Multiple sequence alignment - TraesCS7D01G173000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G173000 chr7D 100.000 6478 0 0 1 6478 124845992 124839515 0.000000e+00 11963.0
1 TraesCS7D01G173000 chr7A 93.648 3495 141 39 3012 6478 127048374 127044933 0.000000e+00 5149.0
2 TraesCS7D01G173000 chr7A 93.038 2255 109 24 497 2719 127050682 127048444 0.000000e+00 3251.0
3 TraesCS7D01G173000 chr7A 88.618 246 22 5 7 250 127066471 127066230 1.770000e-75 294.0
4 TraesCS7D01G173000 chr7A 90.909 209 18 1 247 454 127050887 127050679 4.950000e-71 279.0
5 TraesCS7D01G173000 chr7A 87.805 82 8 2 1378 1457 127049847 127049766 1.920000e-15 95.3
6 TraesCS7D01G173000 chr7A 100.000 38 0 0 1496 1533 113110553 113110590 3.240000e-08 71.3
7 TraesCS7D01G173000 chr7B 92.619 2371 138 17 360 2713 86671443 86669093 0.000000e+00 3374.0
8 TraesCS7D01G173000 chr7B 94.976 1672 65 11 3021 4686 86669092 86667434 0.000000e+00 2604.0
9 TraesCS7D01G173000 chr7B 92.496 1386 59 19 4685 6058 86667352 86666000 0.000000e+00 1941.0
10 TraesCS7D01G173000 chr7B 89.835 364 27 6 6122 6478 86665994 86665634 5.920000e-125 459.0
11 TraesCS7D01G173000 chr7B 91.065 291 24 2 66 356 86671790 86671502 6.090000e-105 392.0
12 TraesCS7D01G173000 chr7B 95.890 73 1 2 1 71 86672165 86672093 4.100000e-22 117.0
13 TraesCS7D01G173000 chr7B 88.095 84 8 2 2554 2637 537199354 537199273 1.490000e-16 99.0
14 TraesCS7D01G173000 chr7B 87.209 86 10 1 2934 3019 361205479 361205563 5.350000e-16 97.1
15 TraesCS7D01G173000 chr7B 89.831 59 5 1 2587 2645 697608937 697608880 2.510000e-09 75.0
16 TraesCS7D01G173000 chr7B 100.000 38 0 0 1496 1533 148948213 148948250 3.240000e-08 71.3
17 TraesCS7D01G173000 chr1D 89.032 310 30 4 2712 3019 182028517 182028824 1.320000e-101 381.0
18 TraesCS7D01G173000 chr1A 86.408 309 22 12 2712 3019 170995205 170995494 2.910000e-83 320.0
19 TraesCS7D01G173000 chr1B 83.987 306 35 10 2717 3020 252969053 252969346 1.380000e-71 281.0
20 TraesCS7D01G173000 chr1B 100.000 38 0 0 1496 1533 40487860 40487897 3.240000e-08 71.3
21 TraesCS7D01G173000 chr1B 97.368 38 1 0 1496 1533 144272898 144272861 1.510000e-06 65.8
22 TraesCS7D01G173000 chr6B 86.047 86 11 1 2934 3019 335171283 335171367 2.490000e-14 91.6
23 TraesCS7D01G173000 chr6B 87.879 66 6 2 2583 2647 79850705 79850641 6.960000e-10 76.8
24 TraesCS7D01G173000 chr6B 100.000 38 0 0 1496 1533 708553378 708553415 3.240000e-08 71.3
25 TraesCS7D01G173000 chr6D 95.833 48 2 0 2595 2642 137533006 137532959 1.940000e-10 78.7
26 TraesCS7D01G173000 chr6A 94.118 51 3 0 2587 2637 79953817 79953767 1.940000e-10 78.7
27 TraesCS7D01G173000 chr4B 94.118 51 3 0 2587 2637 322692992 322692942 1.940000e-10 78.7
28 TraesCS7D01G173000 chr4B 91.837 49 4 0 2548 2596 622190745 622190793 1.170000e-07 69.4
29 TraesCS7D01G173000 chr5B 92.453 53 4 0 2589 2641 653710046 653710098 6.960000e-10 76.8
30 TraesCS7D01G173000 chr5B 93.878 49 3 0 2590 2638 549412450 549412402 2.510000e-09 75.0
31 TraesCS7D01G173000 chr5B 100.000 38 0 0 1496 1533 416464745 416464708 3.240000e-08 71.3
32 TraesCS7D01G173000 chr5B 100.000 38 0 0 1496 1533 421517166 421517129 3.240000e-08 71.3
33 TraesCS7D01G173000 chr5B 91.837 49 4 0 2548 2596 474902471 474902519 1.170000e-07 69.4
34 TraesCS7D01G173000 chr4A 97.674 43 1 0 2554 2596 604043423 604043381 2.510000e-09 75.0
35 TraesCS7D01G173000 chr5A 100.000 38 0 0 1496 1533 400399094 400399057 3.240000e-08 71.3
36 TraesCS7D01G173000 chr2D 95.455 44 2 0 2553 2596 239985349 239985306 3.240000e-08 71.3
37 TraesCS7D01G173000 chr2A 95.455 44 2 0 2553 2596 258358919 258358876 3.240000e-08 71.3
38 TraesCS7D01G173000 chr2B 93.478 46 3 0 2551 2596 555275689 555275644 1.170000e-07 69.4
39 TraesCS7D01G173000 chr2B 94.595 37 2 0 417 453 714017830 714017794 2.520000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G173000 chr7D 124839515 124845992 6477 True 11963.000000 11963 100.0000 1 6478 1 chr7D.!!$R1 6477
1 TraesCS7D01G173000 chr7A 127044933 127050887 5954 True 2193.575000 5149 91.3500 247 6478 4 chr7A.!!$R2 6231
2 TraesCS7D01G173000 chr7B 86665634 86672165 6531 True 1481.166667 3374 92.8135 1 6478 6 chr7B.!!$R3 6477

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
194 505 0.251297 CATTGACACCTCCAAGGCCA 60.251 55.000 5.01 0.00 39.63 5.36 F
674 1049 0.478072 AGCTTTGACCCATCACCACA 59.522 50.000 0.00 0.00 33.38 4.17 F
840 1221 0.540830 ATCTCCTCCCTTCCGATCCG 60.541 60.000 0.00 0.00 0.00 4.18 F
1272 1662 0.741221 GGGAGATCTGTTGCACGTCC 60.741 60.000 0.00 0.00 0.00 4.79 F
2787 3206 0.245539 TAGGACGCACAGTTACAGCC 59.754 55.000 0.00 0.00 0.00 4.85 F
2907 3326 0.036388 TGGGACAAAGGAGATCGTGC 60.036 55.000 0.00 0.00 31.92 5.34 F
2947 3366 0.108138 AGTTACCTCTGTGCGATGGC 60.108 55.000 0.00 0.00 40.52 4.40 F
2949 3368 0.175760 TTACCTCTGTGCGATGGCTC 59.824 55.000 0.15 0.00 40.82 4.70 F
2958 3377 0.245266 TGCGATGGCTCACGTAAGAA 59.755 50.000 0.15 0.00 40.82 2.52 F
3109 3532 0.323629 TAAGAACCCCTGGCAGAACG 59.676 55.000 17.94 4.95 0.00 3.95 F
4115 4539 0.674581 TCCTGTGATTGGCGCTTCAG 60.675 55.000 7.64 7.14 0.00 3.02 F
4154 4578 1.620323 GTTCCTTGATGGCAAAGGCTT 59.380 47.619 12.26 0.00 40.87 4.35 F
4451 4883 1.842562 AGTGGAGTGATTCCCCTCATG 59.157 52.381 0.00 0.00 46.19 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1210 1600 0.035458 ACAAGTGGAAAGGAGCGAGG 59.965 55.000 0.00 0.0 0.00 4.63 R
1721 2116 1.002684 AGATCGCTAAGACGCTAACCG 60.003 52.381 0.00 0.0 44.21 4.44 R
2768 3187 0.245539 GGCTGTAACTGTGCGTCCTA 59.754 55.000 0.00 0.0 0.00 2.94 R
2888 3307 0.036388 GCACGATCTCCTTTGTCCCA 60.036 55.000 0.00 0.0 0.00 4.37 R
4115 4539 0.940126 CGTAGCATGGATGGTTGAGC 59.060 55.000 0.00 0.0 39.52 4.26 R
4269 4693 3.118629 TGGTGTGGCTAGTGAAGATGATC 60.119 47.826 0.00 0.0 0.00 2.92 R
4563 4995 3.355077 ATGGAAACCGCCATGACAA 57.645 47.368 0.00 0.0 46.62 3.18 R
4689 5124 5.293079 GCTTGATCCATTGTCTTCTACTGTC 59.707 44.000 0.00 0.0 0.00 3.51 R
4820 5338 5.629133 GCCCTCATGACAAGGAGTATAAACA 60.629 44.000 5.97 0.0 35.83 2.83 R
5096 5626 1.101635 CCTGATCCCATGCAGCACTG 61.102 60.000 0.00 0.0 0.00 3.66 R
5264 5794 0.468226 ACCGTTTCTGCTCCTCAACA 59.532 50.000 0.00 0.0 0.00 3.33 R
5265 5795 1.149148 GACCGTTTCTGCTCCTCAAC 58.851 55.000 0.00 0.0 0.00 3.18 R
6244 6783 0.249657 CTTCGGCATAGAGAGTGGGC 60.250 60.000 0.00 0.0 0.00 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
79 390 8.974060 TTCTGAAACAACCTTAGATTGTTAGT 57.026 30.769 4.99 0.00 46.88 2.24
81 392 9.052759 TCTGAAACAACCTTAGATTGTTAGTTC 57.947 33.333 4.99 0.63 46.88 3.01
107 418 9.848172 CAAAGTGTTCTAAATTTGTATGTTTGC 57.152 29.630 0.00 0.00 0.00 3.68
108 419 9.816354 AAAGTGTTCTAAATTTGTATGTTTGCT 57.184 25.926 0.00 0.00 0.00 3.91
112 423 8.296713 TGTTCTAAATTTGTATGTTTGCTCCTC 58.703 33.333 0.00 0.00 0.00 3.71
113 424 7.391148 TCTAAATTTGTATGTTTGCTCCTCC 57.609 36.000 0.00 0.00 0.00 4.30
129 440 6.357367 TGCTCCTCCCTTAACATTTTATCTC 58.643 40.000 0.00 0.00 0.00 2.75
149 460 4.849810 TCTCTTCCATTGGTCCCTCTTTAA 59.150 41.667 1.86 0.00 0.00 1.52
154 465 6.590656 TCCATTGGTCCCTCTTTAATATGT 57.409 37.500 1.86 0.00 0.00 2.29
157 468 8.561769 TCCATTGGTCCCTCTTTAATATGTTTA 58.438 33.333 1.86 0.00 0.00 2.01
158 469 8.630037 CCATTGGTCCCTCTTTAATATGTTTAC 58.370 37.037 0.00 0.00 0.00 2.01
178 489 0.982852 TGGCTCCGTCCCTGATCATT 60.983 55.000 0.00 0.00 0.00 2.57
180 491 0.465705 GCTCCGTCCCTGATCATTGA 59.534 55.000 0.00 0.00 0.00 2.57
189 500 2.025981 CCCTGATCATTGACACCTCCAA 60.026 50.000 0.00 0.00 0.00 3.53
194 505 0.251297 CATTGACACCTCCAAGGCCA 60.251 55.000 5.01 0.00 39.63 5.36
201 512 2.348998 CTCCAAGGCCAACTCGCT 59.651 61.111 5.01 0.00 0.00 4.93
233 544 5.016831 TCAACTACAAGCAGATCCTCTACA 58.983 41.667 0.00 0.00 0.00 2.74
238 549 7.398024 ACTACAAGCAGATCCTCTACAAATTT 58.602 34.615 0.00 0.00 0.00 1.82
277 588 4.613925 TGATTCTCATCCATGCCTAGAC 57.386 45.455 0.00 0.00 0.00 2.59
280 591 1.957177 TCTCATCCATGCCTAGACGAC 59.043 52.381 0.00 0.00 0.00 4.34
339 650 4.528987 TGTTATGTGAGTAGCCTGTTGGTA 59.471 41.667 0.00 0.00 35.27 3.25
381 747 2.285024 GGCCTTGGCTCCATGCAAA 61.285 57.895 11.71 0.00 45.15 3.68
412 778 3.135225 TGACCGATTCATGTTCGTGTTT 58.865 40.909 15.90 2.41 34.85 2.83
414 780 4.150980 TGACCGATTCATGTTCGTGTTTAC 59.849 41.667 15.90 6.46 34.85 2.01
433 800 6.758886 TGTTTACCATTTTCTTTCGTTGCAAT 59.241 30.769 0.59 0.00 0.00 3.56
438 805 1.752753 TTCTTTCGTTGCAATGCACG 58.247 45.000 7.72 15.06 38.71 5.34
448 815 2.911484 TGCAATGCACGGACATATGTA 58.089 42.857 8.71 0.00 31.71 2.29
453 820 3.364889 TGCACGGACATATGTACTAGC 57.635 47.619 16.10 17.92 0.00 3.42
456 823 4.202212 TGCACGGACATATGTACTAGCATT 60.202 41.667 22.87 0.00 33.45 3.56
459 826 6.238374 GCACGGACATATGTACTAGCATTTTT 60.238 38.462 20.47 0.00 0.00 1.94
507 874 4.913355 TCTCTGAAAATATAGCCCCCATGA 59.087 41.667 0.00 0.00 0.00 3.07
533 900 1.276622 TCAAACAGGCCCTCCTACTC 58.723 55.000 0.00 0.00 41.93 2.59
538 905 2.349445 ACAGGCCCTCCTACTCTTTTT 58.651 47.619 0.00 0.00 41.93 1.94
674 1049 0.478072 AGCTTTGACCCATCACCACA 59.522 50.000 0.00 0.00 33.38 4.17
768 1144 1.221466 CGCAGAAGCTCACGGAAACA 61.221 55.000 0.00 0.00 39.10 2.83
771 1147 1.528586 CAGAAGCTCACGGAAACACAG 59.471 52.381 0.00 0.00 0.00 3.66
839 1220 0.972883 CATCTCCTCCCTTCCGATCC 59.027 60.000 0.00 0.00 0.00 3.36
840 1221 0.540830 ATCTCCTCCCTTCCGATCCG 60.541 60.000 0.00 0.00 0.00 4.18
855 1236 1.197430 ATCCGCCATCTCCATCTCCC 61.197 60.000 0.00 0.00 0.00 4.30
894 1276 3.162154 CCGCTAGTCCCCCTTCCC 61.162 72.222 0.00 0.00 0.00 3.97
923 1313 4.394712 AGCGCAAACCCTCCCTCG 62.395 66.667 11.47 0.00 0.00 4.63
1208 1598 2.368878 GCTTCCCCCATCCTCCCT 60.369 66.667 0.00 0.00 0.00 4.20
1210 1600 1.772156 CTTCCCCCATCCTCCCTCC 60.772 68.421 0.00 0.00 0.00 4.30
1219 1609 4.150454 CCTCCCTCCCTCGCTCCT 62.150 72.222 0.00 0.00 0.00 3.69
1221 1611 1.687493 CTCCCTCCCTCGCTCCTTT 60.687 63.158 0.00 0.00 0.00 3.11
1267 1657 2.787473 AATTCGGGAGATCTGTTGCA 57.213 45.000 0.00 0.00 39.57 4.08
1272 1662 0.741221 GGGAGATCTGTTGCACGTCC 60.741 60.000 0.00 0.00 0.00 4.79
1319 1711 3.320879 CTGCGGCCTCATGGAGTGT 62.321 63.158 0.00 0.00 34.57 3.55
1337 1729 5.018539 AGTGTAATCATAGCTGCGGTTAA 57.981 39.130 0.00 0.00 0.00 2.01
1374 1766 3.257469 TCTGAGATTGGTCACTGATGC 57.743 47.619 0.00 0.00 0.00 3.91
1420 1812 6.581388 TTTAGAGATTCTGGGATTGGTCAT 57.419 37.500 0.00 0.00 0.00 3.06
1464 1859 3.486542 GCTTGATTTGAGATTGGTCGCTC 60.487 47.826 0.00 0.00 0.00 5.03
1544 1939 7.806690 TGTTATGAAAATTTCTCTGGAGTTCG 58.193 34.615 7.29 0.00 0.00 3.95
1558 1953 2.872858 GGAGTTCGATTAGTTGATGGGC 59.127 50.000 0.00 0.00 0.00 5.36
1591 1986 2.610433 GTCACTCGATTCATCACTGCA 58.390 47.619 0.00 0.00 0.00 4.41
1596 1991 4.567959 CACTCGATTCATCACTGCATGTTA 59.432 41.667 0.00 0.00 0.00 2.41
1612 2007 8.368668 ACTGCATGTTACTAGTTCTCTTAGTTT 58.631 33.333 0.00 0.00 0.00 2.66
1744 2139 3.436496 GTTAGCGTCTTAGCGATCTTGT 58.564 45.455 0.00 0.00 43.00 3.16
1763 2158 2.761208 TGTGTGTTTGGGGTTTGGTTAG 59.239 45.455 0.00 0.00 0.00 2.34
1829 2224 3.069443 AGGTTTTGCATTGTGGTACTTGG 59.931 43.478 0.00 0.00 0.00 3.61
2068 2463 8.911918 TTGGTAGTCATTTATGTAGTTTGTGT 57.088 30.769 0.00 0.00 0.00 3.72
2378 2773 4.514066 GGTTCCTATTTACACCTAATGGCG 59.486 45.833 0.00 0.00 36.63 5.69
2469 2864 1.740025 GTGAGCTGGCAAAGGTACATC 59.260 52.381 0.00 0.00 36.52 3.06
2470 2865 1.630369 TGAGCTGGCAAAGGTACATCT 59.370 47.619 0.00 0.00 36.52 2.90
2471 2866 2.040278 TGAGCTGGCAAAGGTACATCTT 59.960 45.455 0.00 0.00 36.52 2.40
2564 2960 5.365619 TGAAGAAAATAATACTCCCTCCGC 58.634 41.667 0.00 0.00 0.00 5.54
2625 3044 3.947910 TCTTCGACAAGTATTTCCGGT 57.052 42.857 0.00 0.00 0.00 5.28
2649 3068 6.543831 GTCGGAGGGAGTAAGTAACTATGTTA 59.456 42.308 0.00 0.00 39.07 2.41
2719 3138 5.639506 CACTGACACTATTTTGTACTCCCTG 59.360 44.000 0.00 0.00 0.00 4.45
2721 3140 4.286032 TGACACTATTTTGTACTCCCTGCT 59.714 41.667 0.00 0.00 0.00 4.24
2723 3142 5.246307 ACACTATTTTGTACTCCCTGCTTC 58.754 41.667 0.00 0.00 0.00 3.86
2724 3143 4.636206 CACTATTTTGTACTCCCTGCTTCC 59.364 45.833 0.00 0.00 0.00 3.46
2725 3144 2.579410 TTTTGTACTCCCTGCTTCCC 57.421 50.000 0.00 0.00 0.00 3.97
2726 3145 1.440618 TTTGTACTCCCTGCTTCCCA 58.559 50.000 0.00 0.00 0.00 4.37
2731 3150 2.222227 ACTCCCTGCTTCCCAAAATC 57.778 50.000 0.00 0.00 0.00 2.17
2733 3152 2.110721 ACTCCCTGCTTCCCAAAATCTT 59.889 45.455 0.00 0.00 0.00 2.40
2734 3153 2.494870 CTCCCTGCTTCCCAAAATCTTG 59.505 50.000 0.00 0.00 0.00 3.02
2750 3169 8.118893 CAAAATCTTGGGCGTATTAAATTCTG 57.881 34.615 0.00 0.00 0.00 3.02
2751 3170 4.893424 TCTTGGGCGTATTAAATTCTGC 57.107 40.909 0.00 0.00 0.00 4.26
2753 3172 4.887071 TCTTGGGCGTATTAAATTCTGCAT 59.113 37.500 0.00 0.00 0.00 3.96
2754 3173 4.566545 TGGGCGTATTAAATTCTGCATG 57.433 40.909 0.00 0.00 0.00 4.06
2755 3174 3.243367 TGGGCGTATTAAATTCTGCATGC 60.243 43.478 11.82 11.82 0.00 4.06
2756 3175 3.243367 GGGCGTATTAAATTCTGCATGCA 60.243 43.478 21.29 21.29 0.00 3.96
2758 3177 4.984161 GGCGTATTAAATTCTGCATGCAAT 59.016 37.500 22.88 10.65 0.00 3.56
2760 3179 6.346040 GGCGTATTAAATTCTGCATGCAATTC 60.346 38.462 22.88 7.28 0.00 2.17
2761 3180 6.346040 GCGTATTAAATTCTGCATGCAATTCC 60.346 38.462 22.88 4.10 0.00 3.01
2762 3181 6.696583 CGTATTAAATTCTGCATGCAATTCCA 59.303 34.615 22.88 9.72 0.00 3.53
2763 3182 7.383029 CGTATTAAATTCTGCATGCAATTCCAT 59.617 33.333 22.88 15.34 0.00 3.41
2764 3183 9.695526 GTATTAAATTCTGCATGCAATTCCATA 57.304 29.630 22.88 14.48 0.00 2.74
2766 3185 9.787435 ATTAAATTCTGCATGCAATTCCATAAT 57.213 25.926 22.88 17.18 0.00 1.28
2771 3190 7.634671 TCTGCATGCAATTCCATAATATAGG 57.365 36.000 22.88 3.94 0.00 2.57
2772 3191 7.404481 TCTGCATGCAATTCCATAATATAGGA 58.596 34.615 22.88 6.44 0.00 2.94
2773 3192 7.337689 TCTGCATGCAATTCCATAATATAGGAC 59.662 37.037 22.88 0.00 32.62 3.85
2774 3193 6.093909 TGCATGCAATTCCATAATATAGGACG 59.906 38.462 20.30 0.00 32.62 4.79
2775 3194 6.489675 CATGCAATTCCATAATATAGGACGC 58.510 40.000 0.00 0.00 32.62 5.19
2776 3195 5.555966 TGCAATTCCATAATATAGGACGCA 58.444 37.500 0.00 0.00 33.76 5.24
2777 3196 5.411361 TGCAATTCCATAATATAGGACGCAC 59.589 40.000 0.00 0.00 32.20 5.34
2778 3197 5.411361 GCAATTCCATAATATAGGACGCACA 59.589 40.000 0.00 0.00 32.62 4.57
2779 3198 6.402550 GCAATTCCATAATATAGGACGCACAG 60.403 42.308 0.00 0.00 32.62 3.66
2781 3200 5.801531 TCCATAATATAGGACGCACAGTT 57.198 39.130 0.00 0.00 0.00 3.16
2782 3201 6.904463 TCCATAATATAGGACGCACAGTTA 57.096 37.500 0.00 0.00 0.00 2.24
2783 3202 6.684686 TCCATAATATAGGACGCACAGTTAC 58.315 40.000 0.00 0.00 0.00 2.50
2784 3203 6.265876 TCCATAATATAGGACGCACAGTTACA 59.734 38.462 0.00 0.00 0.00 2.41
2785 3204 6.586463 CCATAATATAGGACGCACAGTTACAG 59.414 42.308 0.00 0.00 0.00 2.74
2787 3206 0.245539 TAGGACGCACAGTTACAGCC 59.754 55.000 0.00 0.00 0.00 4.85
2788 3207 1.004918 GGACGCACAGTTACAGCCT 60.005 57.895 0.00 0.00 0.00 4.58
2789 3208 1.014564 GGACGCACAGTTACAGCCTC 61.015 60.000 0.00 0.00 0.00 4.70
2790 3209 0.319555 GACGCACAGTTACAGCCTCA 60.320 55.000 0.00 0.00 0.00 3.86
2791 3210 0.600255 ACGCACAGTTACAGCCTCAC 60.600 55.000 0.00 0.00 0.00 3.51
2792 3211 1.291877 CGCACAGTTACAGCCTCACC 61.292 60.000 0.00 0.00 0.00 4.02
2793 3212 0.250295 GCACAGTTACAGCCTCACCA 60.250 55.000 0.00 0.00 0.00 4.17
2794 3213 1.813862 GCACAGTTACAGCCTCACCAA 60.814 52.381 0.00 0.00 0.00 3.67
2795 3214 1.873591 CACAGTTACAGCCTCACCAAC 59.126 52.381 0.00 0.00 0.00 3.77
2796 3215 1.148310 CAGTTACAGCCTCACCAACG 58.852 55.000 0.00 0.00 0.00 4.10
2797 3216 1.045407 AGTTACAGCCTCACCAACGA 58.955 50.000 0.00 0.00 0.00 3.85
2798 3217 1.623811 AGTTACAGCCTCACCAACGAT 59.376 47.619 0.00 0.00 0.00 3.73
2799 3218 2.038557 AGTTACAGCCTCACCAACGATT 59.961 45.455 0.00 0.00 0.00 3.34
2800 3219 3.259876 AGTTACAGCCTCACCAACGATTA 59.740 43.478 0.00 0.00 0.00 1.75
2801 3220 2.386661 ACAGCCTCACCAACGATTAG 57.613 50.000 0.00 0.00 0.00 1.73
2802 3221 1.009829 CAGCCTCACCAACGATTAGC 58.990 55.000 0.00 0.00 0.00 3.09
2803 3222 0.905357 AGCCTCACCAACGATTAGCT 59.095 50.000 0.00 0.00 0.00 3.32
2804 3223 2.108168 AGCCTCACCAACGATTAGCTA 58.892 47.619 0.00 0.00 0.00 3.32
2805 3224 2.159085 AGCCTCACCAACGATTAGCTAC 60.159 50.000 0.00 0.00 0.00 3.58
2806 3225 2.159085 GCCTCACCAACGATTAGCTACT 60.159 50.000 0.00 0.00 0.00 2.57
2807 3226 3.679083 GCCTCACCAACGATTAGCTACTT 60.679 47.826 0.00 0.00 0.00 2.24
2808 3227 4.504858 CCTCACCAACGATTAGCTACTTT 58.495 43.478 0.00 0.00 0.00 2.66
2809 3228 4.935808 CCTCACCAACGATTAGCTACTTTT 59.064 41.667 0.00 0.00 0.00 2.27
2810 3229 5.163854 CCTCACCAACGATTAGCTACTTTTG 60.164 44.000 0.00 0.00 0.00 2.44
2811 3230 5.302360 TCACCAACGATTAGCTACTTTTGT 58.698 37.500 0.00 0.00 0.00 2.83
2812 3231 5.178623 TCACCAACGATTAGCTACTTTTGTG 59.821 40.000 0.00 0.00 0.00 3.33
2813 3232 4.454504 ACCAACGATTAGCTACTTTTGTGG 59.545 41.667 0.00 0.00 0.00 4.17
2814 3233 4.693566 CCAACGATTAGCTACTTTTGTGGA 59.306 41.667 0.00 0.00 32.14 4.02
2815 3234 5.180492 CCAACGATTAGCTACTTTTGTGGAA 59.820 40.000 0.00 0.00 32.14 3.53
2816 3235 6.293735 CCAACGATTAGCTACTTTTGTGGAAA 60.294 38.462 0.00 0.00 32.14 3.13
2817 3236 6.870971 ACGATTAGCTACTTTTGTGGAAAA 57.129 33.333 0.00 0.00 32.14 2.29
2818 3237 7.266922 ACGATTAGCTACTTTTGTGGAAAAA 57.733 32.000 0.00 0.00 32.14 1.94
2836 3255 2.943843 AAAAGAAAGCACGTACGAGC 57.056 45.000 27.05 27.05 0.00 5.03
2837 3256 1.860676 AAAGAAAGCACGTACGAGCA 58.139 45.000 33.40 0.00 34.21 4.26
2838 3257 2.080286 AAGAAAGCACGTACGAGCAT 57.920 45.000 33.40 22.84 34.21 3.79
2839 3258 1.630148 AGAAAGCACGTACGAGCATC 58.370 50.000 33.40 28.68 34.21 3.91
2840 3259 1.202582 AGAAAGCACGTACGAGCATCT 59.797 47.619 33.40 30.03 34.21 2.90
2841 3260 2.422479 AGAAAGCACGTACGAGCATCTA 59.578 45.455 33.40 0.00 32.20 1.98
2842 3261 2.476873 AAGCACGTACGAGCATCTAG 57.523 50.000 33.40 9.97 34.21 2.43
2843 3262 1.380524 AGCACGTACGAGCATCTAGT 58.619 50.000 33.40 13.73 34.21 2.57
2844 3263 1.064208 AGCACGTACGAGCATCTAGTG 59.936 52.381 33.40 14.98 34.21 2.74
2854 3273 2.311124 GCATCTAGTGCGGTTACCTT 57.689 50.000 0.00 0.00 45.23 3.50
2855 3274 2.629051 GCATCTAGTGCGGTTACCTTT 58.371 47.619 0.00 0.00 45.23 3.11
2856 3275 2.608090 GCATCTAGTGCGGTTACCTTTC 59.392 50.000 0.00 0.00 45.23 2.62
2857 3276 3.857052 CATCTAGTGCGGTTACCTTTCA 58.143 45.455 0.00 0.00 0.00 2.69
2858 3277 4.442706 CATCTAGTGCGGTTACCTTTCAT 58.557 43.478 0.00 0.00 0.00 2.57
2859 3278 4.119442 TCTAGTGCGGTTACCTTTCATC 57.881 45.455 0.00 0.00 0.00 2.92
2860 3279 1.722011 AGTGCGGTTACCTTTCATCG 58.278 50.000 0.00 0.00 0.00 3.84
2861 3280 1.001633 AGTGCGGTTACCTTTCATCGT 59.998 47.619 0.00 0.00 0.00 3.73
2862 3281 1.802365 GTGCGGTTACCTTTCATCGTT 59.198 47.619 0.00 0.00 0.00 3.85
2863 3282 2.224784 GTGCGGTTACCTTTCATCGTTT 59.775 45.455 0.00 0.00 0.00 3.60
2864 3283 2.224549 TGCGGTTACCTTTCATCGTTTG 59.775 45.455 0.00 0.00 0.00 2.93
2865 3284 2.481185 GCGGTTACCTTTCATCGTTTGA 59.519 45.455 0.00 0.00 0.00 2.69
2866 3285 3.424433 GCGGTTACCTTTCATCGTTTGAG 60.424 47.826 0.00 0.00 35.27 3.02
2867 3286 3.991773 CGGTTACCTTTCATCGTTTGAGA 59.008 43.478 0.00 0.00 35.27 3.27
2868 3287 4.630069 CGGTTACCTTTCATCGTTTGAGAT 59.370 41.667 0.00 0.00 35.27 2.75
2869 3288 5.121768 CGGTTACCTTTCATCGTTTGAGATT 59.878 40.000 0.00 0.00 35.27 2.40
2870 3289 6.314784 GGTTACCTTTCATCGTTTGAGATTG 58.685 40.000 0.00 0.00 35.27 2.67
2871 3290 6.314784 GTTACCTTTCATCGTTTGAGATTGG 58.685 40.000 0.00 0.00 35.27 3.16
2872 3291 4.651778 ACCTTTCATCGTTTGAGATTGGA 58.348 39.130 0.00 0.00 35.27 3.53
2873 3292 5.256474 ACCTTTCATCGTTTGAGATTGGAT 58.744 37.500 0.00 0.00 35.27 3.41
2874 3293 5.355350 ACCTTTCATCGTTTGAGATTGGATC 59.645 40.000 0.00 0.00 35.27 3.36
2875 3294 5.469373 TTTCATCGTTTGAGATTGGATCG 57.531 39.130 0.00 0.00 35.27 3.69
2876 3295 3.457234 TCATCGTTTGAGATTGGATCGG 58.543 45.455 0.00 0.00 0.00 4.18
2877 3296 3.118775 TCATCGTTTGAGATTGGATCGGT 60.119 43.478 0.00 0.00 0.00 4.69
2878 3297 2.888594 TCGTTTGAGATTGGATCGGTC 58.111 47.619 0.00 0.00 0.00 4.79
2879 3298 2.232696 TCGTTTGAGATTGGATCGGTCA 59.767 45.455 0.00 0.00 0.00 4.02
2880 3299 3.000041 CGTTTGAGATTGGATCGGTCAA 59.000 45.455 0.00 0.00 0.00 3.18
2881 3300 3.181520 CGTTTGAGATTGGATCGGTCAAC 60.182 47.826 0.00 0.00 0.00 3.18
2882 3301 3.694043 TTGAGATTGGATCGGTCAACA 57.306 42.857 0.00 0.00 0.00 3.33
2883 3302 3.694043 TGAGATTGGATCGGTCAACAA 57.306 42.857 0.00 0.00 0.00 2.83
2884 3303 4.014569 TGAGATTGGATCGGTCAACAAA 57.985 40.909 0.00 0.00 0.00 2.83
2885 3304 4.002982 TGAGATTGGATCGGTCAACAAAG 58.997 43.478 0.00 0.00 0.00 2.77
2886 3305 4.253685 GAGATTGGATCGGTCAACAAAGA 58.746 43.478 0.00 0.00 0.00 2.52
2887 3306 4.256920 AGATTGGATCGGTCAACAAAGAG 58.743 43.478 0.00 0.00 0.00 2.85
2888 3307 3.485463 TTGGATCGGTCAACAAAGAGT 57.515 42.857 0.00 0.00 0.00 3.24
2889 3308 2.766313 TGGATCGGTCAACAAAGAGTG 58.234 47.619 0.00 0.00 0.00 3.51
2890 3309 2.076863 GGATCGGTCAACAAAGAGTGG 58.923 52.381 0.00 0.00 0.00 4.00
2891 3310 2.076863 GATCGGTCAACAAAGAGTGGG 58.923 52.381 0.00 0.00 0.00 4.61
2892 3311 1.124780 TCGGTCAACAAAGAGTGGGA 58.875 50.000 0.00 0.00 0.00 4.37
2893 3312 1.202604 TCGGTCAACAAAGAGTGGGAC 60.203 52.381 0.00 0.00 35.84 4.46
2894 3313 1.474320 CGGTCAACAAAGAGTGGGACA 60.474 52.381 0.00 0.00 37.38 4.02
2895 3314 2.650322 GGTCAACAAAGAGTGGGACAA 58.350 47.619 0.00 0.00 44.16 3.18
2896 3315 3.020984 GGTCAACAAAGAGTGGGACAAA 58.979 45.455 0.00 0.00 44.16 2.83
2897 3316 3.066760 GGTCAACAAAGAGTGGGACAAAG 59.933 47.826 0.00 0.00 44.16 2.77
2898 3317 3.066760 GTCAACAAAGAGTGGGACAAAGG 59.933 47.826 0.00 0.00 44.16 3.11
2899 3318 3.053991 TCAACAAAGAGTGGGACAAAGGA 60.054 43.478 0.00 0.00 44.16 3.36
2900 3319 3.214696 ACAAAGAGTGGGACAAAGGAG 57.785 47.619 0.00 0.00 44.16 3.69
2901 3320 2.777692 ACAAAGAGTGGGACAAAGGAGA 59.222 45.455 0.00 0.00 44.16 3.71
2902 3321 3.395941 ACAAAGAGTGGGACAAAGGAGAT 59.604 43.478 0.00 0.00 44.16 2.75
2903 3322 3.990959 AAGAGTGGGACAAAGGAGATC 57.009 47.619 0.00 0.00 44.16 2.75
2904 3323 1.827969 AGAGTGGGACAAAGGAGATCG 59.172 52.381 0.00 0.00 44.16 3.69
2905 3324 1.550976 GAGTGGGACAAAGGAGATCGT 59.449 52.381 0.00 0.00 44.16 3.73
2906 3325 1.276421 AGTGGGACAAAGGAGATCGTG 59.724 52.381 0.00 0.00 44.16 4.35
2907 3326 0.036388 TGGGACAAAGGAGATCGTGC 60.036 55.000 0.00 0.00 31.92 5.34
2908 3327 0.036388 GGGACAAAGGAGATCGTGCA 60.036 55.000 0.00 0.00 0.00 4.57
2909 3328 1.407437 GGGACAAAGGAGATCGTGCAT 60.407 52.381 0.00 0.00 0.00 3.96
2910 3329 1.667724 GGACAAAGGAGATCGTGCATG 59.332 52.381 0.00 0.00 0.00 4.06
2911 3330 1.063174 GACAAAGGAGATCGTGCATGC 59.937 52.381 11.82 11.82 0.00 4.06
2912 3331 1.339438 ACAAAGGAGATCGTGCATGCT 60.339 47.619 20.33 0.00 0.00 3.79
2913 3332 1.329906 CAAAGGAGATCGTGCATGCTC 59.670 52.381 20.33 14.84 0.00 4.26
2914 3333 0.179062 AAGGAGATCGTGCATGCTCC 60.179 55.000 20.33 19.58 45.70 4.70
2915 3334 1.144716 GGAGATCGTGCATGCTCCA 59.855 57.895 20.33 4.06 44.91 3.86
2916 3335 1.156645 GGAGATCGTGCATGCTCCAC 61.157 60.000 20.33 7.96 44.91 4.02
2917 3336 1.153289 AGATCGTGCATGCTCCACC 60.153 57.895 20.33 5.59 0.00 4.61
2918 3337 2.512286 ATCGTGCATGCTCCACCG 60.512 61.111 20.33 12.70 0.00 4.94
2919 3338 3.315142 ATCGTGCATGCTCCACCGT 62.315 57.895 20.33 0.00 0.00 4.83
2920 3339 2.803155 ATCGTGCATGCTCCACCGTT 62.803 55.000 20.33 5.77 0.00 4.44
2921 3340 2.616330 CGTGCATGCTCCACCGTTT 61.616 57.895 20.33 0.00 0.00 3.60
2922 3341 1.659794 GTGCATGCTCCACCGTTTT 59.340 52.632 20.33 0.00 0.00 2.43
2923 3342 0.387239 GTGCATGCTCCACCGTTTTC 60.387 55.000 20.33 0.00 0.00 2.29
2924 3343 0.537143 TGCATGCTCCACCGTTTTCT 60.537 50.000 20.33 0.00 0.00 2.52
2925 3344 0.598065 GCATGCTCCACCGTTTTCTT 59.402 50.000 11.37 0.00 0.00 2.52
2926 3345 1.000274 GCATGCTCCACCGTTTTCTTT 60.000 47.619 11.37 0.00 0.00 2.52
2927 3346 2.922335 GCATGCTCCACCGTTTTCTTTC 60.922 50.000 11.37 0.00 0.00 2.62
2928 3347 2.045561 TGCTCCACCGTTTTCTTTCA 57.954 45.000 0.00 0.00 0.00 2.69
2929 3348 1.946768 TGCTCCACCGTTTTCTTTCAG 59.053 47.619 0.00 0.00 0.00 3.02
2930 3349 1.947456 GCTCCACCGTTTTCTTTCAGT 59.053 47.619 0.00 0.00 0.00 3.41
2931 3350 2.357952 GCTCCACCGTTTTCTTTCAGTT 59.642 45.455 0.00 0.00 0.00 3.16
2932 3351 3.562557 GCTCCACCGTTTTCTTTCAGTTA 59.437 43.478 0.00 0.00 0.00 2.24
2933 3352 4.554134 GCTCCACCGTTTTCTTTCAGTTAC 60.554 45.833 0.00 0.00 0.00 2.50
2934 3353 3.878699 TCCACCGTTTTCTTTCAGTTACC 59.121 43.478 0.00 0.00 0.00 2.85
2935 3354 3.881089 CCACCGTTTTCTTTCAGTTACCT 59.119 43.478 0.00 0.00 0.00 3.08
2936 3355 4.024302 CCACCGTTTTCTTTCAGTTACCTC 60.024 45.833 0.00 0.00 0.00 3.85
2937 3356 4.814771 CACCGTTTTCTTTCAGTTACCTCT 59.185 41.667 0.00 0.00 0.00 3.69
2938 3357 4.814771 ACCGTTTTCTTTCAGTTACCTCTG 59.185 41.667 0.00 0.00 36.85 3.35
2939 3358 4.814771 CCGTTTTCTTTCAGTTACCTCTGT 59.185 41.667 0.00 0.00 36.85 3.41
2940 3359 5.277345 CCGTTTTCTTTCAGTTACCTCTGTG 60.277 44.000 0.00 0.00 36.85 3.66
2941 3360 5.511571 GTTTTCTTTCAGTTACCTCTGTGC 58.488 41.667 0.00 0.00 36.85 4.57
2942 3361 3.026630 TCTTTCAGTTACCTCTGTGCG 57.973 47.619 0.00 0.00 36.85 5.34
2943 3362 2.626266 TCTTTCAGTTACCTCTGTGCGA 59.374 45.455 0.00 0.00 36.85 5.10
2944 3363 3.258372 TCTTTCAGTTACCTCTGTGCGAT 59.742 43.478 0.00 0.00 36.85 4.58
2945 3364 2.654749 TCAGTTACCTCTGTGCGATG 57.345 50.000 0.00 0.00 36.85 3.84
2946 3365 1.204704 TCAGTTACCTCTGTGCGATGG 59.795 52.381 0.00 0.00 36.85 3.51
2947 3366 0.108138 AGTTACCTCTGTGCGATGGC 60.108 55.000 0.00 0.00 40.52 4.40
2948 3367 0.108138 GTTACCTCTGTGCGATGGCT 60.108 55.000 0.15 0.00 40.82 4.75
2949 3368 0.175760 TTACCTCTGTGCGATGGCTC 59.824 55.000 0.15 0.00 40.82 4.70
2950 3369 0.970427 TACCTCTGTGCGATGGCTCA 60.970 55.000 0.15 2.51 40.10 4.26
2951 3370 1.812922 CCTCTGTGCGATGGCTCAC 60.813 63.158 0.15 0.00 37.71 3.51
2952 3371 2.125952 TCTGTGCGATGGCTCACG 60.126 61.111 0.15 0.00 37.71 4.35
2953 3372 2.433145 CTGTGCGATGGCTCACGT 60.433 61.111 0.15 0.00 37.71 4.49
2954 3373 1.153842 CTGTGCGATGGCTCACGTA 60.154 57.895 0.15 0.00 37.71 3.57
2955 3374 0.735978 CTGTGCGATGGCTCACGTAA 60.736 55.000 0.15 0.00 37.71 3.18
2956 3375 0.735978 TGTGCGATGGCTCACGTAAG 60.736 55.000 0.15 0.00 37.71 2.34
2957 3376 0.457853 GTGCGATGGCTCACGTAAGA 60.458 55.000 0.15 0.00 40.82 2.10
2958 3377 0.245266 TGCGATGGCTCACGTAAGAA 59.755 50.000 0.15 0.00 40.82 2.52
2959 3378 1.134818 TGCGATGGCTCACGTAAGAAT 60.135 47.619 0.15 0.00 40.82 2.40
2960 3379 1.523095 GCGATGGCTCACGTAAGAATC 59.477 52.381 0.00 0.00 37.34 2.52
2961 3380 2.809446 CGATGGCTCACGTAAGAATCA 58.191 47.619 0.00 0.00 43.62 2.57
2962 3381 3.186909 CGATGGCTCACGTAAGAATCAA 58.813 45.455 0.00 0.00 43.62 2.57
2963 3382 3.804325 CGATGGCTCACGTAAGAATCAAT 59.196 43.478 0.00 0.00 43.62 2.57
2964 3383 4.318333 CGATGGCTCACGTAAGAATCAATG 60.318 45.833 0.00 0.00 43.62 2.82
2965 3384 3.270027 TGGCTCACGTAAGAATCAATGG 58.730 45.455 0.00 0.00 43.62 3.16
2966 3385 2.614057 GGCTCACGTAAGAATCAATGGG 59.386 50.000 0.00 0.00 43.62 4.00
2967 3386 3.270877 GCTCACGTAAGAATCAATGGGT 58.729 45.455 0.00 0.00 43.62 4.51
2968 3387 3.689649 GCTCACGTAAGAATCAATGGGTT 59.310 43.478 0.00 0.00 43.62 4.11
2969 3388 4.873827 GCTCACGTAAGAATCAATGGGTTA 59.126 41.667 0.00 0.00 43.62 2.85
2970 3389 5.353123 GCTCACGTAAGAATCAATGGGTTAA 59.647 40.000 0.00 0.00 43.62 2.01
2971 3390 6.038271 GCTCACGTAAGAATCAATGGGTTAAT 59.962 38.462 0.00 0.00 43.62 1.40
2972 3391 7.415206 GCTCACGTAAGAATCAATGGGTTAATT 60.415 37.037 0.00 0.00 43.62 1.40
2973 3392 8.343168 TCACGTAAGAATCAATGGGTTAATTT 57.657 30.769 0.00 0.00 43.62 1.82
2974 3393 8.798402 TCACGTAAGAATCAATGGGTTAATTTT 58.202 29.630 0.00 0.00 43.62 1.82
2975 3394 9.072294 CACGTAAGAATCAATGGGTTAATTTTC 57.928 33.333 0.00 0.00 43.62 2.29
2976 3395 7.966204 ACGTAAGAATCAATGGGTTAATTTTCG 59.034 33.333 0.00 0.00 43.62 3.46
2977 3396 7.966204 CGTAAGAATCAATGGGTTAATTTTCGT 59.034 33.333 0.00 0.00 43.02 3.85
2978 3397 9.072294 GTAAGAATCAATGGGTTAATTTTCGTG 57.928 33.333 0.00 0.00 0.00 4.35
2979 3398 6.099341 AGAATCAATGGGTTAATTTTCGTGC 58.901 36.000 0.00 0.00 0.00 5.34
2980 3399 5.659440 ATCAATGGGTTAATTTTCGTGCT 57.341 34.783 0.00 0.00 0.00 4.40
2981 3400 6.767524 ATCAATGGGTTAATTTTCGTGCTA 57.232 33.333 0.00 0.00 0.00 3.49
2982 3401 6.576662 TCAATGGGTTAATTTTCGTGCTAA 57.423 33.333 0.00 0.00 0.00 3.09
2983 3402 7.164230 TCAATGGGTTAATTTTCGTGCTAAT 57.836 32.000 0.00 0.00 0.00 1.73
2984 3403 8.282455 TCAATGGGTTAATTTTCGTGCTAATA 57.718 30.769 0.00 0.00 0.00 0.98
2985 3404 8.185505 TCAATGGGTTAATTTTCGTGCTAATAC 58.814 33.333 0.00 0.00 0.00 1.89
2986 3405 6.439675 TGGGTTAATTTTCGTGCTAATACC 57.560 37.500 0.00 0.00 0.00 2.73
2987 3406 6.181908 TGGGTTAATTTTCGTGCTAATACCT 58.818 36.000 0.00 0.00 0.00 3.08
2988 3407 7.337167 TGGGTTAATTTTCGTGCTAATACCTA 58.663 34.615 0.00 0.00 0.00 3.08
2989 3408 7.828223 TGGGTTAATTTTCGTGCTAATACCTAA 59.172 33.333 0.00 0.00 0.00 2.69
2990 3409 8.843262 GGGTTAATTTTCGTGCTAATACCTAAT 58.157 33.333 0.00 0.00 0.00 1.73
2994 3413 6.515043 TTTTCGTGCTAATACCTAATACGC 57.485 37.500 0.00 0.00 0.00 4.42
2995 3414 4.164822 TCGTGCTAATACCTAATACGCC 57.835 45.455 0.00 0.00 0.00 5.68
2996 3415 3.057315 TCGTGCTAATACCTAATACGCCC 60.057 47.826 0.00 0.00 0.00 6.13
2997 3416 3.305539 CGTGCTAATACCTAATACGCCCA 60.306 47.826 0.00 0.00 0.00 5.36
2998 3417 4.634199 GTGCTAATACCTAATACGCCCAA 58.366 43.478 0.00 0.00 0.00 4.12
2999 3418 4.450080 GTGCTAATACCTAATACGCCCAAC 59.550 45.833 0.00 0.00 0.00 3.77
3000 3419 4.101274 TGCTAATACCTAATACGCCCAACA 59.899 41.667 0.00 0.00 0.00 3.33
3001 3420 5.221762 TGCTAATACCTAATACGCCCAACAT 60.222 40.000 0.00 0.00 0.00 2.71
3002 3421 5.704053 GCTAATACCTAATACGCCCAACATT 59.296 40.000 0.00 0.00 0.00 2.71
3003 3422 6.206048 GCTAATACCTAATACGCCCAACATTT 59.794 38.462 0.00 0.00 0.00 2.32
3004 3423 7.255346 GCTAATACCTAATACGCCCAACATTTT 60.255 37.037 0.00 0.00 0.00 1.82
3005 3424 4.712122 ACCTAATACGCCCAACATTTTG 57.288 40.909 0.00 0.00 0.00 2.44
3006 3425 4.337145 ACCTAATACGCCCAACATTTTGA 58.663 39.130 0.00 0.00 34.24 2.69
3007 3426 4.398044 ACCTAATACGCCCAACATTTTGAG 59.602 41.667 0.00 0.00 34.24 3.02
3008 3427 4.638421 CCTAATACGCCCAACATTTTGAGA 59.362 41.667 0.00 0.00 34.24 3.27
3009 3428 5.124776 CCTAATACGCCCAACATTTTGAGAA 59.875 40.000 0.00 0.00 34.24 2.87
3010 3429 4.701956 ATACGCCCAACATTTTGAGAAG 57.298 40.909 0.00 0.00 34.24 2.85
3014 3433 2.232208 GCCCAACATTTTGAGAAGGAGG 59.768 50.000 0.00 0.00 34.24 4.30
3019 3438 4.026356 ACATTTTGAGAAGGAGGGAGTG 57.974 45.455 0.00 0.00 0.00 3.51
3029 3448 3.121929 AGGAGGGAGTGATACACATGT 57.878 47.619 0.00 0.00 36.74 3.21
3109 3532 0.323629 TAAGAACCCCTGGCAGAACG 59.676 55.000 17.94 4.95 0.00 3.95
3113 3536 3.136123 CCCCTGGCAGAACGCATG 61.136 66.667 17.94 0.00 45.17 4.06
3116 3539 1.651240 CCCTGGCAGAACGCATGAAG 61.651 60.000 17.94 0.00 45.17 3.02
3197 3620 5.923204 ACCTCTACATAATCTTCTTGCTGG 58.077 41.667 0.00 0.00 0.00 4.85
3221 3644 9.679661 TGGTTTAGAGTCTGAAATATTTGCATA 57.320 29.630 5.17 0.00 0.00 3.14
3362 3786 5.289434 GCTTTTAACTATGTGAAATGCTGGC 59.711 40.000 9.69 0.00 35.48 4.85
3465 3889 1.689984 TTCAGGTGCATGCTTGTTCA 58.310 45.000 20.33 0.00 0.00 3.18
3474 3898 2.555757 GCATGCTTGTTCAGTTCTTCCT 59.444 45.455 11.37 0.00 0.00 3.36
3494 3918 2.552599 TTTTGCCACCTCATCGTACA 57.447 45.000 0.00 0.00 0.00 2.90
3539 3963 7.865889 CCCCTTTCACAGTTTAAATGACTAAAC 59.134 37.037 0.00 0.00 40.56 2.01
3587 4011 3.376546 GGAAGATGTGAAGGAGATGCAAC 59.623 47.826 0.00 0.00 0.00 4.17
3589 4013 1.667724 GATGTGAAGGAGATGCAACGG 59.332 52.381 0.00 0.00 0.00 4.44
3599 4023 2.747446 GAGATGCAACGGTGGTATGTTT 59.253 45.455 0.90 0.00 0.00 2.83
3703 4127 7.012704 ACCATATCTATGTCAATTGTGAAGTGC 59.987 37.037 5.13 0.00 34.87 4.40
3747 4171 3.689161 TCCATTTGCATGTACTGTGTAGC 59.311 43.478 0.00 0.00 0.00 3.58
3781 4205 6.971527 TTCTGTTGAAGTTGTTTTCTACGA 57.028 33.333 0.00 0.00 36.17 3.43
3784 4208 6.537301 TCTGTTGAAGTTGTTTTCTACGACAT 59.463 34.615 0.00 0.00 42.68 3.06
3785 4209 7.065324 TCTGTTGAAGTTGTTTTCTACGACATT 59.935 33.333 0.00 0.00 42.68 2.71
3786 4210 6.964370 TGTTGAAGTTGTTTTCTACGACATTG 59.036 34.615 0.00 0.00 42.68 2.82
3787 4211 6.671614 TGAAGTTGTTTTCTACGACATTGT 57.328 33.333 0.00 0.00 42.68 2.71
3788 4212 6.711579 TGAAGTTGTTTTCTACGACATTGTC 58.288 36.000 6.73 6.73 42.68 3.18
3789 4213 6.314152 TGAAGTTGTTTTCTACGACATTGTCA 59.686 34.615 16.61 0.00 42.68 3.58
3790 4214 6.861065 AGTTGTTTTCTACGACATTGTCAT 57.139 33.333 16.61 4.01 42.68 3.06
3791 4215 7.259290 AGTTGTTTTCTACGACATTGTCATT 57.741 32.000 16.61 5.51 42.68 2.57
3792 4216 8.373048 AGTTGTTTTCTACGACATTGTCATTA 57.627 30.769 16.61 6.33 42.68 1.90
3793 4217 8.999431 AGTTGTTTTCTACGACATTGTCATTAT 58.001 29.630 16.61 2.02 42.68 1.28
3794 4218 9.051027 GTTGTTTTCTACGACATTGTCATTATG 57.949 33.333 16.61 2.74 40.36 1.90
3820 4244 6.051074 TGTCATTATGTTCTGACTAGGCATG 58.949 40.000 0.00 0.00 41.83 4.06
3828 4252 3.338249 TCTGACTAGGCATGTTTTCAGC 58.662 45.455 0.00 0.00 32.24 4.26
3909 4333 5.813513 AGTCCTCATTTTCTTTGCCATTT 57.186 34.783 0.00 0.00 0.00 2.32
3927 4351 7.440198 TGCCATTTTCATCATGTTTTGACTTA 58.560 30.769 0.00 0.00 37.11 2.24
3962 4386 4.240096 CTGAGGATTTGTTGGCAAACATC 58.760 43.478 7.67 3.11 45.54 3.06
4051 4475 4.019174 CTGGCCAAATTTATGACTCTGGT 58.981 43.478 7.01 0.00 0.00 4.00
4064 4488 3.138283 TGACTCTGGTCCAGTGGATTTTT 59.862 43.478 21.95 3.03 41.47 1.94
4109 4533 3.191162 TCTTCAAAATCCTGTGATTGGCG 59.809 43.478 0.00 0.00 40.34 5.69
4115 4539 0.674581 TCCTGTGATTGGCGCTTCAG 60.675 55.000 7.64 7.14 0.00 3.02
4154 4578 1.620323 GTTCCTTGATGGCAAAGGCTT 59.380 47.619 12.26 0.00 40.87 4.35
4269 4693 4.496175 GGTTTGCCTTTGTGATTTTTGCAG 60.496 41.667 0.00 0.00 0.00 4.41
4405 4837 3.423154 GCCAGGCGTTTGGTCGAG 61.423 66.667 0.00 0.00 40.49 4.04
4451 4883 1.842562 AGTGGAGTGATTCCCCTCATG 59.157 52.381 0.00 0.00 46.19 3.07
4667 5102 6.827641 TGAAAACAACTTCATGTCTATACGC 58.172 36.000 0.00 0.00 30.31 4.42
4675 5110 5.828859 ACTTCATGTCTATACGCTTAGGTCT 59.171 40.000 0.00 0.00 0.00 3.85
4865 5383 7.551585 AGGGCGAATACAATATTATCTCAGAG 58.448 38.462 0.00 0.00 0.00 3.35
4970 5495 6.809689 GTCATCATTGCAGATTTCATTCACAA 59.190 34.615 0.00 0.00 0.00 3.33
4977 5502 6.289834 TGCAGATTTCATTCACAACCAATTT 58.710 32.000 0.00 0.00 0.00 1.82
5129 5659 3.057174 GGGATCAGGAGTACAAGATAGCG 60.057 52.174 0.00 0.00 0.00 4.26
5354 5884 7.765695 AATTATGTTTGATGTCTGTGTTCCT 57.234 32.000 0.00 0.00 0.00 3.36
5396 5926 0.836606 TCAAGCCAACAGTGTCTCCA 59.163 50.000 0.00 0.00 0.00 3.86
5550 6081 6.765989 TGTTAAATACCGATTATGAGCAAGCT 59.234 34.615 0.00 0.00 0.00 3.74
5919 6451 7.801716 TCATTATTAATGTGCTCTTGGTACC 57.198 36.000 14.48 4.43 39.87 3.34
6063 6596 4.691216 GCACTTCCGTATCTCTTTTGTCTT 59.309 41.667 0.00 0.00 0.00 3.01
6066 6599 7.291567 CACTTCCGTATCTCTTTTGTCTTTTC 58.708 38.462 0.00 0.00 0.00 2.29
6068 6601 6.780706 TCCGTATCTCTTTTGTCTTTTCAC 57.219 37.500 0.00 0.00 0.00 3.18
6091 6624 8.820933 TCACGACATGATCTTGAAGATAATTTC 58.179 33.333 15.03 8.01 34.53 2.17
6136 6674 0.976641 ATTCGGTCCTTGCTCACTCA 59.023 50.000 0.00 0.00 0.00 3.41
6140 6678 1.734465 CGGTCCTTGCTCACTCATTTC 59.266 52.381 0.00 0.00 0.00 2.17
6151 6689 5.126869 TGCTCACTCATTTCTTTGTTGGAAA 59.873 36.000 0.00 0.00 37.15 3.13
6170 6708 5.592282 TGGAAAGGCTAAATTATTCGATGCA 59.408 36.000 0.00 0.00 0.00 3.96
6356 6895 2.614057 CCGAGTTTCCAATGGAGTATGC 59.386 50.000 0.86 0.00 31.21 3.14
6379 6918 5.300286 GCCAGGTACCGTATCTACTTTAGAA 59.700 44.000 6.18 0.00 38.50 2.10
6456 6995 3.569701 CCTTTTTGACTTAGCTGCTTGGA 59.430 43.478 7.79 0.00 0.00 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 42 6.632909 TGTTTCAGAAAATAGATTGCCATGG 58.367 36.000 7.63 7.63 0.00 3.66
81 392 9.848172 GCAAACATACAAATTTAGAACACTTTG 57.152 29.630 0.00 0.00 35.30 2.77
107 418 7.717436 GGAAGAGATAAAATGTTAAGGGAGGAG 59.283 40.741 0.00 0.00 0.00 3.69
108 419 7.183839 TGGAAGAGATAAAATGTTAAGGGAGGA 59.816 37.037 0.00 0.00 0.00 3.71
112 423 8.416329 CCAATGGAAGAGATAAAATGTTAAGGG 58.584 37.037 0.00 0.00 0.00 3.95
113 424 8.971073 ACCAATGGAAGAGATAAAATGTTAAGG 58.029 33.333 6.16 0.00 0.00 2.69
129 440 7.062957 ACATATTAAAGAGGGACCAATGGAAG 58.937 38.462 6.16 0.00 0.00 3.46
149 460 2.104281 GGGACGGAGCCAGTAAACATAT 59.896 50.000 0.00 0.00 0.00 1.78
154 465 0.543410 TCAGGGACGGAGCCAGTAAA 60.543 55.000 0.00 0.00 0.00 2.01
157 468 2.039624 ATCAGGGACGGAGCCAGT 59.960 61.111 0.00 0.00 35.10 4.00
158 469 1.406065 ATGATCAGGGACGGAGCCAG 61.406 60.000 0.09 0.00 38.36 4.85
178 489 1.150536 GTTGGCCTTGGAGGTGTCA 59.849 57.895 3.32 0.00 37.80 3.58
180 491 1.456287 GAGTTGGCCTTGGAGGTGT 59.544 57.895 3.32 0.00 37.80 4.16
189 500 1.168714 GAAAATGAGCGAGTTGGCCT 58.831 50.000 3.32 0.00 0.00 5.19
194 505 5.758296 TGTAGTTGAAGAAAATGAGCGAGTT 59.242 36.000 0.00 0.00 0.00 3.01
201 512 7.094634 GGATCTGCTTGTAGTTGAAGAAAATGA 60.095 37.037 0.00 0.00 0.00 2.57
238 549 8.981659 TGAGAATCAAGGTAGATATTCTTGTCA 58.018 33.333 0.00 0.00 45.97 3.58
258 569 3.006323 GTCGTCTAGGCATGGATGAGAAT 59.994 47.826 6.91 0.00 33.10 2.40
277 588 4.069304 TGAGTCAAATTAAGGGTTGGTCG 58.931 43.478 0.00 0.00 0.00 4.79
280 591 7.173047 CCATTTTTGAGTCAAATTAAGGGTTGG 59.827 37.037 18.69 11.22 33.19 3.77
339 650 9.367444 GCCGCTATAATTACTCTATTATGTGTT 57.633 33.333 0.00 0.00 33.78 3.32
356 667 1.341913 TGGAGCCAAGGCCGCTATAA 61.342 55.000 7.62 0.00 43.17 0.98
381 747 4.162320 ACATGAATCGGTCAACTACATCCT 59.838 41.667 0.00 0.00 40.50 3.24
412 778 4.683781 GCATTGCAACGAAAGAAAATGGTA 59.316 37.500 0.00 0.00 0.00 3.25
414 780 3.493877 TGCATTGCAACGAAAGAAAATGG 59.506 39.130 9.33 0.00 34.76 3.16
433 800 2.691011 TGCTAGTACATATGTCCGTGCA 59.309 45.455 12.68 15.45 0.00 4.57
475 842 9.688592 GGGCTATATTTTCAGAGATTTTTCATG 57.311 33.333 0.00 0.00 0.00 3.07
477 844 7.287696 GGGGGCTATATTTTCAGAGATTTTTCA 59.712 37.037 0.00 0.00 0.00 2.69
488 855 3.181423 GGGTCATGGGGGCTATATTTTCA 60.181 47.826 0.00 0.00 0.00 2.69
507 874 1.229177 GGGCCTGTTTGAATGGGGT 60.229 57.895 0.84 0.00 0.00 4.95
691 1066 1.730064 GGTTTCTCGTCAGCGCATTTA 59.270 47.619 11.47 0.00 38.14 1.40
695 1070 2.357034 GGGTTTCTCGTCAGCGCA 60.357 61.111 11.47 0.00 38.14 6.09
768 1144 9.463443 CGGATTTGTTTATTTCTTTCTTTCTGT 57.537 29.630 0.00 0.00 0.00 3.41
771 1147 7.325097 TCGCGGATTTGTTTATTTCTTTCTTTC 59.675 33.333 6.13 0.00 0.00 2.62
839 1220 0.831288 AGAGGGAGATGGAGATGGCG 60.831 60.000 0.00 0.00 0.00 5.69
840 1221 1.347378 GAAGAGGGAGATGGAGATGGC 59.653 57.143 0.00 0.00 0.00 4.40
940 1330 3.843117 GACCTAGGCGGCGAATCGG 62.843 68.421 12.98 7.69 35.61 4.18
1208 1598 0.836400 AAGTGGAAAGGAGCGAGGGA 60.836 55.000 0.00 0.00 0.00 4.20
1210 1600 0.035458 ACAAGTGGAAAGGAGCGAGG 59.965 55.000 0.00 0.00 0.00 4.63
1219 1609 1.824230 AGCACAAGCAACAAGTGGAAA 59.176 42.857 0.00 0.00 45.49 3.13
1221 1611 2.221169 CTAGCACAAGCAACAAGTGGA 58.779 47.619 0.00 0.00 45.49 4.02
1267 1657 2.360350 TTCTACGAGCCCGGACGT 60.360 61.111 20.45 20.45 44.72 4.34
1272 1662 2.202756 GCCACTTCTACGAGCCCG 60.203 66.667 0.00 0.00 42.50 6.13
1319 1711 8.671384 ATTAAACTTAACCGCAGCTATGATTA 57.329 30.769 0.00 0.00 0.00 1.75
1374 1766 2.094762 AAACCTAACCGCAGCTACAG 57.905 50.000 0.00 0.00 0.00 2.74
1410 1802 4.576463 AGCTACGAAATCAATGACCAATCC 59.424 41.667 0.00 0.00 0.00 3.01
1420 1812 1.803334 AACCGCAGCTACGAAATCAA 58.197 45.000 8.21 0.00 34.06 2.57
1464 1859 5.818136 ATGATTCGGGTAGACACAAAATG 57.182 39.130 0.00 0.00 0.00 2.32
1494 1889 4.576873 GCTAAACCTGAAGGATAAAGCCTC 59.423 45.833 2.62 0.00 37.26 4.70
1544 1939 3.063997 CGAACACTGCCCATCAACTAATC 59.936 47.826 0.00 0.00 0.00 1.75
1558 1953 1.618861 GAGTGACCGATCGAACACTG 58.381 55.000 33.71 15.76 42.45 3.66
1612 2007 4.871933 TGCACAGTTACAGAGATTCTCA 57.128 40.909 15.83 0.00 32.06 3.27
1653 2048 3.081061 AGCGACAAGATAAACCATGCAA 58.919 40.909 0.00 0.00 0.00 4.08
1721 2116 1.002684 AGATCGCTAAGACGCTAACCG 60.003 52.381 0.00 0.00 44.21 4.44
1744 2139 2.389715 CCTAACCAAACCCCAAACACA 58.610 47.619 0.00 0.00 0.00 3.72
1829 2224 4.201647 CGCATCCTCAATTGCACAAAAATC 60.202 41.667 0.00 0.00 38.80 2.17
2378 2773 8.723942 TGGAAGAAGAAAAGAATCAGTATAGC 57.276 34.615 0.00 0.00 0.00 2.97
2504 2900 9.938280 AGAGTTGTTAATGCTTACTATACAACA 57.062 29.630 15.03 0.00 43.67 3.33
2564 2960 1.479323 TCTCCGACAAGTATTTCCGGG 59.521 52.381 0.00 0.00 40.48 5.73
2625 3044 5.121380 ACATAGTTACTTACTCCCTCCGA 57.879 43.478 0.00 0.00 38.33 4.55
2649 3068 8.632679 ACATGATCATTGACTAAAACAACAAGT 58.367 29.630 5.16 0.00 0.00 3.16
2674 3093 4.571176 GTGCTGGAGTAGGCTAAATACAAC 59.429 45.833 0.00 0.00 0.00 3.32
2725 3144 7.254084 GCAGAATTTAATACGCCCAAGATTTTG 60.254 37.037 0.00 0.00 0.00 2.44
2726 3145 6.756542 GCAGAATTTAATACGCCCAAGATTTT 59.243 34.615 0.00 0.00 0.00 1.82
2731 3150 4.630894 TGCAGAATTTAATACGCCCAAG 57.369 40.909 0.00 0.00 0.00 3.61
2733 3152 3.243367 GCATGCAGAATTTAATACGCCCA 60.243 43.478 14.21 0.00 0.00 5.36
2734 3153 3.243367 TGCATGCAGAATTTAATACGCCC 60.243 43.478 18.46 0.00 0.00 6.13
2736 3155 6.346040 GGAATTGCATGCAGAATTTAATACGC 60.346 38.462 21.50 5.05 0.00 4.42
2737 3156 6.696583 TGGAATTGCATGCAGAATTTAATACG 59.303 34.615 21.50 0.00 0.00 3.06
2738 3157 8.597662 ATGGAATTGCATGCAGAATTTAATAC 57.402 30.769 21.50 6.37 0.00 1.89
2740 3159 9.787435 ATTATGGAATTGCATGCAGAATTTAAT 57.213 25.926 21.50 14.99 29.82 1.40
2747 3166 7.337689 GTCCTATATTATGGAATTGCATGCAGA 59.662 37.037 21.50 12.42 33.72 4.26
2748 3167 7.478322 GTCCTATATTATGGAATTGCATGCAG 58.522 38.462 21.50 10.65 33.72 4.41
2749 3168 6.093909 CGTCCTATATTATGGAATTGCATGCA 59.906 38.462 18.46 18.46 33.72 3.96
2750 3169 6.489675 CGTCCTATATTATGGAATTGCATGC 58.510 40.000 21.41 11.82 33.72 4.06
2751 3170 6.093909 TGCGTCCTATATTATGGAATTGCATG 59.906 38.462 21.41 4.41 34.55 4.06
2753 3172 5.411361 GTGCGTCCTATATTATGGAATTGCA 59.589 40.000 0.79 0.79 35.98 4.08
2754 3173 5.411361 TGTGCGTCCTATATTATGGAATTGC 59.589 40.000 0.00 0.00 33.72 3.56
2755 3174 6.650807 ACTGTGCGTCCTATATTATGGAATTG 59.349 38.462 0.00 0.00 33.72 2.32
2756 3175 6.769512 ACTGTGCGTCCTATATTATGGAATT 58.230 36.000 0.00 0.00 33.72 2.17
2758 3177 5.801531 ACTGTGCGTCCTATATTATGGAA 57.198 39.130 0.00 0.00 33.72 3.53
2760 3179 6.452242 TGTAACTGTGCGTCCTATATTATGG 58.548 40.000 0.00 0.00 0.00 2.74
2761 3180 6.089551 GCTGTAACTGTGCGTCCTATATTATG 59.910 42.308 0.00 0.00 0.00 1.90
2762 3181 6.157211 GCTGTAACTGTGCGTCCTATATTAT 58.843 40.000 0.00 0.00 0.00 1.28
2763 3182 5.508489 GGCTGTAACTGTGCGTCCTATATTA 60.508 44.000 0.00 0.00 0.00 0.98
2764 3183 4.369182 GCTGTAACTGTGCGTCCTATATT 58.631 43.478 0.00 0.00 0.00 1.28
2766 3185 2.100252 GGCTGTAACTGTGCGTCCTATA 59.900 50.000 0.00 0.00 0.00 1.31
2768 3187 0.245539 GGCTGTAACTGTGCGTCCTA 59.754 55.000 0.00 0.00 0.00 2.94
2769 3188 1.004918 GGCTGTAACTGTGCGTCCT 60.005 57.895 0.00 0.00 0.00 3.85
2770 3189 1.004918 AGGCTGTAACTGTGCGTCC 60.005 57.895 0.00 0.00 0.00 4.79
2771 3190 0.319555 TGAGGCTGTAACTGTGCGTC 60.320 55.000 0.00 0.00 40.59 5.19
2772 3191 0.600255 GTGAGGCTGTAACTGTGCGT 60.600 55.000 0.00 0.00 0.00 5.24
2773 3192 1.291877 GGTGAGGCTGTAACTGTGCG 61.292 60.000 0.00 0.00 0.00 5.34
2774 3193 0.250295 TGGTGAGGCTGTAACTGTGC 60.250 55.000 0.00 0.00 0.00 4.57
2775 3194 1.873591 GTTGGTGAGGCTGTAACTGTG 59.126 52.381 0.00 0.00 0.00 3.66
2776 3195 1.540363 CGTTGGTGAGGCTGTAACTGT 60.540 52.381 0.00 0.00 0.00 3.55
2777 3196 1.148310 CGTTGGTGAGGCTGTAACTG 58.852 55.000 0.00 0.00 0.00 3.16
2778 3197 1.045407 TCGTTGGTGAGGCTGTAACT 58.955 50.000 0.00 0.00 0.00 2.24
2779 3198 2.094762 ATCGTTGGTGAGGCTGTAAC 57.905 50.000 0.00 0.00 0.00 2.50
2781 3200 2.418197 GCTAATCGTTGGTGAGGCTGTA 60.418 50.000 0.00 0.00 0.00 2.74
2782 3201 1.676014 GCTAATCGTTGGTGAGGCTGT 60.676 52.381 0.00 0.00 0.00 4.40
2783 3202 1.009829 GCTAATCGTTGGTGAGGCTG 58.990 55.000 0.00 0.00 0.00 4.85
2784 3203 0.905357 AGCTAATCGTTGGTGAGGCT 59.095 50.000 0.00 0.00 0.00 4.58
2785 3204 2.159085 AGTAGCTAATCGTTGGTGAGGC 60.159 50.000 0.00 0.00 0.00 4.70
2787 3206 5.408604 ACAAAAGTAGCTAATCGTTGGTGAG 59.591 40.000 17.03 0.00 0.00 3.51
2788 3207 5.178623 CACAAAAGTAGCTAATCGTTGGTGA 59.821 40.000 17.03 0.00 31.88 4.02
2789 3208 5.382303 CACAAAAGTAGCTAATCGTTGGTG 58.618 41.667 17.03 9.54 0.00 4.17
2790 3209 4.454504 CCACAAAAGTAGCTAATCGTTGGT 59.545 41.667 17.03 2.23 0.00 3.67
2791 3210 4.693566 TCCACAAAAGTAGCTAATCGTTGG 59.306 41.667 17.03 11.45 0.00 3.77
2792 3211 5.856126 TCCACAAAAGTAGCTAATCGTTG 57.144 39.130 13.18 13.18 0.00 4.10
2793 3212 6.870971 TTTCCACAAAAGTAGCTAATCGTT 57.129 33.333 0.00 0.00 0.00 3.85
2794 3213 6.870971 TTTTCCACAAAAGTAGCTAATCGT 57.129 33.333 0.00 0.00 0.00 3.73
2816 3235 2.610374 TGCTCGTACGTGCTTTCTTTTT 59.390 40.909 33.83 0.00 35.85 1.94
2817 3236 2.206750 TGCTCGTACGTGCTTTCTTTT 58.793 42.857 33.83 0.00 35.85 2.27
2818 3237 1.860676 TGCTCGTACGTGCTTTCTTT 58.139 45.000 33.83 0.00 35.85 2.52
2819 3238 1.993370 GATGCTCGTACGTGCTTTCTT 59.007 47.619 33.83 18.24 35.85 2.52
2820 3239 1.202582 AGATGCTCGTACGTGCTTTCT 59.797 47.619 33.83 30.12 35.85 2.52
2821 3240 1.630148 AGATGCTCGTACGTGCTTTC 58.370 50.000 33.83 28.87 35.85 2.62
2822 3241 2.163815 ACTAGATGCTCGTACGTGCTTT 59.836 45.455 33.83 24.33 35.85 3.51
2823 3242 1.743958 ACTAGATGCTCGTACGTGCTT 59.256 47.619 33.83 29.39 35.85 3.91
2824 3243 1.064208 CACTAGATGCTCGTACGTGCT 59.936 52.381 33.83 22.89 35.85 4.40
2825 3244 1.467875 CACTAGATGCTCGTACGTGC 58.532 55.000 29.76 29.76 35.46 5.34
2836 3255 3.857052 TGAAAGGTAACCGCACTAGATG 58.143 45.455 0.00 0.00 37.17 2.90
2837 3256 4.694339 GATGAAAGGTAACCGCACTAGAT 58.306 43.478 0.00 0.00 37.17 1.98
2838 3257 3.428452 CGATGAAAGGTAACCGCACTAGA 60.428 47.826 0.00 0.00 37.17 2.43
2839 3258 2.858344 CGATGAAAGGTAACCGCACTAG 59.142 50.000 0.00 0.00 37.17 2.57
2840 3259 2.231964 ACGATGAAAGGTAACCGCACTA 59.768 45.455 0.00 0.00 37.17 2.74
2841 3260 1.001633 ACGATGAAAGGTAACCGCACT 59.998 47.619 0.00 0.00 37.17 4.40
2842 3261 1.435577 ACGATGAAAGGTAACCGCAC 58.564 50.000 0.00 0.00 37.17 5.34
2843 3262 2.172851 AACGATGAAAGGTAACCGCA 57.827 45.000 0.00 0.00 37.17 5.69
2844 3263 2.481185 TCAAACGATGAAAGGTAACCGC 59.519 45.455 0.00 0.00 34.30 5.68
2845 3264 3.991773 TCTCAAACGATGAAAGGTAACCG 59.008 43.478 0.00 0.00 37.67 4.44
2846 3265 6.314784 CAATCTCAAACGATGAAAGGTAACC 58.685 40.000 0.00 0.00 37.67 2.85
2847 3266 6.148811 TCCAATCTCAAACGATGAAAGGTAAC 59.851 38.462 0.00 0.00 37.67 2.50
2848 3267 6.234920 TCCAATCTCAAACGATGAAAGGTAA 58.765 36.000 0.00 0.00 37.67 2.85
2849 3268 5.800296 TCCAATCTCAAACGATGAAAGGTA 58.200 37.500 0.00 0.00 37.67 3.08
2850 3269 4.651778 TCCAATCTCAAACGATGAAAGGT 58.348 39.130 0.00 0.00 37.67 3.50
2851 3270 5.503031 CGATCCAATCTCAAACGATGAAAGG 60.503 44.000 0.00 0.00 37.67 3.11
2852 3271 5.496387 CGATCCAATCTCAAACGATGAAAG 58.504 41.667 0.00 0.00 37.67 2.62
2853 3272 4.332543 CCGATCCAATCTCAAACGATGAAA 59.667 41.667 0.00 0.00 37.67 2.69
2854 3273 3.871006 CCGATCCAATCTCAAACGATGAA 59.129 43.478 0.00 0.00 37.67 2.57
2855 3274 3.118775 ACCGATCCAATCTCAAACGATGA 60.119 43.478 0.00 0.00 36.38 2.92
2856 3275 3.198068 ACCGATCCAATCTCAAACGATG 58.802 45.455 0.00 0.00 0.00 3.84
2857 3276 3.118775 TGACCGATCCAATCTCAAACGAT 60.119 43.478 0.00 0.00 0.00 3.73
2858 3277 2.232696 TGACCGATCCAATCTCAAACGA 59.767 45.455 0.00 0.00 0.00 3.85
2859 3278 2.616960 TGACCGATCCAATCTCAAACG 58.383 47.619 0.00 0.00 0.00 3.60
2860 3279 3.751175 TGTTGACCGATCCAATCTCAAAC 59.249 43.478 0.00 0.00 29.03 2.93
2861 3280 4.014569 TGTTGACCGATCCAATCTCAAA 57.985 40.909 0.00 0.00 29.03 2.69
2862 3281 3.694043 TGTTGACCGATCCAATCTCAA 57.306 42.857 0.00 0.00 0.00 3.02
2863 3282 3.694043 TTGTTGACCGATCCAATCTCA 57.306 42.857 0.00 0.00 0.00 3.27
2864 3283 4.253685 TCTTTGTTGACCGATCCAATCTC 58.746 43.478 0.00 0.00 0.00 2.75
2865 3284 4.256920 CTCTTTGTTGACCGATCCAATCT 58.743 43.478 0.00 0.00 0.00 2.40
2866 3285 4.003648 ACTCTTTGTTGACCGATCCAATC 58.996 43.478 0.00 0.00 0.00 2.67
2867 3286 3.753272 CACTCTTTGTTGACCGATCCAAT 59.247 43.478 0.00 0.00 0.00 3.16
2868 3287 3.138304 CACTCTTTGTTGACCGATCCAA 58.862 45.455 0.00 0.00 0.00 3.53
2869 3288 2.549992 CCACTCTTTGTTGACCGATCCA 60.550 50.000 0.00 0.00 0.00 3.41
2870 3289 2.076863 CCACTCTTTGTTGACCGATCC 58.923 52.381 0.00 0.00 0.00 3.36
2871 3290 2.076863 CCCACTCTTTGTTGACCGATC 58.923 52.381 0.00 0.00 0.00 3.69
2872 3291 1.697432 TCCCACTCTTTGTTGACCGAT 59.303 47.619 0.00 0.00 0.00 4.18
2873 3292 1.124780 TCCCACTCTTTGTTGACCGA 58.875 50.000 0.00 0.00 0.00 4.69
2874 3293 1.226746 GTCCCACTCTTTGTTGACCG 58.773 55.000 0.00 0.00 0.00 4.79
2875 3294 2.341846 TGTCCCACTCTTTGTTGACC 57.658 50.000 0.00 0.00 30.80 4.02
2876 3295 3.066760 CCTTTGTCCCACTCTTTGTTGAC 59.933 47.826 0.00 0.00 0.00 3.18
2877 3296 3.053991 TCCTTTGTCCCACTCTTTGTTGA 60.054 43.478 0.00 0.00 0.00 3.18
2878 3297 3.287222 TCCTTTGTCCCACTCTTTGTTG 58.713 45.455 0.00 0.00 0.00 3.33
2879 3298 3.202151 TCTCCTTTGTCCCACTCTTTGTT 59.798 43.478 0.00 0.00 0.00 2.83
2880 3299 2.777692 TCTCCTTTGTCCCACTCTTTGT 59.222 45.455 0.00 0.00 0.00 2.83
2881 3300 3.492102 TCTCCTTTGTCCCACTCTTTG 57.508 47.619 0.00 0.00 0.00 2.77
2882 3301 3.307059 CGATCTCCTTTGTCCCACTCTTT 60.307 47.826 0.00 0.00 0.00 2.52
2883 3302 2.234908 CGATCTCCTTTGTCCCACTCTT 59.765 50.000 0.00 0.00 0.00 2.85
2884 3303 1.827969 CGATCTCCTTTGTCCCACTCT 59.172 52.381 0.00 0.00 0.00 3.24
2885 3304 1.550976 ACGATCTCCTTTGTCCCACTC 59.449 52.381 0.00 0.00 0.00 3.51
2886 3305 1.276421 CACGATCTCCTTTGTCCCACT 59.724 52.381 0.00 0.00 0.00 4.00
2887 3306 1.726853 CACGATCTCCTTTGTCCCAC 58.273 55.000 0.00 0.00 0.00 4.61
2888 3307 0.036388 GCACGATCTCCTTTGTCCCA 60.036 55.000 0.00 0.00 0.00 4.37
2889 3308 0.036388 TGCACGATCTCCTTTGTCCC 60.036 55.000 0.00 0.00 0.00 4.46
2890 3309 1.667724 CATGCACGATCTCCTTTGTCC 59.332 52.381 0.00 0.00 0.00 4.02
2891 3310 1.063174 GCATGCACGATCTCCTTTGTC 59.937 52.381 14.21 0.00 0.00 3.18
2892 3311 1.089920 GCATGCACGATCTCCTTTGT 58.910 50.000 14.21 0.00 0.00 2.83
2893 3312 1.329906 GAGCATGCACGATCTCCTTTG 59.670 52.381 21.98 0.00 0.00 2.77
2894 3313 1.661341 GAGCATGCACGATCTCCTTT 58.339 50.000 21.98 0.00 0.00 3.11
2895 3314 0.179062 GGAGCATGCACGATCTCCTT 60.179 55.000 21.98 0.00 41.35 3.36
2896 3315 1.332889 TGGAGCATGCACGATCTCCT 61.333 55.000 21.98 0.00 44.09 3.69
2897 3316 1.144716 TGGAGCATGCACGATCTCC 59.855 57.895 21.98 16.91 44.04 3.71
2898 3317 4.842292 TGGAGCATGCACGATCTC 57.158 55.556 21.98 7.17 0.00 2.75
2905 3324 0.537143 AGAAAACGGTGGAGCATGCA 60.537 50.000 21.98 0.00 0.00 3.96
2906 3325 0.598065 AAGAAAACGGTGGAGCATGC 59.402 50.000 10.51 10.51 0.00 4.06
2907 3326 2.293122 TGAAAGAAAACGGTGGAGCATG 59.707 45.455 0.00 0.00 0.00 4.06
2908 3327 2.554032 CTGAAAGAAAACGGTGGAGCAT 59.446 45.455 0.00 0.00 34.07 3.79
2909 3328 1.946768 CTGAAAGAAAACGGTGGAGCA 59.053 47.619 0.00 0.00 34.07 4.26
2910 3329 1.947456 ACTGAAAGAAAACGGTGGAGC 59.053 47.619 0.00 0.00 37.43 4.70
2911 3330 4.024302 GGTAACTGAAAGAAAACGGTGGAG 60.024 45.833 0.00 0.00 37.43 3.86
2912 3331 3.878699 GGTAACTGAAAGAAAACGGTGGA 59.121 43.478 0.00 0.00 37.43 4.02
2913 3332 4.219143 GGTAACTGAAAGAAAACGGTGG 57.781 45.455 0.00 0.00 37.43 4.61
2926 3345 4.613358 GCCATCGCACAGAGGTAACTGA 62.613 54.545 0.00 0.00 41.22 3.41
2927 3346 2.335163 GCCATCGCACAGAGGTAACTG 61.335 57.143 0.00 0.00 41.22 3.16
2928 3347 0.108138 GCCATCGCACAGAGGTAACT 60.108 55.000 0.00 0.00 43.37 2.24
2929 3348 0.108138 AGCCATCGCACAGAGGTAAC 60.108 55.000 0.00 0.00 37.52 2.50
2930 3349 0.175760 GAGCCATCGCACAGAGGTAA 59.824 55.000 0.00 0.00 37.52 2.85
2931 3350 0.970427 TGAGCCATCGCACAGAGGTA 60.970 55.000 0.00 0.00 37.52 3.08
2932 3351 2.285773 TGAGCCATCGCACAGAGGT 61.286 57.895 0.00 0.00 37.52 3.85
2933 3352 1.812922 GTGAGCCATCGCACAGAGG 60.813 63.158 0.00 0.00 41.74 3.69
2934 3353 2.163390 CGTGAGCCATCGCACAGAG 61.163 63.158 0.00 0.00 42.15 3.35
2935 3354 1.591504 TACGTGAGCCATCGCACAGA 61.592 55.000 0.00 0.00 42.15 3.41
2936 3355 0.735978 TTACGTGAGCCATCGCACAG 60.736 55.000 0.00 0.00 42.15 3.66
2937 3356 0.735978 CTTACGTGAGCCATCGCACA 60.736 55.000 0.00 0.00 42.15 4.57
2938 3357 0.457853 TCTTACGTGAGCCATCGCAC 60.458 55.000 1.76 0.00 39.25 5.34
2939 3358 0.245266 TTCTTACGTGAGCCATCGCA 59.755 50.000 1.76 0.00 37.52 5.10
2940 3359 1.523095 GATTCTTACGTGAGCCATCGC 59.477 52.381 1.76 0.00 0.00 4.58
2941 3360 2.809446 TGATTCTTACGTGAGCCATCG 58.191 47.619 1.76 0.00 0.00 3.84
2942 3361 4.024556 CCATTGATTCTTACGTGAGCCATC 60.025 45.833 1.76 7.32 0.00 3.51
2943 3362 3.879295 CCATTGATTCTTACGTGAGCCAT 59.121 43.478 1.76 0.00 0.00 4.40
2944 3363 3.270027 CCATTGATTCTTACGTGAGCCA 58.730 45.455 1.76 0.00 0.00 4.75
2945 3364 2.614057 CCCATTGATTCTTACGTGAGCC 59.386 50.000 1.76 0.00 0.00 4.70
2946 3365 3.270877 ACCCATTGATTCTTACGTGAGC 58.729 45.455 1.76 0.00 0.00 4.26
2947 3366 6.978343 TTAACCCATTGATTCTTACGTGAG 57.022 37.500 0.00 0.00 0.00 3.51
2948 3367 7.931578 AATTAACCCATTGATTCTTACGTGA 57.068 32.000 0.00 0.00 0.00 4.35
2949 3368 8.980143 AAAATTAACCCATTGATTCTTACGTG 57.020 30.769 0.00 0.00 0.00 4.49
2950 3369 7.966204 CGAAAATTAACCCATTGATTCTTACGT 59.034 33.333 0.00 0.00 0.00 3.57
2951 3370 7.966204 ACGAAAATTAACCCATTGATTCTTACG 59.034 33.333 0.00 0.00 0.00 3.18
2952 3371 9.072294 CACGAAAATTAACCCATTGATTCTTAC 57.928 33.333 0.00 0.00 0.00 2.34
2953 3372 7.757624 GCACGAAAATTAACCCATTGATTCTTA 59.242 33.333 0.00 0.00 0.00 2.10
2954 3373 6.589907 GCACGAAAATTAACCCATTGATTCTT 59.410 34.615 0.00 0.00 0.00 2.52
2955 3374 6.071391 AGCACGAAAATTAACCCATTGATTCT 60.071 34.615 0.00 0.00 0.00 2.40
2956 3375 6.099341 AGCACGAAAATTAACCCATTGATTC 58.901 36.000 0.00 0.00 0.00 2.52
2957 3376 6.036577 AGCACGAAAATTAACCCATTGATT 57.963 33.333 0.00 0.00 0.00 2.57
2958 3377 5.659440 AGCACGAAAATTAACCCATTGAT 57.341 34.783 0.00 0.00 0.00 2.57
2959 3378 6.576662 TTAGCACGAAAATTAACCCATTGA 57.423 33.333 0.00 0.00 0.00 2.57
2960 3379 7.434013 GGTATTAGCACGAAAATTAACCCATTG 59.566 37.037 0.00 0.00 0.00 2.82
2961 3380 7.340999 AGGTATTAGCACGAAAATTAACCCATT 59.659 33.333 0.00 0.00 0.00 3.16
2962 3381 6.831868 AGGTATTAGCACGAAAATTAACCCAT 59.168 34.615 0.00 0.00 0.00 4.00
2963 3382 6.181908 AGGTATTAGCACGAAAATTAACCCA 58.818 36.000 0.00 0.00 0.00 4.51
2964 3383 6.688637 AGGTATTAGCACGAAAATTAACCC 57.311 37.500 0.00 0.00 0.00 4.11
2968 3387 8.702438 GCGTATTAGGTATTAGCACGAAAATTA 58.298 33.333 7.42 0.00 0.00 1.40
2969 3388 7.307573 GGCGTATTAGGTATTAGCACGAAAATT 60.308 37.037 7.42 0.00 0.00 1.82
2970 3389 6.146673 GGCGTATTAGGTATTAGCACGAAAAT 59.853 38.462 7.42 0.00 0.00 1.82
2971 3390 5.463061 GGCGTATTAGGTATTAGCACGAAAA 59.537 40.000 7.42 0.00 0.00 2.29
2972 3391 4.984161 GGCGTATTAGGTATTAGCACGAAA 59.016 41.667 7.42 0.00 0.00 3.46
2973 3392 4.549458 GGCGTATTAGGTATTAGCACGAA 58.451 43.478 7.42 0.00 0.00 3.85
2974 3393 3.057315 GGGCGTATTAGGTATTAGCACGA 60.057 47.826 7.42 0.00 0.00 4.35
2975 3394 3.248266 GGGCGTATTAGGTATTAGCACG 58.752 50.000 0.00 0.00 0.00 5.34
2976 3395 4.261578 TGGGCGTATTAGGTATTAGCAC 57.738 45.455 0.00 0.00 0.00 4.40
2977 3396 4.101274 TGTTGGGCGTATTAGGTATTAGCA 59.899 41.667 0.00 0.00 0.00 3.49
2978 3397 4.634199 TGTTGGGCGTATTAGGTATTAGC 58.366 43.478 0.00 0.00 0.00 3.09
2979 3398 7.739498 AAATGTTGGGCGTATTAGGTATTAG 57.261 36.000 0.00 0.00 0.00 1.73
2980 3399 7.774157 TCAAAATGTTGGGCGTATTAGGTATTA 59.226 33.333 0.00 0.00 35.29 0.98
2981 3400 6.603997 TCAAAATGTTGGGCGTATTAGGTATT 59.396 34.615 0.00 0.00 35.29 1.89
2982 3401 6.123651 TCAAAATGTTGGGCGTATTAGGTAT 58.876 36.000 0.00 0.00 35.29 2.73
2983 3402 5.498393 TCAAAATGTTGGGCGTATTAGGTA 58.502 37.500 0.00 0.00 35.29 3.08
2984 3403 4.337145 TCAAAATGTTGGGCGTATTAGGT 58.663 39.130 0.00 0.00 35.29 3.08
2985 3404 4.638421 TCTCAAAATGTTGGGCGTATTAGG 59.362 41.667 0.00 0.00 34.95 2.69
2986 3405 5.811399 TCTCAAAATGTTGGGCGTATTAG 57.189 39.130 0.00 0.00 34.95 1.73
2987 3406 5.124776 CCTTCTCAAAATGTTGGGCGTATTA 59.875 40.000 0.00 0.00 34.95 0.98
2988 3407 4.082245 CCTTCTCAAAATGTTGGGCGTATT 60.082 41.667 0.00 0.00 34.95 1.89
2989 3408 3.443681 CCTTCTCAAAATGTTGGGCGTAT 59.556 43.478 0.00 0.00 34.95 3.06
2990 3409 2.817258 CCTTCTCAAAATGTTGGGCGTA 59.183 45.455 0.00 0.00 34.95 4.42
2991 3410 1.613437 CCTTCTCAAAATGTTGGGCGT 59.387 47.619 0.00 0.00 34.95 5.68
2992 3411 1.885887 TCCTTCTCAAAATGTTGGGCG 59.114 47.619 0.00 0.00 34.95 6.13
2993 3412 2.232208 CCTCCTTCTCAAAATGTTGGGC 59.768 50.000 0.00 0.00 34.95 5.36
2994 3413 2.827921 CCCTCCTTCTCAAAATGTTGGG 59.172 50.000 0.00 0.00 36.46 4.12
2995 3414 3.760684 CTCCCTCCTTCTCAAAATGTTGG 59.239 47.826 0.00 0.00 35.29 3.77
2996 3415 4.217118 CACTCCCTCCTTCTCAAAATGTTG 59.783 45.833 0.00 0.00 35.95 3.33
2997 3416 4.104738 TCACTCCCTCCTTCTCAAAATGTT 59.895 41.667 0.00 0.00 0.00 2.71
2998 3417 3.652869 TCACTCCCTCCTTCTCAAAATGT 59.347 43.478 0.00 0.00 0.00 2.71
2999 3418 4.292186 TCACTCCCTCCTTCTCAAAATG 57.708 45.455 0.00 0.00 0.00 2.32
3000 3419 5.488919 TGTATCACTCCCTCCTTCTCAAAAT 59.511 40.000 0.00 0.00 0.00 1.82
3001 3420 4.844085 TGTATCACTCCCTCCTTCTCAAAA 59.156 41.667 0.00 0.00 0.00 2.44
3002 3421 4.223032 GTGTATCACTCCCTCCTTCTCAAA 59.777 45.833 0.00 0.00 0.00 2.69
3003 3422 3.769844 GTGTATCACTCCCTCCTTCTCAA 59.230 47.826 0.00 0.00 0.00 3.02
3004 3423 3.245622 TGTGTATCACTCCCTCCTTCTCA 60.246 47.826 1.72 0.00 35.11 3.27
3005 3424 3.366396 TGTGTATCACTCCCTCCTTCTC 58.634 50.000 1.72 0.00 35.11 2.87
3006 3425 3.474798 TGTGTATCACTCCCTCCTTCT 57.525 47.619 1.72 0.00 35.11 2.85
3007 3426 3.452627 ACATGTGTATCACTCCCTCCTTC 59.547 47.826 0.00 0.00 35.11 3.46
3008 3427 3.198635 CACATGTGTATCACTCCCTCCTT 59.801 47.826 18.03 0.00 35.11 3.36
3009 3428 2.768527 CACATGTGTATCACTCCCTCCT 59.231 50.000 18.03 0.00 35.11 3.69
3010 3429 2.766263 TCACATGTGTATCACTCCCTCC 59.234 50.000 24.63 0.00 35.11 4.30
3014 3433 5.482908 AGAAAGTCACATGTGTATCACTCC 58.517 41.667 24.63 14.84 35.11 3.85
3019 3438 7.324616 GCAAAAAGAGAAAGTCACATGTGTATC 59.675 37.037 24.63 17.18 0.00 2.24
3029 3448 7.502226 TGATTAAGGAGCAAAAAGAGAAAGTCA 59.498 33.333 0.00 0.00 0.00 3.41
3109 3532 4.327680 AGGGTCAAACTCTAACTTCATGC 58.672 43.478 0.00 0.00 0.00 4.06
3113 3536 4.755629 GGTGAAGGGTCAAACTCTAACTTC 59.244 45.833 0.00 0.00 34.87 3.01
3116 3539 3.409570 GGGTGAAGGGTCAAACTCTAAC 58.590 50.000 0.00 0.00 34.87 2.34
3160 3583 2.594592 AGGTTGCCGCTTGGACAC 60.595 61.111 0.00 0.00 33.02 3.67
3161 3584 1.476845 TAGAGGTTGCCGCTTGGACA 61.477 55.000 0.00 0.00 34.91 4.02
3338 3761 5.289434 GCCAGCATTTCACATAGTTAAAAGC 59.711 40.000 0.00 0.00 0.00 3.51
3339 3762 5.512788 CGCCAGCATTTCACATAGTTAAAAG 59.487 40.000 0.00 0.00 0.00 2.27
3362 3786 5.629435 GGCTTTACTTTCAATTCCTGAAACG 59.371 40.000 0.00 0.00 46.80 3.60
3465 3889 2.959030 GAGGTGGCAAAAAGGAAGAACT 59.041 45.455 0.00 0.00 0.00 3.01
3474 3898 2.852449 TGTACGATGAGGTGGCAAAAA 58.148 42.857 0.00 0.00 0.00 1.94
3494 3918 7.777889 AAGGGGATAGGCAAATAGATGATAT 57.222 36.000 0.00 0.00 0.00 1.63
3539 3963 4.749245 AGTAACTGCGAAACCAATCAAG 57.251 40.909 0.00 0.00 0.00 3.02
3599 4023 7.798710 TCAGGAGAAGAGAAAGGATAGAAAA 57.201 36.000 0.00 0.00 0.00 2.29
3747 4171 6.477688 ACAACTTCAACAGAATGAGCAAATTG 59.522 34.615 0.00 0.00 39.69 2.32
3785 4209 9.447157 TCAGAACATAATGACAACATAATGACA 57.553 29.630 0.00 0.00 35.50 3.58
3786 4210 9.708222 GTCAGAACATAATGACAACATAATGAC 57.292 33.333 0.65 0.00 44.21 3.06
3787 4211 9.671279 AGTCAGAACATAATGACAACATAATGA 57.329 29.630 7.94 0.00 46.63 2.57
3790 4214 9.599866 CCTAGTCAGAACATAATGACAACATAA 57.400 33.333 7.94 0.00 46.63 1.90
3791 4215 7.710907 GCCTAGTCAGAACATAATGACAACATA 59.289 37.037 7.94 0.00 46.63 2.29
3792 4216 6.540189 GCCTAGTCAGAACATAATGACAACAT 59.460 38.462 7.94 0.00 46.63 2.71
3793 4217 5.874810 GCCTAGTCAGAACATAATGACAACA 59.125 40.000 7.94 0.00 46.63 3.33
3794 4218 5.874810 TGCCTAGTCAGAACATAATGACAAC 59.125 40.000 7.94 0.00 46.63 3.32
3820 4244 7.117523 AGAGATCGAATATATGCAGCTGAAAAC 59.882 37.037 20.43 0.00 0.00 2.43
3828 4252 7.880059 TGTTCAAGAGATCGAATATATGCAG 57.120 36.000 0.00 0.00 0.00 4.41
3927 4351 6.540995 ACAAATCCTCAGCTGATAATATGCT 58.459 36.000 18.63 3.25 37.56 3.79
4064 4488 1.965930 GTGTGCCCACATCGCTCAA 60.966 57.895 4.22 0.00 43.97 3.02
4109 4533 1.404391 CATGGATGGTTGAGCTGAAGC 59.596 52.381 8.26 8.26 42.49 3.86
4115 4539 0.940126 CGTAGCATGGATGGTTGAGC 59.060 55.000 0.00 0.00 39.52 4.26
4154 4578 3.718434 AGAGTATCCATTCCAGATGCCAA 59.282 43.478 0.00 0.00 33.66 4.52
4269 4693 3.118629 TGGTGTGGCTAGTGAAGATGATC 60.119 47.826 0.00 0.00 0.00 2.92
4405 4837 6.538742 TGATTACTTTAACATCTGTGCCTAGC 59.461 38.462 0.00 0.00 0.00 3.42
4451 4883 5.813080 AGATAAAATGAAGGCGTACCAAC 57.187 39.130 0.00 0.00 39.06 3.77
4563 4995 3.355077 ATGGAAACCGCCATGACAA 57.645 47.368 0.00 0.00 46.62 3.18
4675 5110 7.988599 GTCTTCTACTGTCATCTAGGTCTCTAA 59.011 40.741 0.00 0.00 0.00 2.10
4689 5124 5.293079 GCTTGATCCATTGTCTTCTACTGTC 59.707 44.000 0.00 0.00 0.00 3.51
4820 5338 5.629133 GCCCTCATGACAAGGAGTATAAACA 60.629 44.000 5.97 0.00 35.83 2.83
4977 5502 9.627123 GTAATGGCCTGCAGGATATATATAAAA 57.373 33.333 37.21 5.69 37.39 1.52
5096 5626 1.101635 CCTGATCCCATGCAGCACTG 61.102 60.000 0.00 0.00 0.00 3.66
5264 5794 0.468226 ACCGTTTCTGCTCCTCAACA 59.532 50.000 0.00 0.00 0.00 3.33
5265 5795 1.149148 GACCGTTTCTGCTCCTCAAC 58.851 55.000 0.00 0.00 0.00 3.18
5354 5884 6.723515 TGATGTCCCATCCTTCAACATTTTTA 59.276 34.615 2.02 0.00 31.04 1.52
5396 5926 1.234615 CCAGCGTTGGTCGTCCATTT 61.235 55.000 10.61 0.00 43.91 2.32
5429 5959 1.749258 GGGATTGAACGGACCCAGC 60.749 63.158 0.00 0.00 41.72 4.85
5550 6081 6.121776 TGAGGGAACTTACATAGCTGAAAA 57.878 37.500 0.00 0.00 44.43 2.29
5590 6121 6.060788 TGCCAAAAGGCATAAAAAGAAACAT 58.939 32.000 4.86 0.00 40.19 2.71
5795 6327 4.559300 GCAGCAGCATAGGTTCAAAAGAAA 60.559 41.667 0.00 0.00 41.58 2.52
5796 6328 3.057315 GCAGCAGCATAGGTTCAAAAGAA 60.057 43.478 0.00 0.00 41.58 2.52
5797 6329 2.489329 GCAGCAGCATAGGTTCAAAAGA 59.511 45.455 0.00 0.00 41.58 2.52
5879 6411 9.877178 ATTAATAATGAATAACACCCGCAAAAA 57.123 25.926 0.00 0.00 0.00 1.94
5880 6412 9.307121 CATTAATAATGAATAACACCCGCAAAA 57.693 29.630 7.17 0.00 41.46 2.44
5881 6413 8.470805 ACATTAATAATGAATAACACCCGCAAA 58.529 29.630 18.78 0.00 41.46 3.68
5882 6414 7.918033 CACATTAATAATGAATAACACCCGCAA 59.082 33.333 18.78 0.00 41.46 4.85
5883 6415 7.421599 CACATTAATAATGAATAACACCCGCA 58.578 34.615 18.78 0.00 41.46 5.69
5884 6416 6.362283 GCACATTAATAATGAATAACACCCGC 59.638 38.462 18.78 3.17 41.46 6.13
5885 6417 7.648142 AGCACATTAATAATGAATAACACCCG 58.352 34.615 18.78 0.00 41.46 5.28
5886 6418 8.850156 AGAGCACATTAATAATGAATAACACCC 58.150 33.333 18.78 0.25 41.46 4.61
5893 6425 8.850156 GGTACCAAGAGCACATTAATAATGAAT 58.150 33.333 18.78 4.83 41.46 2.57
5894 6426 8.052748 AGGTACCAAGAGCACATTAATAATGAA 58.947 33.333 18.78 0.00 41.46 2.57
5895 6427 7.498900 CAGGTACCAAGAGCACATTAATAATGA 59.501 37.037 18.78 0.00 41.46 2.57
5896 6428 7.255242 CCAGGTACCAAGAGCACATTAATAATG 60.255 40.741 15.94 11.14 44.48 1.90
5897 6429 6.772716 CCAGGTACCAAGAGCACATTAATAAT 59.227 38.462 15.94 0.00 0.00 1.28
5898 6430 6.119536 CCAGGTACCAAGAGCACATTAATAA 58.880 40.000 15.94 0.00 0.00 1.40
5899 6431 5.397447 CCCAGGTACCAAGAGCACATTAATA 60.397 44.000 15.94 0.00 0.00 0.98
5900 6432 4.526970 CCAGGTACCAAGAGCACATTAAT 58.473 43.478 15.94 0.00 0.00 1.40
5901 6433 3.308117 CCCAGGTACCAAGAGCACATTAA 60.308 47.826 15.94 0.00 0.00 1.40
5902 6434 2.238646 CCCAGGTACCAAGAGCACATTA 59.761 50.000 15.94 0.00 0.00 1.90
5919 6451 8.186821 GTCAAAGATATGAAAGAAACATCCCAG 58.813 37.037 0.00 0.00 0.00 4.45
6066 6599 7.791131 CGAAATTATCTTCAAGATCATGTCGTG 59.209 37.037 19.82 1.00 39.46 4.35
6068 6601 6.789403 GCGAAATTATCTTCAAGATCATGTCG 59.211 38.462 22.33 22.33 43.64 4.35
6140 6678 8.026607 TCGAATAATTTAGCCTTTCCAACAAAG 58.973 33.333 0.00 0.00 0.00 2.77
6151 6689 5.356751 TGTTGTGCATCGAATAATTTAGCCT 59.643 36.000 0.00 0.00 0.00 4.58
6238 6777 2.284190 GCATAGAGAGTGGGCTGTTTC 58.716 52.381 0.00 0.00 0.00 2.78
6244 6783 0.249657 CTTCGGCATAGAGAGTGGGC 60.250 60.000 0.00 0.00 0.00 5.36
6356 6895 6.949352 TTCTAAAGTAGATACGGTACCTGG 57.051 41.667 10.90 0.00 34.22 4.45
6379 6918 6.040391 TGGATGTTCCTGAAGAATTCGTTTTT 59.960 34.615 0.00 0.00 40.72 1.94
6383 6922 4.286297 TGGATGTTCCTGAAGAATTCGT 57.714 40.909 0.00 0.00 40.72 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.