Multiple sequence alignment - TraesCS7D01G171800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G171800 chr7D 100.000 3902 0 0 1 3902 124168066 124164165 0.000000e+00 7206.0
1 TraesCS7D01G171800 chr7D 78.150 1373 248 37 1446 2807 124029200 124030531 0.000000e+00 826.0
2 TraesCS7D01G171800 chr7D 84.501 471 43 15 3256 3725 63642686 63642245 4.630000e-119 438.0
3 TraesCS7D01G171800 chr7A 93.330 2264 107 16 831 3067 126794754 126792508 0.000000e+00 3304.0
4 TraesCS7D01G171800 chr7A 78.836 1375 238 40 1446 2807 126775742 126774408 0.000000e+00 878.0
5 TraesCS7D01G171800 chr7A 77.127 1434 252 55 1443 2852 126783910 126785291 0.000000e+00 761.0
6 TraesCS7D01G171800 chr7A 92.045 440 16 8 3472 3902 210861009 210861438 5.580000e-168 601.0
7 TraesCS7D01G171800 chr7A 81.552 580 59 27 7 548 126796153 126795584 5.990000e-118 435.0
8 TraesCS7D01G171800 chr7B 92.187 2099 98 32 977 3065 85843397 85841355 0.000000e+00 2907.0
9 TraesCS7D01G171800 chr7B 78.245 1379 239 43 1446 2807 85781861 85780527 0.000000e+00 828.0
10 TraesCS7D01G171800 chr7B 95.577 407 13 4 568 972 85843847 85843444 0.000000e+00 647.0
11 TraesCS7D01G171800 chr7B 75.849 265 54 6 2545 2807 85777471 85777215 4.090000e-25 126.0
12 TraesCS7D01G171800 chr7B 87.500 72 6 2 3129 3197 85833356 85833285 3.230000e-11 80.5
13 TraesCS7D01G171800 chr6A 77.876 1469 258 51 1442 2890 555359613 555361034 0.000000e+00 850.0
14 TraesCS7D01G171800 chr6A 77.612 201 33 10 2099 2293 555415483 555415289 1.150000e-20 111.0
15 TraesCS7D01G171800 chr6D 77.045 1455 259 57 1457 2890 410041068 410039668 0.000000e+00 767.0
16 TraesCS7D01G171800 chr6D 74.903 259 55 8 2040 2293 410116827 410116574 4.120000e-20 110.0
17 TraesCS7D01G171800 chr6B 76.786 1456 261 57 1457 2890 616427949 616426549 0.000000e+00 745.0
18 TraesCS7D01G171800 chr1D 83.633 556 51 20 3256 3807 285559024 285559543 1.630000e-133 486.0
19 TraesCS7D01G171800 chr3B 83.774 530 46 20 3256 3783 157760205 157759714 2.120000e-127 466.0
20 TraesCS7D01G171800 chr3B 96.875 32 0 1 3212 3242 136996052 136996021 7.000000e-03 52.8
21 TraesCS7D01G171800 chr2A 81.524 617 64 26 3210 3810 709176296 709175714 2.750000e-126 462.0
22 TraesCS7D01G171800 chr2A 82.205 517 56 16 3256 3771 103128777 103129258 2.810000e-111 412.0
23 TraesCS7D01G171800 chr4D 91.638 287 24 0 3256 3542 95773762 95773476 7.860000e-107 398.0
24 TraesCS7D01G171800 chr2B 87.889 289 32 3 3256 3542 538233322 538233035 1.740000e-88 337.0
25 TraesCS7D01G171800 chr5B 84.911 338 36 6 3219 3542 606906787 606907123 1.050000e-85 327.0
26 TraesCS7D01G171800 chr5B 89.431 246 25 1 3219 3464 586267470 586267714 3.790000e-80 309.0
27 TraesCS7D01G171800 chr5B 84.043 94 11 3 2742 2833 418012573 418012482 1.930000e-13 87.9
28 TraesCS7D01G171800 chr2D 92.000 75 6 0 556 630 316127866 316127792 5.330000e-19 106.0
29 TraesCS7D01G171800 chr5D 97.561 41 1 0 577 617 547208708 547208668 1.950000e-08 71.3
30 TraesCS7D01G171800 chr5A 89.130 46 5 0 3215 3260 598011598 598011553 1.510000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G171800 chr7D 124164165 124168066 3901 True 7206.0 7206 100.000 1 3902 1 chr7D.!!$R2 3901
1 TraesCS7D01G171800 chr7D 124029200 124030531 1331 False 826.0 826 78.150 1446 2807 1 chr7D.!!$F1 1361
2 TraesCS7D01G171800 chr7A 126792508 126796153 3645 True 1869.5 3304 87.441 7 3067 2 chr7A.!!$R2 3060
3 TraesCS7D01G171800 chr7A 126774408 126775742 1334 True 878.0 878 78.836 1446 2807 1 chr7A.!!$R1 1361
4 TraesCS7D01G171800 chr7A 126783910 126785291 1381 False 761.0 761 77.127 1443 2852 1 chr7A.!!$F1 1409
5 TraesCS7D01G171800 chr7B 85841355 85843847 2492 True 1777.0 2907 93.882 568 3065 2 chr7B.!!$R3 2497
6 TraesCS7D01G171800 chr7B 85777215 85781861 4646 True 477.0 828 77.047 1446 2807 2 chr7B.!!$R2 1361
7 TraesCS7D01G171800 chr6A 555359613 555361034 1421 False 850.0 850 77.876 1442 2890 1 chr6A.!!$F1 1448
8 TraesCS7D01G171800 chr6D 410039668 410041068 1400 True 767.0 767 77.045 1457 2890 1 chr6D.!!$R1 1433
9 TraesCS7D01G171800 chr6B 616426549 616427949 1400 True 745.0 745 76.786 1457 2890 1 chr6B.!!$R1 1433
10 TraesCS7D01G171800 chr1D 285559024 285559543 519 False 486.0 486 83.633 3256 3807 1 chr1D.!!$F1 551
11 TraesCS7D01G171800 chr2A 709175714 709176296 582 True 462.0 462 81.524 3210 3810 1 chr2A.!!$R1 600

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
789 1064 0.039708 GTGTGCTCCTTTTCTGCTGC 60.040 55.0 0.0 0.0 0.00 5.25 F
1155 1795 0.105039 GTCCGATGAAAGGGCTCGAT 59.895 55.0 0.0 0.0 34.41 3.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2078 2760 1.078143 GTCCTCATCACCAGCCACC 60.078 63.158 0.0 0.0 0.0 4.61 R
3098 4173 0.247814 CGCAGCATCGTTCCAATCAC 60.248 55.000 0.0 0.0 0.0 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 7.817418 ACAGATAGTTGGTGTTGTTTGTAAT 57.183 32.000 0.00 0.00 0.00 1.89
56 57 9.825972 CAGATAGTTGGTGTTGTTTGTAATAAG 57.174 33.333 0.00 0.00 0.00 1.73
57 58 9.569122 AGATAGTTGGTGTTGTTTGTAATAAGT 57.431 29.630 0.00 0.00 0.00 2.24
65 66 8.732531 GGTGTTGTTTGTAATAAGTATAAGCCA 58.267 33.333 0.00 0.00 0.00 4.75
128 137 5.991861 TCACCAAGGTCTAAAACACAACTA 58.008 37.500 0.00 0.00 0.00 2.24
130 139 7.737869 TCACCAAGGTCTAAAACACAACTATA 58.262 34.615 0.00 0.00 0.00 1.31
135 144 9.878599 CAAGGTCTAAAACACAACTATAAACTG 57.121 33.333 0.00 0.00 0.00 3.16
140 149 8.828644 TCTAAAACACAACTATAAACTGCGAAA 58.171 29.630 0.00 0.00 0.00 3.46
185 194 8.028540 ACTTTCAAAATCAGACAAAAACCAAC 57.971 30.769 0.00 0.00 0.00 3.77
187 196 5.423886 TCAAAATCAGACAAAAACCAACCC 58.576 37.500 0.00 0.00 0.00 4.11
188 197 5.188751 TCAAAATCAGACAAAAACCAACCCT 59.811 36.000 0.00 0.00 0.00 4.34
191 200 2.024846 TCAGACAAAAACCAACCCTGGA 60.025 45.455 0.00 0.00 46.92 3.86
233 242 2.497138 CAGTCAACATCCTTGTCAGCA 58.503 47.619 0.00 0.00 34.06 4.41
238 259 1.901591 ACATCCTTGTCAGCACCAAG 58.098 50.000 3.75 3.75 39.19 3.61
271 292 3.374988 TGCTGCAAAAATGATCGACTAGG 59.625 43.478 0.00 0.00 0.00 3.02
283 304 5.773575 TGATCGACTAGGAAATGATAGTGC 58.226 41.667 0.00 0.00 32.43 4.40
292 313 8.058847 ACTAGGAAATGATAGTGCCCAATTTTA 58.941 33.333 0.00 0.00 31.09 1.52
296 317 9.394767 GGAAATGATAGTGCCCAATTTTATTTT 57.605 29.630 0.00 0.00 0.00 1.82
330 351 7.816945 AAATTCTCAATAATCCAAACAAGCG 57.183 32.000 0.00 0.00 0.00 4.68
343 364 7.384439 TCCAAACAAGCGTTATATTCAATCA 57.616 32.000 0.00 0.00 33.99 2.57
345 366 7.335673 TCCAAACAAGCGTTATATTCAATCAGA 59.664 33.333 0.00 0.00 33.99 3.27
348 369 7.706281 ACAAGCGTTATATTCAATCAGAGAG 57.294 36.000 0.00 0.00 0.00 3.20
351 372 6.155827 AGCGTTATATTCAATCAGAGAGAGC 58.844 40.000 0.00 0.00 0.00 4.09
359 380 4.818642 TCAATCAGAGAGAGCTTCAACAG 58.181 43.478 0.00 0.00 0.00 3.16
456 501 4.142182 ACCTCAAAACTTCACACAACCATG 60.142 41.667 0.00 0.00 0.00 3.66
462 507 9.072375 TCAAAACTTCACACAACCATGATATTA 57.928 29.630 0.00 0.00 0.00 0.98
463 508 9.689976 CAAAACTTCACACAACCATGATATTAA 57.310 29.630 0.00 0.00 0.00 1.40
467 512 9.466497 ACTTCACACAACCATGATATTAAATCT 57.534 29.630 0.00 0.00 0.00 2.40
468 513 9.726232 CTTCACACAACCATGATATTAAATCTG 57.274 33.333 0.00 0.00 0.00 2.90
517 562 8.542953 CAAGTAGGAAGAAAATGAAAGCAAAAC 58.457 33.333 0.00 0.00 0.00 2.43
530 575 9.777575 AATGAAAGCAAAACTTCAAATTCAAAG 57.222 25.926 0.00 0.00 37.75 2.77
553 823 7.019656 AGCCATTTTGGGTCAAATTCTAAAT 57.980 32.000 0.00 0.00 46.99 1.40
554 824 7.105588 AGCCATTTTGGGTCAAATTCTAAATC 58.894 34.615 0.00 0.00 46.99 2.17
564 834 7.021790 GGTCAAATTCTAAATCAGACGGTTTC 58.978 38.462 0.00 0.00 31.12 2.78
566 836 4.859629 ATTCTAAATCAGACGGTTTCGC 57.140 40.909 0.00 0.00 40.63 4.70
621 891 8.880750 GGTAGTTTGAGGTTGTAATATGAACTC 58.119 37.037 0.00 0.00 0.00 3.01
629 899 7.082972 AGGTTGTAATATGAACTCCCCTCTAT 58.917 38.462 0.00 0.00 0.00 1.98
697 967 9.801714 TGTAAATTTCTCGAGAAAAACGATAAC 57.198 29.630 36.61 26.25 45.81 1.89
699 969 8.934973 AAATTTCTCGAGAAAAACGATAACAG 57.065 30.769 36.61 0.00 45.81 3.16
764 1039 5.122396 CCCAAACTCGAGATAGGTTTTTCTG 59.878 44.000 21.68 0.00 31.87 3.02
786 1061 1.576421 CGGTGTGCTCCTTTTCTGC 59.424 57.895 0.00 0.00 0.00 4.26
787 1062 0.886490 CGGTGTGCTCCTTTTCTGCT 60.886 55.000 0.00 0.00 0.00 4.24
788 1063 0.595095 GGTGTGCTCCTTTTCTGCTG 59.405 55.000 0.00 0.00 0.00 4.41
789 1064 0.039708 GTGTGCTCCTTTTCTGCTGC 60.040 55.000 0.00 0.00 0.00 5.25
892 1488 1.300481 TTTGATTTGGTGACGCACGA 58.700 45.000 0.00 0.00 34.83 4.35
907 1503 1.399727 GCACGACCCAAAAACTCATCG 60.400 52.381 0.00 0.00 35.74 3.84
983 1614 2.611473 CCACTCTTTCAGATCACGCACT 60.611 50.000 0.00 0.00 0.00 4.40
985 1616 3.856521 CACTCTTTCAGATCACGCACTAG 59.143 47.826 0.00 0.00 0.00 2.57
986 1617 3.508012 ACTCTTTCAGATCACGCACTAGT 59.492 43.478 0.00 0.00 0.00 2.57
987 1618 4.700692 ACTCTTTCAGATCACGCACTAGTA 59.299 41.667 0.00 0.00 0.00 1.82
1014 1654 2.514592 CCAATGCTGCGACGGGAT 60.515 61.111 0.00 0.00 0.00 3.85
1029 1669 2.894387 GATGTCGAGGCAGGCAGC 60.894 66.667 0.00 0.00 44.65 5.25
1155 1795 0.105039 GTCCGATGAAAGGGCTCGAT 59.895 55.000 0.00 0.00 34.41 3.59
1158 1798 0.249073 CGATGAAAGGGCTCGATCGT 60.249 55.000 15.94 0.00 34.41 3.73
1321 1961 0.250989 CTACGCTAGCTAGCTCCCCT 60.251 60.000 36.02 18.85 46.85 4.79
1322 1962 0.537600 TACGCTAGCTAGCTCCCCTG 60.538 60.000 36.02 24.28 46.85 4.45
1323 1963 1.830408 CGCTAGCTAGCTCCCCTGT 60.830 63.158 36.02 0.00 46.85 4.00
1351 1991 2.809601 ACTCACAATCGGACGCGC 60.810 61.111 5.73 0.00 0.00 6.86
1353 1993 3.071459 CTCACAATCGGACGCGCAC 62.071 63.158 5.73 0.00 0.00 5.34
1436 2113 1.306397 TGGCTCTGGCAGGATCAGA 60.306 57.895 15.73 0.00 40.87 3.27
1658 2335 0.685097 CAACTCAGGTCGGGGAAGAA 59.315 55.000 0.00 0.00 0.00 2.52
1932 2609 1.464608 CACGCGAACATGGTGAAGAAT 59.535 47.619 15.93 0.00 33.58 2.40
1945 2622 3.879892 GGTGAAGAATAAGGTGATCAGCC 59.120 47.826 20.92 12.97 31.15 4.85
2061 2743 2.282251 TGCGACGAGGACCAGAGT 60.282 61.111 0.00 0.00 0.00 3.24
2388 3076 2.048222 CTTCCGGAGTTGCTCGCA 60.048 61.111 3.34 0.00 0.00 5.10
2451 3152 3.316573 GAGGAGGTCCAAGGCCGTG 62.317 68.421 12.27 12.27 38.89 4.94
2655 3356 2.281761 CTGGTGACCAGCGGCTTT 60.282 61.111 20.01 0.00 45.13 3.51
2877 3581 1.672356 CAAAGACGTGAGCTGGGGG 60.672 63.158 0.00 0.00 0.00 5.40
2914 3618 7.776745 TCCTCCCTCCTAATACATAACATAGT 58.223 38.462 0.00 0.00 0.00 2.12
2915 3619 7.894364 TCCTCCCTCCTAATACATAACATAGTC 59.106 40.741 0.00 0.00 0.00 2.59
2916 3620 7.896496 CCTCCCTCCTAATACATAACATAGTCT 59.104 40.741 0.00 0.00 0.00 3.24
2917 3621 8.880991 TCCCTCCTAATACATAACATAGTCTC 57.119 38.462 0.00 0.00 0.00 3.36
2954 4023 1.932011 TTGCCGGCAACCATTCGATG 61.932 55.000 37.30 0.00 0.00 3.84
2955 4024 2.408835 CCGGCAACCATTCGATGC 59.591 61.111 0.00 0.00 39.33 3.91
3025 4100 7.816640 TCAAGATTTCACTACTTATGTTTGCC 58.183 34.615 0.00 0.00 0.00 4.52
3038 4113 3.586470 TGTTTGCCTAAACCTCCTTGA 57.414 42.857 0.00 0.00 44.37 3.02
3044 4119 4.627015 TGCCTAAACCTCCTTGATAGGTA 58.373 43.478 0.00 0.00 46.85 3.08
3067 4142 7.722285 GGTATACTGGCAAATTGGGTAATAAGA 59.278 37.037 2.25 0.00 0.00 2.10
3068 4143 5.914898 ACTGGCAAATTGGGTAATAAGAC 57.085 39.130 0.00 0.00 0.00 3.01
3069 4144 4.398044 ACTGGCAAATTGGGTAATAAGACG 59.602 41.667 0.00 0.00 0.00 4.18
3070 4145 4.590918 TGGCAAATTGGGTAATAAGACGA 58.409 39.130 0.00 0.00 0.00 4.20
3071 4146 5.010933 TGGCAAATTGGGTAATAAGACGAA 58.989 37.500 0.00 0.00 0.00 3.85
3072 4147 5.477291 TGGCAAATTGGGTAATAAGACGAAA 59.523 36.000 0.00 0.00 0.00 3.46
3073 4148 6.033966 GGCAAATTGGGTAATAAGACGAAAG 58.966 40.000 0.00 0.00 0.00 2.62
3101 4176 7.939784 ACGTATATATAGGAATCTGCAGTGA 57.060 36.000 14.67 0.00 0.00 3.41
3102 4177 8.526667 ACGTATATATAGGAATCTGCAGTGAT 57.473 34.615 14.67 0.00 0.00 3.06
3103 4178 8.972127 ACGTATATATAGGAATCTGCAGTGATT 58.028 33.333 14.67 7.29 39.14 2.57
3104 4179 9.242477 CGTATATATAGGAATCTGCAGTGATTG 57.758 37.037 14.67 0.00 36.86 2.67
3105 4180 9.539825 GTATATATAGGAATCTGCAGTGATTGG 57.460 37.037 14.67 0.00 36.86 3.16
3106 4181 6.692849 ATATAGGAATCTGCAGTGATTGGA 57.307 37.500 14.67 0.00 36.86 3.53
3107 4182 3.726557 AGGAATCTGCAGTGATTGGAA 57.273 42.857 14.67 0.00 36.86 3.53
3108 4183 3.350833 AGGAATCTGCAGTGATTGGAAC 58.649 45.455 14.67 0.00 36.86 3.62
3109 4184 2.096496 GGAATCTGCAGTGATTGGAACG 59.904 50.000 14.67 0.00 36.86 3.95
3110 4185 2.768253 ATCTGCAGTGATTGGAACGA 57.232 45.000 14.67 0.00 0.00 3.85
3111 4186 2.768253 TCTGCAGTGATTGGAACGAT 57.232 45.000 14.67 0.00 0.00 3.73
3112 4187 2.349590 TCTGCAGTGATTGGAACGATG 58.650 47.619 14.67 0.00 0.00 3.84
3113 4188 0.804364 TGCAGTGATTGGAACGATGC 59.196 50.000 0.00 0.00 0.00 3.91
3114 4189 1.089920 GCAGTGATTGGAACGATGCT 58.910 50.000 0.00 0.00 0.00 3.79
3115 4190 1.202110 GCAGTGATTGGAACGATGCTG 60.202 52.381 0.00 0.00 0.00 4.41
3116 4191 1.089920 AGTGATTGGAACGATGCTGC 58.910 50.000 0.00 0.00 0.00 5.25
3117 4192 0.247814 GTGATTGGAACGATGCTGCG 60.248 55.000 0.00 0.00 37.29 5.18
3119 4194 0.247814 GATTGGAACGATGCTGCGTG 60.248 55.000 0.00 0.00 44.86 5.34
3120 4195 2.257286 ATTGGAACGATGCTGCGTGC 62.257 55.000 0.00 3.50 44.86 5.34
3129 4204 4.874534 GCTGCGTGCATCAAACAT 57.125 50.000 0.00 0.00 42.31 2.71
3130 4205 2.355797 GCTGCGTGCATCAAACATG 58.644 52.632 0.00 0.00 42.31 3.21
3131 4206 0.387622 GCTGCGTGCATCAAACATGT 60.388 50.000 0.00 0.00 42.31 3.21
3132 4207 1.135717 GCTGCGTGCATCAAACATGTA 60.136 47.619 0.00 0.00 42.31 2.29
3133 4208 2.478370 GCTGCGTGCATCAAACATGTAT 60.478 45.455 0.00 0.00 42.31 2.29
3134 4209 3.242706 GCTGCGTGCATCAAACATGTATA 60.243 43.478 0.00 0.00 42.31 1.47
3135 4210 4.555313 GCTGCGTGCATCAAACATGTATAT 60.555 41.667 0.00 0.00 42.31 0.86
3136 4211 5.334028 GCTGCGTGCATCAAACATGTATATA 60.334 40.000 0.00 0.00 42.31 0.86
3137 4212 6.621380 GCTGCGTGCATCAAACATGTATATAT 60.621 38.462 0.00 0.00 42.31 0.86
3138 4213 6.601264 TGCGTGCATCAAACATGTATATATG 58.399 36.000 7.84 7.84 0.00 1.78
3139 4214 6.023435 GCGTGCATCAAACATGTATATATGG 58.977 40.000 13.34 0.00 32.32 2.74
3140 4215 6.023435 CGTGCATCAAACATGTATATATGGC 58.977 40.000 13.34 6.76 32.32 4.40
3141 4216 6.348376 CGTGCATCAAACATGTATATATGGCA 60.348 38.462 13.34 8.95 32.32 4.92
3142 4217 6.803320 GTGCATCAAACATGTATATATGGCAC 59.197 38.462 17.00 17.00 34.29 5.01
3156 4231 2.535012 TGGCACAACAAGTCGTATGA 57.465 45.000 0.00 0.00 31.92 2.15
3157 4232 3.052455 TGGCACAACAAGTCGTATGAT 57.948 42.857 0.00 0.00 31.92 2.45
3158 4233 4.195225 TGGCACAACAAGTCGTATGATA 57.805 40.909 0.00 0.00 31.92 2.15
3159 4234 3.930229 TGGCACAACAAGTCGTATGATAC 59.070 43.478 0.00 0.00 31.92 2.24
3160 4235 3.930229 GGCACAACAAGTCGTATGATACA 59.070 43.478 3.24 0.00 0.00 2.29
3161 4236 4.032900 GGCACAACAAGTCGTATGATACAG 59.967 45.833 3.24 0.00 0.00 2.74
3162 4237 4.625742 GCACAACAAGTCGTATGATACAGT 59.374 41.667 3.24 0.00 0.00 3.55
3163 4238 5.444613 GCACAACAAGTCGTATGATACAGTG 60.445 44.000 3.24 0.00 0.00 3.66
3164 4239 5.861787 CACAACAAGTCGTATGATACAGTGA 59.138 40.000 3.24 0.00 0.00 3.41
3165 4240 6.531594 CACAACAAGTCGTATGATACAGTGAT 59.468 38.462 3.24 0.00 0.00 3.06
3166 4241 7.700656 CACAACAAGTCGTATGATACAGTGATA 59.299 37.037 3.24 0.00 0.00 2.15
3167 4242 8.248253 ACAACAAGTCGTATGATACAGTGATAA 58.752 33.333 3.24 0.00 0.00 1.75
3168 4243 8.532341 CAACAAGTCGTATGATACAGTGATAAC 58.468 37.037 3.24 0.00 0.00 1.89
3169 4244 7.997482 ACAAGTCGTATGATACAGTGATAACT 58.003 34.615 3.24 0.00 0.00 2.24
3170 4245 9.117183 ACAAGTCGTATGATACAGTGATAACTA 57.883 33.333 3.24 0.00 0.00 2.24
3171 4246 9.946165 CAAGTCGTATGATACAGTGATAACTAA 57.054 33.333 3.24 0.00 0.00 2.24
3172 4247 9.947669 AAGTCGTATGATACAGTGATAACTAAC 57.052 33.333 3.24 0.00 0.00 2.34
3173 4248 9.117183 AGTCGTATGATACAGTGATAACTAACA 57.883 33.333 3.24 0.00 0.00 2.41
3174 4249 9.726232 GTCGTATGATACAGTGATAACTAACAA 57.274 33.333 3.24 0.00 0.00 2.83
3180 4255 8.717821 TGATACAGTGATAACTAACAAACTTGC 58.282 33.333 0.00 0.00 0.00 4.01
3181 4256 8.848474 ATACAGTGATAACTAACAAACTTGCT 57.152 30.769 0.00 0.00 0.00 3.91
3182 4257 9.938280 ATACAGTGATAACTAACAAACTTGCTA 57.062 29.630 0.00 0.00 0.00 3.49
3183 4258 8.848474 ACAGTGATAACTAACAAACTTGCTAT 57.152 30.769 0.00 0.00 0.00 2.97
3184 4259 8.936864 ACAGTGATAACTAACAAACTTGCTATC 58.063 33.333 0.00 0.00 0.00 2.08
3185 4260 8.110612 CAGTGATAACTAACAAACTTGCTATCG 58.889 37.037 0.00 0.00 0.00 2.92
3186 4261 7.817962 AGTGATAACTAACAAACTTGCTATCGT 59.182 33.333 0.00 0.00 0.00 3.73
3187 4262 7.898309 GTGATAACTAACAAACTTGCTATCGTG 59.102 37.037 0.00 0.00 0.00 4.35
3188 4263 7.815549 TGATAACTAACAAACTTGCTATCGTGA 59.184 33.333 0.00 0.00 0.00 4.35
3189 4264 6.854496 AACTAACAAACTTGCTATCGTGAA 57.146 33.333 0.00 0.00 0.00 3.18
3190 4265 7.435068 AACTAACAAACTTGCTATCGTGAAT 57.565 32.000 0.00 0.00 0.00 2.57
3191 4266 6.831769 ACTAACAAACTTGCTATCGTGAATG 58.168 36.000 0.00 0.00 0.00 2.67
3192 4267 5.689383 AACAAACTTGCTATCGTGAATGT 57.311 34.783 0.00 0.00 0.00 2.71
3193 4268 6.795098 AACAAACTTGCTATCGTGAATGTA 57.205 33.333 0.00 0.00 0.00 2.29
3194 4269 6.165659 ACAAACTTGCTATCGTGAATGTAC 57.834 37.500 0.00 0.00 0.00 2.90
3195 4270 5.699001 ACAAACTTGCTATCGTGAATGTACA 59.301 36.000 0.00 0.00 0.00 2.90
3196 4271 5.779806 AACTTGCTATCGTGAATGTACAC 57.220 39.130 0.00 0.00 37.42 2.90
3197 4272 4.181578 ACTTGCTATCGTGAATGTACACC 58.818 43.478 0.00 0.00 37.48 4.16
3198 4273 3.878160 TGCTATCGTGAATGTACACCA 57.122 42.857 0.00 0.00 37.48 4.17
3199 4274 3.780902 TGCTATCGTGAATGTACACCAG 58.219 45.455 0.00 0.00 37.48 4.00
3200 4275 3.194755 TGCTATCGTGAATGTACACCAGT 59.805 43.478 0.00 0.00 37.48 4.00
3201 4276 4.399934 TGCTATCGTGAATGTACACCAGTA 59.600 41.667 0.00 0.00 37.48 2.74
3210 4285 2.935481 GTACACCAGTACTTCCTCCG 57.065 55.000 0.00 0.00 45.66 4.63
3211 4286 2.165998 GTACACCAGTACTTCCTCCGT 58.834 52.381 0.00 0.00 45.66 4.69
3212 4287 2.592102 ACACCAGTACTTCCTCCGTA 57.408 50.000 0.00 0.00 0.00 4.02
3213 4288 2.444421 ACACCAGTACTTCCTCCGTAG 58.556 52.381 0.00 0.00 0.00 3.51
3214 4289 2.224967 ACACCAGTACTTCCTCCGTAGT 60.225 50.000 0.00 0.00 0.00 2.73
3215 4290 2.163815 CACCAGTACTTCCTCCGTAGTG 59.836 54.545 0.00 0.00 37.80 2.74
3216 4291 2.224967 ACCAGTACTTCCTCCGTAGTGT 60.225 50.000 0.00 0.00 36.84 3.55
3217 4292 3.009473 ACCAGTACTTCCTCCGTAGTGTA 59.991 47.826 0.00 0.00 36.84 2.90
3231 4306 3.673809 CGTAGTGTAAGAGCAACTCCAAC 59.326 47.826 0.00 0.00 0.00 3.77
3233 4308 1.194772 GTGTAAGAGCAACTCCAACGC 59.805 52.381 0.00 0.00 0.00 4.84
3234 4309 1.202592 TGTAAGAGCAACTCCAACGCA 60.203 47.619 0.00 0.00 0.00 5.24
3235 4310 1.461127 GTAAGAGCAACTCCAACGCAG 59.539 52.381 0.00 0.00 0.00 5.18
3242 4317 2.738521 CTCCAACGCAGTGACCCG 60.739 66.667 0.00 0.00 45.00 5.28
3324 4410 3.524606 CGGTCCGCGGATGTACCT 61.525 66.667 33.58 0.00 36.31 3.08
3361 4447 2.966309 GACCCAAAGCGGACAAGCG 61.966 63.158 0.00 0.00 43.00 4.68
3377 4463 2.013021 GCGAGATGCAGCTTTCCTC 58.987 57.895 5.67 0.00 45.45 3.71
3382 4468 2.543067 GATGCAGCTTTCCTCCCGGT 62.543 60.000 0.00 0.00 0.00 5.28
3421 4507 1.898574 CCACAACCTGCACTGGGAC 60.899 63.158 0.00 0.00 0.00 4.46
3423 4509 2.669569 CAACCTGCACTGGGACCG 60.670 66.667 0.00 0.00 0.00 4.79
3426 4512 1.827399 AACCTGCACTGGGACCGTAG 61.827 60.000 0.00 0.00 0.00 3.51
3527 4739 0.245539 TTGTCGAACTGGATCCGGTC 59.754 55.000 26.61 17.61 33.90 4.79
3536 4748 0.465097 TGGATCCGGTCGTAGAGGTC 60.465 60.000 7.39 0.00 36.95 3.85
3537 4749 1.171549 GGATCCGGTCGTAGAGGTCC 61.172 65.000 0.00 0.00 36.95 4.46
3538 4750 0.179023 GATCCGGTCGTAGAGGTCCT 60.179 60.000 0.00 0.00 36.95 3.85
3539 4751 0.258194 ATCCGGTCGTAGAGGTCCTT 59.742 55.000 0.00 0.00 36.95 3.36
3540 4752 0.679002 TCCGGTCGTAGAGGTCCTTG 60.679 60.000 0.00 0.00 36.95 3.61
3541 4753 1.664321 CCGGTCGTAGAGGTCCTTGG 61.664 65.000 0.00 0.00 36.95 3.61
3542 4754 0.964358 CGGTCGTAGAGGTCCTTGGT 60.964 60.000 0.00 0.00 36.95 3.67
3543 4755 0.816373 GGTCGTAGAGGTCCTTGGTC 59.184 60.000 0.00 0.00 36.95 4.02
3544 4756 0.450983 GTCGTAGAGGTCCTTGGTCG 59.549 60.000 0.00 0.00 36.95 4.79
3545 4757 0.037303 TCGTAGAGGTCCTTGGTCGT 59.963 55.000 0.00 0.00 0.00 4.34
3546 4758 0.170561 CGTAGAGGTCCTTGGTCGTG 59.829 60.000 0.00 0.00 0.00 4.35
3547 4759 1.542492 GTAGAGGTCCTTGGTCGTGA 58.458 55.000 0.00 0.00 0.00 4.35
3548 4760 2.100989 GTAGAGGTCCTTGGTCGTGAT 58.899 52.381 0.00 0.00 0.00 3.06
3549 4761 0.898320 AGAGGTCCTTGGTCGTGATG 59.102 55.000 0.00 0.00 0.00 3.07
3550 4762 0.608640 GAGGTCCTTGGTCGTGATGT 59.391 55.000 0.00 0.00 0.00 3.06
3551 4763 0.608640 AGGTCCTTGGTCGTGATGTC 59.391 55.000 0.00 0.00 0.00 3.06
3552 4764 0.736325 GGTCCTTGGTCGTGATGTCG 60.736 60.000 0.00 0.00 0.00 4.35
3553 4765 0.242825 GTCCTTGGTCGTGATGTCGA 59.757 55.000 0.00 0.00 37.51 4.20
3559 4771 4.470170 TCGTGATGTCGACGGGCG 62.470 66.667 11.62 12.44 42.69 6.13
3617 4838 3.744719 CACGGAGTCGCGGAGGAA 61.745 66.667 6.13 0.00 41.61 3.36
3695 4917 1.315216 GAGGAGGGGAAGCCTAGGT 59.685 63.158 11.31 0.00 33.84 3.08
3725 5043 2.729194 CGAAGAGGAAGAGGAAGAGGA 58.271 52.381 0.00 0.00 0.00 3.71
3728 5566 4.349365 GAAGAGGAAGAGGAAGAGGAAGA 58.651 47.826 0.00 0.00 0.00 2.87
3736 5574 1.296715 GAAGAGGAAGAAGGCGGCA 59.703 57.895 13.08 0.00 0.00 5.69
3738 5576 1.484444 AAGAGGAAGAAGGCGGCAGT 61.484 55.000 13.08 0.00 0.00 4.40
3759 5597 4.069232 CTGGAGGACGCGGCTTGA 62.069 66.667 13.91 0.00 0.00 3.02
3760 5598 3.997064 CTGGAGGACGCGGCTTGAG 62.997 68.421 13.91 0.00 0.00 3.02
3761 5599 4.821589 GGAGGACGCGGCTTGAGG 62.822 72.222 13.91 0.00 0.00 3.86
3762 5600 3.760035 GAGGACGCGGCTTGAGGA 61.760 66.667 13.91 0.00 0.00 3.71
3763 5601 3.708220 GAGGACGCGGCTTGAGGAG 62.708 68.421 13.91 0.00 0.00 3.69
3764 5602 4.821589 GGACGCGGCTTGAGGAGG 62.822 72.222 13.91 0.00 0.00 4.30
3765 5603 3.760035 GACGCGGCTTGAGGAGGA 61.760 66.667 12.47 0.00 0.00 3.71
3766 5604 3.708220 GACGCGGCTTGAGGAGGAG 62.708 68.421 12.47 0.00 0.00 3.69
3767 5605 4.521062 CGCGGCTTGAGGAGGAGG 62.521 72.222 0.00 0.00 0.00 4.30
3768 5606 3.077556 GCGGCTTGAGGAGGAGGA 61.078 66.667 0.00 0.00 0.00 3.71
3769 5607 3.087666 GCGGCTTGAGGAGGAGGAG 62.088 68.421 0.00 0.00 0.00 3.69
3770 5608 2.430610 CGGCTTGAGGAGGAGGAGG 61.431 68.421 0.00 0.00 0.00 4.30
3771 5609 1.002274 GGCTTGAGGAGGAGGAGGA 59.998 63.158 0.00 0.00 0.00 3.71
3835 5676 4.176752 GAGGCGGGGGCTACCTTG 62.177 72.222 0.00 0.00 38.98 3.61
3840 5681 4.796495 GGGGGCTACCTTGGCGTG 62.796 72.222 0.00 0.00 40.03 5.34
3842 5683 4.029809 GGGCTACCTTGGCGTGGT 62.030 66.667 6.48 6.48 41.28 4.16
3843 5684 2.746277 GGCTACCTTGGCGTGGTG 60.746 66.667 10.86 3.54 38.42 4.17
3844 5685 2.746277 GCTACCTTGGCGTGGTGG 60.746 66.667 10.86 9.14 38.42 4.61
3845 5686 2.747686 CTACCTTGGCGTGGTGGT 59.252 61.111 10.86 2.38 38.42 4.16
3846 5687 1.671054 CTACCTTGGCGTGGTGGTG 60.671 63.158 10.86 0.00 38.42 4.17
3847 5688 3.185299 TACCTTGGCGTGGTGGTGG 62.185 63.158 10.86 0.00 38.42 4.61
3848 5689 4.579384 CCTTGGCGTGGTGGTGGT 62.579 66.667 0.00 0.00 0.00 4.16
3849 5690 3.286751 CTTGGCGTGGTGGTGGTG 61.287 66.667 0.00 0.00 0.00 4.17
3856 5697 4.514585 TGGTGGTGGTGCGCCTTT 62.515 61.111 18.96 0.00 34.70 3.11
3858 5699 3.977244 GTGGTGGTGCGCCTTTGG 61.977 66.667 18.96 0.00 34.70 3.28
3868 5709 3.369921 GCCTTTGGCTTGGAGGTG 58.630 61.111 0.73 0.00 46.69 4.00
3870 5711 1.153756 CCTTTGGCTTGGAGGTGGT 59.846 57.895 0.00 0.00 0.00 4.16
3871 5712 0.895559 CCTTTGGCTTGGAGGTGGTC 60.896 60.000 0.00 0.00 0.00 4.02
3872 5713 1.228124 TTTGGCTTGGAGGTGGTCG 60.228 57.895 0.00 0.00 0.00 4.79
3874 5715 4.410400 GGCTTGGAGGTGGTCGGG 62.410 72.222 0.00 0.00 0.00 5.14
3877 5718 2.606519 TTGGAGGTGGTCGGGAGG 60.607 66.667 0.00 0.00 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 8.255905 ACACCAACTATCTGTATAACCAGTTAC 58.744 37.037 0.00 0.00 34.02 2.50
59 60 9.988815 GAACTTCTCTCAATTATCTATGGCTTA 57.011 33.333 0.00 0.00 0.00 3.09
61 62 8.027524 TGAACTTCTCTCAATTATCTATGGCT 57.972 34.615 0.00 0.00 0.00 4.75
62 63 8.845413 ATGAACTTCTCTCAATTATCTATGGC 57.155 34.615 0.00 0.00 0.00 4.40
97 106 7.227910 GTGTTTTAGACCTTGGTGATACTTTGA 59.772 37.037 0.00 0.00 0.00 2.69
102 111 6.485648 AGTTGTGTTTTAGACCTTGGTGATAC 59.514 38.462 0.00 0.00 0.00 2.24
105 114 4.850680 AGTTGTGTTTTAGACCTTGGTGA 58.149 39.130 0.00 0.00 0.00 4.02
112 121 7.013529 CGCAGTTTATAGTTGTGTTTTAGACC 58.986 38.462 0.00 0.00 0.00 3.85
140 149 3.009805 AGTTGAGGGTAAAATTAGGCGGT 59.990 43.478 0.00 0.00 0.00 5.68
144 153 9.996554 ATTTTGAAAGTTGAGGGTAAAATTAGG 57.003 29.630 0.00 0.00 0.00 2.69
152 161 6.361433 TGTCTGATTTTGAAAGTTGAGGGTA 58.639 36.000 0.00 0.00 0.00 3.69
172 181 2.838637 TCCAGGGTTGGTTTTTGTCT 57.161 45.000 0.00 0.00 45.26 3.41
214 223 2.498167 GTGCTGACAAGGATGTTGACT 58.502 47.619 0.00 0.00 40.74 3.41
226 235 1.342074 AGCTAGACTTGGTGCTGACA 58.658 50.000 0.00 0.00 34.19 3.58
257 278 7.386299 GCACTATCATTTCCTAGTCGATCATTT 59.614 37.037 0.00 0.00 0.00 2.32
261 282 5.164954 GGCACTATCATTTCCTAGTCGATC 58.835 45.833 0.00 0.00 0.00 3.69
264 285 3.069586 TGGGCACTATCATTTCCTAGTCG 59.930 47.826 0.00 0.00 0.00 4.18
308 329 6.515272 ACGCTTGTTTGGATTATTGAGAAT 57.485 33.333 0.00 0.00 0.00 2.40
316 337 9.944663 GATTGAATATAACGCTTGTTTGGATTA 57.055 29.630 0.00 0.00 37.02 1.75
323 344 7.981789 TCTCTCTGATTGAATATAACGCTTGTT 59.018 33.333 0.00 0.00 39.65 2.83
330 351 9.539825 TTGAAGCTCTCTCTGATTGAATATAAC 57.460 33.333 0.00 0.00 0.00 1.89
380 401 6.166984 TCTGAATCTAATTTCCGCTCTCAT 57.833 37.500 0.00 0.00 0.00 2.90
381 402 5.595885 CTCTGAATCTAATTTCCGCTCTCA 58.404 41.667 0.00 0.00 0.00 3.27
382 403 4.447389 GCTCTGAATCTAATTTCCGCTCTC 59.553 45.833 0.00 0.00 0.00 3.20
383 404 4.376146 GCTCTGAATCTAATTTCCGCTCT 58.624 43.478 0.00 0.00 0.00 4.09
384 405 3.496507 GGCTCTGAATCTAATTTCCGCTC 59.503 47.826 0.00 0.00 0.00 5.03
385 406 3.118261 TGGCTCTGAATCTAATTTCCGCT 60.118 43.478 0.00 0.00 0.00 5.52
386 407 3.206150 TGGCTCTGAATCTAATTTCCGC 58.794 45.455 0.00 0.00 0.00 5.54
387 408 6.382869 AAATGGCTCTGAATCTAATTTCCG 57.617 37.500 0.00 0.00 0.00 4.30
388 409 6.982724 CCAAAATGGCTCTGAATCTAATTTCC 59.017 38.462 0.00 0.00 0.00 3.13
389 410 6.982724 CCCAAAATGGCTCTGAATCTAATTTC 59.017 38.462 0.00 0.00 35.79 2.17
392 413 5.522641 ACCCAAAATGGCTCTGAATCTAAT 58.477 37.500 0.00 0.00 35.79 1.73
393 414 4.934356 ACCCAAAATGGCTCTGAATCTAA 58.066 39.130 0.00 0.00 35.79 2.10
394 415 4.591321 ACCCAAAATGGCTCTGAATCTA 57.409 40.909 0.00 0.00 35.79 1.98
396 417 5.659440 TTAACCCAAAATGGCTCTGAATC 57.341 39.130 0.00 0.00 35.79 2.52
434 455 4.097741 TCATGGTTGTGTGAAGTTTTGAGG 59.902 41.667 0.00 0.00 0.00 3.86
462 507 9.671279 AGAACTTGTTGAAAATTTTCCAGATTT 57.329 25.926 24.51 12.55 36.36 2.17
463 508 9.671279 AAGAACTTGTTGAAAATTTTCCAGATT 57.329 25.926 24.51 14.51 36.36 2.40
464 509 9.317936 GAAGAACTTGTTGAAAATTTTCCAGAT 57.682 29.630 24.51 11.90 36.36 2.90
465 510 7.763985 GGAAGAACTTGTTGAAAATTTTCCAGA 59.236 33.333 24.51 12.26 36.36 3.86
466 511 7.548780 TGGAAGAACTTGTTGAAAATTTTCCAG 59.451 33.333 24.51 17.37 36.41 3.86
467 512 7.390027 TGGAAGAACTTGTTGAAAATTTTCCA 58.610 30.769 24.51 13.68 38.32 3.53
468 513 7.841915 TGGAAGAACTTGTTGAAAATTTTCC 57.158 32.000 24.51 12.89 36.36 3.13
474 519 6.887545 TCCTACTTGGAAGAACTTGTTGAAAA 59.112 34.615 0.00 0.00 42.94 2.29
501 546 9.771915 TGAATTTGAAGTTTTGCTTTCATTTTC 57.228 25.926 0.00 0.00 37.59 2.29
517 562 5.532032 ACCCAAAATGGCTTTGAATTTGAAG 59.468 36.000 1.15 0.00 46.35 3.02
530 575 6.878389 TGATTTAGAATTTGACCCAAAATGGC 59.122 34.615 0.00 0.00 36.90 4.40
553 823 1.798223 CTGAAATGCGAAACCGTCTGA 59.202 47.619 0.00 0.00 0.00 3.27
554 824 1.135972 CCTGAAATGCGAAACCGTCTG 60.136 52.381 0.00 0.00 0.00 3.51
564 834 2.507339 AAACACAACCCTGAAATGCG 57.493 45.000 0.00 0.00 0.00 4.73
566 836 8.550376 CAATTTCTAAAACACAACCCTGAAATG 58.450 33.333 0.00 0.00 34.47 2.32
621 891 7.070571 TGTTTTTGCCCAAAATATATAGAGGGG 59.929 37.037 14.68 11.02 39.69 4.79
629 899 7.067496 TGAGGTTGTTTTTGCCCAAAATATA 57.933 32.000 6.98 0.00 39.69 0.86
726 1001 2.927004 TTGGGACTAGCGCAAACAG 58.073 52.632 11.47 3.22 45.15 3.16
764 1039 1.578206 GAAAAGGAGCACACCGGAGC 61.578 60.000 9.46 9.60 34.73 4.70
788 1063 2.125512 CGGACTAGTGCAGTGGGC 60.126 66.667 15.20 5.96 37.72 5.36
789 1064 0.892755 TAACGGACTAGTGCAGTGGG 59.107 55.000 15.20 0.00 37.72 4.61
858 1454 6.136071 CCAAATCAAATCTAAAGTATCGGCG 58.864 40.000 0.00 0.00 0.00 6.46
892 1488 1.071071 TCGTCCGATGAGTTTTTGGGT 59.929 47.619 0.00 0.00 0.00 4.51
983 1614 1.340248 GCATTGGTCGCTAGGCTACTA 59.660 52.381 0.00 0.00 0.00 1.82
985 1616 0.105039 AGCATTGGTCGCTAGGCTAC 59.895 55.000 0.00 0.00 38.15 3.58
986 1617 0.104855 CAGCATTGGTCGCTAGGCTA 59.895 55.000 0.00 0.00 37.72 3.93
987 1618 1.153289 CAGCATTGGTCGCTAGGCT 60.153 57.895 0.00 0.00 37.72 4.58
1200 1840 2.009108 CACGGTGATGATGAAGGCG 58.991 57.895 0.74 0.00 0.00 5.52
1321 1961 2.523168 TGAGTGGTGCTCCGGACA 60.523 61.111 0.00 0.46 43.48 4.02
1322 1962 2.048127 GTGAGTGGTGCTCCGGAC 60.048 66.667 0.00 0.00 43.48 4.79
1323 1963 1.480212 ATTGTGAGTGGTGCTCCGGA 61.480 55.000 2.93 2.93 43.48 5.14
1351 1991 2.357637 ACACCTGAAATTGTTGTCCGTG 59.642 45.455 0.00 0.00 0.00 4.94
1353 1993 2.031157 GGACACCTGAAATTGTTGTCCG 60.031 50.000 3.43 0.00 35.64 4.79
1641 2318 1.192803 GGTTCTTCCCCGACCTGAGT 61.193 60.000 0.00 0.00 0.00 3.41
1932 2609 1.672854 CGACGGGGCTGATCACCTTA 61.673 60.000 12.27 0.00 0.00 2.69
2078 2760 1.078143 GTCCTCATCACCAGCCACC 60.078 63.158 0.00 0.00 0.00 4.61
2428 3123 2.038975 CTTGGACCTCCTCCGGGA 59.961 66.667 0.00 0.00 43.03 5.14
2451 3152 1.216710 CTTGAGGGAGGTCACGAGC 59.783 63.158 0.00 0.00 0.00 5.03
2853 3557 1.265095 CAGCTCACGTCTTTGCAATGT 59.735 47.619 11.67 0.83 0.00 2.71
2877 3581 3.082548 GGAGGGAGGAACAAGCTTTAAC 58.917 50.000 0.00 0.00 0.00 2.01
2914 3618 6.874134 GGCAAAAGTATACAAAGTGAGAGAGA 59.126 38.462 5.50 0.00 0.00 3.10
2915 3619 6.183360 CGGCAAAAGTATACAAAGTGAGAGAG 60.183 42.308 5.50 0.00 0.00 3.20
2916 3620 5.637810 CGGCAAAAGTATACAAAGTGAGAGA 59.362 40.000 5.50 0.00 0.00 3.10
2917 3621 5.163854 CCGGCAAAAGTATACAAAGTGAGAG 60.164 44.000 5.50 0.00 0.00 3.20
2954 4023 4.043200 GCCACCAGGTTTCGCTGC 62.043 66.667 0.00 0.00 37.19 5.25
2955 4024 3.726517 CGCCACCAGGTTTCGCTG 61.727 66.667 0.00 0.00 37.19 5.18
3025 4100 7.525692 GCCAGTATACCTATCAAGGAGGTTTAG 60.526 44.444 0.00 0.00 45.40 1.85
3038 4113 5.663158 ACCCAATTTGCCAGTATACCTAT 57.337 39.130 0.00 0.00 0.00 2.57
3044 4119 6.262273 CGTCTTATTACCCAATTTGCCAGTAT 59.738 38.462 0.00 0.00 0.00 2.12
3075 4150 9.457436 TCACTGCAGATTCCTATATATACGTTA 57.543 33.333 23.35 0.00 0.00 3.18
3076 4151 8.349568 TCACTGCAGATTCCTATATATACGTT 57.650 34.615 23.35 0.00 0.00 3.99
3077 4152 7.939784 TCACTGCAGATTCCTATATATACGT 57.060 36.000 23.35 0.00 0.00 3.57
3078 4153 9.242477 CAATCACTGCAGATTCCTATATATACG 57.758 37.037 23.35 0.00 36.13 3.06
3079 4154 9.539825 CCAATCACTGCAGATTCCTATATATAC 57.460 37.037 23.35 0.00 36.13 1.47
3080 4155 9.492730 TCCAATCACTGCAGATTCCTATATATA 57.507 33.333 23.35 0.00 36.13 0.86
3081 4156 8.384693 TCCAATCACTGCAGATTCCTATATAT 57.615 34.615 23.35 0.00 36.13 0.86
3082 4157 7.797121 TCCAATCACTGCAGATTCCTATATA 57.203 36.000 23.35 0.00 36.13 0.86
3083 4158 6.692849 TCCAATCACTGCAGATTCCTATAT 57.307 37.500 23.35 0.00 36.13 0.86
3084 4159 6.291377 GTTCCAATCACTGCAGATTCCTATA 58.709 40.000 23.35 0.00 36.13 1.31
3085 4160 5.128919 GTTCCAATCACTGCAGATTCCTAT 58.871 41.667 23.35 1.17 36.13 2.57
3086 4161 4.517285 GTTCCAATCACTGCAGATTCCTA 58.483 43.478 23.35 0.00 36.13 2.94
3087 4162 3.350833 GTTCCAATCACTGCAGATTCCT 58.649 45.455 23.35 0.00 36.13 3.36
3088 4163 2.096496 CGTTCCAATCACTGCAGATTCC 59.904 50.000 23.35 0.00 36.13 3.01
3089 4164 3.002791 TCGTTCCAATCACTGCAGATTC 58.997 45.455 23.35 0.00 36.13 2.52
3090 4165 3.057969 TCGTTCCAATCACTGCAGATT 57.942 42.857 23.35 8.15 38.72 2.40
3091 4166 2.768253 TCGTTCCAATCACTGCAGAT 57.232 45.000 23.35 0.68 0.00 2.90
3092 4167 2.349590 CATCGTTCCAATCACTGCAGA 58.650 47.619 23.35 0.00 0.00 4.26
3093 4168 1.202110 GCATCGTTCCAATCACTGCAG 60.202 52.381 13.48 13.48 0.00 4.41
3094 4169 0.804364 GCATCGTTCCAATCACTGCA 59.196 50.000 0.00 0.00 0.00 4.41
3095 4170 1.089920 AGCATCGTTCCAATCACTGC 58.910 50.000 0.00 0.00 0.00 4.40
3096 4171 1.202110 GCAGCATCGTTCCAATCACTG 60.202 52.381 0.00 0.00 0.00 3.66
3097 4172 1.089920 GCAGCATCGTTCCAATCACT 58.910 50.000 0.00 0.00 0.00 3.41
3098 4173 0.247814 CGCAGCATCGTTCCAATCAC 60.248 55.000 0.00 0.00 0.00 3.06
3099 4174 0.673333 ACGCAGCATCGTTCCAATCA 60.673 50.000 0.00 0.00 40.07 2.57
3100 4175 0.247814 CACGCAGCATCGTTCCAATC 60.248 55.000 0.38 0.00 41.21 2.67
3101 4176 1.796151 CACGCAGCATCGTTCCAAT 59.204 52.632 0.38 0.00 41.21 3.16
3102 4177 2.965147 GCACGCAGCATCGTTCCAA 61.965 57.895 0.38 0.00 44.79 3.53
3103 4178 3.422303 GCACGCAGCATCGTTCCA 61.422 61.111 0.38 0.00 44.79 3.53
3112 4187 0.387622 ACATGTTTGATGCACGCAGC 60.388 50.000 0.00 0.00 45.96 5.25
3113 4188 2.898181 TACATGTTTGATGCACGCAG 57.102 45.000 2.30 0.00 0.00 5.18
3114 4189 6.348376 CCATATATACATGTTTGATGCACGCA 60.348 38.462 2.30 0.00 0.00 5.24
3115 4190 6.023435 CCATATATACATGTTTGATGCACGC 58.977 40.000 2.30 0.00 0.00 5.34
3116 4191 6.023435 GCCATATATACATGTTTGATGCACG 58.977 40.000 2.30 0.00 0.00 5.34
3117 4192 6.803320 GTGCCATATATACATGTTTGATGCAC 59.197 38.462 2.30 11.17 33.02 4.57
3118 4193 6.489361 TGTGCCATATATACATGTTTGATGCA 59.511 34.615 2.30 2.37 0.00 3.96
3119 4194 6.912082 TGTGCCATATATACATGTTTGATGC 58.088 36.000 2.30 0.00 0.00 3.91
3120 4195 8.351461 TGTTGTGCCATATATACATGTTTGATG 58.649 33.333 2.30 4.99 0.00 3.07
3121 4196 8.462589 TGTTGTGCCATATATACATGTTTGAT 57.537 30.769 2.30 0.00 0.00 2.57
3122 4197 7.872113 TGTTGTGCCATATATACATGTTTGA 57.128 32.000 2.30 0.00 0.00 2.69
3123 4198 8.190122 ACTTGTTGTGCCATATATACATGTTTG 58.810 33.333 2.30 0.00 0.00 2.93
3124 4199 8.292444 ACTTGTTGTGCCATATATACATGTTT 57.708 30.769 2.30 0.00 0.00 2.83
3125 4200 7.254761 CGACTTGTTGTGCCATATATACATGTT 60.255 37.037 2.30 0.00 0.00 2.71
3126 4201 6.202762 CGACTTGTTGTGCCATATATACATGT 59.797 38.462 2.69 2.69 0.00 3.21
3127 4202 6.202762 ACGACTTGTTGTGCCATATATACATG 59.797 38.462 0.00 0.00 0.00 3.21
3128 4203 6.288294 ACGACTTGTTGTGCCATATATACAT 58.712 36.000 0.00 0.00 0.00 2.29
3129 4204 5.666462 ACGACTTGTTGTGCCATATATACA 58.334 37.500 0.00 0.00 0.00 2.29
3130 4205 7.597369 TCATACGACTTGTTGTGCCATATATAC 59.403 37.037 4.05 0.00 0.00 1.47
3131 4206 7.662897 TCATACGACTTGTTGTGCCATATATA 58.337 34.615 4.05 0.00 0.00 0.86
3132 4207 6.521162 TCATACGACTTGTTGTGCCATATAT 58.479 36.000 4.05 0.00 0.00 0.86
3133 4208 5.908341 TCATACGACTTGTTGTGCCATATA 58.092 37.500 4.05 0.00 0.00 0.86
3134 4209 4.765273 TCATACGACTTGTTGTGCCATAT 58.235 39.130 4.05 0.00 0.00 1.78
3135 4210 4.195225 TCATACGACTTGTTGTGCCATA 57.805 40.909 4.05 0.00 0.00 2.74
3136 4211 3.052455 TCATACGACTTGTTGTGCCAT 57.948 42.857 4.05 0.00 0.00 4.40
3137 4212 2.535012 TCATACGACTTGTTGTGCCA 57.465 45.000 4.05 0.00 0.00 4.92
3138 4213 3.930229 TGTATCATACGACTTGTTGTGCC 59.070 43.478 4.05 0.00 0.00 5.01
3139 4214 4.625742 ACTGTATCATACGACTTGTTGTGC 59.374 41.667 4.05 0.00 0.00 4.57
3140 4215 5.861787 TCACTGTATCATACGACTTGTTGTG 59.138 40.000 4.05 0.00 0.00 3.33
3141 4216 6.020971 TCACTGTATCATACGACTTGTTGT 57.979 37.500 0.00 0.00 0.00 3.32
3142 4217 8.532341 GTTATCACTGTATCATACGACTTGTTG 58.468 37.037 0.00 0.00 0.00 3.33
3143 4218 8.467598 AGTTATCACTGTATCATACGACTTGTT 58.532 33.333 0.00 0.00 0.00 2.83
3144 4219 7.997482 AGTTATCACTGTATCATACGACTTGT 58.003 34.615 0.00 0.00 0.00 3.16
3145 4220 9.946165 TTAGTTATCACTGTATCATACGACTTG 57.054 33.333 0.00 0.00 34.06 3.16
3146 4221 9.947669 GTTAGTTATCACTGTATCATACGACTT 57.052 33.333 0.00 0.00 34.06 3.01
3147 4222 9.117183 TGTTAGTTATCACTGTATCATACGACT 57.883 33.333 0.00 0.00 34.06 4.18
3148 4223 9.726232 TTGTTAGTTATCACTGTATCATACGAC 57.274 33.333 0.00 0.00 34.06 4.34
3154 4229 8.717821 GCAAGTTTGTTAGTTATCACTGTATCA 58.282 33.333 0.00 0.00 34.06 2.15
3155 4230 8.936864 AGCAAGTTTGTTAGTTATCACTGTATC 58.063 33.333 0.00 0.00 34.06 2.24
3156 4231 8.848474 AGCAAGTTTGTTAGTTATCACTGTAT 57.152 30.769 0.00 0.00 34.06 2.29
3157 4232 9.938280 ATAGCAAGTTTGTTAGTTATCACTGTA 57.062 29.630 0.00 0.00 34.06 2.74
3158 4233 8.848474 ATAGCAAGTTTGTTAGTTATCACTGT 57.152 30.769 0.00 0.00 34.06 3.55
3159 4234 8.110612 CGATAGCAAGTTTGTTAGTTATCACTG 58.889 37.037 0.00 0.00 34.06 3.66
3160 4235 7.817962 ACGATAGCAAGTTTGTTAGTTATCACT 59.182 33.333 0.00 0.00 42.67 3.41
3161 4236 7.898309 CACGATAGCAAGTTTGTTAGTTATCAC 59.102 37.037 0.00 0.00 42.67 3.06
3162 4237 7.815549 TCACGATAGCAAGTTTGTTAGTTATCA 59.184 33.333 0.00 0.00 42.67 2.15
3163 4238 8.181487 TCACGATAGCAAGTTTGTTAGTTATC 57.819 34.615 0.00 0.00 42.67 1.75
3164 4239 8.542497 TTCACGATAGCAAGTTTGTTAGTTAT 57.458 30.769 0.00 0.00 42.67 1.89
3165 4240 7.949903 TTCACGATAGCAAGTTTGTTAGTTA 57.050 32.000 0.00 0.00 42.67 2.24
3166 4241 6.854496 TTCACGATAGCAAGTTTGTTAGTT 57.146 33.333 0.00 0.00 42.67 2.24
3167 4242 6.426937 ACATTCACGATAGCAAGTTTGTTAGT 59.573 34.615 0.00 0.00 42.67 2.24
3168 4243 6.831769 ACATTCACGATAGCAAGTTTGTTAG 58.168 36.000 0.00 0.00 42.67 2.34
3169 4244 6.795098 ACATTCACGATAGCAAGTTTGTTA 57.205 33.333 0.00 0.00 42.67 2.41
3170 4245 5.689383 ACATTCACGATAGCAAGTTTGTT 57.311 34.783 0.00 0.00 42.67 2.83
3171 4246 5.699001 TGTACATTCACGATAGCAAGTTTGT 59.301 36.000 0.00 0.00 42.67 2.83
3172 4247 6.015504 GTGTACATTCACGATAGCAAGTTTG 58.984 40.000 0.00 0.00 42.67 2.93
3173 4248 5.121768 GGTGTACATTCACGATAGCAAGTTT 59.878 40.000 0.00 0.00 39.00 2.66
3174 4249 4.630069 GGTGTACATTCACGATAGCAAGTT 59.370 41.667 0.00 0.00 39.00 2.66
3175 4250 4.181578 GGTGTACATTCACGATAGCAAGT 58.818 43.478 0.00 0.00 39.00 3.16
3176 4251 4.180817 TGGTGTACATTCACGATAGCAAG 58.819 43.478 0.00 0.00 39.00 4.01
3177 4252 4.180817 CTGGTGTACATTCACGATAGCAA 58.819 43.478 0.00 0.00 39.00 3.91
3178 4253 3.194755 ACTGGTGTACATTCACGATAGCA 59.805 43.478 0.00 0.00 39.00 3.49
3179 4254 3.782046 ACTGGTGTACATTCACGATAGC 58.218 45.455 0.00 0.00 39.00 2.97
3191 4266 2.165998 ACGGAGGAAGTACTGGTGTAC 58.834 52.381 0.00 0.00 46.89 2.90
3192 4267 2.592102 ACGGAGGAAGTACTGGTGTA 57.408 50.000 0.00 0.00 0.00 2.90
3193 4268 2.224967 ACTACGGAGGAAGTACTGGTGT 60.225 50.000 0.00 0.00 0.00 4.16
3194 4269 2.163815 CACTACGGAGGAAGTACTGGTG 59.836 54.545 0.00 0.00 0.00 4.17
3195 4270 2.224967 ACACTACGGAGGAAGTACTGGT 60.225 50.000 0.00 0.00 0.00 4.00
3196 4271 2.444421 ACACTACGGAGGAAGTACTGG 58.556 52.381 0.00 0.00 0.00 4.00
3197 4272 4.940046 TCTTACACTACGGAGGAAGTACTG 59.060 45.833 0.00 0.00 0.00 2.74
3198 4273 5.171339 TCTTACACTACGGAGGAAGTACT 57.829 43.478 0.00 0.00 0.00 2.73
3199 4274 4.201901 GCTCTTACACTACGGAGGAAGTAC 60.202 50.000 0.00 0.00 0.00 2.73
3200 4275 3.944015 GCTCTTACACTACGGAGGAAGTA 59.056 47.826 0.00 0.00 0.00 2.24
3201 4276 2.754002 GCTCTTACACTACGGAGGAAGT 59.246 50.000 0.00 0.00 0.00 3.01
3202 4277 2.753452 TGCTCTTACACTACGGAGGAAG 59.247 50.000 0.00 0.00 0.00 3.46
3203 4278 2.799017 TGCTCTTACACTACGGAGGAA 58.201 47.619 0.00 0.00 0.00 3.36
3204 4279 2.490903 GTTGCTCTTACACTACGGAGGA 59.509 50.000 0.00 0.00 0.00 3.71
3205 4280 2.492484 AGTTGCTCTTACACTACGGAGG 59.508 50.000 0.00 0.00 0.00 4.30
3206 4281 3.427773 GGAGTTGCTCTTACACTACGGAG 60.428 52.174 0.00 0.00 0.00 4.63
3207 4282 2.490903 GGAGTTGCTCTTACACTACGGA 59.509 50.000 0.00 0.00 0.00 4.69
3208 4283 2.230508 TGGAGTTGCTCTTACACTACGG 59.769 50.000 0.00 0.00 0.00 4.02
3209 4284 3.570926 TGGAGTTGCTCTTACACTACG 57.429 47.619 0.00 0.00 0.00 3.51
3210 4285 3.673809 CGTTGGAGTTGCTCTTACACTAC 59.326 47.826 0.00 0.00 0.00 2.73
3211 4286 3.859627 GCGTTGGAGTTGCTCTTACACTA 60.860 47.826 0.00 0.00 0.00 2.74
3212 4287 2.755650 CGTTGGAGTTGCTCTTACACT 58.244 47.619 0.00 0.00 0.00 3.55
3213 4288 1.194772 GCGTTGGAGTTGCTCTTACAC 59.805 52.381 0.00 0.00 0.00 2.90
3214 4289 1.202592 TGCGTTGGAGTTGCTCTTACA 60.203 47.619 0.00 0.00 0.00 2.41
3215 4290 1.461127 CTGCGTTGGAGTTGCTCTTAC 59.539 52.381 0.00 0.00 0.00 2.34
3216 4291 1.070134 ACTGCGTTGGAGTTGCTCTTA 59.930 47.619 0.00 0.00 0.00 2.10
3217 4292 0.179045 ACTGCGTTGGAGTTGCTCTT 60.179 50.000 0.00 0.00 0.00 2.85
3231 4306 4.351938 TCCGTTCGGGTCACTGCG 62.352 66.667 11.37 0.00 37.00 5.18
3233 4308 2.732016 TGTCCGTTCGGGTCACTG 59.268 61.111 11.37 0.00 37.00 3.66
3236 4311 3.980989 CCGTGTCCGTTCGGGTCA 61.981 66.667 11.37 8.35 42.61 4.02
3242 4317 2.589338 GACAAAATCCGTGTCCGTTC 57.411 50.000 0.00 0.00 39.62 3.95
3268 4354 2.754658 CTAGGCGGACGGGTGACT 60.755 66.667 0.00 0.00 0.00 3.41
3312 4398 3.609258 GCGTTAGGTACATCCGCG 58.391 61.111 0.00 0.00 41.99 6.46
3320 4406 4.541482 CGAGCGGCGCGTTAGGTA 62.541 66.667 27.59 0.00 0.00 3.08
3361 4447 0.813210 CGGGAGGAAAGCTGCATCTC 60.813 60.000 1.02 2.92 0.00 2.75
3399 4485 2.281070 AGTGCAGGTTGTGGCGAG 60.281 61.111 0.00 0.00 0.00 5.03
3421 4507 1.173444 CCCACCTCGATCTCCTACGG 61.173 65.000 0.00 0.00 0.00 4.02
3423 4509 1.797211 CGCCCACCTCGATCTCCTAC 61.797 65.000 0.00 0.00 0.00 3.18
3426 4512 3.917760 CCGCCCACCTCGATCTCC 61.918 72.222 0.00 0.00 0.00 3.71
3468 4572 2.928396 CAGGGGTGGGAGGTCGTT 60.928 66.667 0.00 0.00 0.00 3.85
3501 4605 0.677288 TCCAGTTCGACAACGTGGAT 59.323 50.000 0.00 0.00 36.07 3.41
3527 4739 0.170561 CACGACCAAGGACCTCTACG 59.829 60.000 0.00 1.66 0.00 3.51
3542 4754 4.470170 CGCCCGTCGACATCACGA 62.470 66.667 17.16 0.00 39.75 4.35
3695 4917 0.544357 TTCCTCTTCGCCTTCCTCCA 60.544 55.000 0.00 0.00 0.00 3.86
3725 5043 2.359230 GCTCACTGCCGCCTTCTT 60.359 61.111 0.00 0.00 35.15 2.52
3728 5566 4.711949 CCAGCTCACTGCCGCCTT 62.712 66.667 0.00 0.00 43.02 4.35
3736 5574 3.753434 CGCGTCCTCCAGCTCACT 61.753 66.667 0.00 0.00 0.00 3.41
3756 5594 0.633921 CTCCTCCTCCTCCTCCTCAA 59.366 60.000 0.00 0.00 0.00 3.02
3757 5595 1.292941 CCTCCTCCTCCTCCTCCTCA 61.293 65.000 0.00 0.00 0.00 3.86
3758 5596 0.996762 TCCTCCTCCTCCTCCTCCTC 60.997 65.000 0.00 0.00 0.00 3.71
3759 5597 0.998945 CTCCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
3760 5598 1.541672 CTCCTCCTCCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
3761 5599 0.996762 TCCTCCTCCTCCTCCTCCTC 60.997 65.000 0.00 0.00 0.00 3.71
3762 5600 0.998945 CTCCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
3763 5601 1.541672 CTCCTCCTCCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
3764 5602 0.996762 TCCTCCTCCTCCTCCTCCTC 60.997 65.000 0.00 0.00 0.00 3.71
3765 5603 0.998945 CTCCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
3766 5604 1.541672 CTCCTCCTCCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
3767 5605 1.541672 CCTCCTCCTCCTCCTCCTC 59.458 68.421 0.00 0.00 0.00 3.71
3768 5606 2.710826 GCCTCCTCCTCCTCCTCCT 61.711 68.421 0.00 0.00 0.00 3.69
3769 5607 2.123033 GCCTCCTCCTCCTCCTCC 60.123 72.222 0.00 0.00 0.00 4.30
3770 5608 2.520741 CGCCTCCTCCTCCTCCTC 60.521 72.222 0.00 0.00 0.00 3.71
3771 5609 4.150454 CCGCCTCCTCCTCCTCCT 62.150 72.222 0.00 0.00 0.00 3.69
3818 5659 4.176752 CAAGGTAGCCCCCGCCTC 62.177 72.222 0.00 0.00 34.57 4.70
3824 5665 4.796495 CCACGCCAAGGTAGCCCC 62.796 72.222 0.00 0.00 0.00 5.80
3825 5666 4.029809 ACCACGCCAAGGTAGCCC 62.030 66.667 0.00 0.00 37.67 5.19
3826 5667 2.746277 CACCACGCCAAGGTAGCC 60.746 66.667 0.00 0.00 37.23 3.93
3827 5668 2.746277 CCACCACGCCAAGGTAGC 60.746 66.667 0.00 0.00 37.23 3.58
3829 5670 2.428187 CACCACCACGCCAAGGTA 59.572 61.111 0.00 0.00 37.23 3.08
3830 5671 4.579384 CCACCACCACGCCAAGGT 62.579 66.667 0.00 0.00 40.85 3.50
3831 5672 4.579384 ACCACCACCACGCCAAGG 62.579 66.667 0.00 0.00 0.00 3.61
3832 5673 3.286751 CACCACCACCACGCCAAG 61.287 66.667 0.00 0.00 0.00 3.61
3839 5680 4.514585 AAAGGCGCACCACCACCA 62.515 61.111 10.83 0.00 39.06 4.17
3840 5681 3.977244 CAAAGGCGCACCACCACC 61.977 66.667 10.83 0.00 39.06 4.61
3852 5693 0.895559 GACCACCTCCAAGCCAAAGG 60.896 60.000 0.00 0.00 36.21 3.11
3853 5694 1.237285 CGACCACCTCCAAGCCAAAG 61.237 60.000 0.00 0.00 0.00 2.77
3854 5695 1.228124 CGACCACCTCCAAGCCAAA 60.228 57.895 0.00 0.00 0.00 3.28
3855 5696 2.429930 CGACCACCTCCAAGCCAA 59.570 61.111 0.00 0.00 0.00 4.52
3856 5697 3.636231 CCGACCACCTCCAAGCCA 61.636 66.667 0.00 0.00 0.00 4.75
3858 5699 3.316573 CTCCCGACCACCTCCAAGC 62.317 68.421 0.00 0.00 0.00 4.01
3859 5700 2.660064 CCTCCCGACCACCTCCAAG 61.660 68.421 0.00 0.00 0.00 3.61
3860 5701 2.606519 CCTCCCGACCACCTCCAA 60.607 66.667 0.00 0.00 0.00 3.53
3861 5702 3.596799 TCCTCCCGACCACCTCCA 61.597 66.667 0.00 0.00 0.00 3.86
3862 5703 2.760385 CTCCTCCCGACCACCTCC 60.760 72.222 0.00 0.00 0.00 4.30
3863 5704 3.462678 GCTCCTCCCGACCACCTC 61.463 72.222 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.