Multiple sequence alignment - TraesCS7D01G170500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G170500 chr7D 100.000 7508 0 0 1 7508 123049044 123056551 0.000000e+00 13865.0
1 TraesCS7D01G170500 chr7D 90.357 560 52 1 4637 5194 35194934 35195493 0.000000e+00 734.0
2 TraesCS7D01G170500 chr7D 84.146 82 9 4 4341 4418 265172303 265172384 8.080000e-10 76.8
3 TraesCS7D01G170500 chr7D 88.710 62 7 0 3164 3225 387912838 387912899 8.080000e-10 76.8
4 TraesCS7D01G170500 chr7D 80.000 105 16 4 3094 3195 447903570 447903672 1.040000e-08 73.1
5 TraesCS7D01G170500 chr7B 93.213 2829 128 34 925 3710 84209201 84212008 0.000000e+00 4102.0
6 TraesCS7D01G170500 chr7B 88.530 1857 105 20 5649 7433 84214769 84216589 0.000000e+00 2150.0
7 TraesCS7D01G170500 chr7B 87.102 597 31 24 50 621 84185935 84186510 1.060000e-177 634.0
8 TraesCS7D01G170500 chr7B 95.833 264 9 1 4362 4625 84214232 84214493 6.960000e-115 425.0
9 TraesCS7D01G170500 chr7B 96.139 259 6 1 4059 4317 84213644 84213898 3.240000e-113 420.0
10 TraesCS7D01G170500 chr7B 92.466 292 19 1 5200 5491 84214485 84214773 1.510000e-111 414.0
11 TraesCS7D01G170500 chr7B 94.694 245 4 3 3824 4060 84213242 84213485 9.200000e-99 372.0
12 TraesCS7D01G170500 chr7B 100.000 50 0 0 4312 4361 84214151 84214200 8.020000e-15 93.5
13 TraesCS7D01G170500 chr7A 94.061 1145 50 9 941 2076 126046625 126045490 0.000000e+00 1722.0
14 TraesCS7D01G170500 chr7A 89.820 1002 64 11 5667 6646 126041703 126040718 0.000000e+00 1251.0
15 TraesCS7D01G170500 chr7A 94.125 817 32 4 2262 3072 126045485 126044679 0.000000e+00 1229.0
16 TraesCS7D01G170500 chr7A 94.461 668 28 3 3052 3710 126044587 126043920 0.000000e+00 1020.0
17 TraesCS7D01G170500 chr7A 89.233 678 37 18 1 660 126049552 126048893 0.000000e+00 815.0
18 TraesCS7D01G170500 chr7A 96.013 301 12 0 3824 4124 126042677 126042377 2.430000e-134 490.0
19 TraesCS7D01G170500 chr7A 95.865 266 7 2 4362 4625 126042188 126041925 1.940000e-115 427.0
20 TraesCS7D01G170500 chr7A 94.850 233 12 0 5200 5432 126041933 126041701 1.540000e-96 364.0
21 TraesCS7D01G170500 chr7A 97.546 163 4 0 4202 4364 126042379 126042217 5.740000e-71 279.0
22 TraesCS7D01G170500 chr7A 88.412 233 8 6 7284 7508 126040405 126040184 5.780000e-66 263.0
23 TraesCS7D01G170500 chr7A 82.781 151 17 3 5496 5646 268888513 268888372 7.910000e-25 126.0
24 TraesCS7D01G170500 chr7A 77.570 107 18 4 3094 3196 547764690 547764586 8.140000e-05 60.2
25 TraesCS7D01G170500 chr5D 90.653 567 50 3 4635 5200 107032805 107032241 0.000000e+00 750.0
26 TraesCS7D01G170500 chr5D 93.333 60 2 2 4349 4407 52281983 52282041 3.730000e-13 87.9
27 TraesCS7D01G170500 chr4A 90.459 566 52 2 4635 5199 701988639 701988075 0.000000e+00 745.0
28 TraesCS7D01G170500 chr4A 89.571 163 14 3 5491 5651 569885360 569885199 3.550000e-48 204.0
29 TraesCS7D01G170500 chr4A 85.802 162 16 3 5491 5651 621146303 621146148 1.680000e-36 165.0
30 TraesCS7D01G170500 chr2B 90.351 570 51 4 4635 5204 689426006 689425441 0.000000e+00 745.0
31 TraesCS7D01G170500 chr6D 90.569 562 52 1 4635 5195 341076143 341075582 0.000000e+00 743.0
32 TraesCS7D01G170500 chr6D 90.811 555 45 3 4647 5201 99546561 99547109 0.000000e+00 737.0
33 TraesCS7D01G170500 chr1D 90.664 557 48 4 4647 5200 72438693 72438138 0.000000e+00 737.0
34 TraesCS7D01G170500 chr3D 89.982 569 52 4 4637 5201 132363595 132364162 0.000000e+00 730.0
35 TraesCS7D01G170500 chr3D 90.968 155 13 1 5493 5646 548637122 548637276 2.750000e-49 207.0
36 TraesCS7D01G170500 chr3D 91.892 74 6 0 3190 3263 121535879 121535952 3.710000e-18 104.0
37 TraesCS7D01G170500 chr4B 89.771 567 57 1 4635 5200 190204371 190204937 0.000000e+00 725.0
38 TraesCS7D01G170500 chr6B 88.462 156 16 2 5491 5645 43091351 43091505 3.580000e-43 187.0
39 TraesCS7D01G170500 chr6B 81.287 171 29 3 3093 3263 16439200 16439033 1.310000e-27 135.0
40 TraesCS7D01G170500 chr3B 80.117 171 26 4 3093 3263 173108487 173108649 3.680000e-23 121.0
41 TraesCS7D01G170500 chr5B 96.296 54 2 0 4349 4402 58759469 58759522 1.040000e-13 89.8
42 TraesCS7D01G170500 chr5B 93.333 60 2 2 4349 4407 55371866 55371924 3.730000e-13 87.9
43 TraesCS7D01G170500 chr5B 89.855 69 4 2 4335 4402 427242163 427242229 1.340000e-12 86.1
44 TraesCS7D01G170500 chr2A 93.220 59 3 1 4344 4402 199101270 199101213 1.340000e-12 86.1
45 TraesCS7D01G170500 chr1B 87.500 72 5 4 4332 4402 512989118 512989050 6.240000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G170500 chr7D 123049044 123056551 7507 False 13865.0 13865 100.000000 1 7508 1 chr7D.!!$F2 7507
1 TraesCS7D01G170500 chr7D 35194934 35195493 559 False 734.0 734 90.357000 4637 5194 1 chr7D.!!$F1 557
2 TraesCS7D01G170500 chr7B 84209201 84216589 7388 False 1139.5 4102 94.410714 925 7433 7 chr7B.!!$F2 6508
3 TraesCS7D01G170500 chr7B 84185935 84186510 575 False 634.0 634 87.102000 50 621 1 chr7B.!!$F1 571
4 TraesCS7D01G170500 chr7A 126040184 126049552 9368 True 786.0 1722 93.438600 1 7508 10 chr7A.!!$R3 7507
5 TraesCS7D01G170500 chr5D 107032241 107032805 564 True 750.0 750 90.653000 4635 5200 1 chr5D.!!$R1 565
6 TraesCS7D01G170500 chr4A 701988075 701988639 564 True 745.0 745 90.459000 4635 5199 1 chr4A.!!$R3 564
7 TraesCS7D01G170500 chr2B 689425441 689426006 565 True 745.0 745 90.351000 4635 5204 1 chr2B.!!$R1 569
8 TraesCS7D01G170500 chr6D 341075582 341076143 561 True 743.0 743 90.569000 4635 5195 1 chr6D.!!$R1 560
9 TraesCS7D01G170500 chr6D 99546561 99547109 548 False 737.0 737 90.811000 4647 5201 1 chr6D.!!$F1 554
10 TraesCS7D01G170500 chr1D 72438138 72438693 555 True 737.0 737 90.664000 4647 5200 1 chr1D.!!$R1 553
11 TraesCS7D01G170500 chr3D 132363595 132364162 567 False 730.0 730 89.982000 4637 5201 1 chr3D.!!$F2 564
12 TraesCS7D01G170500 chr4B 190204371 190204937 566 False 725.0 725 89.771000 4635 5200 1 chr4B.!!$F1 565

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
915 1719 0.030908 GGCTTCACCGGATAGACTCG 59.969 60.0 9.46 0.00 0.00 4.18 F
1626 3692 0.606096 TCACGGATGTGTACAGGGTG 59.394 55.0 0.00 0.66 46.49 4.61 F
2101 4175 0.796312 CACGTCCATGTGTTACTGCC 59.204 55.0 0.00 0.00 35.12 4.85 F
3796 6036 0.254178 AGATCACTTTCGCCCTGCAT 59.746 50.0 0.00 0.00 0.00 3.96 F
4633 8619 0.253327 GGAGTGGAAGTTAGGGCTGG 59.747 60.0 0.00 0.00 0.00 4.85 F
5512 9547 0.179056 CCCGCTTGGAATCGGTGTAT 60.179 55.0 1.36 0.00 43.87 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1737 3803 1.065928 GTATCCAGCCACGGTCTCG 59.934 63.158 0.00 0.00 43.02 4.04 R
3246 5462 0.375454 CGCGTTCAAAATATCGGCCA 59.625 50.000 2.24 0.00 0.00 5.36 R
3809 6049 0.685097 TCGGTGTAGAAAGCCTTGCT 59.315 50.000 0.00 0.00 42.56 3.91 R
5377 9412 0.029300 CCTTTGACCAAGTGCACGTG 59.971 55.000 23.76 23.76 0.00 4.49 R
5609 9644 0.107831 TTCCAGCGCTTTACACCTGT 59.892 50.000 7.50 0.00 0.00 4.00 R
6671 10760 0.532573 ATCACCGTCAGCAGATTCGT 59.467 50.000 0.00 0.00 0.00 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
102 113 0.817229 GGGCTGTAGATTGAGCTGCC 60.817 60.000 0.00 0.00 43.53 4.85
120 131 5.951747 AGCTGCCATTTGAAATTCTTAGGTA 59.048 36.000 0.00 0.00 0.00 3.08
148 159 7.555195 TCTTACTGTTTCGTACTGGATGAGATA 59.445 37.037 0.00 0.00 0.00 1.98
174 185 3.191371 GGGACATGGACAAGCAAAACTAG 59.809 47.826 0.00 0.00 0.00 2.57
175 186 3.366374 GGACATGGACAAGCAAAACTAGC 60.366 47.826 0.00 0.00 0.00 3.42
187 198 6.877611 AGCAAAACTAGCAGCTTTACTTAA 57.122 33.333 0.00 0.00 32.52 1.85
199 210 8.989980 AGCAGCTTTACTTAACTTTACTAACAG 58.010 33.333 0.00 0.00 0.00 3.16
200 211 8.771766 GCAGCTTTACTTAACTTTACTAACAGT 58.228 33.333 0.00 0.00 0.00 3.55
202 213 9.828039 AGCTTTACTTAACTTTACTAACAGTGT 57.172 29.630 0.00 0.00 0.00 3.55
224 235 0.375454 TATTTCGAACGGGCAATGCG 59.625 50.000 0.00 0.00 0.00 4.73
298 309 6.183360 GGGAAGTGAGTGAGAAAACAAATTCA 60.183 38.462 0.00 0.00 0.00 2.57
376 387 1.752498 CAGCTATGGCATTTGCAAGGA 59.248 47.619 21.34 0.00 44.36 3.36
433 444 3.740115 GTTTCACCATGTACTCCTGTGT 58.260 45.455 0.00 0.00 0.00 3.72
503 514 4.488126 AACTCATGTGATGGACAAAACG 57.512 40.909 0.94 0.00 38.36 3.60
521 532 1.553704 ACGGTTCCCTGGTACAAGATC 59.446 52.381 0.00 0.00 38.70 2.75
535 546 8.681486 TGGTACAAGATCCATGATTTCAATAG 57.319 34.615 0.00 0.00 31.92 1.73
547 558 4.158394 TGATTTCAATAGCAAGCAGTTCCC 59.842 41.667 0.00 0.00 0.00 3.97
603 628 5.028549 TCAAATCTGCTACTTCTGGGATC 57.971 43.478 0.00 0.00 0.00 3.36
607 634 4.679373 TCTGCTACTTCTGGGATCATTC 57.321 45.455 0.00 0.00 0.00 2.67
619 646 2.639065 GGATCATTCGGCCTTTGTGTA 58.361 47.619 0.00 0.00 0.00 2.90
621 648 4.385825 GGATCATTCGGCCTTTGTGTATA 58.614 43.478 0.00 0.00 0.00 1.47
625 654 7.174253 GGATCATTCGGCCTTTGTGTATAATAA 59.826 37.037 0.00 0.00 0.00 1.40
626 655 7.254227 TCATTCGGCCTTTGTGTATAATAAC 57.746 36.000 0.00 0.00 0.00 1.89
660 689 6.861065 TGTGAAACTTTATCCTTGTCTCAC 57.139 37.500 0.00 0.00 38.04 3.51
661 690 6.353323 TGTGAAACTTTATCCTTGTCTCACA 58.647 36.000 0.00 0.00 38.56 3.58
662 691 6.260050 TGTGAAACTTTATCCTTGTCTCACAC 59.740 38.462 0.00 0.00 36.61 3.82
663 692 6.260050 GTGAAACTTTATCCTTGTCTCACACA 59.740 38.462 0.00 0.00 32.76 3.72
664 693 6.998074 TGAAACTTTATCCTTGTCTCACACAT 59.002 34.615 0.00 0.00 33.90 3.21
665 694 7.173218 TGAAACTTTATCCTTGTCTCACACATC 59.827 37.037 0.00 0.00 33.90 3.06
666 695 6.365970 ACTTTATCCTTGTCTCACACATCT 57.634 37.500 0.00 0.00 33.90 2.90
667 696 6.169094 ACTTTATCCTTGTCTCACACATCTG 58.831 40.000 0.00 0.00 33.90 2.90
668 697 6.014242 ACTTTATCCTTGTCTCACACATCTGA 60.014 38.462 0.00 0.00 33.90 3.27
669 698 6.550938 TTATCCTTGTCTCACACATCTGAT 57.449 37.500 0.00 0.00 33.90 2.90
670 699 4.897509 TCCTTGTCTCACACATCTGATT 57.102 40.909 0.00 0.00 33.90 2.57
671 700 5.233083 TCCTTGTCTCACACATCTGATTT 57.767 39.130 0.00 0.00 33.90 2.17
672 701 5.624159 TCCTTGTCTCACACATCTGATTTT 58.376 37.500 0.00 0.00 33.90 1.82
673 702 6.064060 TCCTTGTCTCACACATCTGATTTTT 58.936 36.000 0.00 0.00 33.90 1.94
702 731 0.106669 GGTACCAGGGGAATGGAAGC 60.107 60.000 7.15 0.00 43.57 3.86
703 732 0.623723 GTACCAGGGGAATGGAAGCA 59.376 55.000 0.00 0.00 43.57 3.91
705 734 0.712380 ACCAGGGGAATGGAAGCATT 59.288 50.000 0.00 0.00 43.57 3.56
706 735 1.929494 ACCAGGGGAATGGAAGCATTA 59.071 47.619 0.00 0.00 43.57 1.90
707 736 2.314549 ACCAGGGGAATGGAAGCATTAA 59.685 45.455 0.00 0.00 43.57 1.40
709 738 3.132824 CCAGGGGAATGGAAGCATTAAAC 59.867 47.826 0.00 0.00 43.57 2.01
712 741 5.656416 CAGGGGAATGGAAGCATTAAACTAA 59.344 40.000 0.00 0.00 0.00 2.24
713 742 6.154363 CAGGGGAATGGAAGCATTAAACTAAA 59.846 38.462 0.00 0.00 0.00 1.85
714 743 6.154534 AGGGGAATGGAAGCATTAAACTAAAC 59.845 38.462 0.00 0.00 0.00 2.01
715 744 6.338146 GGGAATGGAAGCATTAAACTAAACC 58.662 40.000 0.00 0.00 0.00 3.27
718 747 7.875554 GGAATGGAAGCATTAAACTAAACCAAA 59.124 33.333 0.00 0.00 0.00 3.28
720 749 8.776376 ATGGAAGCATTAAACTAAACCAAATG 57.224 30.769 0.00 0.00 0.00 2.32
721 750 7.731054 TGGAAGCATTAAACTAAACCAAATGT 58.269 30.769 0.00 0.00 31.65 2.71
722 751 8.861086 TGGAAGCATTAAACTAAACCAAATGTA 58.139 29.630 0.00 0.00 31.65 2.29
756 785 8.970691 TTTTTCTAGAGCACATATTTTTGAGC 57.029 30.769 0.00 0.00 33.97 4.26
757 786 7.686438 TTTCTAGAGCACATATTTTTGAGCA 57.314 32.000 0.00 0.00 35.91 4.26
758 787 7.686438 TTCTAGAGCACATATTTTTGAGCAA 57.314 32.000 0.00 0.00 35.91 3.91
761 790 9.394767 TCTAGAGCACATATTTTTGAGCAATTA 57.605 29.630 0.00 0.00 35.91 1.40
765 794 9.090692 GAGCACATATTTTTGAGCAATTATTGT 57.909 29.630 6.81 0.00 35.91 2.71
780 1577 8.673711 AGCAATTATTGTTAGAACGCTTGATTA 58.326 29.630 6.81 0.00 0.00 1.75
784 1581 8.725405 TTATTGTTAGAACGCTTGATTATGGA 57.275 30.769 0.00 0.00 0.00 3.41
785 1582 7.624360 ATTGTTAGAACGCTTGATTATGGAA 57.376 32.000 0.00 0.00 0.00 3.53
802 1599 1.555533 GGAACTGTACTAGGCTTGGCT 59.444 52.381 0.00 1.64 0.00 4.75
803 1600 2.622436 GAACTGTACTAGGCTTGGCTG 58.378 52.381 6.97 0.00 0.00 4.85
804 1601 1.645710 ACTGTACTAGGCTTGGCTGT 58.354 50.000 6.97 5.88 0.00 4.40
805 1602 1.276421 ACTGTACTAGGCTTGGCTGTG 59.724 52.381 6.97 2.75 0.00 3.66
806 1603 0.036388 TGTACTAGGCTTGGCTGTGC 60.036 55.000 6.97 7.26 0.00 4.57
807 1604 1.084370 GTACTAGGCTTGGCTGTGCG 61.084 60.000 6.97 0.00 0.00 5.34
808 1605 2.238847 TACTAGGCTTGGCTGTGCGG 62.239 60.000 6.97 0.00 0.00 5.69
813 1610 4.034258 CTTGGCTGTGCGGCTGTG 62.034 66.667 0.00 0.00 39.32 3.66
831 1628 6.817270 GCTGTGCCACATAATTTTCATTAG 57.183 37.500 0.00 0.00 0.00 1.73
832 1629 6.563422 GCTGTGCCACATAATTTTCATTAGA 58.437 36.000 0.00 0.00 0.00 2.10
833 1630 7.035004 GCTGTGCCACATAATTTTCATTAGAA 58.965 34.615 0.00 0.00 0.00 2.10
834 1631 7.009540 GCTGTGCCACATAATTTTCATTAGAAC 59.990 37.037 0.00 0.00 32.39 3.01
835 1632 7.890515 TGTGCCACATAATTTTCATTAGAACA 58.109 30.769 0.00 0.00 32.39 3.18
836 1633 8.363390 TGTGCCACATAATTTTCATTAGAACAA 58.637 29.630 0.00 0.00 32.39 2.83
837 1634 9.202273 GTGCCACATAATTTTCATTAGAACAAA 57.798 29.630 0.00 0.00 32.39 2.83
838 1635 9.202273 TGCCACATAATTTTCATTAGAACAAAC 57.798 29.630 0.00 0.00 32.39 2.93
841 1638 9.405587 CACATAATTTTCATTAGAACAAACCGT 57.594 29.630 0.00 0.00 32.39 4.83
853 1650 0.518636 CAAACCGTGCCATGTCAGAG 59.481 55.000 0.00 0.00 0.00 3.35
857 1654 1.016130 CCGTGCCATGTCAGAGACAC 61.016 60.000 1.43 0.00 45.65 3.67
859 1656 1.436600 GTGCCATGTCAGAGACACAG 58.563 55.000 1.43 0.00 45.65 3.66
861 1658 1.001293 TGCCATGTCAGAGACACAGAC 59.999 52.381 1.43 0.00 45.65 3.51
863 1660 2.930023 GCCATGTCAGAGACACAGACTG 60.930 54.545 0.00 0.00 45.65 3.51
864 1661 2.298446 CCATGTCAGAGACACAGACTGT 59.702 50.000 1.07 1.07 45.65 3.55
902 1706 2.525629 TCGGACAGTGGGGCTTCA 60.526 61.111 0.00 0.00 0.00 3.02
913 1717 1.049289 GGGGCTTCACCGGATAGACT 61.049 60.000 9.46 0.00 40.62 3.24
914 1718 0.389757 GGGCTTCACCGGATAGACTC 59.610 60.000 9.46 0.00 40.62 3.36
915 1719 0.030908 GGCTTCACCGGATAGACTCG 59.969 60.000 9.46 0.00 0.00 4.18
917 1721 1.945394 GCTTCACCGGATAGACTCGTA 59.055 52.381 9.46 0.00 0.00 3.43
918 1722 2.031857 GCTTCACCGGATAGACTCGTAG 60.032 54.545 9.46 0.00 0.00 3.51
919 1723 2.996249 TCACCGGATAGACTCGTAGT 57.004 50.000 9.46 0.00 0.00 2.73
920 1724 2.831333 TCACCGGATAGACTCGTAGTC 58.169 52.381 9.46 6.85 45.38 2.59
993 3059 2.830827 CCGCACCACAACCAACCA 60.831 61.111 0.00 0.00 0.00 3.67
1626 3692 0.606096 TCACGGATGTGTACAGGGTG 59.394 55.000 0.00 0.66 46.49 4.61
1647 3713 1.170919 TCTACGCGGATAGGCTGGTC 61.171 60.000 12.47 0.00 0.00 4.02
1737 3803 4.215827 GTGGAGAATCTGATGGATTGCATC 59.784 45.833 10.92 10.92 43.90 3.91
1770 3836 1.282157 GGATACAGGGAGGCACAGTTT 59.718 52.381 0.00 0.00 0.00 2.66
1933 3999 5.010112 AGTGCACGCTGATACAATAGTAGAT 59.990 40.000 12.01 0.00 32.86 1.98
2101 4175 0.796312 CACGTCCATGTGTTACTGCC 59.204 55.000 0.00 0.00 35.12 4.85
2108 4182 3.758023 TCCATGTGTTACTGCCATTCTTG 59.242 43.478 0.00 0.00 0.00 3.02
2117 4191 3.614092 ACTGCCATTCTTGATGTACAGG 58.386 45.455 0.33 0.00 40.06 4.00
2120 4194 2.301346 CCATTCTTGATGTACAGGGGC 58.699 52.381 0.33 0.00 33.71 5.80
2124 4198 3.281727 TCTTGATGTACAGGGGCAATC 57.718 47.619 0.33 0.00 0.00 2.67
2205 4287 3.761481 GCATATGCGATTGTCAGGC 57.239 52.632 12.82 0.00 0.00 4.85
2240 4338 8.768501 ATCAGTACTTCTATCCACATGTAAGA 57.231 34.615 10.10 5.63 0.00 2.10
2241 4339 8.226819 TCAGTACTTCTATCCACATGTAAGAG 57.773 38.462 10.10 3.77 0.00 2.85
2249 4347 3.261580 TCCACATGTAAGAGTTGATGCG 58.738 45.455 0.00 0.00 0.00 4.73
2327 4425 2.867624 TGAAGACTTGAAGCAATGCCT 58.132 42.857 0.00 0.00 0.00 4.75
2594 4693 3.498774 AGATGCATGTTGATAGGGACC 57.501 47.619 2.46 0.00 0.00 4.46
2795 4894 3.005684 CACATGCCAAACAGTACCACAAT 59.994 43.478 0.00 0.00 0.00 2.71
2830 4929 3.495100 CCTGCTCTACGCCTATTCCATTT 60.495 47.826 0.00 0.00 38.05 2.32
2990 5094 3.114606 TGATCAAATCAGGTCTAGGGCA 58.885 45.455 0.00 0.00 33.59 5.36
3040 5144 2.719739 ACCAGTGCCATCTCAGATTTG 58.280 47.619 0.00 0.00 0.00 2.32
3078 5293 3.201353 ACGCTCTCTCTCATACTAGCA 57.799 47.619 0.00 0.00 0.00 3.49
3110 5325 2.159379 GGCCAATGTTCAGGAAATCGTC 60.159 50.000 0.00 0.00 0.00 4.20
3129 5344 3.725490 GTCAACTGGTAACTTCTCGGTT 58.275 45.455 0.00 0.00 37.61 4.44
3153 5368 8.654094 GTTAACTGGCTATTAGGGGATTAGTAA 58.346 37.037 0.00 0.00 0.00 2.24
3182 5397 4.935205 TCGGCCAATTAATCGGATGATAAG 59.065 41.667 2.24 0.00 33.40 1.73
3263 5479 6.915300 TGATTTATTGGCCGATATTTTGAACG 59.085 34.615 13.75 0.00 0.00 3.95
3268 5484 1.452717 CCGATATTTTGAACGCGTGC 58.547 50.000 14.98 13.04 0.00 5.34
3397 5630 0.458260 TGCCAGCATCATGTTGCATC 59.542 50.000 26.26 16.14 45.23 3.91
3438 5671 3.130280 TGAGCAGAGCATTGAACAAGA 57.870 42.857 0.00 0.00 0.00 3.02
3462 5695 4.821805 GCAGTTTTGCTATATGGCTAGGAA 59.178 41.667 12.66 0.00 46.95 3.36
3515 5755 6.126409 TGTTCCAAAGTTAAAGGATCACAGT 58.874 36.000 0.00 0.00 0.00 3.55
3563 5803 5.357032 CCCGCTTATTTCTACACTTCCAATT 59.643 40.000 0.00 0.00 0.00 2.32
3661 5901 7.395190 TTTTGGGTAGATGTTCATCATTCTG 57.605 36.000 14.05 0.00 36.83 3.02
3662 5902 5.039920 TGGGTAGATGTTCATCATTCTGG 57.960 43.478 14.05 0.00 36.83 3.86
3749 5989 5.524511 TTCGGTAGATGTTCATCAAAACG 57.475 39.130 14.05 14.46 31.58 3.60
3750 5990 3.369756 TCGGTAGATGTTCATCAAAACGC 59.630 43.478 14.05 4.53 31.58 4.84
3751 5991 3.370978 CGGTAGATGTTCATCAAAACGCT 59.629 43.478 14.05 0.00 31.58 5.07
3752 5992 4.492570 CGGTAGATGTTCATCAAAACGCTC 60.493 45.833 14.05 0.00 31.58 5.03
3756 5996 6.992063 AGATGTTCATCAAAACGCTCTTAT 57.008 33.333 14.05 0.00 31.58 1.73
3759 5999 8.607459 AGATGTTCATCAAAACGCTCTTATAAG 58.393 33.333 14.05 6.11 31.58 1.73
3761 6001 7.518161 TGTTCATCAAAACGCTCTTATAAGTG 58.482 34.615 12.19 10.87 31.58 3.16
3762 6002 6.106877 TCATCAAAACGCTCTTATAAGTGC 57.893 37.500 23.49 23.49 40.94 4.40
3763 6003 5.641636 TCATCAAAACGCTCTTATAAGTGCA 59.358 36.000 29.19 15.40 43.64 4.57
3764 6004 5.530519 TCAAAACGCTCTTATAAGTGCAG 57.469 39.130 29.19 24.20 43.64 4.41
3765 6005 4.994852 TCAAAACGCTCTTATAAGTGCAGT 59.005 37.500 29.19 24.67 43.64 4.40
3766 6006 5.468746 TCAAAACGCTCTTATAAGTGCAGTT 59.531 36.000 29.19 27.37 43.64 3.16
3767 6007 5.941948 AAACGCTCTTATAAGTGCAGTTT 57.058 34.783 30.19 30.19 43.64 2.66
3768 6008 5.941948 AACGCTCTTATAAGTGCAGTTTT 57.058 34.783 29.19 17.62 43.64 2.43
3769 6009 5.283060 ACGCTCTTATAAGTGCAGTTTTG 57.717 39.130 29.19 18.44 43.64 2.44
3770 6010 8.671986 AAAACGCTCTTATAAGTGCAGTTTTGC 61.672 37.037 35.50 20.38 45.70 3.68
3787 6027 8.854312 GCAGTTTTGCTATTTTAGATCACTTTC 58.146 33.333 0.00 0.00 46.95 2.62
3789 6029 7.750903 AGTTTTGCTATTTTAGATCACTTTCGC 59.249 33.333 0.00 0.00 0.00 4.70
3790 6030 5.734855 TGCTATTTTAGATCACTTTCGCC 57.265 39.130 0.00 0.00 0.00 5.54
3791 6031 4.574828 TGCTATTTTAGATCACTTTCGCCC 59.425 41.667 0.00 0.00 0.00 6.13
3793 6033 5.277538 GCTATTTTAGATCACTTTCGCCCTG 60.278 44.000 0.00 0.00 0.00 4.45
3794 6034 2.024176 TTAGATCACTTTCGCCCTGC 57.976 50.000 0.00 0.00 0.00 4.85
3795 6035 0.901827 TAGATCACTTTCGCCCTGCA 59.098 50.000 0.00 0.00 0.00 4.41
3796 6036 0.254178 AGATCACTTTCGCCCTGCAT 59.746 50.000 0.00 0.00 0.00 3.96
3798 6038 2.105477 AGATCACTTTCGCCCTGCATAT 59.895 45.455 0.00 0.00 0.00 1.78
3799 6039 2.418368 TCACTTTCGCCCTGCATATT 57.582 45.000 0.00 0.00 0.00 1.28
3801 6041 3.088532 TCACTTTCGCCCTGCATATTTT 58.911 40.909 0.00 0.00 0.00 1.82
3803 6043 4.335315 TCACTTTCGCCCTGCATATTTTAG 59.665 41.667 0.00 0.00 0.00 1.85
3806 6046 5.239525 ACTTTCGCCCTGCATATTTTAGATC 59.760 40.000 0.00 0.00 0.00 2.75
3808 6048 5.738619 TCGCCCTGCATATTTTAGATCTA 57.261 39.130 0.00 0.00 0.00 1.98
3809 6049 6.109156 TCGCCCTGCATATTTTAGATCTAA 57.891 37.500 11.24 11.24 0.00 2.10
3810 6050 6.166279 TCGCCCTGCATATTTTAGATCTAAG 58.834 40.000 14.63 5.00 0.00 2.18
3811 6051 5.163814 CGCCCTGCATATTTTAGATCTAAGC 60.164 44.000 14.63 14.21 0.00 3.09
3812 6052 5.707298 GCCCTGCATATTTTAGATCTAAGCA 59.293 40.000 19.46 19.46 0.00 3.91
3813 6053 6.207417 GCCCTGCATATTTTAGATCTAAGCAA 59.793 38.462 20.44 12.72 0.00 3.91
3814 6054 7.574592 GCCCTGCATATTTTAGATCTAAGCAAG 60.575 40.741 20.44 16.30 0.00 4.01
3816 6056 7.206981 TGCATATTTTAGATCTAAGCAAGGC 57.793 36.000 18.75 17.47 0.00 4.35
3817 6057 7.000472 TGCATATTTTAGATCTAAGCAAGGCT 59.000 34.615 18.75 1.93 42.56 4.58
3842 7369 1.816224 ACACCGAACAAGTGCAGTTTT 59.184 42.857 3.38 2.89 38.87 2.43
3900 7427 1.125633 ATGCCCTGATCCAAATTGCC 58.874 50.000 0.00 0.00 0.00 4.52
4125 7820 9.558396 TCAAATTGATTTTAACTTTGCCTTCAT 57.442 25.926 0.00 0.00 0.00 2.57
4162 7857 2.372264 ACTTCATTTCCGCATGAGCAT 58.628 42.857 0.00 0.00 42.27 3.79
4163 7858 2.098607 ACTTCATTTCCGCATGAGCATG 59.901 45.455 6.11 6.11 42.27 4.06
4551 8537 4.511454 TGCGAGCTTATTCACCATGATTAC 59.489 41.667 0.00 0.00 0.00 1.89
4621 8607 1.191535 CCCAACGATACTGGAGTGGA 58.808 55.000 0.00 0.00 35.85 4.02
4622 8608 1.553248 CCCAACGATACTGGAGTGGAA 59.447 52.381 0.00 0.00 35.85 3.53
4623 8609 2.418746 CCCAACGATACTGGAGTGGAAG 60.419 54.545 0.00 0.00 35.85 3.46
4624 8610 2.233922 CCAACGATACTGGAGTGGAAGT 59.766 50.000 0.00 0.00 35.85 3.01
4625 8611 3.306780 CCAACGATACTGGAGTGGAAGTT 60.307 47.826 0.00 0.00 35.85 2.66
4626 8612 4.081862 CCAACGATACTGGAGTGGAAGTTA 60.082 45.833 0.00 0.00 35.85 2.24
4627 8613 4.985538 ACGATACTGGAGTGGAAGTTAG 57.014 45.455 0.00 0.00 0.00 2.34
4628 8614 3.700038 ACGATACTGGAGTGGAAGTTAGG 59.300 47.826 0.00 0.00 0.00 2.69
4629 8615 3.068307 CGATACTGGAGTGGAAGTTAGGG 59.932 52.174 0.00 0.00 0.00 3.53
4630 8616 0.984995 ACTGGAGTGGAAGTTAGGGC 59.015 55.000 0.00 0.00 0.00 5.19
4631 8617 1.280457 CTGGAGTGGAAGTTAGGGCT 58.720 55.000 0.00 0.00 0.00 5.19
4632 8618 0.984230 TGGAGTGGAAGTTAGGGCTG 59.016 55.000 0.00 0.00 0.00 4.85
4633 8619 0.253327 GGAGTGGAAGTTAGGGCTGG 59.747 60.000 0.00 0.00 0.00 4.85
4687 8673 1.742831 AGCGAGCAAACAAGTTTCACA 59.257 42.857 0.00 0.00 0.00 3.58
4731 8717 8.702438 CGCTAATTTTCAAAAGTTTGACATGAT 58.298 29.630 5.98 0.00 45.99 2.45
4777 8763 7.095187 CCACTAACAAAAGAGTTGCTAGTTAGG 60.095 40.741 0.18 0.00 38.98 2.69
4798 8784 0.397816 CAGCCTAGGGGTCTAGCACT 60.398 60.000 11.72 0.00 41.18 4.40
4863 8851 3.436243 CAAGAGACCCTAGAGTCAACCT 58.564 50.000 7.19 0.00 39.34 3.50
4945 8934 3.528905 TGGGATCATGGGATTCTTCTGTT 59.471 43.478 0.00 0.00 32.67 3.16
4958 8947 8.033038 GGGATTCTTCTGTTTTGTTTATTACCC 58.967 37.037 0.00 0.00 0.00 3.69
5069 9091 4.094146 TGAACATTCGCGAGCATAATGAAA 59.906 37.500 21.14 6.29 35.18 2.69
5290 9325 1.134946 GTATGCATCTGGTTGGTTGCC 59.865 52.381 0.19 0.00 34.20 4.52
5322 9357 7.063074 CCATCAAATCTGAGCAAAAGTTGATTC 59.937 37.037 5.84 0.00 33.21 2.52
5326 9361 4.314961 TCTGAGCAAAAGTTGATTCGCTA 58.685 39.130 0.00 0.00 31.54 4.26
5328 9363 5.238432 TCTGAGCAAAAGTTGATTCGCTAAA 59.762 36.000 0.00 0.00 31.54 1.85
5344 9379 4.094294 TCGCTAAATTGTCTACACATTGGC 59.906 41.667 5.73 5.73 30.55 4.52
5355 9390 1.001641 ACATTGGCCCAGAGCTCAC 60.002 57.895 17.77 1.84 43.05 3.51
5377 9412 3.303406 CAGCTGCAGTTCTTTTAAGCAC 58.697 45.455 16.64 0.00 33.08 4.40
5399 9434 0.668535 GTGCACTTGGTCAAAGGTCC 59.331 55.000 10.32 0.00 40.51 4.46
5438 9473 2.099756 AGGCACTGAAGCAAAAGAACAC 59.900 45.455 0.00 0.00 37.18 3.32
5440 9475 2.854185 GCACTGAAGCAAAAGAACACAC 59.146 45.455 0.00 0.00 0.00 3.82
5450 9485 3.933861 AAAGAACACACTTCTCACCCT 57.066 42.857 0.00 0.00 0.00 4.34
5479 9514 4.588528 AGCACCCAACAAATACAAGTCATT 59.411 37.500 0.00 0.00 0.00 2.57
5482 9517 6.073819 GCACCCAACAAATACAAGTCATTTTC 60.074 38.462 0.00 0.00 0.00 2.29
5486 9521 6.239572 CCAACAAATACAAGTCATTTTCCCCT 60.240 38.462 0.00 0.00 0.00 4.79
5487 9522 6.590234 ACAAATACAAGTCATTTTCCCCTC 57.410 37.500 0.00 0.00 0.00 4.30
5488 9523 6.314917 ACAAATACAAGTCATTTTCCCCTCT 58.685 36.000 0.00 0.00 0.00 3.69
5489 9524 6.782494 ACAAATACAAGTCATTTTCCCCTCTT 59.218 34.615 0.00 0.00 0.00 2.85
5490 9525 7.947890 ACAAATACAAGTCATTTTCCCCTCTTA 59.052 33.333 0.00 0.00 0.00 2.10
5491 9526 8.462016 CAAATACAAGTCATTTTCCCCTCTTAG 58.538 37.037 0.00 0.00 0.00 2.18
5492 9527 4.923415 ACAAGTCATTTTCCCCTCTTAGG 58.077 43.478 0.00 0.00 34.30 2.69
5493 9528 3.653835 AGTCATTTTCCCCTCTTAGGC 57.346 47.619 0.00 0.00 32.73 3.93
5494 9529 2.242452 AGTCATTTTCCCCTCTTAGGCC 59.758 50.000 0.00 0.00 32.73 5.19
5495 9530 1.569072 TCATTTTCCCCTCTTAGGCCC 59.431 52.381 0.00 0.00 32.73 5.80
5496 9531 0.551396 ATTTTCCCCTCTTAGGCCCG 59.449 55.000 0.00 0.00 32.73 6.13
5497 9532 2.206182 TTTTCCCCTCTTAGGCCCGC 62.206 60.000 0.00 0.00 32.73 6.13
5498 9533 3.635869 TTCCCCTCTTAGGCCCGCT 62.636 63.158 0.00 0.00 32.73 5.52
5499 9534 3.090532 CCCCTCTTAGGCCCGCTT 61.091 66.667 0.00 0.00 32.73 4.68
5500 9535 2.190578 CCCTCTTAGGCCCGCTTG 59.809 66.667 0.00 0.00 32.73 4.01
5501 9536 2.190578 CCTCTTAGGCCCGCTTGG 59.809 66.667 0.00 0.00 37.09 3.61
5502 9537 2.367202 CCTCTTAGGCCCGCTTGGA 61.367 63.158 0.00 0.00 35.39 3.53
5503 9538 1.602237 CTCTTAGGCCCGCTTGGAA 59.398 57.895 0.00 0.00 35.39 3.53
5504 9539 0.181350 CTCTTAGGCCCGCTTGGAAT 59.819 55.000 0.00 0.00 35.39 3.01
5505 9540 0.180406 TCTTAGGCCCGCTTGGAATC 59.820 55.000 0.00 0.00 35.39 2.52
5506 9541 1.153249 TTAGGCCCGCTTGGAATCG 60.153 57.895 0.00 0.00 35.39 3.34
5507 9542 2.602746 TTAGGCCCGCTTGGAATCGG 62.603 60.000 0.00 0.00 44.89 4.18
5508 9543 4.796495 GGCCCGCTTGGAATCGGT 62.796 66.667 0.00 0.00 43.87 4.69
5509 9544 3.508840 GCCCGCTTGGAATCGGTG 61.509 66.667 1.36 0.00 43.87 4.94
5510 9545 2.046314 CCCGCTTGGAATCGGTGT 60.046 61.111 1.36 0.00 43.87 4.16
5511 9546 1.219664 CCCGCTTGGAATCGGTGTA 59.780 57.895 1.36 0.00 43.87 2.90
5512 9547 0.179056 CCCGCTTGGAATCGGTGTAT 60.179 55.000 1.36 0.00 43.87 2.29
5513 9548 1.217882 CCGCTTGGAATCGGTGTATC 58.782 55.000 0.00 0.00 40.72 2.24
5514 9549 1.202533 CCGCTTGGAATCGGTGTATCT 60.203 52.381 0.00 0.00 40.72 1.98
5515 9550 2.550978 CGCTTGGAATCGGTGTATCTT 58.449 47.619 0.00 0.00 0.00 2.40
5516 9551 2.936498 CGCTTGGAATCGGTGTATCTTT 59.064 45.455 0.00 0.00 0.00 2.52
5517 9552 3.374058 CGCTTGGAATCGGTGTATCTTTT 59.626 43.478 0.00 0.00 0.00 2.27
5518 9553 4.142687 CGCTTGGAATCGGTGTATCTTTTT 60.143 41.667 0.00 0.00 0.00 1.94
5519 9554 5.064198 CGCTTGGAATCGGTGTATCTTTTTA 59.936 40.000 0.00 0.00 0.00 1.52
5520 9555 6.255950 GCTTGGAATCGGTGTATCTTTTTAC 58.744 40.000 0.00 0.00 0.00 2.01
5521 9556 6.128117 GCTTGGAATCGGTGTATCTTTTTACA 60.128 38.462 0.00 0.00 0.00 2.41
5554 9589 6.743575 ATTCTACAGTTGTATTTCACTGGC 57.256 37.500 4.44 0.00 33.10 4.85
5555 9590 5.483685 TCTACAGTTGTATTTCACTGGCT 57.516 39.130 4.44 0.00 33.10 4.75
5556 9591 5.237815 TCTACAGTTGTATTTCACTGGCTG 58.762 41.667 4.44 0.00 33.10 4.85
5557 9592 3.820557 ACAGTTGTATTTCACTGGCTGT 58.179 40.909 4.44 0.00 33.10 4.40
5558 9593 4.968259 ACAGTTGTATTTCACTGGCTGTA 58.032 39.130 0.00 0.00 34.64 2.74
5559 9594 5.560724 ACAGTTGTATTTCACTGGCTGTAT 58.439 37.500 0.00 0.00 34.64 2.29
5560 9595 5.412594 ACAGTTGTATTTCACTGGCTGTATG 59.587 40.000 0.00 0.00 34.64 2.39
5561 9596 5.412594 CAGTTGTATTTCACTGGCTGTATGT 59.587 40.000 0.00 0.00 0.00 2.29
5562 9597 5.412594 AGTTGTATTTCACTGGCTGTATGTG 59.587 40.000 0.00 0.00 0.00 3.21
5563 9598 5.159273 TGTATTTCACTGGCTGTATGTGA 57.841 39.130 0.00 0.00 38.71 3.58
5564 9599 5.744171 TGTATTTCACTGGCTGTATGTGAT 58.256 37.500 0.00 0.00 39.92 3.06
5565 9600 6.179756 TGTATTTCACTGGCTGTATGTGATT 58.820 36.000 0.00 0.00 39.92 2.57
5566 9601 6.658816 TGTATTTCACTGGCTGTATGTGATTT 59.341 34.615 0.00 0.00 39.92 2.17
5567 9602 6.594788 ATTTCACTGGCTGTATGTGATTTT 57.405 33.333 0.00 0.00 39.92 1.82
5568 9603 5.627499 TTCACTGGCTGTATGTGATTTTC 57.373 39.130 0.00 0.00 39.92 2.29
5569 9604 4.650734 TCACTGGCTGTATGTGATTTTCA 58.349 39.130 0.00 0.00 36.03 2.69
5570 9605 5.069318 TCACTGGCTGTATGTGATTTTCAA 58.931 37.500 0.00 0.00 36.03 2.69
5571 9606 5.048782 TCACTGGCTGTATGTGATTTTCAAC 60.049 40.000 0.00 0.00 36.03 3.18
5572 9607 5.048504 CACTGGCTGTATGTGATTTTCAACT 60.049 40.000 0.00 0.00 33.95 3.16
5573 9608 5.048504 ACTGGCTGTATGTGATTTTCAACTG 60.049 40.000 0.00 0.00 0.00 3.16
5574 9609 4.218200 TGGCTGTATGTGATTTTCAACTGG 59.782 41.667 0.00 0.00 0.00 4.00
5575 9610 4.380867 GGCTGTATGTGATTTTCAACTGGG 60.381 45.833 0.00 0.00 0.00 4.45
5576 9611 4.458989 GCTGTATGTGATTTTCAACTGGGA 59.541 41.667 0.00 0.00 0.00 4.37
5577 9612 5.048083 GCTGTATGTGATTTTCAACTGGGAA 60.048 40.000 0.00 0.00 0.00 3.97
5578 9613 6.516527 GCTGTATGTGATTTTCAACTGGGAAA 60.517 38.462 0.00 0.00 35.11 3.13
5579 9614 6.980593 TGTATGTGATTTTCAACTGGGAAAG 58.019 36.000 0.00 0.00 37.98 2.62
5580 9615 6.775142 TGTATGTGATTTTCAACTGGGAAAGA 59.225 34.615 0.00 0.00 37.98 2.52
5581 9616 6.729690 ATGTGATTTTCAACTGGGAAAGAA 57.270 33.333 0.00 0.00 37.98 2.52
5582 9617 6.147864 TGTGATTTTCAACTGGGAAAGAAG 57.852 37.500 0.00 0.00 37.98 2.85
5583 9618 5.890985 TGTGATTTTCAACTGGGAAAGAAGA 59.109 36.000 0.00 0.00 37.98 2.87
5584 9619 6.183360 TGTGATTTTCAACTGGGAAAGAAGAC 60.183 38.462 0.00 0.00 37.98 3.01
5585 9620 4.893424 TTTTCAACTGGGAAAGAAGACG 57.107 40.909 0.00 0.00 37.98 4.18
5586 9621 3.830744 TTCAACTGGGAAAGAAGACGA 57.169 42.857 0.00 0.00 0.00 4.20
5587 9622 3.107642 TCAACTGGGAAAGAAGACGAC 57.892 47.619 0.00 0.00 0.00 4.34
5588 9623 1.792949 CAACTGGGAAAGAAGACGACG 59.207 52.381 0.00 0.00 0.00 5.12
5589 9624 0.317479 ACTGGGAAAGAAGACGACGG 59.683 55.000 0.00 0.00 0.00 4.79
5590 9625 0.601558 CTGGGAAAGAAGACGACGGA 59.398 55.000 0.00 0.00 0.00 4.69
5591 9626 1.204941 CTGGGAAAGAAGACGACGGAT 59.795 52.381 0.00 0.00 0.00 4.18
5592 9627 1.067142 TGGGAAAGAAGACGACGGATG 60.067 52.381 0.00 0.00 0.00 3.51
5593 9628 1.641577 GGAAAGAAGACGACGGATGG 58.358 55.000 0.00 0.00 0.00 3.51
5594 9629 1.203994 GGAAAGAAGACGACGGATGGA 59.796 52.381 0.00 0.00 0.00 3.41
5595 9630 2.531206 GAAAGAAGACGACGGATGGAG 58.469 52.381 0.00 0.00 0.00 3.86
5596 9631 0.818296 AAGAAGACGACGGATGGAGG 59.182 55.000 0.00 0.00 0.00 4.30
5597 9632 0.323542 AGAAGACGACGGATGGAGGT 60.324 55.000 0.00 0.00 0.00 3.85
5598 9633 0.179134 GAAGACGACGGATGGAGGTG 60.179 60.000 0.00 0.00 0.00 4.00
5599 9634 0.898789 AAGACGACGGATGGAGGTGT 60.899 55.000 0.00 0.00 0.00 4.16
5600 9635 1.153823 GACGACGGATGGAGGTGTG 60.154 63.158 0.00 0.00 0.00 3.82
5601 9636 1.874345 GACGACGGATGGAGGTGTGT 61.874 60.000 0.00 0.00 0.00 3.72
5602 9637 0.609957 ACGACGGATGGAGGTGTGTA 60.610 55.000 0.00 0.00 0.00 2.90
5603 9638 0.744874 CGACGGATGGAGGTGTGTAT 59.255 55.000 0.00 0.00 0.00 2.29
5604 9639 1.269102 CGACGGATGGAGGTGTGTATC 60.269 57.143 0.00 0.00 0.00 2.24
5605 9640 2.032620 GACGGATGGAGGTGTGTATCT 58.967 52.381 0.00 0.00 0.00 1.98
5606 9641 2.431057 GACGGATGGAGGTGTGTATCTT 59.569 50.000 0.00 0.00 0.00 2.40
5607 9642 2.838202 ACGGATGGAGGTGTGTATCTTT 59.162 45.455 0.00 0.00 0.00 2.52
5608 9643 3.263425 ACGGATGGAGGTGTGTATCTTTT 59.737 43.478 0.00 0.00 0.00 2.27
5609 9644 4.468510 ACGGATGGAGGTGTGTATCTTTTA 59.531 41.667 0.00 0.00 0.00 1.52
5610 9645 4.809426 CGGATGGAGGTGTGTATCTTTTAC 59.191 45.833 0.00 0.00 0.00 2.01
5611 9646 5.625886 CGGATGGAGGTGTGTATCTTTTACA 60.626 44.000 0.00 0.00 0.00 2.41
5612 9647 5.817816 GGATGGAGGTGTGTATCTTTTACAG 59.182 44.000 0.00 0.00 0.00 2.74
5613 9648 5.160607 TGGAGGTGTGTATCTTTTACAGG 57.839 43.478 0.00 0.00 0.00 4.00
5614 9649 4.595781 TGGAGGTGTGTATCTTTTACAGGT 59.404 41.667 0.00 0.00 0.00 4.00
5615 9650 4.935808 GGAGGTGTGTATCTTTTACAGGTG 59.064 45.833 0.00 0.00 0.00 4.00
5616 9651 5.512576 GGAGGTGTGTATCTTTTACAGGTGT 60.513 44.000 0.00 0.00 0.00 4.16
5617 9652 6.295462 GGAGGTGTGTATCTTTTACAGGTGTA 60.295 42.308 0.00 0.00 0.00 2.90
5618 9653 7.069877 AGGTGTGTATCTTTTACAGGTGTAA 57.930 36.000 0.00 0.00 38.60 2.41
5619 9654 7.511268 AGGTGTGTATCTTTTACAGGTGTAAA 58.489 34.615 10.59 10.59 45.55 2.01
5626 9661 1.803334 TTACAGGTGTAAAGCGCTGG 58.197 50.000 12.58 0.00 37.54 4.85
5627 9662 0.970640 TACAGGTGTAAAGCGCTGGA 59.029 50.000 12.58 0.00 0.00 3.86
5628 9663 0.107831 ACAGGTGTAAAGCGCTGGAA 59.892 50.000 12.58 0.00 0.00 3.53
5629 9664 1.234821 CAGGTGTAAAGCGCTGGAAA 58.765 50.000 12.58 0.00 0.00 3.13
5630 9665 1.606668 CAGGTGTAAAGCGCTGGAAAA 59.393 47.619 12.58 0.00 0.00 2.29
5631 9666 1.607148 AGGTGTAAAGCGCTGGAAAAC 59.393 47.619 12.58 4.52 0.00 2.43
5632 9667 1.335496 GGTGTAAAGCGCTGGAAAACA 59.665 47.619 12.58 8.60 0.00 2.83
5633 9668 2.223618 GGTGTAAAGCGCTGGAAAACAA 60.224 45.455 12.58 0.00 0.00 2.83
5634 9669 2.787129 GTGTAAAGCGCTGGAAAACAAC 59.213 45.455 12.58 1.16 0.00 3.32
5635 9670 2.423892 TGTAAAGCGCTGGAAAACAACA 59.576 40.909 12.58 3.99 0.00 3.33
5636 9671 2.663826 AAAGCGCTGGAAAACAACAA 57.336 40.000 12.58 0.00 0.00 2.83
5637 9672 2.888834 AAGCGCTGGAAAACAACAAT 57.111 40.000 12.58 0.00 0.00 2.71
5638 9673 2.422276 AGCGCTGGAAAACAACAATC 57.578 45.000 10.39 0.00 0.00 2.67
5639 9674 1.000274 AGCGCTGGAAAACAACAATCC 60.000 47.619 10.39 0.00 0.00 3.01
5640 9675 1.269517 GCGCTGGAAAACAACAATCCA 60.270 47.619 0.00 0.00 40.84 3.41
5641 9676 2.801342 GCGCTGGAAAACAACAATCCAA 60.801 45.455 0.00 0.00 42.41 3.53
5642 9677 3.652274 CGCTGGAAAACAACAATCCAAT 58.348 40.909 0.00 0.00 42.41 3.16
5643 9678 3.674753 CGCTGGAAAACAACAATCCAATC 59.325 43.478 0.00 0.00 42.41 2.67
5644 9679 4.630111 GCTGGAAAACAACAATCCAATCA 58.370 39.130 0.00 0.00 42.41 2.57
5645 9680 5.240121 GCTGGAAAACAACAATCCAATCAT 58.760 37.500 0.00 0.00 42.41 2.45
5646 9681 5.121142 GCTGGAAAACAACAATCCAATCATG 59.879 40.000 0.00 0.00 42.41 3.07
5746 9781 6.037172 GCTATCTTTGTAATTTTCTCGAGCCA 59.963 38.462 7.81 0.00 0.00 4.75
5804 9867 7.390718 AGGTCTAGTAAAATCAACATTGTCACC 59.609 37.037 0.00 0.00 0.00 4.02
5807 9870 6.817765 AGTAAAATCAACATTGTCACCGAT 57.182 33.333 0.00 0.00 0.00 4.18
5838 9903 3.526931 TCTACATGGCTTCTGTGTAGC 57.473 47.619 0.00 0.00 43.02 3.58
5848 9913 5.017294 GCTTCTGTGTAGCCTCTAAAGAT 57.983 43.478 0.00 0.00 32.45 2.40
5849 9914 5.047188 GCTTCTGTGTAGCCTCTAAAGATC 58.953 45.833 0.00 0.00 32.45 2.75
6035 10100 6.834168 AACTGTTATGTGGGTAATGGAAAG 57.166 37.500 0.00 0.00 0.00 2.62
6038 10103 7.110155 ACTGTTATGTGGGTAATGGAAAGTAG 58.890 38.462 0.00 0.00 0.00 2.57
6042 10107 6.575244 ATGTGGGTAATGGAAAGTAGATCA 57.425 37.500 0.00 0.00 0.00 2.92
6045 10110 6.657541 TGTGGGTAATGGAAAGTAGATCAAAC 59.342 38.462 0.00 0.00 0.00 2.93
6173 10238 2.290323 ACTTACACCAGCCAATGAGTCC 60.290 50.000 0.00 0.00 0.00 3.85
6197 10262 0.599558 CATGGTGGGCTGTGTTTGAG 59.400 55.000 0.00 0.00 0.00 3.02
6377 10442 8.518430 TTGATCTTTGCCTGCTATTGTAATTA 57.482 30.769 0.00 0.00 0.00 1.40
6378 10443 8.696043 TGATCTTTGCCTGCTATTGTAATTAT 57.304 30.769 0.00 0.00 0.00 1.28
6382 10447 8.190122 TCTTTGCCTGCTATTGTAATTATTGTG 58.810 33.333 0.00 0.00 0.00 3.33
6422 10487 6.746364 GCTGAGCTCAGTTTTATCTCAAAATG 59.254 38.462 37.25 13.33 45.45 2.32
6510 10575 2.422832 GAGCTCCTTCAAAGGCTGATTG 59.577 50.000 0.87 0.00 46.06 2.67
6527 10592 7.761249 AGGCTGATTGAAAATAAGCACATAAAC 59.239 33.333 10.72 0.00 35.55 2.01
6567 10632 6.418057 TCCCATCCCATGTAAATTAATTGC 57.582 37.500 0.39 0.00 0.00 3.56
6594 10659 1.672145 GGTAACTCAGAAGCCCGTGAC 60.672 57.143 0.00 0.00 0.00 3.67
6607 10672 4.088421 GTGACGCCACGACTATGG 57.912 61.111 0.00 0.00 43.26 2.74
6613 10678 1.517832 GCCACGACTATGGTGCTCT 59.482 57.895 0.00 0.00 42.28 4.09
6615 10680 1.269309 GCCACGACTATGGTGCTCTAG 60.269 57.143 0.00 0.00 42.28 2.43
6646 10712 3.166434 TGGTTCGGGCTCAACCAT 58.834 55.556 14.37 0.00 46.88 3.55
6721 10814 7.626664 GCGGGTTGATTTGTATGTAATGTACAA 60.627 37.037 0.00 0.00 42.76 2.41
6770 10863 3.907894 TGATTTGTAAAAGTCCACGGC 57.092 42.857 0.00 0.00 0.00 5.68
6795 10888 8.240682 GCTGAACTGATATATCTCGATTGTAGT 58.759 37.037 13.79 3.66 0.00 2.73
6796 10889 9.767684 CTGAACTGATATATCTCGATTGTAGTC 57.232 37.037 13.79 2.65 0.00 2.59
6797 10890 9.508642 TGAACTGATATATCTCGATTGTAGTCT 57.491 33.333 13.79 0.00 0.00 3.24
6832 10925 2.873288 CTGCCGAGGAAAAGCAGC 59.127 61.111 0.00 0.00 46.60 5.25
6835 10928 2.873288 CCGAGGAAAAGCAGCAGC 59.127 61.111 0.00 0.00 42.56 5.25
6847 10940 1.427592 GCAGCAGCGCTTCCTAGAAG 61.428 60.000 7.50 0.00 36.40 2.85
6848 10941 0.809241 CAGCAGCGCTTCCTAGAAGG 60.809 60.000 7.50 0.00 36.40 3.46
6859 10954 4.742138 GCTTCCTAGAAGGATAACCAGCAG 60.742 50.000 10.36 0.00 45.34 4.24
6860 10955 3.995636 TCCTAGAAGGATAACCAGCAGT 58.004 45.455 0.00 0.00 40.06 4.40
6867 10962 6.116126 AGAAGGATAACCAGCAGTGTAAATC 58.884 40.000 0.00 0.00 38.94 2.17
6883 10978 0.731417 AATCGTTCTGCTGCATCTGC 59.269 50.000 1.31 0.00 42.50 4.26
6893 10992 2.196382 CTGCATCTGCTGTTTGCGCT 62.196 55.000 9.73 0.00 46.63 5.92
6924 11023 2.959357 GCAGAGCTTGCGTGGTGAC 61.959 63.158 5.35 0.00 44.09 3.67
6929 11028 0.882042 AGCTTGCGTGGTGACTTGAG 60.882 55.000 0.00 0.00 0.00 3.02
6930 11029 1.160329 GCTTGCGTGGTGACTTGAGT 61.160 55.000 0.00 0.00 0.00 3.41
6931 11030 1.872237 GCTTGCGTGGTGACTTGAGTA 60.872 52.381 0.00 0.00 0.00 2.59
6932 11031 1.792949 CTTGCGTGGTGACTTGAGTAC 59.207 52.381 0.00 0.00 0.00 2.73
6933 11032 0.318360 TGCGTGGTGACTTGAGTACG 60.318 55.000 0.00 0.00 34.93 3.67
6995 11094 3.327464 CCTTTGGATGGTGGGAAAATGTT 59.673 43.478 0.00 0.00 0.00 2.71
6997 11096 2.969628 TGGATGGTGGGAAAATGTTGT 58.030 42.857 0.00 0.00 0.00 3.32
6998 11097 4.119556 TGGATGGTGGGAAAATGTTGTA 57.880 40.909 0.00 0.00 0.00 2.41
7013 11112 3.859443 TGTTGTACAGTACGTTGGTGTT 58.141 40.909 6.23 0.00 0.00 3.32
7014 11113 3.617706 TGTTGTACAGTACGTTGGTGTTG 59.382 43.478 6.23 0.00 0.00 3.33
7034 11133 0.740149 CAGGCTGCAACTGTTTGTCA 59.260 50.000 0.00 0.00 34.90 3.58
7035 11134 1.338973 CAGGCTGCAACTGTTTGTCAT 59.661 47.619 0.00 0.00 34.90 3.06
7042 11141 5.168526 TGCAACTGTTTGTCATGAACTAC 57.831 39.130 0.00 0.00 34.90 2.73
7049 11148 3.394674 TTGTCATGAACTACCGAAGCA 57.605 42.857 0.00 0.00 0.00 3.91
7096 11195 3.655810 GACCGTCAGCTGGCTCTGG 62.656 68.421 17.70 12.93 34.91 3.86
7099 11198 4.385405 GTCAGCTGGCTCTGGCGT 62.385 66.667 12.09 0.00 39.81 5.68
7191 11301 4.011517 GACGCCCTCCGGTTCCAA 62.012 66.667 0.00 0.00 42.52 3.53
7210 11320 2.108278 AACGGGACTCGAACCAAGGG 62.108 60.000 0.00 0.00 42.43 3.95
7211 11321 2.580601 CGGGACTCGAACCAAGGGT 61.581 63.158 9.91 0.00 42.43 4.34
7234 11344 4.930696 TCCTTCACATAGTACAGGAGACA 58.069 43.478 0.00 0.00 0.00 3.41
7235 11345 4.950475 TCCTTCACATAGTACAGGAGACAG 59.050 45.833 0.00 0.00 0.00 3.51
7249 11359 2.035961 GGAGACAGTGTAGCAGTGACAA 59.964 50.000 10.50 0.00 38.11 3.18
7442 11577 3.486108 CGATAATATATTCGCGCTGTCCC 59.514 47.826 5.56 0.00 0.00 4.46
7499 11637 1.405463 CCACTGCAGAGCTACGTCATA 59.595 52.381 23.35 0.00 0.00 2.15
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 6.804677 TCACAAATCACAATGCTGTAGTTTT 58.195 32.000 0.00 0.00 33.22 2.43
120 131 5.475909 TCATCCAGTACGAAACAGTAAGACT 59.524 40.000 0.00 0.00 0.00 3.24
133 144 5.221441 TGTCCCAAATATCTCATCCAGTACG 60.221 44.000 0.00 0.00 0.00 3.67
148 159 2.307496 TGCTTGTCCATGTCCCAAAT 57.693 45.000 0.00 0.00 0.00 2.32
174 185 8.771766 ACTGTTAGTAAAGTTAAGTAAAGCTGC 58.228 33.333 0.00 0.00 0.00 5.25
196 207 3.841643 CCCGTTCGAAATACTACACTGT 58.158 45.455 0.00 0.00 0.00 3.55
197 208 2.601763 GCCCGTTCGAAATACTACACTG 59.398 50.000 0.00 0.00 0.00 3.66
199 210 2.609350 TGCCCGTTCGAAATACTACAC 58.391 47.619 0.00 0.00 0.00 2.90
200 211 3.316071 TTGCCCGTTCGAAATACTACA 57.684 42.857 0.00 0.00 0.00 2.74
201 212 3.545426 GCATTGCCCGTTCGAAATACTAC 60.545 47.826 0.00 0.00 0.00 2.73
202 213 2.610374 GCATTGCCCGTTCGAAATACTA 59.390 45.455 0.00 0.00 0.00 1.82
204 215 1.822581 GCATTGCCCGTTCGAAATAC 58.177 50.000 0.00 0.00 0.00 1.89
210 221 2.701006 CTACGCATTGCCCGTTCG 59.299 61.111 2.41 0.00 39.88 3.95
224 235 5.852738 ATCAAGATCACGCATTATGCTAC 57.147 39.130 15.54 2.39 42.25 3.58
298 309 1.531602 GCTGAACCAGGCAACCCTT 60.532 57.895 0.00 0.00 40.33 3.95
433 444 6.042322 TGTCCTCTTGCTAAGGTAGTTAACAA 59.958 38.462 8.61 0.00 35.29 2.83
521 532 5.258456 ACTGCTTGCTATTGAAATCATGG 57.742 39.130 0.00 0.00 0.00 3.66
598 623 0.740737 CACAAAGGCCGAATGATCCC 59.259 55.000 11.69 0.00 0.00 3.85
603 628 7.022055 TGTTATTATACACAAAGGCCGAATG 57.978 36.000 0.00 0.00 0.00 2.67
634 663 8.352942 GTGAGACAAGGATAAAGTTTCACAATT 58.647 33.333 9.63 0.00 43.10 2.32
644 673 6.401394 TCAGATGTGTGAGACAAGGATAAAG 58.599 40.000 0.00 0.00 38.36 1.85
678 707 1.077993 CCATTCCCCTGGTACCCAAAA 59.922 52.381 10.07 0.00 30.80 2.44
682 711 0.551396 CTTCCATTCCCCTGGTACCC 59.449 60.000 10.07 0.00 37.57 3.69
693 722 8.825667 TTTGGTTTAGTTTAATGCTTCCATTC 57.174 30.769 0.00 0.00 41.68 2.67
695 724 8.374743 ACATTTGGTTTAGTTTAATGCTTCCAT 58.625 29.630 0.00 0.00 31.15 3.41
731 760 8.575589 TGCTCAAAAATATGTGCTCTAGAAAAA 58.424 29.630 0.00 0.00 39.78 1.94
732 761 8.109705 TGCTCAAAAATATGTGCTCTAGAAAA 57.890 30.769 0.00 0.00 39.78 2.29
734 763 7.686438 TTGCTCAAAAATATGTGCTCTAGAA 57.314 32.000 0.00 0.00 39.78 2.10
735 764 7.870509 ATTGCTCAAAAATATGTGCTCTAGA 57.129 32.000 0.00 0.00 39.78 2.43
738 767 9.309516 CAATAATTGCTCAAAAATATGTGCTCT 57.690 29.630 3.47 0.00 39.78 4.09
739 768 9.090692 ACAATAATTGCTCAAAAATATGTGCTC 57.909 29.630 3.47 0.00 39.78 4.26
740 769 9.439500 AACAATAATTGCTCAAAAATATGTGCT 57.561 25.926 3.47 0.00 39.78 4.40
748 777 7.865385 AGCGTTCTAACAATAATTGCTCAAAAA 59.135 29.630 0.00 0.00 0.00 1.94
750 779 6.908825 AGCGTTCTAACAATAATTGCTCAAA 58.091 32.000 0.00 0.00 0.00 2.69
752 781 6.148645 TCAAGCGTTCTAACAATAATTGCTCA 59.851 34.615 0.00 0.00 0.00 4.26
755 784 7.740519 AATCAAGCGTTCTAACAATAATTGC 57.259 32.000 0.00 0.00 0.00 3.56
757 786 9.950680 CCATAATCAAGCGTTCTAACAATAATT 57.049 29.630 0.00 0.00 0.00 1.40
758 787 9.337396 TCCATAATCAAGCGTTCTAACAATAAT 57.663 29.630 0.00 0.00 0.00 1.28
761 790 7.336931 AGTTCCATAATCAAGCGTTCTAACAAT 59.663 33.333 0.00 0.00 0.00 2.71
765 794 6.170506 ACAGTTCCATAATCAAGCGTTCTAA 58.829 36.000 0.00 0.00 0.00 2.10
768 797 4.946784 ACAGTTCCATAATCAAGCGTTC 57.053 40.909 0.00 0.00 0.00 3.95
769 798 5.488341 AGTACAGTTCCATAATCAAGCGTT 58.512 37.500 0.00 0.00 0.00 4.84
780 1577 2.092914 GCCAAGCCTAGTACAGTTCCAT 60.093 50.000 0.00 0.00 0.00 3.41
784 1581 1.978580 ACAGCCAAGCCTAGTACAGTT 59.021 47.619 0.00 0.00 0.00 3.16
785 1582 1.276421 CACAGCCAAGCCTAGTACAGT 59.724 52.381 0.00 0.00 0.00 3.55
808 1605 6.563422 TCTAATGAAAATTATGTGGCACAGC 58.437 36.000 26.04 9.09 41.80 4.40
809 1606 8.028354 TGTTCTAATGAAAATTATGTGGCACAG 58.972 33.333 26.04 7.37 33.95 3.66
810 1607 7.890515 TGTTCTAATGAAAATTATGTGGCACA 58.109 30.769 24.36 24.36 33.52 4.57
811 1608 8.755696 TTGTTCTAATGAAAATTATGTGGCAC 57.244 30.769 11.55 11.55 33.52 5.01
812 1609 9.202273 GTTTGTTCTAATGAAAATTATGTGGCA 57.798 29.630 0.00 0.00 33.52 4.92
813 1610 8.655970 GGTTTGTTCTAATGAAAATTATGTGGC 58.344 33.333 0.00 0.00 33.52 5.01
814 1611 8.859156 CGGTTTGTTCTAATGAAAATTATGTGG 58.141 33.333 0.00 0.00 33.52 4.17
815 1612 9.405587 ACGGTTTGTTCTAATGAAAATTATGTG 57.594 29.630 0.00 0.00 33.52 3.21
816 1613 9.405587 CACGGTTTGTTCTAATGAAAATTATGT 57.594 29.630 0.00 0.00 33.52 2.29
817 1614 8.372521 GCACGGTTTGTTCTAATGAAAATTATG 58.627 33.333 0.00 0.00 33.52 1.90
818 1615 7.544217 GGCACGGTTTGTTCTAATGAAAATTAT 59.456 33.333 0.00 0.00 33.52 1.28
819 1616 6.864165 GGCACGGTTTGTTCTAATGAAAATTA 59.136 34.615 0.00 0.00 33.52 1.40
820 1617 5.694458 GGCACGGTTTGTTCTAATGAAAATT 59.306 36.000 0.00 0.00 33.52 1.82
821 1618 5.221342 TGGCACGGTTTGTTCTAATGAAAAT 60.221 36.000 0.00 0.00 33.52 1.82
822 1619 4.098044 TGGCACGGTTTGTTCTAATGAAAA 59.902 37.500 0.00 0.00 33.52 2.29
823 1620 3.632604 TGGCACGGTTTGTTCTAATGAAA 59.367 39.130 0.00 0.00 33.52 2.69
824 1621 3.215151 TGGCACGGTTTGTTCTAATGAA 58.785 40.909 0.00 0.00 0.00 2.57
825 1622 2.852449 TGGCACGGTTTGTTCTAATGA 58.148 42.857 0.00 0.00 0.00 2.57
826 1623 3.057596 ACATGGCACGGTTTGTTCTAATG 60.058 43.478 0.00 0.00 0.00 1.90
827 1624 3.153919 ACATGGCACGGTTTGTTCTAAT 58.846 40.909 0.00 0.00 0.00 1.73
828 1625 2.550606 GACATGGCACGGTTTGTTCTAA 59.449 45.455 0.00 0.00 0.00 2.10
829 1626 2.147958 GACATGGCACGGTTTGTTCTA 58.852 47.619 0.00 0.00 0.00 2.10
830 1627 0.951558 GACATGGCACGGTTTGTTCT 59.048 50.000 0.00 0.00 0.00 3.01
831 1628 0.665835 TGACATGGCACGGTTTGTTC 59.334 50.000 0.00 0.00 0.00 3.18
832 1629 0.667993 CTGACATGGCACGGTTTGTT 59.332 50.000 0.00 0.00 0.00 2.83
833 1630 0.179032 TCTGACATGGCACGGTTTGT 60.179 50.000 0.00 0.00 0.00 2.83
834 1631 0.518636 CTCTGACATGGCACGGTTTG 59.481 55.000 0.00 0.00 0.00 2.93
835 1632 0.396435 TCTCTGACATGGCACGGTTT 59.604 50.000 0.00 0.00 0.00 3.27
836 1633 0.320771 GTCTCTGACATGGCACGGTT 60.321 55.000 0.00 0.00 32.09 4.44
837 1634 1.293498 GTCTCTGACATGGCACGGT 59.707 57.895 0.00 0.00 32.09 4.83
838 1635 1.016130 GTGTCTCTGACATGGCACGG 61.016 60.000 0.00 0.00 44.63 4.94
841 1638 1.001293 GTCTGTGTCTCTGACATGGCA 59.999 52.381 0.00 0.00 44.63 4.92
853 1650 0.603975 GAAGCCCCACAGTCTGTGTC 60.604 60.000 27.20 16.12 46.45 3.67
881 1678 1.779061 AAGCCCCACTGTCCGACATT 61.779 55.000 0.62 0.00 0.00 2.71
882 1679 2.185310 GAAGCCCCACTGTCCGACAT 62.185 60.000 0.62 0.00 0.00 3.06
883 1680 2.847234 AAGCCCCACTGTCCGACA 60.847 61.111 0.29 0.29 0.00 4.35
886 1683 2.358737 GTGAAGCCCCACTGTCCG 60.359 66.667 0.00 0.00 34.38 4.79
887 1684 2.034221 GGTGAAGCCCCACTGTCC 59.966 66.667 6.12 0.00 37.24 4.02
902 1706 1.137872 ACGACTACGAGTCTATCCGGT 59.862 52.381 0.00 0.00 42.92 5.28
920 1724 1.599667 CCGGATGGTGATTCGTCTACG 60.600 57.143 0.00 0.00 41.45 3.51
933 1737 0.523072 CTGCTTGTTTGACCGGATGG 59.477 55.000 9.46 0.00 42.84 3.51
934 1738 1.197721 GACTGCTTGTTTGACCGGATG 59.802 52.381 9.46 0.00 0.00 3.51
935 1739 1.523758 GACTGCTTGTTTGACCGGAT 58.476 50.000 9.46 0.00 0.00 4.18
936 1740 0.534203 GGACTGCTTGTTTGACCGGA 60.534 55.000 9.46 0.00 0.00 5.14
937 1741 0.817634 TGGACTGCTTGTTTGACCGG 60.818 55.000 0.00 0.00 0.00 5.28
1578 3644 1.218047 CCCCTCGTCGAGCATGAAA 59.782 57.895 17.02 0.00 0.00 2.69
1626 3692 0.318784 CCAGCCTATCCGCGTAGAAC 60.319 60.000 4.92 0.00 0.00 3.01
1647 3713 1.649664 CCTTCACGATCAGCTTCCAG 58.350 55.000 0.00 0.00 0.00 3.86
1683 3749 3.233355 GAACAGCTTCGACCCATGT 57.767 52.632 0.00 0.00 0.00 3.21
1737 3803 1.065928 GTATCCAGCCACGGTCTCG 59.934 63.158 0.00 0.00 43.02 4.04
1761 3827 1.967319 TCACCTTCTCAAACTGTGCC 58.033 50.000 0.00 0.00 0.00 5.01
1770 3836 1.118965 TGCCGGACTTCACCTTCTCA 61.119 55.000 5.05 0.00 0.00 3.27
1875 3941 2.947852 ACAGTAACGAGTTGCTAGCAG 58.052 47.619 18.45 8.87 33.77 4.24
1876 3942 4.398358 AGATACAGTAACGAGTTGCTAGCA 59.602 41.667 14.93 14.93 33.77 3.49
1877 3943 4.922719 AGATACAGTAACGAGTTGCTAGC 58.077 43.478 8.10 8.10 33.77 3.42
1880 3946 8.684520 ACTAAATAGATACAGTAACGAGTTGCT 58.315 33.333 0.75 0.75 35.92 3.91
1881 3947 8.853469 ACTAAATAGATACAGTAACGAGTTGC 57.147 34.615 0.00 0.00 0.00 4.17
1887 3953 8.744011 GCACTGAACTAAATAGATACAGTAACG 58.256 37.037 0.00 0.00 35.15 3.18
1957 4023 4.910195 TGCTCTAAATGATGTTGTCTGGT 58.090 39.130 0.00 0.00 0.00 4.00
1958 4024 5.821470 AGATGCTCTAAATGATGTTGTCTGG 59.179 40.000 0.00 0.00 0.00 3.86
2094 4168 5.185454 CCTGTACATCAAGAATGGCAGTAA 58.815 41.667 0.00 0.00 39.14 2.24
2101 4175 3.003394 TGCCCCTGTACATCAAGAATG 57.997 47.619 0.00 0.00 41.48 2.67
2108 4182 4.973168 TGATAAGATTGCCCCTGTACATC 58.027 43.478 0.00 0.00 0.00 3.06
2117 4191 3.887716 ACTGAATGCTGATAAGATTGCCC 59.112 43.478 0.00 0.00 0.00 5.36
2165 4247 4.153475 GCTTGCATGCTTTCAATTGTTCAT 59.847 37.500 20.33 2.56 0.00 2.57
2194 4276 5.991606 TGATAATCCTAAAGCCTGACAATCG 59.008 40.000 0.00 0.00 0.00 3.34
2202 4284 7.922699 AGAAGTACTGATAATCCTAAAGCCT 57.077 36.000 0.00 0.00 0.00 4.58
2249 4347 9.500785 AGGTTTACTACTTCGTATAGAGGATAC 57.499 37.037 0.00 0.00 37.63 2.24
2302 4400 5.119743 GGCATTGCTTCAAGTCTTCATTTTC 59.880 40.000 8.82 0.00 0.00 2.29
2398 4497 1.206578 CAGTTAGCGCCCAAACACG 59.793 57.895 17.04 6.74 0.00 4.49
2594 4693 6.941436 ACCTAGGGATTAGATAGAGTTACACG 59.059 42.308 14.81 0.00 0.00 4.49
2686 4785 7.497595 AGACATAAGAATAATGAGCACCGTTA 58.502 34.615 0.00 0.00 0.00 3.18
2718 4817 6.202188 GTGCTTTGTTCTGCTACTGTTAGTTA 59.798 38.462 0.00 0.00 0.00 2.24
2893 4997 3.525537 TCTGAACTGCTAGTTGCTATGC 58.474 45.455 6.31 0.00 38.80 3.14
2918 5022 9.569122 ACTCTATTACTCTTTTACCTTTTTGCA 57.431 29.630 0.00 0.00 0.00 4.08
3040 5144 9.351570 AGAGAGCGTAACATAAGTTTAGTTAAC 57.648 33.333 0.00 0.00 39.15 2.01
3058 5162 3.201353 TGCTAGTATGAGAGAGAGCGT 57.799 47.619 0.00 0.00 32.53 5.07
3078 5293 5.997129 CCTGAACATTGGCCTTAACAAAAAT 59.003 36.000 3.32 0.00 0.00 1.82
3110 5325 5.176958 CAGTTAACCGAGAAGTTACCAGTTG 59.823 44.000 0.88 0.00 32.05 3.16
3129 5344 8.014859 ACTTACTAATCCCCTAATAGCCAGTTA 58.985 37.037 0.00 0.00 0.00 2.24
3153 5368 2.878406 CCGATTAATTGGCCGATTCACT 59.122 45.455 22.04 7.82 0.00 3.41
3182 5397 2.098770 ACCGAGTAGCCGATTAACTGAC 59.901 50.000 0.00 0.00 0.00 3.51
3215 5430 6.640518 CAGTTAACTGACTGCTTAATCCCTA 58.359 40.000 28.17 0.00 46.59 3.53
3246 5462 0.375454 CGCGTTCAAAATATCGGCCA 59.625 50.000 2.24 0.00 0.00 5.36
3268 5484 8.902806 TGTGTTTAGATAATTCCAATGCCTTAG 58.097 33.333 0.00 0.00 0.00 2.18
3397 5630 1.642037 CGTCCAGCAAGCTCATGTGG 61.642 60.000 0.00 0.00 0.00 4.17
3515 5755 0.756442 AAGACTTGCAGCTTGGCCAA 60.756 50.000 19.25 19.25 0.00 4.52
3641 5881 5.041191 ACCAGAATGATGAACATCTACCC 57.959 43.478 14.50 3.69 39.69 3.69
3724 5964 6.853872 CGTTTTGATGAACATCTACCGAAAAA 59.146 34.615 14.50 9.30 38.60 1.94
3726 5966 5.615984 GCGTTTTGATGAACATCTACCGAAA 60.616 40.000 14.50 5.17 38.60 3.46
3728 5968 3.369756 GCGTTTTGATGAACATCTACCGA 59.630 43.478 14.50 0.00 38.60 4.69
3729 5969 3.370978 AGCGTTTTGATGAACATCTACCG 59.629 43.478 14.50 12.19 38.60 4.02
3730 5970 4.631813 AGAGCGTTTTGATGAACATCTACC 59.368 41.667 14.50 2.16 38.60 3.18
3731 5971 5.786401 AGAGCGTTTTGATGAACATCTAC 57.214 39.130 14.50 9.53 38.60 2.59
3732 5972 9.594478 TTATAAGAGCGTTTTGATGAACATCTA 57.406 29.630 14.50 5.74 38.60 1.98
3733 5973 6.992063 ATAAGAGCGTTTTGATGAACATCT 57.008 33.333 14.50 0.00 38.60 2.90
3737 5977 6.466097 GCACTTATAAGAGCGTTTTGATGAAC 59.534 38.462 19.38 0.00 33.20 3.18
3738 5978 6.148645 TGCACTTATAAGAGCGTTTTGATGAA 59.851 34.615 23.96 5.56 44.15 2.57
3739 5979 5.641636 TGCACTTATAAGAGCGTTTTGATGA 59.358 36.000 23.96 6.17 44.15 2.92
3740 5980 5.868257 TGCACTTATAAGAGCGTTTTGATG 58.132 37.500 23.96 8.63 44.15 3.07
3743 5983 5.283060 ACTGCACTTATAAGAGCGTTTTG 57.717 39.130 23.96 15.53 44.15 2.44
3744 5984 5.941948 AACTGCACTTATAAGAGCGTTTT 57.058 34.783 23.96 15.90 44.15 2.43
3746 5986 5.689819 CAAAACTGCACTTATAAGAGCGTT 58.310 37.500 23.96 24.18 44.15 4.84
3747 5987 4.378459 GCAAAACTGCACTTATAAGAGCGT 60.378 41.667 23.96 21.09 44.15 5.07
3748 5988 4.091424 GCAAAACTGCACTTATAAGAGCG 58.909 43.478 23.96 20.61 44.15 5.03
3749 5989 5.302357 AGCAAAACTGCACTTATAAGAGC 57.698 39.130 23.23 23.23 42.02 4.09
3750 5990 9.846248 AAAATAGCAAAACTGCACTTATAAGAG 57.154 29.630 19.38 12.29 37.25 2.85
3756 5996 9.008965 TGATCTAAAATAGCAAAACTGCACTTA 57.991 29.630 0.00 0.00 37.25 2.24
3759 5999 7.308435 AGTGATCTAAAATAGCAAAACTGCAC 58.692 34.615 0.00 0.00 37.25 4.57
3761 6001 8.748380 AAAGTGATCTAAAATAGCAAAACTGC 57.252 30.769 0.00 0.00 0.00 4.40
3762 6002 9.055248 CGAAAGTGATCTAAAATAGCAAAACTG 57.945 33.333 0.00 0.00 0.00 3.16
3763 6003 7.750903 GCGAAAGTGATCTAAAATAGCAAAACT 59.249 33.333 0.00 0.00 0.00 2.66
3764 6004 7.008357 GGCGAAAGTGATCTAAAATAGCAAAAC 59.992 37.037 0.00 0.00 0.00 2.43
3765 6005 7.027161 GGCGAAAGTGATCTAAAATAGCAAAA 58.973 34.615 0.00 0.00 0.00 2.44
3766 6006 6.404293 GGGCGAAAGTGATCTAAAATAGCAAA 60.404 38.462 0.00 0.00 0.00 3.68
3767 6007 5.065988 GGGCGAAAGTGATCTAAAATAGCAA 59.934 40.000 0.00 0.00 0.00 3.91
3768 6008 4.574828 GGGCGAAAGTGATCTAAAATAGCA 59.425 41.667 0.00 0.00 0.00 3.49
3769 6009 4.816925 AGGGCGAAAGTGATCTAAAATAGC 59.183 41.667 0.00 0.00 0.00 2.97
3770 6010 5.277538 GCAGGGCGAAAGTGATCTAAAATAG 60.278 44.000 0.00 0.00 0.00 1.73
3771 6011 4.574828 GCAGGGCGAAAGTGATCTAAAATA 59.425 41.667 0.00 0.00 0.00 1.40
3774 6014 2.290008 TGCAGGGCGAAAGTGATCTAAA 60.290 45.455 0.00 0.00 0.00 1.85
3775 6015 1.277842 TGCAGGGCGAAAGTGATCTAA 59.722 47.619 0.00 0.00 0.00 2.10
3776 6016 0.901827 TGCAGGGCGAAAGTGATCTA 59.098 50.000 0.00 0.00 0.00 1.98
3778 6018 1.953559 TATGCAGGGCGAAAGTGATC 58.046 50.000 0.00 0.00 0.00 2.92
3779 6019 2.645838 ATATGCAGGGCGAAAGTGAT 57.354 45.000 0.00 0.00 0.00 3.06
3780 6020 2.418368 AATATGCAGGGCGAAAGTGA 57.582 45.000 0.00 0.00 0.00 3.41
3781 6021 3.508744 AAAATATGCAGGGCGAAAGTG 57.491 42.857 0.00 0.00 0.00 3.16
3782 6022 4.523083 TCTAAAATATGCAGGGCGAAAGT 58.477 39.130 0.00 0.00 0.00 2.66
3783 6023 5.471456 AGATCTAAAATATGCAGGGCGAAAG 59.529 40.000 0.00 0.00 0.00 2.62
3784 6024 5.376625 AGATCTAAAATATGCAGGGCGAAA 58.623 37.500 0.00 0.00 0.00 3.46
3785 6025 4.973168 AGATCTAAAATATGCAGGGCGAA 58.027 39.130 0.00 0.00 0.00 4.70
3787 6027 5.163814 GCTTAGATCTAAAATATGCAGGGCG 60.164 44.000 15.85 1.64 0.00 6.13
3789 6029 7.094463 CCTTGCTTAGATCTAAAATATGCAGGG 60.094 40.741 26.36 26.36 39.07 4.45
3790 6030 7.574592 GCCTTGCTTAGATCTAAAATATGCAGG 60.575 40.741 20.10 20.10 33.03 4.85
3791 6031 7.174599 AGCCTTGCTTAGATCTAAAATATGCAG 59.825 37.037 19.59 13.53 33.89 4.41
3793 6033 7.446001 AGCCTTGCTTAGATCTAAAATATGC 57.554 36.000 15.85 14.74 33.89 3.14
3809 6049 0.685097 TCGGTGTAGAAAGCCTTGCT 59.315 50.000 0.00 0.00 42.56 3.91
3810 6050 1.197036 GTTCGGTGTAGAAAGCCTTGC 59.803 52.381 0.00 0.00 0.00 4.01
3811 6051 2.489971 TGTTCGGTGTAGAAAGCCTTG 58.510 47.619 0.00 0.00 0.00 3.61
3812 6052 2.922740 TGTTCGGTGTAGAAAGCCTT 57.077 45.000 0.00 0.00 0.00 4.35
3813 6053 2.104281 ACTTGTTCGGTGTAGAAAGCCT 59.896 45.455 0.00 0.00 0.00 4.58
3814 6054 2.223377 CACTTGTTCGGTGTAGAAAGCC 59.777 50.000 0.00 0.00 0.00 4.35
3816 6056 2.869801 TGCACTTGTTCGGTGTAGAAAG 59.130 45.455 0.00 0.00 37.07 2.62
3817 6057 2.869801 CTGCACTTGTTCGGTGTAGAAA 59.130 45.455 6.16 0.00 45.60 2.52
3818 6058 2.159014 ACTGCACTTGTTCGGTGTAGAA 60.159 45.455 16.16 0.00 45.60 2.10
3819 6059 1.411246 ACTGCACTTGTTCGGTGTAGA 59.589 47.619 16.16 0.00 45.60 2.59
3822 6062 1.459450 AAACTGCACTTGTTCGGTGT 58.541 45.000 0.00 0.00 37.07 4.16
3842 7369 1.139439 TTGCTCCCAGCCATATAGCA 58.861 50.000 0.00 0.00 41.51 3.49
3900 7427 5.356751 TGGTCAATGGTGATCCTTTAATTCG 59.643 40.000 0.00 0.00 33.52 3.34
4011 7538 7.958088 TCCCAACGATCTCATACATGTAATAA 58.042 34.615 10.14 0.00 0.00 1.40
4014 7541 5.362717 ACTCCCAACGATCTCATACATGTAA 59.637 40.000 10.14 0.00 0.00 2.41
4119 7814 9.829507 AAGTAGATCTCAGTAAATTCATGAAGG 57.170 33.333 14.54 0.00 0.00 3.46
4162 7857 4.599041 ACAAAGGTTATGATAGCCTTGCA 58.401 39.130 19.34 0.00 46.88 4.08
4163 7858 5.358160 AGAACAAAGGTTATGATAGCCTTGC 59.642 40.000 19.34 10.52 46.88 4.01
4164 7859 6.375455 ACAGAACAAAGGTTATGATAGCCTTG 59.625 38.462 19.34 15.29 46.88 3.61
4392 8378 8.162085 ACATGCATGATGATAAATACTTCCTCT 58.838 33.333 32.75 0.22 35.80 3.69
4453 8439 6.028368 CAGCTTGTCACAATCAGATTGATTC 58.972 40.000 26.94 16.13 43.03 2.52
4525 8511 1.667236 TGGTGAATAAGCTCGCATGG 58.333 50.000 0.00 0.00 0.00 3.66
4551 8537 8.355913 TCTACTAACTACATGCATGATGAGAAG 58.644 37.037 32.75 24.04 35.80 2.85
4731 8717 2.508300 GGGCTGATTTGAACTAGGGGTA 59.492 50.000 0.00 0.00 0.00 3.69
4777 8763 2.512355 GCTAGACCCCTAGGCTGGC 61.512 68.421 2.05 5.33 42.05 4.85
4790 8776 0.545309 AAGTGGGCTGGAGTGCTAGA 60.545 55.000 0.00 0.00 0.00 2.43
4945 8934 8.943594 ACAAGGACATTAGGGTAATAAACAAA 57.056 30.769 0.00 0.00 0.00 2.83
5069 9091 2.851263 TCAGCTCGGTTTGTTATGGT 57.149 45.000 0.00 0.00 0.00 3.55
5290 9325 3.889815 TGCTCAGATTTGATGGTTAGGG 58.110 45.455 0.00 0.00 31.68 3.53
5322 9357 4.342772 GCCAATGTGTAGACAATTTAGCG 58.657 43.478 0.00 0.00 35.11 4.26
5326 9361 3.505386 TGGGCCAATGTGTAGACAATTT 58.495 40.909 2.13 0.00 35.11 1.82
5328 9363 2.308570 TCTGGGCCAATGTGTAGACAAT 59.691 45.455 8.04 0.00 35.11 2.71
5355 9390 2.294233 TGCTTAAAAGAACTGCAGCTGG 59.706 45.455 17.12 1.57 0.00 4.85
5377 9412 0.029300 CCTTTGACCAAGTGCACGTG 59.971 55.000 23.76 23.76 0.00 4.49
5399 9434 2.744202 GCCTCACTGACATTGGTAGTTG 59.256 50.000 0.00 0.00 0.00 3.16
5438 9473 1.000938 GCTTGCAAAGGGTGAGAAGTG 60.001 52.381 0.00 0.00 46.35 3.16
5440 9475 1.000938 GTGCTTGCAAAGGGTGAGAAG 60.001 52.381 0.00 0.00 46.35 2.85
5450 9485 2.706339 ATTTGTTGGGTGCTTGCAAA 57.294 40.000 0.00 0.00 34.25 3.68
5479 9514 2.676265 GCGGGCCTAAGAGGGGAAA 61.676 63.158 0.84 0.00 35.37 3.13
5482 9517 3.090532 AAGCGGGCCTAAGAGGGG 61.091 66.667 0.84 0.00 35.37 4.79
5486 9521 0.180406 GATTCCAAGCGGGCCTAAGA 59.820 55.000 0.84 0.00 36.21 2.10
5487 9522 1.160329 CGATTCCAAGCGGGCCTAAG 61.160 60.000 0.84 0.00 36.21 2.18
5488 9523 1.153249 CGATTCCAAGCGGGCCTAA 60.153 57.895 0.84 0.00 36.21 2.69
5489 9524 2.504032 CGATTCCAAGCGGGCCTA 59.496 61.111 0.84 0.00 36.21 3.93
5495 9530 2.225068 AGATACACCGATTCCAAGCG 57.775 50.000 0.00 0.00 37.59 4.68
5496 9531 4.965119 AAAAGATACACCGATTCCAAGC 57.035 40.909 0.00 0.00 0.00 4.01
5497 9532 7.241376 GTGTAAAAAGATACACCGATTCCAAG 58.759 38.462 6.37 0.00 46.37 3.61
5498 9533 7.136289 GTGTAAAAAGATACACCGATTCCAA 57.864 36.000 6.37 0.00 46.37 3.53
5499 9534 6.730960 GTGTAAAAAGATACACCGATTCCA 57.269 37.500 6.37 0.00 46.37 3.53
5528 9563 8.726988 GCCAGTGAAATACAACTGTAGAATAAA 58.273 33.333 0.00 0.00 33.52 1.40
5529 9564 8.100791 AGCCAGTGAAATACAACTGTAGAATAA 58.899 33.333 0.00 0.00 33.52 1.40
5530 9565 7.549134 CAGCCAGTGAAATACAACTGTAGAATA 59.451 37.037 0.00 0.00 33.52 1.75
5531 9566 6.372659 CAGCCAGTGAAATACAACTGTAGAAT 59.627 38.462 0.00 0.00 33.52 2.40
5532 9567 5.700832 CAGCCAGTGAAATACAACTGTAGAA 59.299 40.000 0.00 0.00 33.52 2.10
5533 9568 5.221641 ACAGCCAGTGAAATACAACTGTAGA 60.222 40.000 0.00 0.00 37.26 2.59
5534 9569 4.997395 ACAGCCAGTGAAATACAACTGTAG 59.003 41.667 0.00 0.00 37.26 2.74
5535 9570 4.968259 ACAGCCAGTGAAATACAACTGTA 58.032 39.130 0.00 0.00 37.26 2.74
5536 9571 3.820557 ACAGCCAGTGAAATACAACTGT 58.179 40.909 0.00 0.00 35.47 3.55
5537 9572 5.412594 ACATACAGCCAGTGAAATACAACTG 59.587 40.000 0.00 0.00 34.11 3.16
5538 9573 5.412594 CACATACAGCCAGTGAAATACAACT 59.587 40.000 0.00 0.00 35.33 3.16
5539 9574 5.411361 TCACATACAGCCAGTGAAATACAAC 59.589 40.000 0.00 0.00 39.15 3.32
5540 9575 5.555966 TCACATACAGCCAGTGAAATACAA 58.444 37.500 0.00 0.00 39.15 2.41
5541 9576 5.159273 TCACATACAGCCAGTGAAATACA 57.841 39.130 0.00 0.00 39.15 2.29
5542 9577 6.683974 AATCACATACAGCCAGTGAAATAC 57.316 37.500 0.00 0.00 44.47 1.89
5543 9578 7.392953 TGAAAATCACATACAGCCAGTGAAATA 59.607 33.333 0.00 0.00 44.47 1.40
5544 9579 6.209192 TGAAAATCACATACAGCCAGTGAAAT 59.791 34.615 0.00 0.00 44.47 2.17
5545 9580 5.534278 TGAAAATCACATACAGCCAGTGAAA 59.466 36.000 0.00 0.00 44.47 2.69
5546 9581 5.069318 TGAAAATCACATACAGCCAGTGAA 58.931 37.500 0.00 0.00 44.47 3.18
5547 9582 4.650734 TGAAAATCACATACAGCCAGTGA 58.349 39.130 0.00 0.00 45.26 3.41
5548 9583 5.048504 AGTTGAAAATCACATACAGCCAGTG 60.049 40.000 0.00 0.00 34.67 3.66
5549 9584 5.048504 CAGTTGAAAATCACATACAGCCAGT 60.049 40.000 0.00 0.00 0.00 4.00
5550 9585 5.396484 CAGTTGAAAATCACATACAGCCAG 58.604 41.667 0.00 0.00 0.00 4.85
5551 9586 4.218200 CCAGTTGAAAATCACATACAGCCA 59.782 41.667 0.00 0.00 0.00 4.75
5552 9587 4.380867 CCCAGTTGAAAATCACATACAGCC 60.381 45.833 0.00 0.00 0.00 4.85
5553 9588 4.458989 TCCCAGTTGAAAATCACATACAGC 59.541 41.667 0.00 0.00 0.00 4.40
5554 9589 6.573664 TTCCCAGTTGAAAATCACATACAG 57.426 37.500 0.00 0.00 0.00 2.74
5555 9590 6.775142 TCTTTCCCAGTTGAAAATCACATACA 59.225 34.615 0.00 0.00 34.06 2.29
5556 9591 7.214467 TCTTTCCCAGTTGAAAATCACATAC 57.786 36.000 0.00 0.00 34.06 2.39
5557 9592 7.723616 TCTTCTTTCCCAGTTGAAAATCACATA 59.276 33.333 0.00 0.00 34.06 2.29
5558 9593 6.550854 TCTTCTTTCCCAGTTGAAAATCACAT 59.449 34.615 0.00 0.00 34.06 3.21
5559 9594 5.890985 TCTTCTTTCCCAGTTGAAAATCACA 59.109 36.000 0.00 0.00 34.06 3.58
5560 9595 6.209361 GTCTTCTTTCCCAGTTGAAAATCAC 58.791 40.000 0.00 0.00 34.06 3.06
5561 9596 5.008613 CGTCTTCTTTCCCAGTTGAAAATCA 59.991 40.000 0.00 0.00 34.06 2.57
5562 9597 5.238650 TCGTCTTCTTTCCCAGTTGAAAATC 59.761 40.000 0.00 0.00 34.06 2.17
5563 9598 5.008712 GTCGTCTTCTTTCCCAGTTGAAAAT 59.991 40.000 0.00 0.00 34.06 1.82
5564 9599 4.334481 GTCGTCTTCTTTCCCAGTTGAAAA 59.666 41.667 0.00 0.00 34.06 2.29
5565 9600 3.875134 GTCGTCTTCTTTCCCAGTTGAAA 59.125 43.478 0.00 0.00 33.42 2.69
5566 9601 3.463944 GTCGTCTTCTTTCCCAGTTGAA 58.536 45.455 0.00 0.00 0.00 2.69
5567 9602 2.545113 CGTCGTCTTCTTTCCCAGTTGA 60.545 50.000 0.00 0.00 0.00 3.18
5568 9603 1.792949 CGTCGTCTTCTTTCCCAGTTG 59.207 52.381 0.00 0.00 0.00 3.16
5569 9604 1.270147 CCGTCGTCTTCTTTCCCAGTT 60.270 52.381 0.00 0.00 0.00 3.16
5570 9605 0.317479 CCGTCGTCTTCTTTCCCAGT 59.683 55.000 0.00 0.00 0.00 4.00
5571 9606 0.601558 TCCGTCGTCTTCTTTCCCAG 59.398 55.000 0.00 0.00 0.00 4.45
5572 9607 1.067142 CATCCGTCGTCTTCTTTCCCA 60.067 52.381 0.00 0.00 0.00 4.37
5573 9608 1.641577 CATCCGTCGTCTTCTTTCCC 58.358 55.000 0.00 0.00 0.00 3.97
5574 9609 1.203994 TCCATCCGTCGTCTTCTTTCC 59.796 52.381 0.00 0.00 0.00 3.13
5575 9610 2.531206 CTCCATCCGTCGTCTTCTTTC 58.469 52.381 0.00 0.00 0.00 2.62
5576 9611 1.204941 CCTCCATCCGTCGTCTTCTTT 59.795 52.381 0.00 0.00 0.00 2.52
5577 9612 0.818296 CCTCCATCCGTCGTCTTCTT 59.182 55.000 0.00 0.00 0.00 2.52
5578 9613 0.323542 ACCTCCATCCGTCGTCTTCT 60.324 55.000 0.00 0.00 0.00 2.85
5579 9614 0.179134 CACCTCCATCCGTCGTCTTC 60.179 60.000 0.00 0.00 0.00 2.87
5580 9615 0.898789 ACACCTCCATCCGTCGTCTT 60.899 55.000 0.00 0.00 0.00 3.01
5581 9616 1.304217 ACACCTCCATCCGTCGTCT 60.304 57.895 0.00 0.00 0.00 4.18
5582 9617 1.153823 CACACCTCCATCCGTCGTC 60.154 63.158 0.00 0.00 0.00 4.20
5583 9618 0.609957 TACACACCTCCATCCGTCGT 60.610 55.000 0.00 0.00 0.00 4.34
5584 9619 0.744874 ATACACACCTCCATCCGTCG 59.255 55.000 0.00 0.00 0.00 5.12
5585 9620 2.032620 AGATACACACCTCCATCCGTC 58.967 52.381 0.00 0.00 0.00 4.79
5586 9621 2.160721 AGATACACACCTCCATCCGT 57.839 50.000 0.00 0.00 0.00 4.69
5587 9622 3.543680 AAAGATACACACCTCCATCCG 57.456 47.619 0.00 0.00 0.00 4.18
5588 9623 5.741011 TGTAAAAGATACACACCTCCATCC 58.259 41.667 0.00 0.00 0.00 3.51
5589 9624 5.817816 CCTGTAAAAGATACACACCTCCATC 59.182 44.000 0.00 0.00 0.00 3.51
5590 9625 5.250774 ACCTGTAAAAGATACACACCTCCAT 59.749 40.000 0.00 0.00 0.00 3.41
5591 9626 4.595781 ACCTGTAAAAGATACACACCTCCA 59.404 41.667 0.00 0.00 0.00 3.86
5592 9627 4.935808 CACCTGTAAAAGATACACACCTCC 59.064 45.833 0.00 0.00 0.00 4.30
5593 9628 5.548406 ACACCTGTAAAAGATACACACCTC 58.452 41.667 0.00 0.00 0.00 3.85
5594 9629 5.562298 ACACCTGTAAAAGATACACACCT 57.438 39.130 0.00 0.00 0.00 4.00
5595 9630 7.572539 GCTTTACACCTGTAAAAGATACACACC 60.573 40.741 10.95 0.00 46.18 4.16
5596 9631 7.295930 GCTTTACACCTGTAAAAGATACACAC 58.704 38.462 10.95 0.00 46.18 3.82
5597 9632 6.146510 CGCTTTACACCTGTAAAAGATACACA 59.853 38.462 10.95 0.00 46.18 3.72
5598 9633 6.531439 CGCTTTACACCTGTAAAAGATACAC 58.469 40.000 10.95 0.00 46.18 2.90
5599 9634 5.121142 GCGCTTTACACCTGTAAAAGATACA 59.879 40.000 0.00 0.00 46.18 2.29
5600 9635 5.350640 AGCGCTTTACACCTGTAAAAGATAC 59.649 40.000 2.64 1.90 46.18 2.24
5601 9636 5.350365 CAGCGCTTTACACCTGTAAAAGATA 59.650 40.000 7.50 0.00 46.18 1.98
5602 9637 4.154195 CAGCGCTTTACACCTGTAAAAGAT 59.846 41.667 7.50 5.45 46.18 2.40
5603 9638 3.496884 CAGCGCTTTACACCTGTAAAAGA 59.503 43.478 7.50 0.00 46.18 2.52
5604 9639 3.364964 CCAGCGCTTTACACCTGTAAAAG 60.365 47.826 7.50 9.27 46.18 2.27
5605 9640 2.550606 CCAGCGCTTTACACCTGTAAAA 59.449 45.455 7.50 0.00 46.18 1.52
5606 9641 2.147958 CCAGCGCTTTACACCTGTAAA 58.852 47.619 7.50 9.68 45.18 2.01
5607 9642 1.345089 TCCAGCGCTTTACACCTGTAA 59.655 47.619 7.50 0.00 38.60 2.41
5608 9643 0.970640 TCCAGCGCTTTACACCTGTA 59.029 50.000 7.50 0.00 0.00 2.74
5609 9644 0.107831 TTCCAGCGCTTTACACCTGT 59.892 50.000 7.50 0.00 0.00 4.00
5610 9645 1.234821 TTTCCAGCGCTTTACACCTG 58.765 50.000 7.50 0.00 0.00 4.00
5611 9646 1.607148 GTTTTCCAGCGCTTTACACCT 59.393 47.619 7.50 0.00 0.00 4.00
5612 9647 1.335496 TGTTTTCCAGCGCTTTACACC 59.665 47.619 7.50 0.00 0.00 4.16
5613 9648 2.766970 TGTTTTCCAGCGCTTTACAC 57.233 45.000 7.50 1.39 0.00 2.90
5614 9649 2.423892 TGTTGTTTTCCAGCGCTTTACA 59.576 40.909 7.50 4.88 0.00 2.41
5615 9650 3.073144 TGTTGTTTTCCAGCGCTTTAC 57.927 42.857 7.50 1.92 0.00 2.01
5616 9651 3.784701 TTGTTGTTTTCCAGCGCTTTA 57.215 38.095 7.50 0.00 0.00 1.85
5617 9652 2.663826 TTGTTGTTTTCCAGCGCTTT 57.336 40.000 7.50 0.00 0.00 3.51
5618 9653 2.545742 GGATTGTTGTTTTCCAGCGCTT 60.546 45.455 7.50 0.00 0.00 4.68
5619 9654 1.000274 GGATTGTTGTTTTCCAGCGCT 60.000 47.619 2.64 2.64 0.00 5.92
5620 9655 1.269517 TGGATTGTTGTTTTCCAGCGC 60.270 47.619 0.00 0.00 34.65 5.92
5621 9656 2.791383 TGGATTGTTGTTTTCCAGCG 57.209 45.000 0.00 0.00 34.65 5.18
5622 9657 4.630111 TGATTGGATTGTTGTTTTCCAGC 58.370 39.130 0.00 0.00 40.48 4.85
5623 9658 5.640357 CCATGATTGGATTGTTGTTTTCCAG 59.360 40.000 0.00 0.00 46.92 3.86
5624 9659 5.549347 CCATGATTGGATTGTTGTTTTCCA 58.451 37.500 0.00 0.00 46.92 3.53
5625 9660 4.392754 GCCATGATTGGATTGTTGTTTTCC 59.607 41.667 0.00 0.00 46.92 3.13
5626 9661 4.392754 GGCCATGATTGGATTGTTGTTTTC 59.607 41.667 0.00 0.00 46.92 2.29
5627 9662 4.041938 AGGCCATGATTGGATTGTTGTTTT 59.958 37.500 5.01 0.00 46.92 2.43
5628 9663 3.583966 AGGCCATGATTGGATTGTTGTTT 59.416 39.130 5.01 0.00 46.92 2.83
5629 9664 3.175594 AGGCCATGATTGGATTGTTGTT 58.824 40.909 5.01 0.00 46.92 2.83
5630 9665 2.823959 AGGCCATGATTGGATTGTTGT 58.176 42.857 5.01 0.00 46.92 3.32
5631 9666 3.899052 AAGGCCATGATTGGATTGTTG 57.101 42.857 5.01 0.00 46.92 3.33
5632 9667 4.202284 GCATAAGGCCATGATTGGATTGTT 60.202 41.667 5.01 0.00 46.92 2.83
5633 9668 3.322828 GCATAAGGCCATGATTGGATTGT 59.677 43.478 5.01 0.00 46.92 2.71
5634 9669 3.322541 TGCATAAGGCCATGATTGGATTG 59.677 43.478 5.01 0.00 46.92 2.67
5635 9670 3.322828 GTGCATAAGGCCATGATTGGATT 59.677 43.478 5.01 0.00 46.92 3.01
5636 9671 2.895404 GTGCATAAGGCCATGATTGGAT 59.105 45.455 5.01 0.00 46.92 3.41
5637 9672 2.091720 AGTGCATAAGGCCATGATTGGA 60.092 45.455 5.01 0.00 46.92 3.53
5638 9673 2.295349 GAGTGCATAAGGCCATGATTGG 59.705 50.000 5.01 0.00 46.66 3.16
5639 9674 2.953648 TGAGTGCATAAGGCCATGATTG 59.046 45.455 5.01 0.00 43.89 2.67
5640 9675 3.301794 TGAGTGCATAAGGCCATGATT 57.698 42.857 5.01 0.00 43.89 2.57
5641 9676 3.074094 AGATGAGTGCATAAGGCCATGAT 59.926 43.478 5.01 0.00 43.89 2.45
5642 9677 2.440627 AGATGAGTGCATAAGGCCATGA 59.559 45.455 5.01 0.00 43.89 3.07
5643 9678 2.552743 CAGATGAGTGCATAAGGCCATG 59.447 50.000 5.01 1.19 43.89 3.66
5644 9679 2.440627 TCAGATGAGTGCATAAGGCCAT 59.559 45.455 5.01 0.00 43.89 4.40
5645 9680 1.839354 TCAGATGAGTGCATAAGGCCA 59.161 47.619 5.01 0.00 43.89 5.36
5646 9681 2.627515 TCAGATGAGTGCATAAGGCC 57.372 50.000 0.00 0.00 43.89 5.19
5647 9682 4.439289 GGTTTTCAGATGAGTGCATAAGGC 60.439 45.833 0.00 0.00 45.13 4.35
5746 9781 7.581213 TTTGTCTTATTGTGATGAGTTTGGT 57.419 32.000 0.00 0.00 0.00 3.67
5804 9867 7.664082 AGCCATGTAGAAATGAATAGAATCG 57.336 36.000 0.00 0.00 0.00 3.34
5807 9870 8.049117 ACAGAAGCCATGTAGAAATGAATAGAA 58.951 33.333 0.00 0.00 0.00 2.10
5838 9903 4.689812 CCTGCATCGATTGATCTTTAGAGG 59.310 45.833 0.00 0.00 30.49 3.69
5848 9913 1.097232 CAAAGCCCTGCATCGATTGA 58.903 50.000 0.00 0.00 0.00 2.57
5849 9914 0.813184 ACAAAGCCCTGCATCGATTG 59.187 50.000 0.00 0.00 0.00 2.67
5959 10024 1.000396 AGCTGGTGCCCATTCTTCC 60.000 57.895 0.00 0.00 40.80 3.46
6035 10100 3.253188 TGCCAGTGCAAAGTTTGATCTAC 59.747 43.478 19.82 11.18 46.66 2.59
6038 10103 2.798976 TGCCAGTGCAAAGTTTGATC 57.201 45.000 19.82 10.48 46.66 2.92
6052 10117 8.674263 ATCAAGTAATAGAAGAAGATTGCCAG 57.326 34.615 0.00 0.00 0.00 4.85
6186 10251 1.457346 ATAGCCTGCTCAAACACAGC 58.543 50.000 0.00 0.00 37.40 4.40
6197 10262 4.314121 CACCTGAAGAGATAATAGCCTGC 58.686 47.826 0.00 0.00 0.00 4.85
6377 10442 4.877823 CAGCCATCACACTATGTACACAAT 59.122 41.667 0.00 0.00 0.00 2.71
6378 10443 4.020662 TCAGCCATCACACTATGTACACAA 60.021 41.667 0.00 0.00 0.00 3.33
6382 10447 3.126831 GCTCAGCCATCACACTATGTAC 58.873 50.000 0.00 0.00 0.00 2.90
6422 10487 3.691609 CACTTTATCCTCCAGAAACTGCC 59.308 47.826 0.00 0.00 0.00 4.85
6567 10632 1.996191 GCTTCTGAGTTACCTTCGCTG 59.004 52.381 0.00 0.00 0.00 5.18
6594 10659 1.878522 GAGCACCATAGTCGTGGCG 60.879 63.158 0.00 0.00 43.27 5.69
6606 10671 1.693627 TAGCTGTAGCCTAGAGCACC 58.306 55.000 21.42 0.00 46.54 5.01
6607 10672 3.802948 TTTAGCTGTAGCCTAGAGCAC 57.197 47.619 21.42 0.00 46.54 4.40
6613 10678 4.439057 CGAACCAATTTAGCTGTAGCCTA 58.561 43.478 0.00 0.00 43.38 3.93
6615 10680 2.354821 CCGAACCAATTTAGCTGTAGCC 59.645 50.000 0.00 0.00 43.38 3.93
6671 10760 0.532573 ATCACCGTCAGCAGATTCGT 59.467 50.000 0.00 0.00 0.00 3.85
6672 10761 1.202348 AGATCACCGTCAGCAGATTCG 60.202 52.381 0.00 0.00 0.00 3.34
6721 10814 7.761409 TGTTATATACGTCCTGTAACTTCGTT 58.239 34.615 14.47 0.00 36.44 3.85
6770 10863 9.767684 GACTACAATCGAGATATATCAGTTCAG 57.232 37.037 15.08 3.60 0.00 3.02
6795 10888 3.635836 CAGACATGAGACCAGCAGATAGA 59.364 47.826 0.00 0.00 0.00 1.98
6796 10889 3.799574 GCAGACATGAGACCAGCAGATAG 60.800 52.174 0.00 0.00 0.00 2.08
6797 10890 2.102084 GCAGACATGAGACCAGCAGATA 59.898 50.000 0.00 0.00 0.00 1.98
6798 10891 1.134461 GCAGACATGAGACCAGCAGAT 60.134 52.381 0.00 0.00 0.00 2.90
6802 10895 1.812922 CGGCAGACATGAGACCAGC 60.813 63.158 0.00 0.00 0.00 4.85
6840 10933 3.452627 ACACTGCTGGTTATCCTTCTAGG 59.547 47.826 0.00 0.00 36.46 3.02
6841 10934 4.744795 ACACTGCTGGTTATCCTTCTAG 57.255 45.455 0.00 0.00 34.23 2.43
6843 10936 5.499004 TTTACACTGCTGGTTATCCTTCT 57.501 39.130 0.00 0.00 34.23 2.85
6844 10937 5.006746 CGATTTACACTGCTGGTTATCCTTC 59.993 44.000 0.00 0.00 34.23 3.46
6847 10940 4.189231 ACGATTTACACTGCTGGTTATCC 58.811 43.478 0.00 0.00 0.00 2.59
6848 10941 5.581085 AGAACGATTTACACTGCTGGTTATC 59.419 40.000 0.00 0.00 0.00 1.75
6859 10954 3.372206 AGATGCAGCAGAACGATTTACAC 59.628 43.478 4.07 0.00 0.00 2.90
6860 10955 3.371898 CAGATGCAGCAGAACGATTTACA 59.628 43.478 4.07 0.00 0.00 2.41
6867 10962 1.296755 ACAGCAGATGCAGCAGAACG 61.297 55.000 4.07 0.00 45.16 3.95
6883 10978 2.135139 TCTGTAAGACAGCGCAAACAG 58.865 47.619 11.47 13.10 45.54 3.16
6919 11018 4.959596 TGATCTACGTACTCAAGTCACC 57.040 45.455 0.00 0.00 0.00 4.02
6921 11020 5.678871 GCCAATGATCTACGTACTCAAGTCA 60.679 44.000 7.07 0.45 0.00 3.41
6922 11021 4.740695 GCCAATGATCTACGTACTCAAGTC 59.259 45.833 7.07 0.00 0.00 3.01
6924 11023 3.731216 CGCCAATGATCTACGTACTCAAG 59.269 47.826 7.07 4.21 0.00 3.02
6929 11028 3.043586 CAGACGCCAATGATCTACGTAC 58.956 50.000 0.00 0.00 37.05 3.67
6930 11029 2.946990 TCAGACGCCAATGATCTACGTA 59.053 45.455 0.00 0.00 37.05 3.57
6931 11030 1.749063 TCAGACGCCAATGATCTACGT 59.251 47.619 0.00 0.00 40.11 3.57
6932 11031 2.389059 CTCAGACGCCAATGATCTACG 58.611 52.381 0.00 0.00 0.00 3.51
6933 11032 2.101582 ACCTCAGACGCCAATGATCTAC 59.898 50.000 0.00 0.00 0.00 2.59
6995 11094 2.203401 GCAACACCAACGTACTGTACA 58.797 47.619 17.35 0.00 0.00 2.90
6997 11096 2.475818 CTGCAACACCAACGTACTGTA 58.524 47.619 0.00 0.00 0.00 2.74
6998 11097 1.295792 CTGCAACACCAACGTACTGT 58.704 50.000 0.00 0.00 0.00 3.55
7014 11113 0.595825 GACAAACAGTTGCAGCCTGC 60.596 55.000 10.45 10.45 45.29 4.85
7034 11133 1.722011 CCGTTGCTTCGGTAGTTCAT 58.278 50.000 10.97 0.00 44.77 2.57
7035 11134 3.204505 CCGTTGCTTCGGTAGTTCA 57.795 52.632 10.97 0.00 44.77 3.18
7049 11148 3.997672 GGAGCTGCATATCTCCGTT 57.002 52.632 12.24 0.00 39.43 4.44
7054 11153 2.746359 GCCCGGAGCTGCATATCT 59.254 61.111 0.73 0.00 38.99 1.98
7096 11195 1.801913 ACGATCTCAACTCGCACGC 60.802 57.895 0.00 0.00 39.71 5.34
7097 11196 0.729478 ACACGATCTCAACTCGCACG 60.729 55.000 0.00 0.00 39.71 5.34
7098 11197 0.710567 CACACGATCTCAACTCGCAC 59.289 55.000 0.00 0.00 39.71 5.34
7099 11198 1.008875 GCACACGATCTCAACTCGCA 61.009 55.000 0.00 0.00 39.71 5.10
7189 11299 0.865769 CTTGGTTCGAGTCCCGTTTG 59.134 55.000 6.32 0.00 39.75 2.93
7191 11301 1.370064 CCTTGGTTCGAGTCCCGTT 59.630 57.895 6.32 0.00 39.75 4.44
7210 11320 5.185249 TGTCTCCTGTACTATGTGAAGGAAC 59.815 44.000 0.00 0.00 36.62 3.62
7211 11321 5.330233 TGTCTCCTGTACTATGTGAAGGAA 58.670 41.667 0.00 0.00 36.62 3.36
7212 11322 4.930696 TGTCTCCTGTACTATGTGAAGGA 58.069 43.478 0.00 0.00 35.73 3.36
7217 11327 5.449314 GCTACACTGTCTCCTGTACTATGTG 60.449 48.000 0.00 0.00 0.00 3.21
7218 11328 4.641094 GCTACACTGTCTCCTGTACTATGT 59.359 45.833 0.00 0.00 0.00 2.29
7222 11332 3.085533 CTGCTACACTGTCTCCTGTACT 58.914 50.000 0.00 0.00 0.00 2.73
7234 11344 5.237344 GTCATTTTCTTGTCACTGCTACACT 59.763 40.000 0.00 0.00 0.00 3.55
7235 11345 5.237344 AGTCATTTTCTTGTCACTGCTACAC 59.763 40.000 0.00 0.00 0.00 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.