
3546 3818 6.261158 GGAATTCAGTGCTTTATACTCCCTTC 59.739 42.308 7.93 0.00 0.00 3.46
3547 3819 4.386867 TCAGTGCTTTATACTCCCTTCG 57.613 45.455 0.00 0.00 0.00 3.79
3548 3820 3.767673 TCAGTGCTTTATACTCCCTTCGT 59.232 43.478 0.00 0.00 0.00 3.85
3549 3821 4.222145 TCAGTGCTTTATACTCCCTTCGTT 59.778 41.667 0.00 0.00 0.00 3.85
3551 3823 5.063564 CAGTGCTTTATACTCCCTTCGTTTC 59.936 44.000 0.00 0.00 0.00 2.78
3552 3824 5.046520 AGTGCTTTATACTCCCTTCGTTTCT 60.047 40.000 0.00 0.00 0.00 2.52
3553 3825 6.154021 AGTGCTTTATACTCCCTTCGTTTCTA 59.846 38.462 0.00 0.00 0.00 2.10
3554 3826 6.815142 GTGCTTTATACTCCCTTCGTTTCTAA 59.185 38.462 0.00 0.00 0.00 2.10
3555 3827 7.332678 GTGCTTTATACTCCCTTCGTTTCTAAA 59.667 37.037 0.00 0.00 0.00 1.85
3556 3828 8.044908 TGCTTTATACTCCCTTCGTTTCTAAAT 58.955 33.333 0.00 0.00 0.00 1.40
3557 3829 9.538508 GCTTTATACTCCCTTCGTTTCTAAATA 57.461 33.333 0.00 0.00 0.00 1.40
3564 3836 8.979534 ACTCCCTTCGTTTCTAAATATAAGTCT 58.020 33.333 0.00 0.00 0.00 3.24
3565 3837 9.819267 CTCCCTTCGTTTCTAAATATAAGTCTT 57.181 33.333 0.00 0.00 0.00 3.01
3585 3857 8.830915 AGTCTTTGAAGAGATTCTACTATGGA 57.169 34.615 0.00 0.00 35.32 3.41
3586 3858 8.691797 AGTCTTTGAAGAGATTCTACTATGGAC 58.308 37.037 0.00 0.00 35.32 4.02
3587 3859 7.923878 GTCTTTGAAGAGATTCTACTATGGACC 59.076 40.741 0.00 0.00 35.32 4.46
3588 3860 7.619698 TCTTTGAAGAGATTCTACTATGGACCA 59.380 37.037 0.00 0.00 0.00 4.02
3589 3861 6.716934 TGAAGAGATTCTACTATGGACCAC 57.283 41.667 0.00 0.00 0.00 4.16
3590 3862 6.194967 TGAAGAGATTCTACTATGGACCACA 58.805 40.000 0.00 0.00 0.00 4.17
3591 3863 6.841229 TGAAGAGATTCTACTATGGACCACAT 59.159 38.462 0.00 0.00 43.68 3.21
3592 3864 8.004801 TGAAGAGATTCTACTATGGACCACATA 58.995 37.037 0.00 0.00 41.03 2.29
3593 3865 7.768807 AGAGATTCTACTATGGACCACATAC 57.231 40.000 0.00 0.00 41.03 2.39
3594 3866 6.431543 AGAGATTCTACTATGGACCACATACG 59.568 42.308 0.00 0.00 41.03 3.06
3595 3867 5.477291 AGATTCTACTATGGACCACATACGG 59.523 44.000 0.00 0.00 41.03 4.02
3596 3868 4.442401 TCTACTATGGACCACATACGGA 57.558 45.455 0.00 0.00 41.03 4.69
3597 3869 4.395625 TCTACTATGGACCACATACGGAG 58.604 47.826 0.00 0.00 41.03 4.63
3598 3870 1.687123 ACTATGGACCACATACGGAGC 59.313 52.381 0.00 0.00 41.03 4.70
3599 3871 1.686587 CTATGGACCACATACGGAGCA 59.313 52.381 0.00 0.00 41.03 4.26
3600 3872 0.908910 ATGGACCACATACGGAGCAA 59.091 50.000 0.00 0.00 38.26 3.91
3601 3873 0.687920 TGGACCACATACGGAGCAAA 59.312 50.000 0.00 0.00 0.00 3.68
3602 3874 1.072489 TGGACCACATACGGAGCAAAA 59.928 47.619 0.00 0.00 0.00 2.44
3603 3875 2.290641 TGGACCACATACGGAGCAAAAT 60.291 45.455 0.00 0.00 0.00 1.82
3604 3876 2.097466 GGACCACATACGGAGCAAAATG 59.903 50.000 0.00 0.00 0.00 2.32
3605 3877 3.006940 GACCACATACGGAGCAAAATGA 58.993 45.455 0.00 0.00 0.00 2.57
3606 3878 3.009723 ACCACATACGGAGCAAAATGAG 58.990 45.455 0.00 0.00 0.00 2.90
3607 3879 3.009723 CCACATACGGAGCAAAATGAGT 58.990 45.455 0.00 0.00 0.00 3.41
3608 3880 3.181507 CCACATACGGAGCAAAATGAGTG 60.182 47.826 0.00 0.00 0.00 3.51
3609 3881 3.684305 CACATACGGAGCAAAATGAGTGA 59.316 43.478 0.00 0.00 0.00 3.41
3610 3882 4.154015 CACATACGGAGCAAAATGAGTGAA 59.846 41.667 0.00 0.00 0.00 3.18
3611 3883 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
3612 3884 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
3613 3885 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
3614 3886 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
3615 3887 5.431765 ACGGAGCAAAATGAGTGAATCTAT 58.568 37.500 0.00 0.00 0.00 1.98
3616 3888 6.582636 ACGGAGCAAAATGAGTGAATCTATA 58.417 36.000 0.00 0.00 0.00 1.31
3617 3889 6.480320 ACGGAGCAAAATGAGTGAATCTATAC 59.520 38.462 0.00 0.00 0.00 1.47
3618 3890 6.703607 CGGAGCAAAATGAGTGAATCTATACT 59.296 38.462 0.00 0.00 0.00 2.12
3619 3891 7.095857 CGGAGCAAAATGAGTGAATCTATACTC 60.096 40.741 0.00 0.00 42.77 2.59
3620 3892 7.930865 GGAGCAAAATGAGTGAATCTATACTCT 59.069 37.037 0.00 0.00 42.86 3.24
3621 3893 9.973450 GAGCAAAATGAGTGAATCTATACTCTA 57.027 33.333 0.00 0.00 42.86 2.43
3641 3913 8.845413 ACTCTAAAATGCATCTAGATTCATCC 57.155 34.615 16.73 0.00 0.00 3.51
3642 3914 8.435187 ACTCTAAAATGCATCTAGATTCATCCA 58.565 33.333 16.73 6.01 0.00 3.41
3643 3915 9.451002 CTCTAAAATGCATCTAGATTCATCCAT 57.549 33.333 16.73 9.54 0.00 3.41
3647 3919 9.529823 AAAATGCATCTAGATTCATCCATATGT 57.470 29.630 16.73 0.00 34.50 2.29
3648 3920 8.507524 AATGCATCTAGATTCATCCATATGTG 57.492 34.615 16.73 0.00 34.50 3.21
3650 3922 6.013119 TGCATCTAGATTCATCCATATGTGGT 60.013 38.462 8.51 0.00 46.16 4.16
3651 3923 6.538021 GCATCTAGATTCATCCATATGTGGTC 59.462 42.308 8.51 0.00 46.16 4.02
3652 3924 7.618137 CATCTAGATTCATCCATATGTGGTCA 58.382 38.462 8.51 0.00 46.16 4.02
3653 3925 7.803487 TCTAGATTCATCCATATGTGGTCAT 57.197 36.000 8.51 0.00 46.16 3.06
3654 3926 8.899887 TCTAGATTCATCCATATGTGGTCATA 57.100 34.615 8.51 0.00 46.16 2.15
3655 3927 9.325248 TCTAGATTCATCCATATGTGGTCATAA 57.675 33.333 8.51 0.32 46.16 1.90
3657 3929 8.803397 AGATTCATCCATATGTGGTCATAATG 57.197 34.615 8.51 4.74 46.16 1.90
3658 3930 8.608598 AGATTCATCCATATGTGGTCATAATGA 58.391 33.333 8.51 7.01 46.16 2.57
3659 3931 9.234827 GATTCATCCATATGTGGTCATAATGAA 57.765 33.333 18.58 18.58 46.16 2.57
3660 3932 8.993404 TTCATCCATATGTGGTCATAATGAAA 57.007 30.769 15.70 4.90 46.16 2.69
3661 3933 9.590828 TTCATCCATATGTGGTCATAATGAAAT 57.409 29.630 15.70 0.00 46.16 2.17
3662 3934 9.234827 TCATCCATATGTGGTCATAATGAAATC 57.765 33.333 8.51 0.00 46.16 2.17
3663 3935 9.239551 CATCCATATGTGGTCATAATGAAATCT 57.760 33.333 8.51 0.00 46.16 2.40
3664 3936 8.853077 TCCATATGTGGTCATAATGAAATCTC 57.147 34.615 8.51 0.00 46.16 2.75
3665 3937 8.663167 TCCATATGTGGTCATAATGAAATCTCT 58.337 33.333 8.51 0.00 46.16 3.10
3666 3938 9.948964 CCATATGTGGTCATAATGAAATCTCTA 57.051 33.333 0.00 0.00 40.83 2.43
3670 3942 9.685276 ATGTGGTCATAATGAAATCTCTACAAA 57.315 29.630 0.00 0.00 31.89 2.83
3671 3943 9.166173 TGTGGTCATAATGAAATCTCTACAAAG 57.834 33.333 0.00 0.00 0.00 2.77
3672 3944 9.383519 GTGGTCATAATGAAATCTCTACAAAGA 57.616 33.333 0.00 0.00 0.00 2.52
3673 3945 9.383519 TGGTCATAATGAAATCTCTACAAAGAC 57.616 33.333 0.00 0.00 0.00 3.01
3674 3946 9.606631 GGTCATAATGAAATCTCTACAAAGACT 57.393 33.333 0.00 0.00 0.00 3.24
3692 3964 9.853177 ACAAAGACTTATATTTAGGAATGGAGG 57.147 33.333 0.00 0.00 0.00 4.30
3693 3965 9.289782 CAAAGACTTATATTTAGGAATGGAGGG 57.710 37.037 0.00 0.00 0.00 4.30
3694 3966 8.814448 AAGACTTATATTTAGGAATGGAGGGA 57.186 34.615 0.00 0.00 0.00 4.20
3695 3967 8.442660 AGACTTATATTTAGGAATGGAGGGAG 57.557 38.462 0.00 0.00 0.00 4.30
3696 3968 8.019652 AGACTTATATTTAGGAATGGAGGGAGT 58.980 37.037 0.00 0.00 0.00 3.85
3753 4025 7.918536 ATCCTCATTTCTATGCATGTGATAC 57.081 36.000 10.16 0.00 0.00 2.24
3816 4088 6.420903 CGAGTTTATCAGTTCTGAACAAGTGA 59.579 38.462 21.50 16.21 39.51 3.41
3907 4179 6.817184 TGCAGGTTATTCCTCTTATGTACTC 58.183 40.000 0.00 0.00 46.24 2.59
3908 4180 6.183360 TGCAGGTTATTCCTCTTATGTACTCC 60.183 42.308 0.00 0.00 46.24 3.85
3927 4199 6.865651 ACTCCCTCCTTCCCAAAATATAAT 57.134 37.500 0.00 0.00 0.00 1.28
3932 4204 3.572255 TCCTTCCCAAAATATAATGCGCC 59.428 43.478 4.18 0.00 0.00 6.53
4135 4407 2.783135 AGACCGTGCAAAGTCAATCAT 58.217 42.857 17.12 0.00 35.38 2.45
4270 4546 0.524862 ACTAATCGCCAAGTCGTCGT 59.475 50.000 0.00 0.00 0.00 4.34
4273 4549 2.149803 AATCGCCAAGTCGTCGTGGA 62.150 55.000 17.66 0.00 44.02 4.02
4310 4586 1.882989 GCGACTTGACTCAGGGAGCT 61.883 60.000 0.00 0.00 32.04 4.09
4726 5014 0.318699 GGCGACTCAAAAACCTTGCC 60.319 55.000 0.00 0.00 0.00 4.52
4727 5015 0.318699 GCGACTCAAAAACCTTGCCC 60.319 55.000 0.00 0.00 0.00 5.36
4728 5016 0.313987 CGACTCAAAAACCTTGCCCC 59.686 55.000 0.00 0.00 0.00 5.80
4729 5017 1.704641 GACTCAAAAACCTTGCCCCT 58.295 50.000 0.00 0.00 0.00 4.79
4730 5018 1.341209 GACTCAAAAACCTTGCCCCTG 59.659 52.381 0.00 0.00 0.00 4.45
4731 5019 1.063266 ACTCAAAAACCTTGCCCCTGA 60.063 47.619 0.00 0.00 0.00 3.86
4732 5020 2.250924 CTCAAAAACCTTGCCCCTGAT 58.749 47.619 0.00 0.00 0.00 2.90
4733 5021 2.232208 CTCAAAAACCTTGCCCCTGATC 59.768 50.000 0.00 0.00 0.00 2.92
5079 5445 7.033185 GTGACCCCACATACATTTACATTTTC 58.967 38.462 0.00 0.00 42.72 2.29
5083 5449 8.655901 ACCCCACATACATTTACATTTTCTTTT 58.344 29.630 0.00 0.00 0.00 2.27
5219 5589 5.245531 CACCTAATTTCTTGGAGCACACTA 58.754 41.667 0.00 0.00 0.00 2.74
5220 5590 5.705441 CACCTAATTTCTTGGAGCACACTAA 59.295 40.000 0.00 0.00 0.00 2.24
5271 5675 8.492415 AATAGTGAAGTATATACCTGCCTTGA 57.508 34.615 9.32 0.00 0.00 3.02
5326 5730 4.455877 AGCCTGGAACTGTATTCTTTTTCG 59.544 41.667 0.00 0.00 0.00 3.46
5330 5734 7.593825 CCTGGAACTGTATTCTTTTTCGAAAT 58.406 34.615 12.12 0.00 0.00 2.17
5331 5735 7.538678 CCTGGAACTGTATTCTTTTTCGAAATG 59.461 37.037 12.12 8.14 0.00 2.32
5431 5835 4.923281 GTCCTCCAATTTAACATTGCACAC 59.077 41.667 0.00 0.00 0.00 3.82
5626 6030 3.770933 CCCATCCTGGATTTGTGTGATTT 59.229 43.478 6.42 0.00 40.96 2.17
5631 6035 7.012704 CCATCCTGGATTTGTGTGATTTACTAG 59.987 40.741 6.42 0.00 40.96 2.57
5841 6245 1.693062 TGGTTTTGATTGTGCAGGCAT 59.307 42.857 0.00 0.00 0.00 4.40
5860 6264 5.207305 GCATTATGCCAATTGTTTCACAC 57.793 39.130 5.80 0.00 37.42 3.82
5943 6351 7.278875 AGGTGAGGAATGATCTCTATTGTTTC 58.721 38.462 0.00 0.00 32.78 2.78
6014 6439 8.892723 TGTATGTCAGGCAAATTATCAAACTAG 58.107 33.333 0.00 0.00 0.00 2.57
6027 6452 3.879998 TCAAACTAGTGGCTTGTGTGAA 58.120 40.909 0.00 0.00 32.38 3.18
6031 6456 6.714810 TCAAACTAGTGGCTTGTGTGAATTAT 59.285 34.615 0.00 0.00 32.38 1.28
6032 6457 7.880713 TCAAACTAGTGGCTTGTGTGAATTATA 59.119 33.333 0.00 0.00 32.38 0.98
6034 6459 8.807948 AACTAGTGGCTTGTGTGAATTATAAT 57.192 30.769 0.00 0.00 0.00 1.28
6036 6461 9.243105 ACTAGTGGCTTGTGTGAATTATAATTT 57.757 29.630 11.92 0.00 0.00 1.82
6134 6559 7.109501 GGGTTTTATGGCAATTACCTGAATTT 58.890 34.615 0.00 0.00 35.45 1.82
6141 6566 4.142838 GGCAATTACCTGAATTTTTGCAGC 60.143 41.667 7.62 0.00 35.45 5.25
6166 6591 9.382275 GCCATGTAGGAAATTAATTGTTTGAAT 57.618 29.630 0.39 0.00 41.22 2.57
6465 7326 7.867403 CAGTACATGTTAAACAAGAGGCAAATT 59.133 33.333 2.30 0.00 0.00 1.82
6628 7489 5.435686 TGTGGAAGCTTACTATCCATGTT 57.564 39.130 10.74 0.00 44.55 2.71
6630 7491 4.508124 GTGGAAGCTTACTATCCATGTTCG 59.492 45.833 10.74 0.00 44.55 3.95
6654 7515 3.895232 ACTATGAGTTGGTTGCGAGAT 57.105 42.857 0.00 0.00 0.00 2.75
6897 7761 8.796475 ACTATTCAGCAACACAAAATTGACTAT 58.204 29.630 0.00 0.00 0.00 2.12
6988 7852 4.638304 TCTCTTTTTCCTTGTAGGGAACG 58.362 43.478 0.00 0.00 44.05 3.95
7066 7930 3.416119 TCGTAGTCCTGCACTTAATCG 57.584 47.619 0.00 0.00 36.43 3.34
7330 8201 1.000955 AGCGTGAGTTTCGTCCAGAAT 59.999 47.619 0.00 0.00 38.86 2.40
7369 8268 8.072321 TCTTTATCCTGATCATATGCTAGTCC 57.928 38.462 0.00 0.00 0.00 3.85
7376 8275 6.718454 CCTGATCATATGCTAGTCCCAAAATT 59.282 38.462 0.00 0.00 0.00 1.82
7382 8281 3.343617 TGCTAGTCCCAAAATTCCTTCG 58.656 45.455 0.00 0.00 0.00 3.79
7390 8289 5.066117 GTCCCAAAATTCCTTCGTAGAATCC 59.934 44.000 0.00 0.00 45.90 3.01
7393 8292 2.528041 ATTCCTTCGTAGAATCCGCC 57.472 50.000 0.00 0.00 45.90 6.13
7398 8297 2.035449 CCTTCGTAGAATCCGCCACATA 59.965 50.000 0.00 0.00 45.90 2.29
7463 8363 7.562088 TCCCAAATTGTATATTTTGTACTCCCC 59.438 37.037 0.00 0.00 32.23 4.81
7465 8365 7.422399 CAAATTGTATATTTTGTACTCCCCCG 58.578 38.462 0.00 0.00 0.00 5.73
7466 8366 5.697082 TTGTATATTTTGTACTCCCCCGT 57.303 39.130 0.00 0.00 0.00 5.28
7467 8367 6.805016 TTGTATATTTTGTACTCCCCCGTA 57.195 37.500 0.00 0.00 0.00 4.02
7468 8368 6.160576 TGTATATTTTGTACTCCCCCGTAC 57.839 41.667 0.00 0.00 40.06 3.67
7481 8383 2.486013 CCCCCGTACTATACTTTTGGGC 60.486 54.545 0.00 0.00 33.72 5.36
7482 8384 2.476821 CCCGTACTATACTTTTGGGCG 58.523 52.381 0.00 0.00 0.00 6.13
7484 8386 2.101249 CCGTACTATACTTTTGGGCGGA 59.899 50.000 0.00 0.00 39.05 5.54
7485 8387 3.378339 CGTACTATACTTTTGGGCGGAG 58.622 50.000 0.00 0.00 0.00 4.63
7488 8390 1.766496 CTATACTTTTGGGCGGAGGGA 59.234 52.381 0.00 0.00 0.00 4.20
7489 8391 0.546598 ATACTTTTGGGCGGAGGGAG 59.453 55.000 0.00 0.00 0.00 4.30
7490 8392 0.838987 TACTTTTGGGCGGAGGGAGT 60.839 55.000 0.00 0.00 0.00 3.85
7491 8393 0.838987 ACTTTTGGGCGGAGGGAGTA 60.839 55.000 0.00 0.00 0.00 2.59
7492 8394 0.392595 CTTTTGGGCGGAGGGAGTAC 60.393 60.000 0.00 0.00 0.00 2.73
7493 8395 0.838987 TTTTGGGCGGAGGGAGTACT 60.839 55.000 0.00 0.00 0.00 2.73
7494 8396 0.041535 TTTGGGCGGAGGGAGTACTA 59.958 55.000 0.00 0.00 0.00 1.82
7495 8397 0.263765 TTGGGCGGAGGGAGTACTAT 59.736 55.000 0.00 0.00 0.00 2.12
7496 8398 0.263765 TGGGCGGAGGGAGTACTATT 59.736 55.000 0.00 0.00 0.00 1.73
7497 8399 1.343681 TGGGCGGAGGGAGTACTATTT 60.344 52.381 0.00 0.00 0.00 1.40
7498 8400 1.767088 GGGCGGAGGGAGTACTATTTT 59.233 52.381 0.00 0.00 0.00 1.82
7538 8440 6.014012 GGAGGGAGTAGTTAGCTCTGATAAT 58.986 44.000 0.00 0.00 33.73 1.28
7539 8441 6.495526 GGAGGGAGTAGTTAGCTCTGATAATT 59.504 42.308 0.00 0.00 33.73 1.40
7586 8490 6.771188 TTTCAATGTGTGTTTGTCGTTTTT 57.229 29.167 0.00 0.00 0.00 1.94
7610 8514 3.148412 TGTGAGGGAATCAATGTGTGTG 58.852 45.455 0.00 0.00 40.43 3.82
7669 8574 4.996788 ATTCTGAAATGTGGCAGATTCC 57.003 40.909 10.57 0.00 40.51 3.01
7769 8697 5.050499 GTGAAATGCTATGGAGAATCACTCG 60.050 44.000 0.00 0.00 45.76 4.18
7821 8749 4.917906 AGAAGCCAGATCAGTTTAACCT 57.082 40.909 0.00 0.00 0.00 3.50
7854 8786 5.182950 TGTCGTTTTATGTCTCCATTTGCAT 59.817 36.000 0.00 0.00 32.29 3.96
7911 8843 4.217767 AGTCACTGAACTTGTAGCGTATCA 59.782 41.667 0.00 0.00 0.00 2.15
7944 8883 4.149571 GCTCTGTAGCGACATGTATCATTG 59.850 45.833 0.00 0.00 39.39 2.82
8001 8946 6.651643 TGTGTACTTATTTTATGGTGAAGCGT 59.348 34.615 0.00 0.00 0.00 5.07
8002 8947 7.818446 TGTGTACTTATTTTATGGTGAAGCGTA 59.182 33.333 0.00 0.00 0.00 4.42
8003 8948 8.823818 GTGTACTTATTTTATGGTGAAGCGTAT 58.176 33.333 0.00 0.00 0.00 3.06
8004 8949 8.822855 TGTACTTATTTTATGGTGAAGCGTATG 58.177 33.333 0.00 0.00 0.00 2.39
8005 8950 7.259290 ACTTATTTTATGGTGAAGCGTATGG 57.741 36.000 0.00 0.00 0.00 2.74
8006 8951 6.262273 ACTTATTTTATGGTGAAGCGTATGGG 59.738 38.462 0.00 0.00 0.00 4.00
8007 8952 1.961793 TTATGGTGAAGCGTATGGGC 58.038 50.000 0.00 0.00 0.00 5.36
8008 8953 0.249699 TATGGTGAAGCGTATGGGCG 60.250 55.000 0.00 0.00 38.18 6.13
8016 8961 2.510691 CGTATGGGCGCCGTTCTT 60.511 61.111 22.54 7.59 0.00 2.52
8017 8962 2.104253 CGTATGGGCGCCGTTCTTT 61.104 57.895 22.54 3.43 0.00 2.52
8018 8963 1.427819 GTATGGGCGCCGTTCTTTG 59.572 57.895 22.54 0.00 0.00 2.77
8019 8964 2.403378 TATGGGCGCCGTTCTTTGC 61.403 57.895 22.54 3.93 0.00 3.68
8020 8965 2.813226 TATGGGCGCCGTTCTTTGCT 62.813 55.000 22.54 0.00 0.00 3.91
8021 8966 4.404654 GGGCGCCGTTCTTTGCTG 62.405 66.667 22.54 0.00 0.00 4.41
8023 8968 4.030452 GCGCCGTTCTTTGCTGCT 62.030 61.111 0.00 0.00 0.00 4.24
8024 8969 2.127118 CGCCGTTCTTTGCTGCTG 60.127 61.111 0.00 0.00 0.00 4.41
8025 8970 2.606961 CGCCGTTCTTTGCTGCTGA 61.607 57.895 0.00 0.00 0.00 4.26
8026 8971 1.878775 GCCGTTCTTTGCTGCTGAT 59.121 52.632 0.00 0.00 0.00 2.90
8027 8972 0.455633 GCCGTTCTTTGCTGCTGATG 60.456 55.000 0.00 0.00 0.00 3.07
8028 8973 1.159285 CCGTTCTTTGCTGCTGATGA 58.841 50.000 0.00 0.00 0.00 2.92
8029 8974 1.536766 CCGTTCTTTGCTGCTGATGAA 59.463 47.619 0.00 1.48 0.00 2.57
8048 9050 8.039603 TGATGAATAAGCGTGTTAGTGAATTT 57.960 30.769 0.00 0.00 0.00 1.82
8053 9055 4.503741 AGCGTGTTAGTGAATTTGCAAT 57.496 36.364 0.00 0.00 0.00 3.56
8055 9057 4.917415 AGCGTGTTAGTGAATTTGCAATTC 59.083 37.500 0.00 7.27 0.00 2.17
8057 9059 4.201391 CGTGTTAGTGAATTTGCAATTCGC 60.201 41.667 19.05 19.05 42.89 4.70
8061 9063 4.445452 AGTGAATTTGCAATTCGCTGAT 57.555 36.364 24.26 10.69 44.36 2.90
8173 9178 1.733041 CCAGCTACACCACGACACG 60.733 63.158 0.00 0.00 0.00 4.49
8348 9361 1.338200 ACAGGTGCAGATCTTCGGTTC 60.338 52.381 0.00 0.00 0.00 3.62
8396 9409 2.229302 GTGGCGAGAGTGAGTAGAAGTT 59.771 50.000 0.00 0.00 0.00 2.66
8397 9410 2.891580 TGGCGAGAGTGAGTAGAAGTTT 59.108 45.455 0.00 0.00 0.00 2.66
8398 9411 3.321111 TGGCGAGAGTGAGTAGAAGTTTT 59.679 43.478 0.00 0.00 0.00 2.43
8399 9412 4.202223 TGGCGAGAGTGAGTAGAAGTTTTT 60.202 41.667 0.00 0.00 0.00 1.94
8435 9448 5.938125 TCTCGCTAAGCTTTTATTCAACCTT 59.062 36.000 3.20 0.00 0.00 3.50
8451 9464 8.650143 ATTCAACCTTCATAATGTTTACAGGT 57.350 30.769 0.00 0.00 0.00 4.00
8452 9465 9.747898 ATTCAACCTTCATAATGTTTACAGGTA 57.252 29.630 0.00 0.00 0.00 3.08
8453 9466 9.575868 TTCAACCTTCATAATGTTTACAGGTAA 57.424 29.630 0.00 0.00 0.00 2.85
8454 9467 9.575868 TCAACCTTCATAATGTTTACAGGTAAA 57.424 29.630 0.65 0.65 33.10 2.01
8468 9481 9.188588 GTTTACAGGTAAAAATTAAAGCTGTCC 57.811 33.333 17.56 8.15 45.99 4.02
8512 9525 3.497262 GTGACCAAACCCGAGAGTTAAAG 59.503 47.826 0.00 0.00 0.00 1.85
8521 9534 4.224370 ACCCGAGAGTTAAAGAATGCCTAA 59.776 41.667 0.00 0.00 0.00 2.69
8533 9546 4.437239 AGAATGCCTAACGAGATTGTGAG 58.563 43.478 0.00 0.00 0.00 3.51
8586 9599 7.120579 TGAACGATATTACAATCAGCAAAACCT 59.879 33.333 0.00 0.00 0.00 3.50
8594 9607 5.316167 ACAATCAGCAAAACCTGTAGATCA 58.684 37.500 0.00 0.00 34.47 2.92
8595 9608 5.769662 ACAATCAGCAAAACCTGTAGATCAA 59.230 36.000 0.00 0.00 34.47 2.57
8615 9628 6.201226 TCAATCTATGATCACGATAGCTCC 57.799 41.667 0.00 0.00 33.40 4.70
8622 9639 5.378292 TGATCACGATAGCTCCATACTTC 57.622 43.478 0.00 0.00 42.67 3.01
8626 9643 1.729472 CGATAGCTCCATACTTCGCCG 60.729 57.143 0.00 0.00 0.00 6.46
8629 9646 2.658593 CTCCATACTTCGCCGCGG 60.659 66.667 24.05 24.05 0.00 6.46
8646 9663 1.913403 GCGGAATTTTGCTTGATGTCG 59.087 47.619 0.00 0.00 0.00 4.35
8661 9678 0.528901 TGTCGTTCACCACCGTCTTG 60.529 55.000 0.00 0.00 0.00 3.02
8691 9708 3.029320 GCAATGTGAATTTGCTGGACA 57.971 42.857 1.36 0.00 44.71 4.02
8692 9709 3.592059 GCAATGTGAATTTGCTGGACAT 58.408 40.909 1.36 0.00 44.71 3.06
8693 9710 4.746729 GCAATGTGAATTTGCTGGACATA 58.253 39.130 1.36 0.00 44.71 2.29
8694 9711 4.563976 GCAATGTGAATTTGCTGGACATAC 59.436 41.667 1.36 0.00 44.71 2.39
8695 9712 5.712004 CAATGTGAATTTGCTGGACATACA 58.288 37.500 0.00 0.00 0.00 2.29
8696 9713 5.571784 ATGTGAATTTGCTGGACATACAG 57.428 39.130 0.00 0.00 41.41 2.74
8697 9714 3.758023 TGTGAATTTGCTGGACATACAGG 59.242 43.478 0.00 0.00 38.90 4.00
8698 9715 3.758554 GTGAATTTGCTGGACATACAGGT 59.241 43.478 0.00 0.00 38.90 4.00
8699 9716 4.009675 TGAATTTGCTGGACATACAGGTC 58.990 43.478 0.00 0.00 38.90 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
168 173 2.432628 GTTGAGGCGTCGGGTCAG 60.433 66.667 1.39 0.00 0.00 3.51
169 174 3.998672 GGTTGAGGCGTCGGGTCA 61.999 66.667 1.39 0.00 0.00 4.02
296 305 0.811281 CCTCCAATTCGGGTGCTTTC 59.189 55.000 0.00 0.00 34.36 2.62
444 553 3.864983 AAGGAAGGGTGGCGGAGGA 62.865 63.158 0.00 0.00 0.00 3.71
482 596 1.378514 CGGGTGTGGGAGGGAATTG 60.379 63.158 0.00 0.00 0.00 2.32
488 602 4.065281 GACGACGGGTGTGGGAGG 62.065 72.222 0.00 0.00 0.00 4.30
590 706 9.161684 GCCGGTCGTTGTTTTATATTATTTTAG 57.838 33.333 1.90 0.00 0.00 1.85
765 885 2.826738 GGAGAGGTCTCGCTCGCT 60.827 66.667 0.90 0.00 43.76 4.93
900 1028 4.830731 CACAAACGAACAAACAAACAAACG 59.169 37.500 0.00 0.00 0.00 3.60
916 1044 3.584250 CTGCTCAGCCGCACAAACG 62.584 63.158 0.00 0.00 35.74 3.60
920 1048 4.383861 CTCCTGCTCAGCCGCACA 62.384 66.667 0.00 0.00 35.74 4.57
968 1096 2.182030 CCTGAACCGCTCTCGACC 59.818 66.667 0.00 0.00 38.10 4.79
970 1098 2.989253 TGCCTGAACCGCTCTCGA 60.989 61.111 0.00 0.00 38.10 4.04
971 1099 2.507992 CTGCCTGAACCGCTCTCG 60.508 66.667 0.00 0.00 0.00 4.04
973 1101 3.710722 CCCTGCCTGAACCGCTCT 61.711 66.667 0.00 0.00 0.00 4.09
1212 1345 0.325671 GGGAGATGGAGGTGACAGGA 60.326 60.000 0.00 0.00 0.00 3.86
1216 1349 1.691434 GAGATGGGAGATGGAGGTGAC 59.309 57.143 0.00 0.00 0.00 3.67
1222 1355 1.833630 GTGTGTGAGATGGGAGATGGA 59.166 52.381 0.00 0.00 0.00 3.41
1288 1421 3.623960 CGAGAAGAACGGACAGATCTAGT 59.376 47.826 0.00 0.00 31.28 2.57
1289 1422 3.623960 ACGAGAAGAACGGACAGATCTAG 59.376 47.826 0.00 0.00 31.28 2.43
1334 1472 2.584418 CAGTGCAGCGAGGATCCG 60.584 66.667 5.98 0.00 0.00 4.18
1377 1526 3.262448 TTTGGACGGGCTGGTAGGC 62.262 63.158 0.00 0.00 40.51 3.93
1389 1538 1.818674 AGGAAATCATGGCGTTTGGAC 59.181 47.619 0.00 0.00 0.00 4.02
1390 1539 2.091541 GAGGAAATCATGGCGTTTGGA 58.908 47.619 0.00 0.00 0.00 3.53
1394 1543 1.408822 GGAGGAGGAAATCATGGCGTT 60.409 52.381 0.00 0.00 0.00 4.84
1395 1544 0.181350 GGAGGAGGAAATCATGGCGT 59.819 55.000 0.00 0.00 0.00 5.68
1434 1591 4.389992 GCACCATGTGATGATATCCTAACG 59.610 45.833 0.00 0.00 35.23 3.18
1439 1596 3.119602 GCATGCACCATGTGATGATATCC 60.120 47.826 14.21 0.00 43.10 2.59
1454 1611 0.740868 TGGCTCTTCGTAGCATGCAC 60.741 55.000 21.98 14.60 44.64 4.57
1455 1612 0.740868 GTGGCTCTTCGTAGCATGCA 60.741 55.000 21.98 2.77 44.64 3.96
1456 1613 1.432270 GGTGGCTCTTCGTAGCATGC 61.432 60.000 10.51 10.51 44.64 4.06
1457 1614 0.108186 TGGTGGCTCTTCGTAGCATG 60.108 55.000 8.88 0.00 44.64 4.06
1480 1638 2.102252 GAGGATCTTCAGCCACAGGTAG 59.898 54.545 0.00 0.00 0.00 3.18
1481 1639 2.111384 GAGGATCTTCAGCCACAGGTA 58.889 52.381 0.00 0.00 0.00 3.08
1482 1640 0.908198 GAGGATCTTCAGCCACAGGT 59.092 55.000 0.00 0.00 0.00 4.00
1486 1644 2.626840 GACTTGAGGATCTTCAGCCAC 58.373 52.381 7.65 0.00 34.92 5.01
1487 1645 1.556911 GGACTTGAGGATCTTCAGCCA 59.443 52.381 7.65 0.00 34.92 4.75
1488 1646 1.836802 AGGACTTGAGGATCTTCAGCC 59.163 52.381 7.65 10.61 34.92 4.85
1489 1647 2.158971 GGAGGACTTGAGGATCTTCAGC 60.159 54.545 7.65 2.34 34.92 4.26
1490 1648 2.100584 CGGAGGACTTGAGGATCTTCAG 59.899 54.545 7.65 5.39 34.92 3.02
1503 1666 2.657237 CGCAAAGGACGGAGGACT 59.343 61.111 0.00 0.00 0.00 3.85
1505 1668 4.388499 GGCGCAAAGGACGGAGGA 62.388 66.667 10.83 0.00 0.00 3.71
1535 1698 1.134220 CCCCATTTCTCCGGAATCGAA 60.134 52.381 5.23 2.56 39.00 3.71
1576 1750 3.886505 GGAGATCGATCTGGTACTGTTCT 59.113 47.826 31.88 4.41 37.25 3.01
1578 1752 3.381908 GTGGAGATCGATCTGGTACTGTT 59.618 47.826 31.88 5.12 37.25 3.16
1829 2010 0.168788 CTTTGCACGCAGGTATGGTG 59.831 55.000 0.00 0.00 33.35 4.17
1835 2016 1.510480 GAAGCTCTTTGCACGCAGGT 61.510 55.000 0.00 0.00 45.94 4.00
1859 2044 3.007920 AGCTCAGCCCACCAGAGG 61.008 66.667 0.00 0.00 0.00 3.69
1860 2045 1.958902 GAGAGCTCAGCCCACCAGAG 61.959 65.000 17.77 0.00 0.00 3.35
1861 2046 1.986757 GAGAGCTCAGCCCACCAGA 60.987 63.158 17.77 0.00 0.00 3.86
1862 2047 2.583520 GAGAGCTCAGCCCACCAG 59.416 66.667 17.77 0.00 0.00 4.00
1863 2048 3.385384 CGAGAGCTCAGCCCACCA 61.385 66.667 17.77 0.00 0.00 4.17
1864 2049 3.386237 ACGAGAGCTCAGCCCACC 61.386 66.667 17.77 0.00 0.00 4.61
1865 2050 2.125753 CACGAGAGCTCAGCCCAC 60.126 66.667 17.77 0.00 0.00 4.61
1969 2154 4.960469 AGCAACAACCTAGTATAGTAGGCA 59.040 41.667 27.19 0.00 43.24 4.75
1970 2155 5.532664 AGCAACAACCTAGTATAGTAGGC 57.467 43.478 27.19 15.32 43.24 3.93
1971 2156 8.088981 CCAATAGCAACAACCTAGTATAGTAGG 58.911 40.741 26.09 26.09 44.77 3.18
1972 2157 8.639761 ACCAATAGCAACAACCTAGTATAGTAG 58.360 37.037 7.53 7.53 36.82 2.57
1973 2158 8.543293 ACCAATAGCAACAACCTAGTATAGTA 57.457 34.615 0.00 0.00 36.82 1.82
1974 2159 7.433537 ACCAATAGCAACAACCTAGTATAGT 57.566 36.000 0.00 0.00 36.82 2.12
1975 2160 9.257651 GTAACCAATAGCAACAACCTAGTATAG 57.742 37.037 0.00 0.00 38.80 1.31
1976 2161 7.922278 CGTAACCAATAGCAACAACCTAGTATA 59.078 37.037 0.00 0.00 0.00 1.47
1977 2162 6.759827 CGTAACCAATAGCAACAACCTAGTAT 59.240 38.462 0.00 0.00 0.00 2.12
2002 2189 1.111277 AGCGCCCAAATCCCATAAAC 58.889 50.000 2.29 0.00 0.00 2.01
2116 2303 7.006509 ACTGATATAACAATCATTTCCCTGGG 58.993 38.462 6.33 6.33 35.40 4.45
2117 2304 8.469309 AACTGATATAACAATCATTTCCCTGG 57.531 34.615 0.00 0.00 35.40 4.45
2122 2309 9.956720 CAAGGGAACTGATATAACAATCATTTC 57.043 33.333 7.87 7.87 42.68 2.17
2123 2310 9.479549 ACAAGGGAACTGATATAACAATCATTT 57.520 29.630 0.00 0.00 42.68 2.32
2124 2311 8.906867 CACAAGGGAACTGATATAACAATCATT 58.093 33.333 0.00 0.00 42.68 2.57
2125 2312 8.055181 ACACAAGGGAACTGATATAACAATCAT 58.945 33.333 0.00 0.00 42.68 2.45
2126 2313 7.402054 ACACAAGGGAACTGATATAACAATCA 58.598 34.615 0.00 0.00 42.68 2.57
2127 2314 7.865706 ACACAAGGGAACTGATATAACAATC 57.134 36.000 0.00 0.00 42.68 2.67
2128 2315 7.773690 GGTACACAAGGGAACTGATATAACAAT 59.226 37.037 0.00 0.00 42.68 2.71
2129 2316 7.107542 GGTACACAAGGGAACTGATATAACAA 58.892 38.462 0.00 0.00 42.68 2.83
2130 2317 6.628621 CGGTACACAAGGGAACTGATATAACA 60.629 42.308 0.00 0.00 42.68 2.41
2131 2318 5.751990 CGGTACACAAGGGAACTGATATAAC 59.248 44.000 0.00 0.00 42.68 1.89
2132 2319 5.163385 CCGGTACACAAGGGAACTGATATAA 60.163 44.000 0.00 0.00 42.68 0.98
2133 2320 4.342951 CCGGTACACAAGGGAACTGATATA 59.657 45.833 0.00 0.00 42.68 0.86
2134 2321 3.134081 CCGGTACACAAGGGAACTGATAT 59.866 47.826 0.00 0.00 42.68 1.63
2135 2322 2.498481 CCGGTACACAAGGGAACTGATA 59.502 50.000 0.00 0.00 42.68 2.15
2136 2323 1.278127 CCGGTACACAAGGGAACTGAT 59.722 52.381 0.00 0.00 42.68 2.90
2137 2324 0.682852 CCGGTACACAAGGGAACTGA 59.317 55.000 0.00 0.00 42.68 3.41
2138 2325 0.953960 GCCGGTACACAAGGGAACTG 60.954 60.000 1.90 0.00 42.68 3.16
2140 2327 0.953960 CTGCCGGTACACAAGGGAAC 60.954 60.000 1.90 0.00 0.00 3.62
2141 2328 1.373435 CTGCCGGTACACAAGGGAA 59.627 57.895 1.90 0.00 0.00 3.97
2142 2329 2.589157 CCTGCCGGTACACAAGGGA 61.589 63.158 1.90 0.00 0.00 4.20
2143 2330 2.046314 CCTGCCGGTACACAAGGG 60.046 66.667 1.90 0.00 0.00 3.95
2182 2395 3.872511 TCGCGTACCAAGAGGAAATTA 57.127 42.857 5.77 0.00 38.69 1.40
2226 2439 7.321153 ACAAGCTTACAGAAAGTACATACGAT 58.679 34.615 0.00 0.00 37.53 3.73
2228 2441 6.946229 ACAAGCTTACAGAAAGTACATACG 57.054 37.500 0.00 0.00 37.53 3.06
2266 2492 4.628766 TCATTTTCACAAGCATCTCTCGAG 59.371 41.667 5.93 5.93 0.00 4.04
2268 2494 4.934075 TCATTTTCACAAGCATCTCTCG 57.066 40.909 0.00 0.00 0.00 4.04
2296 2527 7.392393 ACAAATAAGAACGGGTGCTTAAGTAAT 59.608 33.333 4.02 0.00 31.10 1.89
2311 2542 6.035327 AGCGTCCGTGTTATACAAATAAGAAC 59.965 38.462 0.00 0.00 0.00 3.01
2355 2586 4.454728 TGCTTAATCACCATTGCTTTCC 57.545 40.909 0.00 0.00 0.00 3.13
2375 2606 9.484326 GTGCTTGTAAAAATAAACTGGTTTTTG 57.516 29.630 4.01 0.00 37.86 2.44
2383 2614 6.578023 TGCAAGGTGCTTGTAAAAATAAACT 58.422 32.000 1.43 0.00 45.31 2.66
2447 2678 0.099436 GGCTCCAACATGAATGTCGC 59.901 55.000 0.00 3.00 40.80 5.19
2448 2679 0.374758 CGGCTCCAACATGAATGTCG 59.625 55.000 0.00 0.00 40.80 4.35
2450 2681 2.198827 TTCGGCTCCAACATGAATGT 57.801 45.000 0.00 0.00 44.20 2.71
2565 2796 1.202855 AGCACTTCCATCACTGCTTGT 60.203 47.619 0.00 0.00 36.57 3.16
2566 2797 1.531423 AGCACTTCCATCACTGCTTG 58.469 50.000 0.00 0.00 36.57 4.01
2595 2826 5.582689 AGTTTGGCAAAGGAATAGCATAC 57.417 39.130 13.94 0.00 0.00 2.39
2741 2973 1.370414 CCAAGCGACAAAACTGCCG 60.370 57.895 0.00 0.00 0.00 5.69
2804 3036 5.500234 AGCAGACTTTTATGCATAACAGGA 58.500 37.500 27.79 10.25 45.01 3.86
2805 3037 5.824904 AGCAGACTTTTATGCATAACAGG 57.175 39.130 27.79 18.61 45.01 4.00
2821 3053 7.439157 TTGGATAATACATTGCATAGCAGAC 57.561 36.000 0.00 0.00 40.61 3.51
3098 3366 9.996554 TTACTTCTGAGAAAGTAATGTCATCAA 57.003 29.630 10.88 0.00 43.39 2.57
3144 3412 1.335597 GCACAGTTACTTTTTCCCCGC 60.336 52.381 0.00 0.00 0.00 6.13
3185 3453 3.498397 GTGAAATACATGGCCGGACATAG 59.502 47.826 25.84 19.61 0.00 2.23
3191 3459 4.974368 TTAAAGTGAAATACATGGCCGG 57.026 40.909 0.00 0.00 0.00 6.13
3521 3793 5.685728 AGGGAGTATAAAGCACTGAATTCC 58.314 41.667 2.27 0.00 0.00 3.01
3538 3810 8.979534 AGACTTATATTTAGAAACGAAGGGAGT 58.020 33.333 0.00 0.00 0.00 3.85
3539 3811 9.819267 AAGACTTATATTTAGAAACGAAGGGAG 57.181 33.333 0.00 0.00 0.00 4.30
3559 3831 9.261035 TCCATAGTAGAATCTCTTCAAAGACTT 57.739 33.333 0.00 0.00 33.56 3.01
3561 3833 7.923878 GGTCCATAGTAGAATCTCTTCAAAGAC 59.076 40.741 0.00 0.00 33.56 3.01
3563 3835 7.708752 GTGGTCCATAGTAGAATCTCTTCAAAG 59.291 40.741 0.00 0.00 33.56 2.77
3564 3836 7.180229 TGTGGTCCATAGTAGAATCTCTTCAAA 59.820 37.037 0.00 0.00 33.56 2.69
3565 3837 6.667848 TGTGGTCCATAGTAGAATCTCTTCAA 59.332 38.462 0.00 0.00 33.56 2.69
3566 3838 6.194967 TGTGGTCCATAGTAGAATCTCTTCA 58.805 40.000 0.00 0.00 33.56 3.02
3568 3840 7.040340 CGTATGTGGTCCATAGTAGAATCTCTT 60.040 40.741 0.00 0.00 36.71 2.85
3569 3841 6.431543 CGTATGTGGTCCATAGTAGAATCTCT 59.568 42.308 0.00 0.00 36.71 3.10
3570 3842 6.349445 CCGTATGTGGTCCATAGTAGAATCTC 60.349 46.154 0.00 0.00 36.71 2.75
3571 3843 5.477291 CCGTATGTGGTCCATAGTAGAATCT 59.523 44.000 0.00 0.00 36.71 2.40
3572 3844 5.475909 TCCGTATGTGGTCCATAGTAGAATC 59.524 44.000 0.00 0.00 36.71 2.52
3573 3845 5.391256 TCCGTATGTGGTCCATAGTAGAAT 58.609 41.667 0.00 0.00 36.71 2.40
3574 3846 4.795469 TCCGTATGTGGTCCATAGTAGAA 58.205 43.478 0.00 0.00 36.71 2.10
3575 3847 4.395625 CTCCGTATGTGGTCCATAGTAGA 58.604 47.826 0.00 0.00 36.71 2.59
3577 3849 2.889045 GCTCCGTATGTGGTCCATAGTA 59.111 50.000 0.00 0.00 36.71 1.82
3578 3850 1.687123 GCTCCGTATGTGGTCCATAGT 59.313 52.381 0.00 0.00 36.71 2.12
3579 3851 1.686587 TGCTCCGTATGTGGTCCATAG 59.313 52.381 0.00 0.00 36.71 2.23
3580 3852 1.783071 TGCTCCGTATGTGGTCCATA 58.217 50.000 0.00 0.00 34.86 2.74
3581 3853 0.908910 TTGCTCCGTATGTGGTCCAT 59.091 50.000 0.00 0.00 37.58 3.41
3582 3854 0.687920 TTTGCTCCGTATGTGGTCCA 59.312 50.000 0.00 0.00 0.00 4.02
3583 3855 1.816074 TTTTGCTCCGTATGTGGTCC 58.184 50.000 0.00 0.00 0.00 4.46
3584 3856 3.006940 TCATTTTGCTCCGTATGTGGTC 58.993 45.455 0.00 0.00 0.00 4.02
3585 3857 3.009723 CTCATTTTGCTCCGTATGTGGT 58.990 45.455 0.00 0.00 0.00 4.16
3586 3858 3.009723 ACTCATTTTGCTCCGTATGTGG 58.990 45.455 0.00 0.00 0.00 4.17
3587 3859 3.684305 TCACTCATTTTGCTCCGTATGTG 59.316 43.478 0.00 0.00 0.00 3.21
3588 3860 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
3589 3861 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
3590 3862 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
3591 3863 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
3592 3864 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
3593 3865 5.998454 ATAGATTCACTCATTTTGCTCCG 57.002 39.130 0.00 0.00 0.00 4.63
3594 3866 7.930865 AGAGTATAGATTCACTCATTTTGCTCC 59.069 37.037 4.70 0.00 42.99 4.70
3595 3867 8.885494 AGAGTATAGATTCACTCATTTTGCTC 57.115 34.615 4.70 0.00 42.99 4.26
3615 3887 9.935241 GGATGAATCTAGATGCATTTTAGAGTA 57.065 33.333 24.46 12.61 37.20 2.59
3616 3888 8.435187 TGGATGAATCTAGATGCATTTTAGAGT 58.565 33.333 24.46 18.51 37.20 3.24
3617 3889 8.843885 TGGATGAATCTAGATGCATTTTAGAG 57.156 34.615 24.46 4.24 37.20 2.43
3621 3893 9.529823 ACATATGGATGAATCTAGATGCATTTT 57.470 29.630 24.46 15.35 39.61 1.82
3622 3894 8.957466 CACATATGGATGAATCTAGATGCATTT 58.043 33.333 24.46 15.64 39.61 2.32
3623 3895 8.507524 CACATATGGATGAATCTAGATGCATT 57.492 34.615 24.46 13.24 39.61 3.56
3644 3916 9.685276 TTTGTAGAGATTTCATTATGACCACAT 57.315 29.630 0.00 0.00 40.16 3.21
3645 3917 9.166173 CTTTGTAGAGATTTCATTATGACCACA 57.834 33.333 0.00 0.00 0.00 4.17
3646 3918 9.383519 TCTTTGTAGAGATTTCATTATGACCAC 57.616 33.333 0.00 0.00 0.00 4.16
3647 3919 9.383519 GTCTTTGTAGAGATTTCATTATGACCA 57.616 33.333 0.00 0.00 0.00 4.02
3648 3920 9.606631 AGTCTTTGTAGAGATTTCATTATGACC 57.393 33.333 0.00 0.00 0.00 4.02
3666 3938 9.853177 CCTCCATTCCTAAATATAAGTCTTTGT 57.147 33.333 0.00 0.00 0.00 2.83
3667 3939 9.289782 CCCTCCATTCCTAAATATAAGTCTTTG 57.710 37.037 0.00 0.00 0.00 2.77
3668 3940 9.237706 TCCCTCCATTCCTAAATATAAGTCTTT 57.762 33.333 0.00 0.00 0.00 2.52
3669 3941 8.814448 TCCCTCCATTCCTAAATATAAGTCTT 57.186 34.615 0.00 0.00 0.00 3.01
3670 3942 8.019652 ACTCCCTCCATTCCTAAATATAAGTCT 58.980 37.037 0.00 0.00 0.00 3.24
3671 3943 8.208575 ACTCCCTCCATTCCTAAATATAAGTC 57.791 38.462 0.00 0.00 0.00 3.01
3672 3944 9.860393 ATACTCCCTCCATTCCTAAATATAAGT 57.140 33.333 0.00 0.00 0.00 2.24
3714 3986 9.807921 AGAAATGAGGATTTTAAAGAGTTACCA 57.192 29.630 0.00 0.00 31.58 3.25
3726 3998 7.649533 TCACATGCATAGAAATGAGGATTTT 57.350 32.000 0.00 0.00 34.84 1.82
3789 4061 6.201044 ACTTGTTCAGAACTGATAAACTCGTG 59.799 38.462 14.51 0.00 39.64 4.35
3840 4112 7.407393 AGTAGTGAATTGTCTAGAAGTACCC 57.593 40.000 0.00 0.00 0.00 3.69
3907 4179 4.218417 CGCATTATATTTTGGGAAGGAGGG 59.782 45.833 0.00 0.00 0.00 4.30
3908 4180 4.321230 GCGCATTATATTTTGGGAAGGAGG 60.321 45.833 0.30 0.00 0.00 4.30
3927 4199 0.516877 CAGAAAAGTCAATCGGCGCA 59.483 50.000 10.83 0.00 0.00 6.09
3932 4204 3.741344 ACGAAGACCAGAAAAGTCAATCG 59.259 43.478 13.79 13.79 44.49 3.34
4085 4357 7.430441 TGCACGACTTTGACTGCTAATATATA 58.570 34.615 0.00 0.00 0.00 0.86
4093 4365 1.151668 GATGCACGACTTTGACTGCT 58.848 50.000 0.00 0.00 0.00 4.24
4094 4366 0.867746 TGATGCACGACTTTGACTGC 59.132 50.000 0.00 0.00 0.00 4.40
4095 4367 3.248363 TCTTTGATGCACGACTTTGACTG 59.752 43.478 0.00 0.00 0.00 3.51
4135 4407 4.387437 CCCTCCTTCCCAAAATATAAGGCA 60.387 45.833 0.00 0.00 38.70 4.75
5137 5505 3.302365 ACAAATGATTGGCAAAGGACG 57.698 42.857 3.01 0.00 41.01 4.79
5219 5589 5.759059 TCCATGCACATTATCTCTCCTTTT 58.241 37.500 0.00 0.00 0.00 2.27
5220 5590 5.378230 TCCATGCACATTATCTCTCCTTT 57.622 39.130 0.00 0.00 0.00 3.11
5271 5675 2.279173 AGTGGGCCAGAAAATAGGACT 58.721 47.619 6.40 0.00 31.87 3.85
5390 5794 7.673180 TGGAGGACCACGGTAATAATAATAAG 58.327 38.462 0.00 0.00 41.77 1.73
5402 5806 2.106857 TGTTAAATTGGAGGACCACGGT 59.893 45.455 0.00 0.00 46.80 4.83
5408 5812 4.923281 GTGTGCAATGTTAAATTGGAGGAC 59.077 41.667 0.00 0.00 30.15 3.85
5943 6351 1.888512 TCTGCTGCCAAAAGCCTAAAG 59.111 47.619 0.00 0.00 42.83 1.85
6046 6471 9.099454 CCTCTGTAAAGAAATATAAGAGCGTTT 57.901 33.333 0.00 0.00 0.00 3.60
6049 6474 7.434492 TCCCTCTGTAAAGAAATATAAGAGCG 58.566 38.462 0.00 0.00 0.00 5.03
6050 6475 8.425703 ACTCCCTCTGTAAAGAAATATAAGAGC 58.574 37.037 0.00 0.00 0.00 4.09
6098 6523 2.612212 CCATAAAACCCATTCGACTCCG 59.388 50.000 0.00 0.00 37.07 4.63
6134 6559 5.991933 TTAATTTCCTACATGGCTGCAAA 57.008 34.783 0.50 0.00 35.26 3.68
6180 6605 5.814764 AGCATGCAACATTTTCAAACAAA 57.185 30.435 21.98 0.00 0.00 2.83
6379 6821 5.754890 TGCACATATCTACTACTTGCACATG 59.245 40.000 0.00 0.00 33.72 3.21
6385 7245 7.654923 ACATGACATGCACATATCTACTACTTG 59.345 37.037 15.49 0.00 0.00 3.16
6505 7366 1.832366 GGTCTACCCCAACCTCTCTTC 59.168 57.143 0.00 0.00 32.54 2.87
6628 7489 3.585862 GCAACCAACTCATAGTTCTCGA 58.414 45.455 0.00 0.00 36.03 4.04
6630 7491 3.585862 TCGCAACCAACTCATAGTTCTC 58.414 45.455 0.00 0.00 36.03 2.87
6988 7852 1.755179 TATTTTCCTCTGCCAGCTGC 58.245 50.000 8.66 4.57 41.77 5.25
7066 7930 7.545362 TCAAGCTGCACTTCTTATAAAGATC 57.455 36.000 1.02 0.00 36.04 2.75
7202 8073 4.022068 GCATCTTCAGGGACAACATTTTCA 60.022 41.667 0.00 0.00 0.00 2.69
7330 8201 4.662179 AGGATAAAGATGATGAGCAAGGGA 59.338 41.667 0.00 0.00 0.00 4.20
7369 8268 4.495844 GCGGATTCTACGAAGGAATTTTGG 60.496 45.833 0.00 0.00 34.09 3.28
7376 8275 0.458669 GTGGCGGATTCTACGAAGGA 59.541 55.000 0.00 0.00 0.00 3.36
7382 8281 6.431198 TTTTTCTTATGTGGCGGATTCTAC 57.569 37.500 0.00 0.00 0.00 2.59
7421 8320 8.552296 ACAATTTGGGACAGAGAGAATAACTAT 58.448 33.333 0.78 0.00 42.39 2.12
7435 8334 8.962679 GGAGTACAAAATATACAATTTGGGACA 58.037 33.333 0.78 0.00 40.09 4.02
7463 8363 2.101249 TCCGCCCAAAAGTATAGTACGG 59.899 50.000 0.00 0.00 39.44 4.02
7465 8365 3.493873 CCCTCCGCCCAAAAGTATAGTAC 60.494 52.174 0.00 0.00 0.00 2.73
7466 8366 2.701951 CCCTCCGCCCAAAAGTATAGTA 59.298 50.000 0.00 0.00 0.00 1.82
7467 8367 1.489230 CCCTCCGCCCAAAAGTATAGT 59.511 52.381 0.00 0.00 0.00 2.12
7468 8368 1.766496 TCCCTCCGCCCAAAAGTATAG 59.234 52.381 0.00 0.00 0.00 1.31
7489 8391 9.415544 CCGTCCCATAATAGTACAAAATAGTAC 57.584 37.037 0.00 0.00 43.61 2.73
7490 8392 9.365906 TCCGTCCCATAATAGTACAAAATAGTA 57.634 33.333 0.00 0.00 0.00 1.82
7491 8393 8.253867 TCCGTCCCATAATAGTACAAAATAGT 57.746 34.615 0.00 0.00 0.00 2.12
7492 8394 7.817962 CCTCCGTCCCATAATAGTACAAAATAG 59.182 40.741 0.00 0.00 0.00 1.73
7493 8395 7.256404 CCCTCCGTCCCATAATAGTACAAAATA 60.256 40.741 0.00 0.00 0.00 1.40
7494 8396 6.465321 CCCTCCGTCCCATAATAGTACAAAAT 60.465 42.308 0.00 0.00 0.00 1.82
7495 8397 5.163280 CCCTCCGTCCCATAATAGTACAAAA 60.163 44.000 0.00 0.00 0.00 2.44
7496 8398 4.345837 CCCTCCGTCCCATAATAGTACAAA 59.654 45.833 0.00 0.00 0.00 2.83
7497 8399 3.899360 CCCTCCGTCCCATAATAGTACAA 59.101 47.826 0.00 0.00 0.00 2.41
7498 8400 3.140707 TCCCTCCGTCCCATAATAGTACA 59.859 47.826 0.00 0.00 0.00 2.90
7507 8409 0.338814 AACTACTCCCTCCGTCCCAT 59.661 55.000 0.00 0.00 0.00 4.00
7538 8440 4.155709 AGAGTTGTCAGACTCATCTCCAA 58.844 43.478 1.31 0.00 46.69 3.53
7539 8441 3.772387 AGAGTTGTCAGACTCATCTCCA 58.228 45.455 1.31 0.00 46.69 3.86
7586 8490 4.648762 ACACACATTGATTCCCTCACAAAA 59.351 37.500 0.00 0.00 32.17 2.44
7590 8494 3.058016 CACACACACATTGATTCCCTCAC 60.058 47.826 0.00 0.00 32.17 3.51
7610 8514 2.364324 TGGTAACTCAGTCAGGTGACAC 59.636 50.000 12.54 0.00 42.33 3.67
7669 8574 4.608948 AGGTAACCTGTTGAGTGAAGAG 57.391 45.455 0.00 0.00 29.57 2.85
7769 8697 4.679373 TCATTCCAGTCAGCCTATCTTC 57.321 45.455 0.00 0.00 0.00 2.87
7821 8749 5.466819 AGACATAAAACGACAACTCGATCA 58.533 37.500 0.00 0.00 43.06 2.92
7944 8883 4.320494 GCAGGCACATATATAGTTTGCACC 60.320 45.833 12.57 2.15 34.76 5.01
8001 8946 2.403378 GCAAAGAACGGCGCCCATA 61.403 57.895 23.46 0.00 0.00 2.74
8002 8947 3.747976 GCAAAGAACGGCGCCCAT 61.748 61.111 23.46 10.13 0.00 4.00
8003 8948 4.947147 AGCAAAGAACGGCGCCCA 62.947 61.111 23.46 0.00 34.54 5.36
8004 8949 4.404654 CAGCAAAGAACGGCGCCC 62.405 66.667 23.46 7.02 34.54 6.13
8006 8951 4.030452 AGCAGCAAAGAACGGCGC 62.030 61.111 6.90 0.00 33.17 6.53
8007 8952 1.915614 ATCAGCAGCAAAGAACGGCG 61.916 55.000 4.80 4.80 33.17 6.46
8008 8953 0.455633 CATCAGCAGCAAAGAACGGC 60.456 55.000 0.00 0.00 0.00 5.68
8009 8954 1.159285 TCATCAGCAGCAAAGAACGG 58.841 50.000 0.00 0.00 0.00 4.44
8010 8955 2.975410 TTCATCAGCAGCAAAGAACG 57.025 45.000 0.00 0.00 0.00 3.95
8011 8956 4.797349 GCTTATTCATCAGCAGCAAAGAAC 59.203 41.667 0.00 0.00 35.95 3.01
8012 8957 4.437794 CGCTTATTCATCAGCAGCAAAGAA 60.438 41.667 0.00 0.00 35.60 2.52
8013 8958 3.064408 CGCTTATTCATCAGCAGCAAAGA 59.936 43.478 0.00 0.00 35.60 2.52
8014 8959 3.181503 ACGCTTATTCATCAGCAGCAAAG 60.182 43.478 0.00 0.00 35.60 2.77
8015 8960 2.749076 ACGCTTATTCATCAGCAGCAAA 59.251 40.909 0.00 0.00 35.60 3.68
8016 8961 2.096335 CACGCTTATTCATCAGCAGCAA 59.904 45.455 0.00 0.00 35.60 3.91
8017 8962 1.667212 CACGCTTATTCATCAGCAGCA 59.333 47.619 0.00 0.00 35.60 4.41
8018 8963 1.667724 ACACGCTTATTCATCAGCAGC 59.332 47.619 0.00 0.00 35.60 5.25
8019 8964 4.568359 ACTAACACGCTTATTCATCAGCAG 59.432 41.667 0.00 0.00 35.60 4.24
8020 8965 4.329801 CACTAACACGCTTATTCATCAGCA 59.670 41.667 0.00 0.00 35.60 4.41
8021 8966 4.566759 TCACTAACACGCTTATTCATCAGC 59.433 41.667 0.00 0.00 0.00 4.26
8022 8967 6.647212 TTCACTAACACGCTTATTCATCAG 57.353 37.500 0.00 0.00 0.00 2.90
8023 8968 7.609760 AATTCACTAACACGCTTATTCATCA 57.390 32.000 0.00 0.00 0.00 3.07
8024 8969 7.044706 GCAAATTCACTAACACGCTTATTCATC 60.045 37.037 0.00 0.00 0.00 2.92
8025 8970 6.747280 GCAAATTCACTAACACGCTTATTCAT 59.253 34.615 0.00 0.00 0.00 2.57
8026 8971 6.083630 GCAAATTCACTAACACGCTTATTCA 58.916 36.000 0.00 0.00 0.00 2.57
8027 8972 6.083630 TGCAAATTCACTAACACGCTTATTC 58.916 36.000 0.00 0.00 0.00 1.75
8028 8973 6.007936 TGCAAATTCACTAACACGCTTATT 57.992 33.333 0.00 0.00 0.00 1.40
8029 8974 5.621197 TGCAAATTCACTAACACGCTTAT 57.379 34.783 0.00 0.00 0.00 1.73
8053 9055 2.192664 TTTTGCCCTGTATCAGCGAA 57.807 45.000 0.00 0.00 0.00 4.70
8104 9109 2.106683 CGGTTCATTCCTGGGCGAC 61.107 63.158 0.00 0.00 0.00 5.19
8115 9120 1.276421 CACTGAAGGTCTCCGGTTCAT 59.724 52.381 0.00 0.00 30.03 2.57
8216 9221 6.073327 TCACGGATTGACACTATCATCTAC 57.927 41.667 0.00 0.00 37.11 2.59
8348 9361 7.913423 TGATTCTTTGAGCGAATTCTAATCTG 58.087 34.615 3.52 0.00 31.62 2.90
8399 9412 3.741344 GCTTAGCGAGAGTGTCTCAAAAA 59.259 43.478 4.87 0.00 43.55 1.94
8400 9413 3.005897 AGCTTAGCGAGAGTGTCTCAAAA 59.994 43.478 0.00 0.00 43.55 2.44
8401 9414 2.558795 AGCTTAGCGAGAGTGTCTCAAA 59.441 45.455 0.00 0.00 43.55 2.69
8402 9415 2.163509 AGCTTAGCGAGAGTGTCTCAA 58.836 47.619 0.00 0.00 43.55 3.02
8403 9416 1.827681 AGCTTAGCGAGAGTGTCTCA 58.172 50.000 0.00 0.00 43.55 3.27
8404 9417 2.931512 AAGCTTAGCGAGAGTGTCTC 57.068 50.000 0.00 0.00 40.06 3.36
8405 9418 3.669251 AAAAGCTTAGCGAGAGTGTCT 57.331 42.857 0.00 0.00 0.00 3.41
8406 9419 5.577164 TGAATAAAAGCTTAGCGAGAGTGTC 59.423 40.000 0.00 0.00 0.00 3.67
8407 9420 5.479306 TGAATAAAAGCTTAGCGAGAGTGT 58.521 37.500 0.00 0.00 0.00 3.55
8408 9421 6.244275 GTTGAATAAAAGCTTAGCGAGAGTG 58.756 40.000 0.00 0.00 0.00 3.51
8448 9461 6.075315 ACCTGGACAGCTTTAATTTTTACCT 58.925 36.000 0.00 0.00 0.00 3.08
8449 9462 6.340962 ACCTGGACAGCTTTAATTTTTACC 57.659 37.500 0.00 0.00 0.00 2.85
8450 9463 7.381408 GTCAACCTGGACAGCTTTAATTTTTAC 59.619 37.037 0.00 0.00 37.73 2.01
8451 9464 7.430441 GTCAACCTGGACAGCTTTAATTTTTA 58.570 34.615 0.00 0.00 37.73 1.52
8452 9465 6.280643 GTCAACCTGGACAGCTTTAATTTTT 58.719 36.000 0.00 0.00 37.73 1.94
8453 9466 5.221441 GGTCAACCTGGACAGCTTTAATTTT 60.221 40.000 0.00 0.00 39.59 1.82
8454 9467 4.280929 GGTCAACCTGGACAGCTTTAATTT 59.719 41.667 0.00 0.00 39.59 1.82
8455 9468 3.826729 GGTCAACCTGGACAGCTTTAATT 59.173 43.478 0.00 0.00 39.59 1.40
8456 9469 3.074538 AGGTCAACCTGGACAGCTTTAAT 59.925 43.478 0.00 0.00 46.55 1.40
8459 9472 0.846693 AGGTCAACCTGGACAGCTTT 59.153 50.000 0.00 0.00 46.55 3.51
8486 9499 1.621814 CTCTCGGGTTTGGTCACCTTA 59.378 52.381 0.00 0.00 36.97 2.69
8488 9501 0.763223 ACTCTCGGGTTTGGTCACCT 60.763 55.000 0.00 0.00 36.97 4.00
8491 9504 3.388676 TCTTTAACTCTCGGGTTTGGTCA 59.611 43.478 0.00 0.00 0.00 4.02
8512 9525 3.001736 GCTCACAATCTCGTTAGGCATTC 59.998 47.826 0.00 0.00 0.00 2.67
8548 9561 9.529325 TTGTAATATCGTTCATGAGTTTAGGAG 57.471 33.333 0.00 0.00 0.00 3.69
8594 9607 6.788598 ATGGAGCTATCGTGATCATAGATT 57.211 37.500 17.85 4.81 0.00 2.40
8595 9608 7.059788 AGTATGGAGCTATCGTGATCATAGAT 58.940 38.462 17.11 17.11 0.00 1.98
8604 9617 2.320367 GCGAAGTATGGAGCTATCGTG 58.680 52.381 0.00 0.00 33.18 4.35
8605 9618 1.269998 GGCGAAGTATGGAGCTATCGT 59.730 52.381 0.00 0.00 33.18 3.73
8607 9620 1.983972 CGGCGAAGTATGGAGCTATC 58.016 55.000 0.00 0.00 0.00 2.08
8608 9621 0.038159 GCGGCGAAGTATGGAGCTAT 60.038 55.000 12.98 0.00 0.00 2.97
8609 9622 1.362717 GCGGCGAAGTATGGAGCTA 59.637 57.895 12.98 0.00 0.00 3.32
8610 9623 2.107141 GCGGCGAAGTATGGAGCT 59.893 61.111 12.98 0.00 0.00 4.09
8611 9624 3.330853 CGCGGCGAAGTATGGAGC 61.331 66.667 19.16 0.00 0.00 4.70
8613 9626 2.023414 ATTCCGCGGCGAAGTATGGA 62.023 55.000 25.92 7.60 0.00 3.41
8614 9627 1.157870 AATTCCGCGGCGAAGTATGG 61.158 55.000 25.92 4.96 0.00 2.74
8615 9628 0.655733 AAATTCCGCGGCGAAGTATG 59.344 50.000 25.92 5.78 0.00 2.39
8622 9639 2.126502 AAGCAAAATTCCGCGGCG 60.127 55.556 23.51 16.78 0.00 6.46
8626 9643 1.913403 CGACATCAAGCAAAATTCCGC 59.087 47.619 0.00 0.00 0.00 5.54
8629 9646 4.382754 GGTGAACGACATCAAGCAAAATTC 59.617 41.667 0.00 0.00 0.00 2.17
8646 9663 0.814010 ACTGCAAGACGGTGGTGAAC 60.814 55.000 0.00 0.00 36.16 3.18
8661 9678 2.780065 TTCACATTGCAAGTGACTGC 57.220 45.000 22.90 0.00 44.95 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.