Multiple sequence alignment - TraesCS7D01G169500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G169500 chr7D 100.000 4842 0 0 1 4842 120526275 120531116 0.000000e+00 8942.0
1 TraesCS7D01G169500 chr7D 95.000 40 2 0 3373 3412 457596127 457596166 4.050000e-06 63.9
2 TraesCS7D01G169500 chr7D 100.000 30 0 0 3380 3409 467673065 467673036 6.770000e-04 56.5
3 TraesCS7D01G169500 chr7A 92.835 1940 83 18 2067 3983 125469277 125471183 0.000000e+00 2761.0
4 TraesCS7D01G169500 chr7A 89.925 1866 127 22 225 2069 125467351 125469176 0.000000e+00 2348.0
5 TraesCS7D01G169500 chr7A 86.982 338 38 4 517 854 243644674 243645005 4.580000e-100 375.0
6 TraesCS7D01G169500 chr7A 94.340 159 4 3 64 222 125467221 125467374 6.260000e-59 239.0
7 TraesCS7D01G169500 chr7A 82.292 96 8 5 1499 1592 206943064 206943152 1.870000e-09 75.0
8 TraesCS7D01G169500 chr7B 91.221 1982 100 27 104 2069 82689173 82691096 0.000000e+00 2628.0
9 TraesCS7D01G169500 chr7B 93.776 1221 35 9 2067 3262 82691257 82692461 0.000000e+00 1796.0
10 TraesCS7D01G169500 chr7B 92.798 722 31 10 3260 3979 82692620 82693322 0.000000e+00 1026.0
11 TraesCS7D01G169500 chr7B 83.646 373 38 12 1603 1966 486731583 486731941 3.610000e-86 329.0
12 TraesCS7D01G169500 chr2D 85.257 1499 169 25 1588 3075 97274312 97275769 0.000000e+00 1496.0
13 TraesCS7D01G169500 chr2D 79.066 1156 178 29 1588 2732 44657247 44658349 0.000000e+00 736.0
14 TraesCS7D01G169500 chr2D 87.026 501 51 10 3495 3983 97275969 97276467 1.970000e-153 553.0
15 TraesCS7D01G169500 chr2D 75.791 1264 194 70 284 1501 97273116 97274313 1.980000e-148 536.0
16 TraesCS7D01G169500 chr2D 83.862 347 50 4 1159 1501 44656904 44657248 4.670000e-85 326.0
17 TraesCS7D01G169500 chr2D 90.000 90 8 1 124 213 97272911 97272999 1.100000e-21 115.0
18 TraesCS7D01G169500 chr2D 95.122 41 2 0 3421 3461 7652576 7652616 1.120000e-06 65.8
19 TraesCS7D01G169500 chr2A 84.179 1498 180 24 1588 3075 96072182 96073632 0.000000e+00 1400.0
20 TraesCS7D01G169500 chr2A 75.838 1432 203 79 124 1501 96070841 96072183 3.230000e-166 595.0
21 TraesCS7D01G169500 chr2A 84.404 436 56 8 3546 3970 96074073 96074507 7.500000e-113 418.0
22 TraesCS7D01G169500 chr2A 86.301 73 8 1 3983 4053 96074596 96074668 1.440000e-10 78.7
23 TraesCS7D01G169500 chr2B 83.670 1041 118 23 2061 3073 148402493 148403509 0.000000e+00 933.0
24 TraesCS7D01G169500 chr2B 76.831 1256 196 62 279 1501 148400791 148401984 1.910000e-173 619.0
25 TraesCS7D01G169500 chr2B 85.537 484 60 10 1588 2068 148401983 148402459 9.360000e-137 497.0
26 TraesCS7D01G169500 chr2B 84.941 425 49 10 3498 3912 148404059 148404478 2.700000e-112 416.0
27 TraesCS7D01G169500 chr2B 92.000 175 14 0 517 691 177546680 177546506 3.740000e-61 246.0
28 TraesCS7D01G169500 chr2B 89.474 95 9 1 761 854 177546516 177546422 8.510000e-23 119.0
29 TraesCS7D01G169500 chr4D 80.086 1160 174 24 1588 2737 493741848 493740736 0.000000e+00 809.0
30 TraesCS7D01G169500 chr3A 79.188 1158 183 29 1588 2732 739539041 739540153 0.000000e+00 750.0
31 TraesCS7D01G169500 chr3A 78.287 1156 185 25 1588 2732 210097537 210098637 0.000000e+00 684.0
32 TraesCS7D01G169500 chr3A 83.240 358 52 6 1159 1511 739538699 739539053 6.050000e-84 322.0
33 TraesCS7D01G169500 chr3A 82.997 347 51 5 1159 1501 210097196 210097538 1.690000e-79 307.0
34 TraesCS7D01G169500 chr3D 91.628 430 33 3 4413 4842 412077059 412077485 4.170000e-165 592.0
35 TraesCS7D01G169500 chr3D 89.767 430 42 2 4413 4842 412100390 412099963 2.550000e-152 549.0
36 TraesCS7D01G169500 chr3D 98.485 66 1 0 4341 4406 412100539 412100474 3.060000e-22 117.0
37 TraesCS7D01G169500 chr4B 81.325 498 62 11 2028 2515 455597121 455597597 4.580000e-100 375.0
38 TraesCS7D01G169500 chr4B 92.614 176 13 0 4667 4842 5841372 5841197 2.240000e-63 254.0
39 TraesCS7D01G169500 chr4B 83.417 199 10 7 4413 4606 5841967 5841787 3.880000e-36 163.0
40 TraesCS7D01G169500 chr4B 93.421 76 5 0 4338 4413 5842119 5842044 3.960000e-21 113.0
41 TraesCS7D01G169500 chr1A 86.471 340 35 8 517 854 315839916 315840246 3.560000e-96 363.0
42 TraesCS7D01G169500 chr1A 93.750 48 2 1 1551 1597 344476088 344476041 2.420000e-08 71.3
43 TraesCS7D01G169500 chr6D 83.511 376 38 12 1601 1966 14448479 14448840 3.610000e-86 329.0
44 TraesCS7D01G169500 chr6A 82.222 360 55 7 1157 1511 543494496 543494141 7.880000e-78 302.0
45 TraesCS7D01G169500 chr6A 93.333 45 3 0 3417 3461 393544552 393544596 3.130000e-07 67.6
46 TraesCS7D01G169500 chr6A 95.122 41 1 1 3420 3460 33260165 33260204 4.050000e-06 63.9
47 TraesCS7D01G169500 chr5A 93.814 194 12 0 4413 4606 687955118 687954925 4.740000e-75 292.0
48 TraesCS7D01G169500 chr5A 90.610 213 20 0 4630 4842 687954931 687954719 2.850000e-72 283.0
49 TraesCS7D01G169500 chr5A 88.764 89 8 2 4326 4413 687955281 687955194 1.840000e-19 108.0
50 TraesCS7D01G169500 chr3B 90.857 175 16 0 517 691 64502868 64503042 8.100000e-58 235.0
51 TraesCS7D01G169500 chr3B 88.889 90 9 1 761 849 64503032 64503121 5.120000e-20 110.0
52 TraesCS7D01G169500 chr5D 96.552 58 0 2 1543 1598 391374907 391374850 1.430000e-15 95.3
53 TraesCS7D01G169500 chr5D 97.674 43 0 1 1551 1592 319252177 319252135 6.720000e-09 73.1
54 TraesCS7D01G169500 chr5D 85.333 75 5 3 3394 3462 479455984 479456058 6.720000e-09 73.1
55 TraesCS7D01G169500 chr5D 96.970 33 1 0 3380 3412 69426524 69426556 6.770000e-04 56.5
56 TraesCS7D01G169500 chr5B 88.750 80 6 1 3382 3461 398069752 398069828 1.430000e-15 95.3
57 TraesCS7D01G169500 chr5B 85.149 101 6 5 1500 1598 471403544 471403451 1.430000e-15 95.3
58 TraesCS7D01G169500 chr6B 95.556 45 2 0 3417 3461 436805438 436805394 6.720000e-09 73.1
59 TraesCS7D01G169500 chr6B 81.915 94 10 4 3376 3462 503536414 503536321 6.720000e-09 73.1
60 TraesCS7D01G169500 chr6B 94.286 35 2 0 3378 3412 618126243 618126277 2.000000e-03 54.7
61 TraesCS7D01G169500 chr4A 97.674 43 0 1 1552 1593 581492555 581492513 6.720000e-09 73.1
62 TraesCS7D01G169500 chrUn 93.750 48 2 1 1551 1597 102825596 102825643 2.420000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G169500 chr7D 120526275 120531116 4841 False 8942.000000 8942 100.000000 1 4842 1 chr7D.!!$F1 4841
1 TraesCS7D01G169500 chr7A 125467221 125471183 3962 False 1782.666667 2761 92.366667 64 3983 3 chr7A.!!$F3 3919
2 TraesCS7D01G169500 chr7B 82689173 82693322 4149 False 1816.666667 2628 92.598333 104 3979 3 chr7B.!!$F2 3875
3 TraesCS7D01G169500 chr2D 97272911 97276467 3556 False 675.000000 1496 84.518500 124 3983 4 chr2D.!!$F3 3859
4 TraesCS7D01G169500 chr2D 44656904 44658349 1445 False 531.000000 736 81.464000 1159 2732 2 chr2D.!!$F2 1573
5 TraesCS7D01G169500 chr2A 96070841 96074668 3827 False 622.925000 1400 82.680500 124 4053 4 chr2A.!!$F1 3929
6 TraesCS7D01G169500 chr2B 148400791 148404478 3687 False 616.250000 933 82.744750 279 3912 4 chr2B.!!$F1 3633
7 TraesCS7D01G169500 chr4D 493740736 493741848 1112 True 809.000000 809 80.086000 1588 2737 1 chr4D.!!$R1 1149
8 TraesCS7D01G169500 chr3A 739538699 739540153 1454 False 536.000000 750 81.214000 1159 2732 2 chr3A.!!$F2 1573
9 TraesCS7D01G169500 chr3A 210097196 210098637 1441 False 495.500000 684 80.642000 1159 2732 2 chr3A.!!$F1 1573
10 TraesCS7D01G169500 chr3D 412099963 412100539 576 True 333.000000 549 94.126000 4341 4842 2 chr3D.!!$R1 501
11 TraesCS7D01G169500 chr5A 687954719 687955281 562 True 227.666667 292 91.062667 4326 4842 3 chr5A.!!$R1 516

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
986 1158 0.035176 TTTTGATTTGCAGGCAGGGC 59.965 50.000 0.00 0.00 0.00 5.19 F
1173 1345 0.321564 TAGCAGCAGCAATGGACGTT 60.322 50.000 3.17 0.00 45.49 3.99 F
1929 2117 0.739112 GGCTTCACTCGGCTTCTCTG 60.739 60.000 0.00 0.00 0.00 3.35 F
2154 2549 1.202114 TCCGACTTATTTACCGCGTGT 59.798 47.619 4.92 5.32 0.00 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2131 2526 2.164219 ACGCGGTAAATAAGTCGGAAGA 59.836 45.455 12.47 0.0 38.16 2.87 R
3014 3476 2.068837 TAACCAGCGTCTTGTAACCG 57.931 50.000 0.00 0.0 0.00 4.44 R
3739 4719 1.830477 GCTTCTCTCATCTGGACACCT 59.170 52.381 0.00 0.0 0.00 4.00 R
4056 5117 0.110373 GTTGTCGACGGTGGATTTGC 60.110 55.000 11.62 0.0 0.00 3.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 8.546597 AAAATTCCGGAAACATTTTTATCAGG 57.453 30.769 23.08 0.00 27.77 3.86
45 46 6.850752 ATTCCGGAAACATTTTTATCAGGT 57.149 33.333 23.08 0.00 0.00 4.00
46 47 6.658188 TTCCGGAAACATTTTTATCAGGTT 57.342 33.333 16.28 0.00 0.00 3.50
47 48 6.262193 TCCGGAAACATTTTTATCAGGTTC 57.738 37.500 0.00 0.00 0.00 3.62
48 49 5.770663 TCCGGAAACATTTTTATCAGGTTCA 59.229 36.000 0.00 0.00 0.00 3.18
49 50 6.435904 TCCGGAAACATTTTTATCAGGTTCAT 59.564 34.615 0.00 0.00 0.00 2.57
50 51 6.751888 CCGGAAACATTTTTATCAGGTTCATC 59.248 38.462 0.00 0.00 0.00 2.92
51 52 7.362920 CCGGAAACATTTTTATCAGGTTCATCT 60.363 37.037 0.00 0.00 0.00 2.90
52 53 7.698130 CGGAAACATTTTTATCAGGTTCATCTC 59.302 37.037 0.00 0.00 0.00 2.75
53 54 7.976175 GGAAACATTTTTATCAGGTTCATCTCC 59.024 37.037 0.00 0.00 0.00 3.71
54 55 8.421249 AAACATTTTTATCAGGTTCATCTCCA 57.579 30.769 0.00 0.00 0.00 3.86
55 56 8.421249 AACATTTTTATCAGGTTCATCTCCAA 57.579 30.769 0.00 0.00 0.00 3.53
56 57 7.830739 ACATTTTTATCAGGTTCATCTCCAAC 58.169 34.615 0.00 0.00 0.00 3.77
57 58 6.834168 TTTTTATCAGGTTCATCTCCAACC 57.166 37.500 0.00 0.00 43.38 3.77
58 59 5.512942 TTTATCAGGTTCATCTCCAACCA 57.487 39.130 4.48 0.00 45.20 3.67
59 60 3.641434 ATCAGGTTCATCTCCAACCAG 57.359 47.619 4.48 0.00 45.20 4.00
60 61 1.630369 TCAGGTTCATCTCCAACCAGG 59.370 52.381 4.48 0.00 45.20 4.45
61 62 1.352352 CAGGTTCATCTCCAACCAGGT 59.648 52.381 4.48 0.00 45.20 4.00
62 63 1.352352 AGGTTCATCTCCAACCAGGTG 59.648 52.381 0.00 0.00 45.20 4.00
63 64 1.073923 GGTTCATCTCCAACCAGGTGT 59.926 52.381 0.00 0.00 42.68 4.16
64 65 2.304761 GGTTCATCTCCAACCAGGTGTA 59.695 50.000 0.00 0.00 42.68 2.90
65 66 3.054361 GGTTCATCTCCAACCAGGTGTAT 60.054 47.826 0.00 0.00 42.68 2.29
66 67 4.192317 GTTCATCTCCAACCAGGTGTATC 58.808 47.826 0.00 0.00 39.02 2.24
67 68 3.449918 TCATCTCCAACCAGGTGTATCA 58.550 45.455 0.00 0.00 39.02 2.15
68 69 3.452264 TCATCTCCAACCAGGTGTATCAG 59.548 47.826 0.00 0.00 39.02 2.90
69 70 2.187958 TCTCCAACCAGGTGTATCAGG 58.812 52.381 0.00 0.00 39.02 3.86
111 112 4.398044 ACGGGCAATAGTTGTATTTTCCTG 59.602 41.667 0.00 0.00 34.29 3.86
161 162 0.907704 TAGGCCCACTTGTCATCGGT 60.908 55.000 0.00 0.00 0.00 4.69
197 243 1.635487 TCAGGTACGTGGTAGGTAGGT 59.365 52.381 15.15 0.00 0.00 3.08
198 244 1.747355 CAGGTACGTGGTAGGTAGGTG 59.253 57.143 7.69 0.00 0.00 4.00
199 245 1.635487 AGGTACGTGGTAGGTAGGTGA 59.365 52.381 0.00 0.00 0.00 4.02
200 246 2.019984 GGTACGTGGTAGGTAGGTGAG 58.980 57.143 0.00 0.00 0.00 3.51
201 247 2.019984 GTACGTGGTAGGTAGGTGAGG 58.980 57.143 0.00 0.00 0.00 3.86
202 248 0.700564 ACGTGGTAGGTAGGTGAGGA 59.299 55.000 0.00 0.00 0.00 3.71
203 249 1.076024 ACGTGGTAGGTAGGTGAGGAA 59.924 52.381 0.00 0.00 0.00 3.36
204 250 1.475682 CGTGGTAGGTAGGTGAGGAAC 59.524 57.143 0.00 0.00 0.00 3.62
205 251 1.475682 GTGGTAGGTAGGTGAGGAACG 59.524 57.143 0.00 0.00 0.00 3.95
206 252 0.459078 GGTAGGTAGGTGAGGAACGC 59.541 60.000 0.00 0.00 0.00 4.84
213 259 2.432628 GTGAGGAACGCCACTCCG 60.433 66.667 0.00 0.00 38.08 4.63
214 260 4.373116 TGAGGAACGCCACTCCGC 62.373 66.667 0.00 0.00 38.08 5.54
257 303 2.539081 GCCCCTCACCAACCTTCCT 61.539 63.158 0.00 0.00 0.00 3.36
258 304 2.081585 GCCCCTCACCAACCTTCCTT 62.082 60.000 0.00 0.00 0.00 3.36
275 321 2.813754 TCCTTCGTTCTGCAAATCCTTG 59.186 45.455 0.00 0.00 35.49 3.61
333 405 6.434018 AGAATATTCTTCTGTTCTGCAAGC 57.566 37.500 12.37 0.00 32.55 4.01
334 406 5.942236 AGAATATTCTTCTGTTCTGCAAGCA 59.058 36.000 12.37 0.00 32.55 3.91
335 407 6.432162 AGAATATTCTTCTGTTCTGCAAGCAA 59.568 34.615 12.37 0.00 32.55 3.91
336 408 3.976793 TTCTTCTGTTCTGCAAGCAAG 57.023 42.857 0.00 0.00 0.00 4.01
396 482 5.277683 CGTTCCTTGCTAGATTTCATCCATG 60.278 44.000 0.00 0.00 0.00 3.66
397 483 4.139786 TCCTTGCTAGATTTCATCCATGC 58.860 43.478 0.00 0.00 0.00 4.06
398 484 3.255149 CCTTGCTAGATTTCATCCATGCC 59.745 47.826 0.00 0.00 0.00 4.40
399 485 2.497138 TGCTAGATTTCATCCATGCCG 58.503 47.619 0.00 0.00 0.00 5.69
400 486 1.198637 GCTAGATTTCATCCATGCCGC 59.801 52.381 0.00 0.00 0.00 6.53
401 487 1.808945 CTAGATTTCATCCATGCCGCC 59.191 52.381 0.00 0.00 0.00 6.13
402 488 0.106569 AGATTTCATCCATGCCGCCA 60.107 50.000 0.00 0.00 0.00 5.69
425 511 0.758123 GCCCTCTCCCAGATTCTCTG 59.242 60.000 0.00 0.00 43.91 3.35
438 524 4.864334 CTCTGTCCGCCATGGCCC 62.864 72.222 30.79 18.67 37.80 5.80
687 837 5.392919 CGGCAGAGAAGATATCATAGACCAG 60.393 48.000 5.32 0.00 0.00 4.00
709 859 1.585267 CGTAATGCTGTTGCCTGCCA 61.585 55.000 0.00 0.00 38.71 4.92
725 875 3.304257 CCTGCCATGCATACGAATTTCTC 60.304 47.826 0.00 0.00 38.13 2.87
741 894 2.685017 TCCGTGCTCTGCCTCCAT 60.685 61.111 0.00 0.00 0.00 3.41
746 899 1.075305 TGCTCTGCCTCCATTTGCA 59.925 52.632 0.00 0.00 35.86 4.08
778 931 2.476534 TTAGTCCCGCGTCGGTGTTC 62.477 60.000 15.38 4.95 46.80 3.18
785 938 2.660552 CGTCGGTGTTCGCCACTT 60.661 61.111 3.32 0.00 43.94 3.16
786 943 2.654912 CGTCGGTGTTCGCCACTTC 61.655 63.158 3.32 0.00 43.94 3.01
795 952 2.933878 TTCGCCACTTCTTGCACCGT 62.934 55.000 0.00 0.00 0.00 4.83
801 958 4.196778 TTCTTGCACCGTGGGGCA 62.197 61.111 12.78 12.78 38.46 5.36
849 1006 1.009389 GTCAACGAGTTCGAGCAGGG 61.009 60.000 8.72 0.00 43.02 4.45
959 1131 2.554893 GGTCGTGTTTTTGGCCTAATGA 59.445 45.455 3.32 0.00 0.00 2.57
985 1157 1.338389 CCTTTTGATTTGCAGGCAGGG 60.338 52.381 0.00 0.00 0.00 4.45
986 1158 0.035176 TTTTGATTTGCAGGCAGGGC 59.965 50.000 0.00 0.00 0.00 5.19
987 1159 1.120184 TTTGATTTGCAGGCAGGGCA 61.120 50.000 0.00 0.00 40.00 5.36
988 1160 1.537814 TTGATTTGCAGGCAGGGCAG 61.538 55.000 0.00 0.00 43.05 4.85
989 1161 2.682494 ATTTGCAGGCAGGGCAGG 60.682 61.111 0.00 0.00 43.05 4.85
1155 1327 2.048597 CAAGCTCGTGCCGTGGTA 60.049 61.111 5.73 0.00 40.80 3.25
1170 1342 0.677731 TGGTAGCAGCAGCAATGGAC 60.678 55.000 3.17 0.00 45.49 4.02
1173 1345 0.321564 TAGCAGCAGCAATGGACGTT 60.322 50.000 3.17 0.00 45.49 3.99
1296 1473 4.100189 TCCAAGAAGCATAGAGGTTAGCTC 59.900 45.833 2.85 2.85 38.24 4.09
1332 1509 3.895232 TGCTTATGTCCAGAGGTTCTC 57.105 47.619 0.00 0.00 0.00 2.87
1333 1510 3.173151 TGCTTATGTCCAGAGGTTCTCA 58.827 45.455 0.00 0.00 32.06 3.27
1401 1578 5.012046 CACTGTATGCTTGGATGAGGGTATA 59.988 44.000 0.00 0.00 0.00 1.47
1477 1654 3.531262 AGTAAATGTCACGTTTTCCGC 57.469 42.857 0.00 0.00 41.42 5.54
1509 1686 5.394738 AGTGCTTAGCATATACTACCTCCA 58.605 41.667 11.03 0.00 41.91 3.86
1644 1825 1.852157 AGGGCAATGACAGGGACCA 60.852 57.895 4.00 0.00 0.00 4.02
1658 1839 4.264532 ACAGGGACCATTCCATTTGAAGAT 60.265 41.667 0.00 0.00 44.98 2.40
1929 2117 0.739112 GGCTTCACTCGGCTTCTCTG 60.739 60.000 0.00 0.00 0.00 3.35
1948 2136 7.624360 TCTCTGTTTACGCCAATATGAAAAT 57.376 32.000 0.00 0.00 0.00 1.82
2130 2525 1.550072 GCCCTGCAACCACAACATAAT 59.450 47.619 0.00 0.00 0.00 1.28
2131 2526 2.028203 GCCCTGCAACCACAACATAATT 60.028 45.455 0.00 0.00 0.00 1.40
2150 2545 5.729974 AATTCTTCCGACTTATTTACCGC 57.270 39.130 0.00 0.00 0.00 5.68
2151 2546 2.801063 TCTTCCGACTTATTTACCGCG 58.199 47.619 0.00 0.00 0.00 6.46
2152 2547 2.164219 TCTTCCGACTTATTTACCGCGT 59.836 45.455 4.92 0.00 0.00 6.01
2153 2548 1.912001 TCCGACTTATTTACCGCGTG 58.088 50.000 4.92 0.00 0.00 5.34
2154 2549 1.202114 TCCGACTTATTTACCGCGTGT 59.798 47.619 4.92 5.32 0.00 4.49
2155 2550 1.585214 CCGACTTATTTACCGCGTGTC 59.415 52.381 4.92 0.00 0.00 3.67
2241 2645 8.869897 TCGTTAGTCATTTATTCAGCACTAAAG 58.130 33.333 0.00 0.00 30.25 1.85
2256 2660 8.023128 TCAGCACTAAAGCAGATGTAATTTTTC 58.977 33.333 0.00 0.00 36.85 2.29
2268 2672 9.916397 CAGATGTAATTTTTCGTGTTAGATACC 57.084 33.333 0.00 0.00 0.00 2.73
2480 2930 7.148086 TGGTACTTTTGGAATATCAGAACATGC 60.148 37.037 0.00 0.00 0.00 4.06
2960 3422 4.154195 ACTGTAACTTCCGATGTTGCATTC 59.846 41.667 15.20 0.00 38.79 2.67
3014 3476 1.398390 GTTCCATGTGTTCAGGATCGC 59.602 52.381 0.00 0.00 0.00 4.58
3119 3581 3.764434 TGTTTCTTTGGGTAAACAGCACA 59.236 39.130 0.00 0.00 39.88 4.57
3217 3697 7.201548 GCTGTTTGTGTTTTTCAATCTCACATT 60.202 33.333 0.00 0.00 38.50 2.71
3220 3700 9.301153 GTTTGTGTTTTTCAATCTCACATTAGT 57.699 29.630 0.00 0.00 38.50 2.24
3275 3916 7.947282 ACTAGAGATGTAAATAACAGGAGAGC 58.053 38.462 0.00 0.00 42.70 4.09
3338 3979 1.805871 GCAGACTGCACTAGCTCATCC 60.806 57.143 22.62 0.00 44.26 3.51
3413 4056 8.068893 TCTGTCTCAAAATGTAAGACGTTTAC 57.931 34.615 11.37 11.37 41.84 2.01
3414 4057 7.924412 TCTGTCTCAAAATGTAAGACGTTTACT 59.076 33.333 16.27 0.00 41.84 2.24
3415 4058 8.068893 TGTCTCAAAATGTAAGACGTTTACTC 57.931 34.615 16.27 0.00 41.84 2.59
3418 4061 7.436080 TCTCAAAATGTAAGACGTTTACTCGTT 59.564 33.333 16.27 9.40 44.21 3.85
3419 4062 7.908230 TCAAAATGTAAGACGTTTACTCGTTT 58.092 30.769 16.27 12.73 44.21 3.60
3420 4063 9.029243 TCAAAATGTAAGACGTTTACTCGTTTA 57.971 29.630 16.27 2.49 44.21 2.01
3432 4075 6.309737 CGTTTACTCGTTTAGCCTACAGAAAT 59.690 38.462 0.00 0.00 0.00 2.17
3639 4612 3.438297 TTAGTGCGATGAAGGAGCTAC 57.562 47.619 0.00 0.00 0.00 3.58
3739 4719 3.740832 CAGACTTGTTCATCTGTTACGCA 59.259 43.478 0.00 0.00 38.03 5.24
3784 4764 4.809070 GCCAAAGCTGACTGGACT 57.191 55.556 12.74 0.00 34.35 3.85
3840 4821 3.368013 CCGCAGTTCAATACCTCACAGTA 60.368 47.826 0.00 0.00 0.00 2.74
3941 4926 8.224389 TGTAGGTATTTCACATTTCCATCATG 57.776 34.615 0.00 0.00 0.00 3.07
4012 5073 9.869757 GATATTGCAACTATTTAAACCTGGTTT 57.130 29.630 26.43 26.43 39.24 3.27
4021 5082 9.457436 ACTATTTAAACCTGGTTTATGTACCTG 57.543 33.333 27.54 17.28 37.74 4.00
4029 5090 3.192466 GGTTTATGTACCTGTAGCACCG 58.808 50.000 0.00 0.00 35.23 4.94
4032 5093 0.454600 ATGTACCTGTAGCACCGTCG 59.545 55.000 0.00 0.00 0.00 5.12
4033 5094 0.890542 TGTACCTGTAGCACCGTCGT 60.891 55.000 0.00 0.00 0.00 4.34
4038 5099 0.039437 CTGTAGCACCGTCGTCAACT 60.039 55.000 0.00 0.00 0.00 3.16
4040 5101 1.608109 TGTAGCACCGTCGTCAACTTA 59.392 47.619 0.00 0.00 0.00 2.24
4041 5102 2.229543 TGTAGCACCGTCGTCAACTTAT 59.770 45.455 0.00 0.00 0.00 1.73
4042 5103 2.450609 AGCACCGTCGTCAACTTATT 57.549 45.000 0.00 0.00 0.00 1.40
4044 5105 3.135994 AGCACCGTCGTCAACTTATTTT 58.864 40.909 0.00 0.00 0.00 1.82
4070 5131 2.126914 TTTTTGCAAATCCACCGTCG 57.873 45.000 13.65 0.00 0.00 5.12
4071 5132 1.309950 TTTTGCAAATCCACCGTCGA 58.690 45.000 13.65 0.00 0.00 4.20
4072 5133 0.589223 TTTGCAAATCCACCGTCGAC 59.411 50.000 8.05 5.18 0.00 4.20
4073 5134 0.533085 TTGCAAATCCACCGTCGACA 60.533 50.000 17.16 0.00 0.00 4.35
4074 5135 0.533085 TGCAAATCCACCGTCGACAA 60.533 50.000 17.16 0.00 0.00 3.18
4075 5136 0.110373 GCAAATCCACCGTCGACAAC 60.110 55.000 17.16 0.00 0.00 3.32
4076 5137 0.515564 CAAATCCACCGTCGACAACC 59.484 55.000 17.16 0.00 0.00 3.77
4077 5138 0.395312 AAATCCACCGTCGACAACCT 59.605 50.000 17.16 0.00 0.00 3.50
4078 5139 0.320421 AATCCACCGTCGACAACCTG 60.320 55.000 17.16 4.21 0.00 4.00
4079 5140 2.167398 ATCCACCGTCGACAACCTGG 62.167 60.000 17.16 13.04 0.00 4.45
4080 5141 2.732016 CACCGTCGACAACCTGGA 59.268 61.111 17.16 0.00 0.00 3.86
4081 5142 1.292223 CACCGTCGACAACCTGGAT 59.708 57.895 17.16 0.00 0.00 3.41
4082 5143 0.320421 CACCGTCGACAACCTGGATT 60.320 55.000 17.16 0.00 0.00 3.01
4083 5144 0.395312 ACCGTCGACAACCTGGATTT 59.605 50.000 17.16 0.00 0.00 2.17
4084 5145 1.076332 CCGTCGACAACCTGGATTTC 58.924 55.000 17.16 0.00 0.00 2.17
4085 5146 1.337823 CCGTCGACAACCTGGATTTCT 60.338 52.381 17.16 0.00 0.00 2.52
4086 5147 2.094390 CCGTCGACAACCTGGATTTCTA 60.094 50.000 17.16 0.00 0.00 2.10
4087 5148 3.581755 CGTCGACAACCTGGATTTCTAA 58.418 45.455 17.16 0.00 0.00 2.10
4088 5149 3.991773 CGTCGACAACCTGGATTTCTAAA 59.008 43.478 17.16 0.00 0.00 1.85
4089 5150 4.449743 CGTCGACAACCTGGATTTCTAAAA 59.550 41.667 17.16 0.00 0.00 1.52
4090 5151 5.121768 CGTCGACAACCTGGATTTCTAAAAT 59.878 40.000 17.16 0.00 0.00 1.82
4091 5152 6.348213 CGTCGACAACCTGGATTTCTAAAATT 60.348 38.462 17.16 0.00 0.00 1.82
4092 5153 7.368059 GTCGACAACCTGGATTTCTAAAATTT 58.632 34.615 11.55 0.00 0.00 1.82
4093 5154 8.508875 GTCGACAACCTGGATTTCTAAAATTTA 58.491 33.333 11.55 0.00 0.00 1.40
4094 5155 9.238368 TCGACAACCTGGATTTCTAAAATTTAT 57.762 29.630 0.00 0.00 0.00 1.40
4095 5156 9.289303 CGACAACCTGGATTTCTAAAATTTATG 57.711 33.333 0.00 0.00 0.00 1.90
4096 5157 9.087424 GACAACCTGGATTTCTAAAATTTATGC 57.913 33.333 0.00 0.00 0.00 3.14
4097 5158 8.592809 ACAACCTGGATTTCTAAAATTTATGCA 58.407 29.630 0.00 0.00 0.00 3.96
4098 5159 8.872845 CAACCTGGATTTCTAAAATTTATGCAC 58.127 33.333 0.00 0.00 0.00 4.57
4099 5160 8.366359 ACCTGGATTTCTAAAATTTATGCACT 57.634 30.769 0.00 0.00 0.00 4.40
4100 5161 8.470002 ACCTGGATTTCTAAAATTTATGCACTC 58.530 33.333 0.00 0.00 0.00 3.51
4101 5162 8.469200 CCTGGATTTCTAAAATTTATGCACTCA 58.531 33.333 0.00 0.00 0.00 3.41
4102 5163 9.512435 CTGGATTTCTAAAATTTATGCACTCAG 57.488 33.333 0.00 0.00 0.00 3.35
4103 5164 9.241919 TGGATTTCTAAAATTTATGCACTCAGA 57.758 29.630 0.00 0.00 0.00 3.27
4115 5176 8.907222 TTTATGCACTCAGAAATATATGAGCA 57.093 30.769 10.78 6.99 46.54 4.26
4116 5177 8.907222 TTATGCACTCAGAAATATATGAGCAA 57.093 30.769 10.78 1.07 46.54 3.91
4117 5178 7.812690 ATGCACTCAGAAATATATGAGCAAA 57.187 32.000 10.78 0.81 46.54 3.68
4118 5179 7.628769 TGCACTCAGAAATATATGAGCAAAA 57.371 32.000 10.78 0.00 46.54 2.44
4119 5180 7.475015 TGCACTCAGAAATATATGAGCAAAAC 58.525 34.615 10.78 1.04 46.54 2.43
4120 5181 6.914757 GCACTCAGAAATATATGAGCAAAACC 59.085 38.462 10.78 0.00 46.54 3.27
4121 5182 7.201767 GCACTCAGAAATATATGAGCAAAACCT 60.202 37.037 10.78 0.00 46.54 3.50
4122 5183 8.127327 CACTCAGAAATATATGAGCAAAACCTG 58.873 37.037 10.78 0.00 46.54 4.00
4123 5184 8.049117 ACTCAGAAATATATGAGCAAAACCTGA 58.951 33.333 10.78 0.00 46.54 3.86
4124 5185 8.806429 TCAGAAATATATGAGCAAAACCTGAA 57.194 30.769 0.00 0.00 0.00 3.02
4125 5186 9.241919 TCAGAAATATATGAGCAAAACCTGAAA 57.758 29.630 0.00 0.00 0.00 2.69
4131 5192 9.976511 ATATATGAGCAAAACCTGAAATTGATG 57.023 29.630 0.00 0.00 0.00 3.07
4132 5193 5.534207 TGAGCAAAACCTGAAATTGATGT 57.466 34.783 0.00 0.00 0.00 3.06
4133 5194 5.916318 TGAGCAAAACCTGAAATTGATGTT 58.084 33.333 0.00 0.00 0.00 2.71
4134 5195 5.984926 TGAGCAAAACCTGAAATTGATGTTC 59.015 36.000 0.00 0.00 0.00 3.18
4135 5196 6.165700 AGCAAAACCTGAAATTGATGTTCT 57.834 33.333 0.00 0.00 0.00 3.01
4136 5197 5.987347 AGCAAAACCTGAAATTGATGTTCTG 59.013 36.000 0.00 0.00 0.00 3.02
4137 5198 5.333568 GCAAAACCTGAAATTGATGTTCTGC 60.334 40.000 0.00 0.00 0.00 4.26
4138 5199 5.796424 AAACCTGAAATTGATGTTCTGCT 57.204 34.783 0.00 0.00 0.00 4.24
4139 5200 4.778534 ACCTGAAATTGATGTTCTGCTG 57.221 40.909 0.00 0.00 0.00 4.41
4140 5201 4.401022 ACCTGAAATTGATGTTCTGCTGA 58.599 39.130 0.00 0.00 0.00 4.26
4141 5202 5.014858 ACCTGAAATTGATGTTCTGCTGAT 58.985 37.500 0.00 0.00 0.00 2.90
4142 5203 5.479375 ACCTGAAATTGATGTTCTGCTGATT 59.521 36.000 0.00 0.00 0.00 2.57
4143 5204 6.014840 ACCTGAAATTGATGTTCTGCTGATTT 60.015 34.615 0.00 0.00 0.00 2.17
4144 5205 6.310467 CCTGAAATTGATGTTCTGCTGATTTG 59.690 38.462 0.00 0.00 0.00 2.32
4145 5206 6.983984 TGAAATTGATGTTCTGCTGATTTGA 58.016 32.000 0.00 0.00 0.00 2.69
4146 5207 7.608153 TGAAATTGATGTTCTGCTGATTTGAT 58.392 30.769 0.00 0.00 0.00 2.57
4147 5208 7.758076 TGAAATTGATGTTCTGCTGATTTGATC 59.242 33.333 0.00 0.00 0.00 2.92
4148 5209 7.406031 AATTGATGTTCTGCTGATTTGATCT 57.594 32.000 0.00 0.00 0.00 2.75
4149 5210 5.813080 TGATGTTCTGCTGATTTGATCTG 57.187 39.130 0.00 0.00 0.00 2.90
4150 5211 5.493809 TGATGTTCTGCTGATTTGATCTGA 58.506 37.500 0.00 0.00 0.00 3.27
4151 5212 5.941647 TGATGTTCTGCTGATTTGATCTGAA 59.058 36.000 0.00 0.00 0.00 3.02
4152 5213 6.431852 TGATGTTCTGCTGATTTGATCTGAAA 59.568 34.615 0.00 0.00 0.00 2.69
4153 5214 6.005583 TGTTCTGCTGATTTGATCTGAAAC 57.994 37.500 0.00 0.00 0.00 2.78
4154 5215 5.766670 TGTTCTGCTGATTTGATCTGAAACT 59.233 36.000 0.00 0.00 0.00 2.66
4155 5216 6.263842 TGTTCTGCTGATTTGATCTGAAACTT 59.736 34.615 0.00 0.00 0.00 2.66
4156 5217 6.889301 TCTGCTGATTTGATCTGAAACTTT 57.111 33.333 0.00 0.00 0.00 2.66
4157 5218 7.281040 TCTGCTGATTTGATCTGAAACTTTT 57.719 32.000 0.00 0.00 0.00 2.27
4158 5219 7.365741 TCTGCTGATTTGATCTGAAACTTTTC 58.634 34.615 0.00 0.00 37.69 2.29
4159 5220 7.230108 TCTGCTGATTTGATCTGAAACTTTTCT 59.770 33.333 3.48 0.00 38.02 2.52
4160 5221 7.365741 TGCTGATTTGATCTGAAACTTTTCTC 58.634 34.615 3.48 0.00 38.02 2.87
4161 5222 7.013559 TGCTGATTTGATCTGAAACTTTTCTCA 59.986 33.333 3.48 0.00 38.02 3.27
4162 5223 7.864379 GCTGATTTGATCTGAAACTTTTCTCAA 59.136 33.333 3.48 2.87 38.02 3.02
4163 5224 9.740239 CTGATTTGATCTGAAACTTTTCTCAAA 57.260 29.630 14.81 14.81 40.21 2.69
4164 5225 9.520204 TGATTTGATCTGAAACTTTTCTCAAAC 57.480 29.630 14.78 11.27 39.48 2.93
4165 5226 9.520204 GATTTGATCTGAAACTTTTCTCAAACA 57.480 29.630 14.78 1.84 39.48 2.83
4167 5228 9.874205 TTTGATCTGAAACTTTTCTCAAACATT 57.126 25.926 10.98 0.00 35.64 2.71
4169 5230 9.950680 TGATCTGAAACTTTTCTCAAACATTAC 57.049 29.630 3.48 0.00 38.02 1.89
4181 5242 9.729023 TTTCTCAAACATTACTTATTGTGTGTG 57.271 29.630 0.00 0.00 33.61 3.82
4182 5243 7.870826 TCTCAAACATTACTTATTGTGTGTGG 58.129 34.615 0.00 0.00 33.61 4.17
4183 5244 7.717436 TCTCAAACATTACTTATTGTGTGTGGA 59.283 33.333 0.00 0.00 33.61 4.02
4184 5245 8.226819 TCAAACATTACTTATTGTGTGTGGAA 57.773 30.769 0.00 0.00 33.61 3.53
4185 5246 8.132362 TCAAACATTACTTATTGTGTGTGGAAC 58.868 33.333 0.00 0.00 33.61 3.62
4186 5247 7.817418 AACATTACTTATTGTGTGTGGAACT 57.183 32.000 0.00 0.00 38.04 3.01
4187 5248 7.435068 ACATTACTTATTGTGTGTGGAACTC 57.565 36.000 0.00 0.00 38.04 3.01
4188 5249 7.224297 ACATTACTTATTGTGTGTGGAACTCT 58.776 34.615 0.00 0.00 38.04 3.24
4189 5250 8.372459 ACATTACTTATTGTGTGTGGAACTCTA 58.628 33.333 0.00 0.00 38.04 2.43
4190 5251 9.383519 CATTACTTATTGTGTGTGGAACTCTAT 57.616 33.333 0.00 0.00 38.04 1.98
4191 5252 8.771920 TTACTTATTGTGTGTGGAACTCTATG 57.228 34.615 0.00 0.00 38.04 2.23
4192 5253 6.769512 ACTTATTGTGTGTGGAACTCTATGT 58.230 36.000 0.00 0.00 38.04 2.29
4193 5254 7.224297 ACTTATTGTGTGTGGAACTCTATGTT 58.776 34.615 0.00 0.00 42.38 2.71
4194 5255 5.947228 ATTGTGTGTGGAACTCTATGTTG 57.053 39.130 0.00 0.00 39.30 3.33
4195 5256 4.415881 TGTGTGTGGAACTCTATGTTGT 57.584 40.909 0.00 0.00 39.30 3.32
4196 5257 4.126437 TGTGTGTGGAACTCTATGTTGTG 58.874 43.478 0.00 0.00 39.30 3.33
4197 5258 3.058914 GTGTGTGGAACTCTATGTTGTGC 60.059 47.826 0.00 0.00 39.30 4.57
4198 5259 2.484264 GTGTGGAACTCTATGTTGTGCC 59.516 50.000 0.00 0.00 39.30 5.01
4199 5260 2.371841 TGTGGAACTCTATGTTGTGCCT 59.628 45.455 0.00 0.00 39.30 4.75
4200 5261 2.744202 GTGGAACTCTATGTTGTGCCTG 59.256 50.000 0.00 0.00 39.30 4.85
4201 5262 2.637382 TGGAACTCTATGTTGTGCCTGA 59.363 45.455 0.00 0.00 39.30 3.86
4202 5263 3.264193 TGGAACTCTATGTTGTGCCTGAT 59.736 43.478 0.00 0.00 39.30 2.90
4203 5264 4.469586 TGGAACTCTATGTTGTGCCTGATA 59.530 41.667 0.00 0.00 39.30 2.15
4204 5265 5.053145 GGAACTCTATGTTGTGCCTGATAG 58.947 45.833 0.00 0.00 39.30 2.08
4205 5266 5.395768 GGAACTCTATGTTGTGCCTGATAGT 60.396 44.000 0.00 0.00 39.30 2.12
4206 5267 5.683876 ACTCTATGTTGTGCCTGATAGTT 57.316 39.130 0.00 0.00 0.00 2.24
4207 5268 6.791867 ACTCTATGTTGTGCCTGATAGTTA 57.208 37.500 0.00 0.00 0.00 2.24
4208 5269 7.366847 ACTCTATGTTGTGCCTGATAGTTAT 57.633 36.000 0.00 0.00 0.00 1.89
4209 5270 7.796054 ACTCTATGTTGTGCCTGATAGTTATT 58.204 34.615 0.00 0.00 0.00 1.40
4210 5271 8.267894 ACTCTATGTTGTGCCTGATAGTTATTT 58.732 33.333 0.00 0.00 0.00 1.40
4211 5272 8.662781 TCTATGTTGTGCCTGATAGTTATTTC 57.337 34.615 0.00 0.00 0.00 2.17
4212 5273 8.486210 TCTATGTTGTGCCTGATAGTTATTTCT 58.514 33.333 0.00 0.00 0.00 2.52
4213 5274 9.764363 CTATGTTGTGCCTGATAGTTATTTCTA 57.236 33.333 0.00 0.00 0.00 2.10
4215 5276 8.856153 TGTTGTGCCTGATAGTTATTTCTAAA 57.144 30.769 0.00 0.00 0.00 1.85
4216 5277 9.290988 TGTTGTGCCTGATAGTTATTTCTAAAA 57.709 29.630 0.00 0.00 0.00 1.52
4217 5278 9.774742 GTTGTGCCTGATAGTTATTTCTAAAAG 57.225 33.333 0.00 0.00 0.00 2.27
4218 5279 9.515226 TTGTGCCTGATAGTTATTTCTAAAAGT 57.485 29.630 0.00 0.00 0.00 2.66
4219 5280 8.946085 TGTGCCTGATAGTTATTTCTAAAAGTG 58.054 33.333 0.00 0.00 0.00 3.16
4220 5281 8.398665 GTGCCTGATAGTTATTTCTAAAAGTGG 58.601 37.037 0.00 0.00 0.00 4.00
4221 5282 8.107095 TGCCTGATAGTTATTTCTAAAAGTGGT 58.893 33.333 0.00 0.00 0.00 4.16
4222 5283 8.613482 GCCTGATAGTTATTTCTAAAAGTGGTC 58.387 37.037 0.00 0.00 0.00 4.02
4223 5284 9.892130 CCTGATAGTTATTTCTAAAAGTGGTCT 57.108 33.333 0.00 0.00 0.00 3.85
4234 5295 9.774413 TTTCTAAAAGTGGTCTCTAAAGTTAGG 57.226 33.333 0.00 0.00 0.00 2.69
4235 5296 7.384477 TCTAAAAGTGGTCTCTAAAGTTAGGC 58.616 38.462 0.00 0.00 0.00 3.93
4236 5297 5.827326 AAAGTGGTCTCTAAAGTTAGGCT 57.173 39.130 0.00 0.00 0.00 4.58
4237 5298 5.408880 AAGTGGTCTCTAAAGTTAGGCTC 57.591 43.478 0.00 0.00 0.00 4.70
4238 5299 4.417437 AGTGGTCTCTAAAGTTAGGCTCA 58.583 43.478 0.00 0.00 0.00 4.26
4239 5300 4.838986 AGTGGTCTCTAAAGTTAGGCTCAA 59.161 41.667 0.00 0.00 0.00 3.02
4240 5301 5.307196 AGTGGTCTCTAAAGTTAGGCTCAAA 59.693 40.000 0.00 0.00 0.00 2.69
4241 5302 6.013293 AGTGGTCTCTAAAGTTAGGCTCAAAT 60.013 38.462 0.00 0.00 0.00 2.32
4242 5303 6.314152 GTGGTCTCTAAAGTTAGGCTCAAATC 59.686 42.308 0.00 0.00 0.00 2.17
4243 5304 6.213600 TGGTCTCTAAAGTTAGGCTCAAATCT 59.786 38.462 0.00 0.00 0.00 2.40
4244 5305 7.106890 GGTCTCTAAAGTTAGGCTCAAATCTT 58.893 38.462 0.00 0.00 0.00 2.40
4245 5306 7.608376 GGTCTCTAAAGTTAGGCTCAAATCTTT 59.392 37.037 0.00 0.00 0.00 2.52
4246 5307 9.654663 GTCTCTAAAGTTAGGCTCAAATCTTTA 57.345 33.333 0.00 0.37 0.00 1.85
4253 5314 9.920946 AAGTTAGGCTCAAATCTTTAATATGGA 57.079 29.630 0.00 0.00 0.00 3.41
4254 5315 9.566432 AGTTAGGCTCAAATCTTTAATATGGAG 57.434 33.333 0.00 0.00 0.00 3.86
4255 5316 9.561069 GTTAGGCTCAAATCTTTAATATGGAGA 57.439 33.333 0.00 0.00 0.00 3.71
4257 5318 8.632906 AGGCTCAAATCTTTAATATGGAGATG 57.367 34.615 0.00 0.00 30.91 2.90
4258 5319 8.223330 AGGCTCAAATCTTTAATATGGAGATGT 58.777 33.333 0.00 0.00 30.91 3.06
4259 5320 8.295288 GGCTCAAATCTTTAATATGGAGATGTG 58.705 37.037 0.00 6.91 36.77 3.21
4260 5321 8.844244 GCTCAAATCTTTAATATGGAGATGTGT 58.156 33.333 10.73 0.00 36.78 3.72
4272 5333 8.954950 ATATGGAGATGTGTTAAAGAACTCAG 57.045 34.615 0.00 0.00 41.12 3.35
4273 5334 6.174720 TGGAGATGTGTTAAAGAACTCAGT 57.825 37.500 0.00 0.00 41.12 3.41
4274 5335 5.991606 TGGAGATGTGTTAAAGAACTCAGTG 59.008 40.000 0.00 0.00 41.12 3.66
4275 5336 5.992217 GGAGATGTGTTAAAGAACTCAGTGT 59.008 40.000 0.00 0.00 41.12 3.55
4276 5337 6.146347 GGAGATGTGTTAAAGAACTCAGTGTC 59.854 42.308 0.00 0.00 41.12 3.67
4277 5338 5.692204 AGATGTGTTAAAGAACTCAGTGTCG 59.308 40.000 0.00 0.00 41.12 4.35
4278 5339 4.116961 TGTGTTAAAGAACTCAGTGTCGG 58.883 43.478 0.00 0.00 34.86 4.79
4279 5340 4.142116 TGTGTTAAAGAACTCAGTGTCGGA 60.142 41.667 0.00 0.00 34.86 4.55
4280 5341 4.989168 GTGTTAAAGAACTCAGTGTCGGAT 59.011 41.667 0.00 0.00 36.45 4.18
4281 5342 4.988540 TGTTAAAGAACTCAGTGTCGGATG 59.011 41.667 0.00 0.00 36.45 3.51
4282 5343 2.751166 AAGAACTCAGTGTCGGATGG 57.249 50.000 0.00 0.00 0.00 3.51
4283 5344 1.924731 AGAACTCAGTGTCGGATGGA 58.075 50.000 0.00 0.00 0.00 3.41
4284 5345 1.546476 AGAACTCAGTGTCGGATGGAC 59.454 52.381 0.00 0.00 46.27 4.02
4285 5346 1.546476 GAACTCAGTGTCGGATGGACT 59.454 52.381 0.00 0.00 46.24 3.85
4286 5347 1.178276 ACTCAGTGTCGGATGGACTC 58.822 55.000 0.00 0.00 46.24 3.36
4287 5348 1.177401 CTCAGTGTCGGATGGACTCA 58.823 55.000 0.00 0.00 46.24 3.41
4288 5349 1.753649 CTCAGTGTCGGATGGACTCAT 59.246 52.381 0.00 0.00 46.24 2.90
4289 5350 2.167281 CTCAGTGTCGGATGGACTCATT 59.833 50.000 0.00 0.00 46.24 2.57
4290 5351 2.567169 TCAGTGTCGGATGGACTCATTT 59.433 45.455 0.00 0.00 46.24 2.32
4291 5352 3.007940 TCAGTGTCGGATGGACTCATTTT 59.992 43.478 0.00 0.00 46.24 1.82
4292 5353 3.125829 CAGTGTCGGATGGACTCATTTTG 59.874 47.826 0.00 0.00 46.24 2.44
4293 5354 3.007940 AGTGTCGGATGGACTCATTTTGA 59.992 43.478 0.00 0.00 46.24 2.69
4308 5369 4.453478 TCATTTTGAGACACTGAGATGTGC 59.547 41.667 0.00 0.00 41.30 4.57
4309 5370 2.462456 TTGAGACACTGAGATGTGCC 57.538 50.000 0.00 0.00 41.30 5.01
4310 5371 1.341080 TGAGACACTGAGATGTGCCA 58.659 50.000 0.00 0.00 41.30 4.92
4311 5372 1.904537 TGAGACACTGAGATGTGCCAT 59.095 47.619 0.00 0.00 41.30 4.40
4312 5373 2.093816 TGAGACACTGAGATGTGCCATC 60.094 50.000 6.98 6.98 41.30 3.51
4313 5374 2.168106 GAGACACTGAGATGTGCCATCT 59.832 50.000 15.06 15.06 41.30 2.90
4314 5375 3.369175 AGACACTGAGATGTGCCATCTA 58.631 45.455 15.11 6.15 41.30 1.98
4315 5376 3.966006 AGACACTGAGATGTGCCATCTAT 59.034 43.478 15.11 4.69 41.30 1.98
4316 5377 4.408270 AGACACTGAGATGTGCCATCTATT 59.592 41.667 15.11 3.44 41.30 1.73
4317 5378 5.104610 AGACACTGAGATGTGCCATCTATTT 60.105 40.000 15.11 3.16 41.30 1.40
4318 5379 4.880120 ACACTGAGATGTGCCATCTATTTG 59.120 41.667 15.11 13.70 41.30 2.32
4319 5380 4.880120 CACTGAGATGTGCCATCTATTTGT 59.120 41.667 15.11 10.01 0.00 2.83
4320 5381 5.007430 CACTGAGATGTGCCATCTATTTGTC 59.993 44.000 15.11 5.66 0.00 3.18
4321 5382 5.104610 ACTGAGATGTGCCATCTATTTGTCT 60.105 40.000 15.11 0.00 0.00 3.41
4322 5383 5.363101 TGAGATGTGCCATCTATTTGTCTC 58.637 41.667 15.11 5.04 0.00 3.36
4323 5384 5.129980 TGAGATGTGCCATCTATTTGTCTCT 59.870 40.000 15.11 0.00 32.82 3.10
4324 5385 5.366460 AGATGTGCCATCTATTTGTCTCTG 58.634 41.667 13.93 0.00 0.00 3.35
4396 5457 3.254166 ACTTACACGAACTGGACATACGT 59.746 43.478 0.00 0.00 37.68 3.57
4406 5467 3.002791 CTGGACATACGTCAGCAACAAT 58.997 45.455 0.00 0.00 44.54 2.71
4407 5468 3.407698 TGGACATACGTCAGCAACAATT 58.592 40.909 0.00 0.00 44.54 2.32
4461 5599 7.582352 GGACAAACCTCTATTTTACAACACTC 58.418 38.462 0.00 0.00 35.41 3.51
4488 5626 6.570692 ACGAGTACCGAATAACAGATTTCAT 58.429 36.000 10.17 0.00 41.76 2.57
4510 5648 7.792032 TCATGTCCTTAAATAAGACACCTAGG 58.208 38.462 7.41 7.41 35.33 3.02
4519 5657 9.537852 TTAAATAAGACACCTAGGACTGAGTTA 57.462 33.333 17.98 11.20 0.00 2.24
4558 5696 4.214119 GTCATTGCTTGCTTCAGAACAGTA 59.786 41.667 0.00 0.00 0.00 2.74
4560 5698 2.771089 TGCTTGCTTCAGAACAGTAGG 58.229 47.619 0.00 0.00 0.00 3.18
4588 5726 6.875726 CAGTCTCCAGTATGATCTTTTGACAA 59.124 38.462 0.00 0.00 39.69 3.18
4602 5740 2.655090 TGACAACCCATTCTTGCTGA 57.345 45.000 0.00 0.00 0.00 4.26
4606 5744 3.499338 ACAACCCATTCTTGCTGATTCA 58.501 40.909 0.00 0.00 0.00 2.57
4609 5747 3.972133 ACCCATTCTTGCTGATTCATGA 58.028 40.909 0.00 0.00 0.00 3.07
4615 5753 4.023739 TCTTGCTGATTCATGAATTGCG 57.976 40.909 27.04 19.55 35.14 4.85
4626 5764 3.434984 TCATGAATTGCGTGAAACATCGA 59.565 39.130 0.00 0.00 39.51 3.59
4628 5766 4.418013 TGAATTGCGTGAAACATCGATT 57.582 36.364 0.00 0.00 35.74 3.34
4651 5789 2.046023 TCTGCATGCAAGGGGTCG 60.046 61.111 22.88 8.21 0.00 4.79
4652 5790 3.136123 CTGCATGCAAGGGGTCGG 61.136 66.667 22.88 3.14 0.00 4.79
4687 5825 3.324930 CCTGCTCCTGCCACCAGA 61.325 66.667 0.00 0.00 41.77 3.86
4708 5846 7.099120 CCAGAGTTTCCCCTAATTCATTTTTG 58.901 38.462 0.00 0.00 0.00 2.44
4729 5867 1.000646 GGTAAAACCCCATCCGCCA 60.001 57.895 0.00 0.00 30.04 5.69
4765 5903 3.114606 TCTGAATGCCCCATCTGAGTTA 58.885 45.455 0.00 0.00 0.00 2.24
4788 5926 4.740154 TTTTCAGGAAATCCTTGGGAGA 57.260 40.909 0.00 0.00 46.09 3.71
4828 5966 8.730680 TGTATGTTATTTTGCCTCTTCTCTTTC 58.269 33.333 0.00 0.00 0.00 2.62
4837 5975 4.006989 GCCTCTTCTCTTTCCTCCTTTTC 58.993 47.826 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 8.998377 CCTGATAAAAATGTTTCCGGAATTTTT 58.002 29.630 28.95 28.95 42.83 1.94
19 20 8.154203 ACCTGATAAAAATGTTTCCGGAATTTT 58.846 29.630 22.91 22.91 35.55 1.82
20 21 7.676004 ACCTGATAAAAATGTTTCCGGAATTT 58.324 30.769 19.62 16.87 0.00 1.82
21 22 7.239763 ACCTGATAAAAATGTTTCCGGAATT 57.760 32.000 19.62 10.71 0.00 2.17
22 23 6.850752 ACCTGATAAAAATGTTTCCGGAAT 57.149 33.333 19.62 3.27 0.00 3.01
23 24 6.265649 TGAACCTGATAAAAATGTTTCCGGAA 59.734 34.615 14.35 14.35 0.00 4.30
24 25 5.770663 TGAACCTGATAAAAATGTTTCCGGA 59.229 36.000 0.00 0.00 0.00 5.14
25 26 6.019779 TGAACCTGATAAAAATGTTTCCGG 57.980 37.500 0.00 0.00 0.00 5.14
26 27 7.538575 AGATGAACCTGATAAAAATGTTTCCG 58.461 34.615 0.00 0.00 0.00 4.30
27 28 7.976175 GGAGATGAACCTGATAAAAATGTTTCC 59.024 37.037 0.00 0.00 0.00 3.13
28 29 8.522830 TGGAGATGAACCTGATAAAAATGTTTC 58.477 33.333 0.00 0.00 0.00 2.78
29 30 8.421249 TGGAGATGAACCTGATAAAAATGTTT 57.579 30.769 0.00 0.00 0.00 2.83
30 31 8.306761 GTTGGAGATGAACCTGATAAAAATGTT 58.693 33.333 0.00 0.00 0.00 2.71
31 32 7.093771 GGTTGGAGATGAACCTGATAAAAATGT 60.094 37.037 0.00 0.00 39.94 2.71
32 33 7.093814 TGGTTGGAGATGAACCTGATAAAAATG 60.094 37.037 0.00 0.00 43.00 2.32
33 34 6.953520 TGGTTGGAGATGAACCTGATAAAAAT 59.046 34.615 0.00 0.00 43.00 1.82
34 35 6.310941 TGGTTGGAGATGAACCTGATAAAAA 58.689 36.000 0.00 0.00 43.00 1.94
35 36 5.886609 TGGTTGGAGATGAACCTGATAAAA 58.113 37.500 0.00 0.00 43.00 1.52
36 37 5.500234 CTGGTTGGAGATGAACCTGATAAA 58.500 41.667 0.00 0.00 43.00 1.40
37 38 4.080356 CCTGGTTGGAGATGAACCTGATAA 60.080 45.833 0.00 0.00 43.00 1.75
38 39 3.455910 CCTGGTTGGAGATGAACCTGATA 59.544 47.826 0.00 0.00 43.00 2.15
39 40 2.240667 CCTGGTTGGAGATGAACCTGAT 59.759 50.000 0.00 0.00 43.00 2.90
40 41 1.630369 CCTGGTTGGAGATGAACCTGA 59.370 52.381 0.00 0.00 43.00 3.86
41 42 1.352352 ACCTGGTTGGAGATGAACCTG 59.648 52.381 0.00 0.00 43.00 4.00
42 43 1.352352 CACCTGGTTGGAGATGAACCT 59.648 52.381 0.00 0.00 43.00 3.50
43 44 1.073923 ACACCTGGTTGGAGATGAACC 59.926 52.381 0.00 0.00 42.90 3.62
44 45 2.568623 ACACCTGGTTGGAGATGAAC 57.431 50.000 0.00 0.00 39.71 3.18
45 46 3.843619 TGATACACCTGGTTGGAGATGAA 59.156 43.478 0.00 0.00 39.71 2.57
46 47 3.449918 TGATACACCTGGTTGGAGATGA 58.550 45.455 0.00 0.00 39.71 2.92
47 48 3.432749 CCTGATACACCTGGTTGGAGATG 60.433 52.174 0.00 0.00 39.71 2.90
48 49 2.774234 CCTGATACACCTGGTTGGAGAT 59.226 50.000 0.00 0.00 39.71 2.75
49 50 2.187958 CCTGATACACCTGGTTGGAGA 58.812 52.381 0.00 0.00 39.71 3.71
50 51 1.210478 CCCTGATACACCTGGTTGGAG 59.790 57.143 0.00 0.00 39.71 3.86
51 52 1.285280 CCCTGATACACCTGGTTGGA 58.715 55.000 0.00 0.00 39.71 3.53
52 53 0.255890 CCCCTGATACACCTGGTTGG 59.744 60.000 0.00 0.00 42.93 3.77
53 54 0.991920 ACCCCTGATACACCTGGTTG 59.008 55.000 0.00 0.00 0.00 3.77
54 55 2.653543 TACCCCTGATACACCTGGTT 57.346 50.000 0.00 0.00 0.00 3.67
55 56 2.889522 ATACCCCTGATACACCTGGT 57.110 50.000 0.00 0.00 0.00 4.00
56 57 4.461198 GAAAATACCCCTGATACACCTGG 58.539 47.826 0.00 0.00 0.00 4.45
57 58 4.461198 GGAAAATACCCCTGATACACCTG 58.539 47.826 0.00 0.00 0.00 4.00
58 59 3.135895 CGGAAAATACCCCTGATACACCT 59.864 47.826 0.00 0.00 0.00 4.00
59 60 3.135167 TCGGAAAATACCCCTGATACACC 59.865 47.826 0.00 0.00 0.00 4.16
60 61 4.411256 TCGGAAAATACCCCTGATACAC 57.589 45.455 0.00 0.00 0.00 2.90
61 62 6.945636 ATATCGGAAAATACCCCTGATACA 57.054 37.500 0.00 0.00 0.00 2.29
62 63 6.598064 CCAATATCGGAAAATACCCCTGATAC 59.402 42.308 0.00 0.00 0.00 2.24
63 64 6.502510 TCCAATATCGGAAAATACCCCTGATA 59.497 38.462 0.00 0.00 29.93 2.15
64 65 5.312178 TCCAATATCGGAAAATACCCCTGAT 59.688 40.000 0.00 0.00 29.93 2.90
65 66 4.661240 TCCAATATCGGAAAATACCCCTGA 59.339 41.667 0.00 0.00 29.93 3.86
66 67 4.760204 GTCCAATATCGGAAAATACCCCTG 59.240 45.833 0.00 0.00 36.62 4.45
67 68 4.504340 CGTCCAATATCGGAAAATACCCCT 60.504 45.833 0.00 0.00 36.62 4.79
68 69 3.749609 CGTCCAATATCGGAAAATACCCC 59.250 47.826 0.00 0.00 36.62 4.95
111 112 3.006940 TCTTGTTACCATCCACGAATGC 58.993 45.455 0.00 0.00 0.00 3.56
161 162 2.308570 ACCTGAACTATGTTGCCATCCA 59.691 45.455 0.00 0.00 32.29 3.41
197 243 4.373116 GCGGAGTGGCGTTCCTCA 62.373 66.667 5.68 0.00 32.34 3.86
207 253 4.742201 CACGTGAGGGGCGGAGTG 62.742 72.222 10.90 0.00 0.00 3.51
208 254 4.988716 TCACGTGAGGGGCGGAGT 62.989 66.667 15.76 0.00 33.12 3.85
209 255 4.135153 CTCACGTGAGGGGCGGAG 62.135 72.222 33.36 10.06 38.48 4.63
222 268 2.432628 CGGAGTGGCGTTCCTCAC 60.433 66.667 5.68 0.00 32.34 3.51
223 269 4.373116 GCGGAGTGGCGTTCCTCA 62.373 66.667 5.68 0.00 32.34 3.86
243 289 2.143925 GAACGAAGGAAGGTTGGTGAG 58.856 52.381 0.00 0.00 0.00 3.51
257 303 5.006649 CGATATCAAGGATTTGCAGAACGAA 59.993 40.000 3.12 0.00 34.21 3.85
258 304 4.507756 CGATATCAAGGATTTGCAGAACGA 59.492 41.667 3.12 0.00 34.21 3.85
275 321 1.443872 CGCGCCCAGGTACGATATC 60.444 63.158 0.00 0.00 0.00 1.63
333 405 1.079127 ATCCGGGAACTCACGCTTG 60.079 57.895 0.00 0.00 42.34 4.01
334 406 1.218316 GATCCGGGAACTCACGCTT 59.782 57.895 0.00 0.00 42.34 4.68
335 407 1.982395 TGATCCGGGAACTCACGCT 60.982 57.895 0.00 0.00 42.34 5.07
336 408 1.810030 GTGATCCGGGAACTCACGC 60.810 63.158 13.43 1.93 42.34 5.34
402 488 4.488911 ATCTGGGAGAGGGCGGCT 62.489 66.667 9.56 0.00 0.00 5.52
438 524 3.490759 CGCGTGCCACTAGCCAAG 61.491 66.667 0.00 0.00 42.71 3.61
487 578 3.322466 AGAGCAGGGGTTCCACGG 61.322 66.667 0.00 0.00 34.83 4.94
489 580 2.352805 CCAGAGCAGGGGTTCCAC 59.647 66.667 0.00 0.00 34.83 4.02
490 581 3.650950 GCCAGAGCAGGGGTTCCA 61.651 66.667 0.00 0.00 39.53 3.53
491 582 4.432741 GGCCAGAGCAGGGGTTCC 62.433 72.222 0.00 0.00 42.56 3.62
493 584 3.655211 CAGGCCAGAGCAGGGGTT 61.655 66.667 5.01 0.00 42.56 4.11
601 744 4.504916 CCTCCTCACGCTGAGCCG 62.505 72.222 0.00 0.00 42.98 5.52
602 745 4.154347 CCCTCCTCACGCTGAGCC 62.154 72.222 0.00 0.00 42.98 4.70
603 746 4.828925 GCCCTCCTCACGCTGAGC 62.829 72.222 0.00 0.00 42.98 4.26
644 790 3.426568 GACCGGCTTGCTGAGTGC 61.427 66.667 0.00 0.00 43.25 4.40
647 793 2.507992 CGAGACCGGCTTGCTGAG 60.508 66.667 0.00 0.00 0.00 3.35
683 833 0.960364 CAACAGCATTACGGCCTGGT 60.960 55.000 0.00 0.00 0.00 4.00
687 837 2.046285 AGGCAACAGCATTACGGCC 61.046 57.895 0.00 0.00 41.65 6.13
709 859 2.287915 GCACGGAGAAATTCGTATGCAT 59.712 45.455 3.79 3.79 37.88 3.96
725 875 1.377725 AAATGGAGGCAGAGCACGG 60.378 57.895 0.00 0.00 0.00 4.94
741 894 7.096551 GGGACTAAAATTAAGCTTCATGCAAA 58.903 34.615 0.00 0.00 45.94 3.68
746 899 4.035208 CGCGGGACTAAAATTAAGCTTCAT 59.965 41.667 0.00 0.00 0.00 2.57
778 931 2.972505 ACGGTGCAAGAAGTGGCG 60.973 61.111 0.00 0.00 0.00 5.69
785 938 4.947147 GTGCCCCACGGTGCAAGA 62.947 66.667 1.68 0.00 39.57 3.02
801 958 1.228245 AAACAGCTCGTGGGCATGT 60.228 52.632 0.00 0.00 34.17 3.21
849 1006 3.302685 AAAAGCCCCAGCCCCTAGC 62.303 63.158 0.00 0.00 41.25 3.42
959 1131 4.067192 GCCTGCAAATCAAAAGGAAACAT 58.933 39.130 0.00 0.00 30.92 2.71
985 1157 1.308998 GCCATACCATACACACCTGC 58.691 55.000 0.00 0.00 0.00 4.85
986 1158 1.211703 TGGCCATACCATACACACCTG 59.788 52.381 0.00 0.00 46.36 4.00
987 1159 1.590591 TGGCCATACCATACACACCT 58.409 50.000 0.00 0.00 46.36 4.00
1155 1327 1.174712 AAACGTCCATTGCTGCTGCT 61.175 50.000 17.00 0.00 40.48 4.24
1170 1342 1.740025 GAGGAAGGATGCTTGGAAACG 59.260 52.381 3.35 0.00 0.00 3.60
1173 1345 2.915604 AGAAGAGGAAGGATGCTTGGAA 59.084 45.455 3.35 0.00 0.00 3.53
1182 1354 3.650942 TGGCTAAACAAGAAGAGGAAGGA 59.349 43.478 0.00 0.00 0.00 3.36
1310 1487 4.041567 TGAGAACCTCTGGACATAAGCAAA 59.958 41.667 0.00 0.00 0.00 3.68
1311 1488 3.582647 TGAGAACCTCTGGACATAAGCAA 59.417 43.478 0.00 0.00 0.00 3.91
1332 1509 4.082192 GCATTGCGCCATGTCTTG 57.918 55.556 21.13 0.00 32.94 3.02
1359 1536 1.863454 GTGCTATCCACATCGAAGCAG 59.137 52.381 5.97 0.00 43.35 4.24
1401 1578 3.690139 CACAGAAATCAGCAAGCTCATCT 59.310 43.478 0.00 0.00 0.00 2.90
1509 1686 6.238103 CGGAAACTGCGACACTTATTATGATT 60.238 38.462 0.00 0.00 30.86 2.57
1520 1697 1.359848 ATGATCGGAAACTGCGACAC 58.640 50.000 0.00 0.00 44.37 3.67
1658 1839 2.769652 AAATCCGGGCAGCAAGAGCA 62.770 55.000 0.00 0.00 45.49 4.26
1912 2100 2.447244 AACAGAGAAGCCGAGTGAAG 57.553 50.000 0.00 0.00 0.00 3.02
2130 2525 3.181397 CGCGGTAAATAAGTCGGAAGAA 58.819 45.455 0.00 0.00 45.01 2.52
2131 2526 2.164219 ACGCGGTAAATAAGTCGGAAGA 59.836 45.455 12.47 0.00 38.16 2.87
2150 2545 4.978186 TCTCTTATTAAGACACGGACACG 58.022 43.478 1.90 0.00 38.61 4.49
2151 2546 7.010275 GGAAATCTCTTATTAAGACACGGACAC 59.990 40.741 1.90 0.00 33.12 3.67
2152 2547 7.039882 GGAAATCTCTTATTAAGACACGGACA 58.960 38.462 1.90 0.00 33.12 4.02
2153 2548 7.266400 AGGAAATCTCTTATTAAGACACGGAC 58.734 38.462 1.90 0.00 33.12 4.79
2154 2549 7.419711 AGGAAATCTCTTATTAAGACACGGA 57.580 36.000 1.90 0.00 33.12 4.69
2155 2550 9.765795 ATTAGGAAATCTCTTATTAAGACACGG 57.234 33.333 1.90 0.00 33.12 4.94
2241 2645 9.422196 GTATCTAACACGAAAAATTACATCTGC 57.578 33.333 0.00 0.00 0.00 4.26
2256 2660 4.932799 TGAACAATGTGGGTATCTAACACG 59.067 41.667 0.00 0.00 37.92 4.49
2268 2672 6.047870 TGAACCAAGAAAATGAACAATGTGG 58.952 36.000 0.00 0.00 0.00 4.17
2480 2930 4.589216 TTGAAGGACAGGCAAATTTGAG 57.411 40.909 22.31 12.38 0.00 3.02
2538 2988 2.418368 AAAGCTTGGTGTGACTGTGA 57.582 45.000 0.00 0.00 0.00 3.58
2539 2989 3.206150 AGTAAAGCTTGGTGTGACTGTG 58.794 45.455 0.00 0.00 0.00 3.66
2540 2990 3.560636 AGTAAAGCTTGGTGTGACTGT 57.439 42.857 0.00 0.00 0.00 3.55
2541 2991 4.900635 AAAGTAAAGCTTGGTGTGACTG 57.099 40.909 0.00 0.00 37.52 3.51
2542 2992 6.376018 TGTTAAAAGTAAAGCTTGGTGTGACT 59.624 34.615 0.00 0.00 37.52 3.41
2543 2993 6.557110 TGTTAAAAGTAAAGCTTGGTGTGAC 58.443 36.000 0.00 0.00 37.52 3.67
2960 3422 4.881850 ACGGGGCTAGAAATTAAGAACATG 59.118 41.667 0.00 0.00 0.00 3.21
3014 3476 2.068837 TAACCAGCGTCTTGTAACCG 57.931 50.000 0.00 0.00 0.00 4.44
3217 3697 4.136796 AGAGAACAACATGCAGCAAACTA 58.863 39.130 0.00 0.00 0.00 2.24
3220 3700 3.633525 AGAAGAGAACAACATGCAGCAAA 59.366 39.130 0.00 0.00 0.00 3.68
3275 3916 7.009540 GCCACCTCATTTTATTGAAGAAATTCG 59.990 37.037 0.00 0.00 0.00 3.34
3332 3973 8.435982 AGGATTTAGGATCTGTAAAAGGATGAG 58.564 37.037 0.00 0.00 0.00 2.90
3338 3979 8.260818 TCTCACAGGATTTAGGATCTGTAAAAG 58.739 37.037 0.00 0.00 38.27 2.27
3413 4056 5.411781 AGACATTTCTGTAGGCTAAACGAG 58.588 41.667 0.00 0.00 35.14 4.18
3414 4057 5.401531 AGACATTTCTGTAGGCTAAACGA 57.598 39.130 0.00 0.00 35.14 3.85
3415 4058 7.772332 ATAAGACATTTCTGTAGGCTAAACG 57.228 36.000 0.00 0.00 35.14 3.60
3420 4063 9.905713 TCAAAATATAAGACATTTCTGTAGGCT 57.094 29.630 0.00 0.00 35.14 4.58
3432 4075 6.540438 ACCTCCGTCTCAAAATATAAGACA 57.460 37.500 0.00 0.00 39.49 3.41
3529 4487 8.133024 TGGTCTTTGATGTTAATTAAATGCCT 57.867 30.769 0.00 0.00 0.00 4.75
3639 4612 8.284792 ACACATTTTGTCCATTCCTCATAGAGG 61.285 40.741 6.73 6.73 42.35 3.69
3739 4719 1.830477 GCTTCTCTCATCTGGACACCT 59.170 52.381 0.00 0.00 0.00 4.00
3784 4764 9.683069 GAAATTAGCTCTTGAAATTCAAAGACA 57.317 29.630 9.85 0.69 35.73 3.41
3840 4821 7.420800 GTGTGAACAGTGAAAGATTCAGAATT 58.579 34.615 0.00 0.00 41.01 2.17
3876 4860 3.415212 ACACAAGCTTGAGCACATACAT 58.585 40.909 32.50 3.08 45.16 2.29
3941 4926 1.404391 CAGCACCATCTCATGAAAGGC 59.596 52.381 0.00 0.00 0.00 4.35
4012 5073 1.672363 CGACGGTGCTACAGGTACATA 59.328 52.381 0.00 0.00 32.05 2.29
4021 5082 2.336554 TAAGTTGACGACGGTGCTAC 57.663 50.000 0.00 0.00 0.00 3.58
4055 5116 0.533085 TTGTCGACGGTGGATTTGCA 60.533 50.000 11.62 0.00 0.00 4.08
4056 5117 0.110373 GTTGTCGACGGTGGATTTGC 60.110 55.000 11.62 0.00 0.00 3.68
4057 5118 0.515564 GGTTGTCGACGGTGGATTTG 59.484 55.000 11.62 0.00 0.00 2.32
4058 5119 0.395312 AGGTTGTCGACGGTGGATTT 59.605 50.000 11.62 0.00 0.00 2.17
4059 5120 0.320421 CAGGTTGTCGACGGTGGATT 60.320 55.000 11.62 0.00 0.00 3.01
4060 5121 1.292223 CAGGTTGTCGACGGTGGAT 59.708 57.895 11.62 0.00 0.00 3.41
4061 5122 2.732016 CAGGTTGTCGACGGTGGA 59.268 61.111 11.62 0.00 0.00 4.02
4062 5123 2.167398 ATCCAGGTTGTCGACGGTGG 62.167 60.000 11.62 14.00 35.39 4.61
4063 5124 0.320421 AATCCAGGTTGTCGACGGTG 60.320 55.000 11.62 5.26 0.00 4.94
4064 5125 0.395312 AAATCCAGGTTGTCGACGGT 59.605 50.000 11.62 0.00 0.00 4.83
4065 5126 1.076332 GAAATCCAGGTTGTCGACGG 58.924 55.000 11.62 5.55 0.00 4.79
4066 5127 2.080286 AGAAATCCAGGTTGTCGACG 57.920 50.000 11.62 0.00 0.00 5.12
4067 5128 5.934935 TTTTAGAAATCCAGGTTGTCGAC 57.065 39.130 9.11 9.11 0.00 4.20
4068 5129 7.519032 AAATTTTAGAAATCCAGGTTGTCGA 57.481 32.000 0.00 0.00 0.00 4.20
4069 5130 9.289303 CATAAATTTTAGAAATCCAGGTTGTCG 57.711 33.333 0.00 0.00 0.00 4.35
4070 5131 9.087424 GCATAAATTTTAGAAATCCAGGTTGTC 57.913 33.333 0.00 0.00 0.00 3.18
4071 5132 8.592809 TGCATAAATTTTAGAAATCCAGGTTGT 58.407 29.630 0.00 0.00 0.00 3.32
4072 5133 8.872845 GTGCATAAATTTTAGAAATCCAGGTTG 58.127 33.333 0.00 0.00 0.00 3.77
4073 5134 8.815912 AGTGCATAAATTTTAGAAATCCAGGTT 58.184 29.630 0.00 0.00 0.00 3.50
4074 5135 8.366359 AGTGCATAAATTTTAGAAATCCAGGT 57.634 30.769 0.00 0.00 0.00 4.00
4075 5136 8.469200 TGAGTGCATAAATTTTAGAAATCCAGG 58.531 33.333 0.00 0.00 0.00 4.45
4076 5137 9.512435 CTGAGTGCATAAATTTTAGAAATCCAG 57.488 33.333 0.00 0.00 0.00 3.86
4077 5138 9.241919 TCTGAGTGCATAAATTTTAGAAATCCA 57.758 29.630 0.00 0.00 0.00 3.41
4089 5150 9.511272 TGCTCATATATTTCTGAGTGCATAAAT 57.489 29.630 0.00 0.00 40.80 1.40
4090 5151 8.907222 TGCTCATATATTTCTGAGTGCATAAA 57.093 30.769 0.00 0.00 40.80 1.40
4091 5152 8.907222 TTGCTCATATATTTCTGAGTGCATAA 57.093 30.769 0.00 0.00 40.80 1.90
4092 5153 8.907222 TTTGCTCATATATTTCTGAGTGCATA 57.093 30.769 0.00 0.00 40.80 3.14
4093 5154 7.812690 TTTGCTCATATATTTCTGAGTGCAT 57.187 32.000 0.00 0.00 40.80 3.96
4094 5155 7.415541 GGTTTTGCTCATATATTTCTGAGTGCA 60.416 37.037 9.86 0.00 40.80 4.57
4095 5156 6.914757 GGTTTTGCTCATATATTTCTGAGTGC 59.085 38.462 9.86 0.00 40.80 4.40
4096 5157 8.127327 CAGGTTTTGCTCATATATTTCTGAGTG 58.873 37.037 9.86 0.00 40.80 3.51
4097 5158 8.049117 TCAGGTTTTGCTCATATATTTCTGAGT 58.951 33.333 9.86 0.00 40.80 3.41
4098 5159 8.442632 TCAGGTTTTGCTCATATATTTCTGAG 57.557 34.615 5.65 5.65 41.47 3.35
4099 5160 8.806429 TTCAGGTTTTGCTCATATATTTCTGA 57.194 30.769 0.00 0.00 0.00 3.27
4105 5166 9.976511 CATCAATTTCAGGTTTTGCTCATATAT 57.023 29.630 0.00 0.00 0.00 0.86
4106 5167 8.970020 ACATCAATTTCAGGTTTTGCTCATATA 58.030 29.630 0.00 0.00 0.00 0.86
4107 5168 7.844009 ACATCAATTTCAGGTTTTGCTCATAT 58.156 30.769 0.00 0.00 0.00 1.78
4108 5169 7.230849 ACATCAATTTCAGGTTTTGCTCATA 57.769 32.000 0.00 0.00 0.00 2.15
4109 5170 6.105397 ACATCAATTTCAGGTTTTGCTCAT 57.895 33.333 0.00 0.00 0.00 2.90
4110 5171 5.534207 ACATCAATTTCAGGTTTTGCTCA 57.466 34.783 0.00 0.00 0.00 4.26
4111 5172 6.145048 CAGAACATCAATTTCAGGTTTTGCTC 59.855 38.462 0.00 0.00 0.00 4.26
4112 5173 5.987347 CAGAACATCAATTTCAGGTTTTGCT 59.013 36.000 0.00 0.00 0.00 3.91
4113 5174 5.333568 GCAGAACATCAATTTCAGGTTTTGC 60.334 40.000 9.90 9.90 40.63 3.68
4114 5175 5.987347 AGCAGAACATCAATTTCAGGTTTTG 59.013 36.000 0.00 0.00 0.00 2.44
4115 5176 5.987347 CAGCAGAACATCAATTTCAGGTTTT 59.013 36.000 0.00 0.00 0.00 2.43
4116 5177 5.302568 TCAGCAGAACATCAATTTCAGGTTT 59.697 36.000 0.00 0.00 0.00 3.27
4117 5178 4.828939 TCAGCAGAACATCAATTTCAGGTT 59.171 37.500 0.00 0.00 0.00 3.50
4118 5179 4.401022 TCAGCAGAACATCAATTTCAGGT 58.599 39.130 0.00 0.00 0.00 4.00
4119 5180 5.578005 ATCAGCAGAACATCAATTTCAGG 57.422 39.130 0.00 0.00 0.00 3.86
4120 5181 7.088272 TCAAATCAGCAGAACATCAATTTCAG 58.912 34.615 0.00 0.00 0.00 3.02
4121 5182 6.983984 TCAAATCAGCAGAACATCAATTTCA 58.016 32.000 0.00 0.00 0.00 2.69
4122 5183 7.974501 AGATCAAATCAGCAGAACATCAATTTC 59.025 33.333 0.00 0.00 0.00 2.17
4123 5184 7.759886 CAGATCAAATCAGCAGAACATCAATTT 59.240 33.333 0.00 0.00 0.00 1.82
4124 5185 7.122204 TCAGATCAAATCAGCAGAACATCAATT 59.878 33.333 0.00 0.00 0.00 2.32
4125 5186 6.602009 TCAGATCAAATCAGCAGAACATCAAT 59.398 34.615 0.00 0.00 0.00 2.57
4126 5187 5.941647 TCAGATCAAATCAGCAGAACATCAA 59.058 36.000 0.00 0.00 0.00 2.57
4127 5188 5.493809 TCAGATCAAATCAGCAGAACATCA 58.506 37.500 0.00 0.00 0.00 3.07
4128 5189 6.432607 TTCAGATCAAATCAGCAGAACATC 57.567 37.500 0.00 0.00 0.00 3.06
4129 5190 6.433404 AGTTTCAGATCAAATCAGCAGAACAT 59.567 34.615 0.00 0.00 0.00 2.71
4130 5191 5.766670 AGTTTCAGATCAAATCAGCAGAACA 59.233 36.000 0.00 0.00 0.00 3.18
4131 5192 6.251655 AGTTTCAGATCAAATCAGCAGAAC 57.748 37.500 0.00 0.00 0.00 3.01
4132 5193 6.889301 AAGTTTCAGATCAAATCAGCAGAA 57.111 33.333 0.00 0.00 0.00 3.02
4133 5194 6.889301 AAAGTTTCAGATCAAATCAGCAGA 57.111 33.333 0.00 0.00 0.00 4.26
4134 5195 7.368833 AGAAAAGTTTCAGATCAAATCAGCAG 58.631 34.615 6.56 0.00 39.61 4.24
4135 5196 7.013559 TGAGAAAAGTTTCAGATCAAATCAGCA 59.986 33.333 6.56 0.00 39.61 4.41
4136 5197 7.365741 TGAGAAAAGTTTCAGATCAAATCAGC 58.634 34.615 6.56 0.00 39.61 4.26
4137 5198 9.740239 TTTGAGAAAAGTTTCAGATCAAATCAG 57.260 29.630 12.22 0.00 35.64 2.90
4138 5199 9.520204 GTTTGAGAAAAGTTTCAGATCAAATCA 57.480 29.630 16.34 4.46 39.18 2.57
4139 5200 9.520204 TGTTTGAGAAAAGTTTCAGATCAAATC 57.480 29.630 16.34 12.56 39.18 2.17
4141 5202 9.874205 AATGTTTGAGAAAAGTTTCAGATCAAA 57.126 25.926 12.22 12.22 36.94 2.69
4143 5204 9.950680 GTAATGTTTGAGAAAAGTTTCAGATCA 57.049 29.630 6.56 0.00 39.61 2.92
4155 5216 9.729023 CACACACAATAAGTAATGTTTGAGAAA 57.271 29.630 0.82 0.00 32.86 2.52
4156 5217 8.349245 CCACACACAATAAGTAATGTTTGAGAA 58.651 33.333 0.82 0.00 32.86 2.87
4157 5218 7.717436 TCCACACACAATAAGTAATGTTTGAGA 59.283 33.333 0.82 0.00 32.86 3.27
4158 5219 7.870826 TCCACACACAATAAGTAATGTTTGAG 58.129 34.615 0.82 0.00 32.86 3.02
4159 5220 7.809546 TCCACACACAATAAGTAATGTTTGA 57.190 32.000 0.82 0.00 32.86 2.69
4160 5221 8.134895 AGTTCCACACACAATAAGTAATGTTTG 58.865 33.333 0.00 0.00 34.31 2.93
4161 5222 8.232913 AGTTCCACACACAATAAGTAATGTTT 57.767 30.769 0.00 0.00 28.96 2.83
4162 5223 7.719633 AGAGTTCCACACACAATAAGTAATGTT 59.280 33.333 0.00 0.00 28.96 2.71
4163 5224 7.224297 AGAGTTCCACACACAATAAGTAATGT 58.776 34.615 0.00 0.00 30.94 2.71
4164 5225 7.672983 AGAGTTCCACACACAATAAGTAATG 57.327 36.000 0.00 0.00 0.00 1.90
4165 5226 9.383519 CATAGAGTTCCACACACAATAAGTAAT 57.616 33.333 0.00 0.00 0.00 1.89
4166 5227 8.372459 ACATAGAGTTCCACACACAATAAGTAA 58.628 33.333 0.00 0.00 0.00 2.24
4167 5228 7.903145 ACATAGAGTTCCACACACAATAAGTA 58.097 34.615 0.00 0.00 0.00 2.24
4168 5229 6.769512 ACATAGAGTTCCACACACAATAAGT 58.230 36.000 0.00 0.00 0.00 2.24
4169 5230 7.173218 ACAACATAGAGTTCCACACACAATAAG 59.827 37.037 0.00 0.00 38.74 1.73
4170 5231 6.995686 ACAACATAGAGTTCCACACACAATAA 59.004 34.615 0.00 0.00 38.74 1.40
4171 5232 6.426633 CACAACATAGAGTTCCACACACAATA 59.573 38.462 0.00 0.00 38.74 1.90
4172 5233 5.239306 CACAACATAGAGTTCCACACACAAT 59.761 40.000 0.00 0.00 38.74 2.71
4173 5234 4.574421 CACAACATAGAGTTCCACACACAA 59.426 41.667 0.00 0.00 38.74 3.33
4174 5235 4.126437 CACAACATAGAGTTCCACACACA 58.874 43.478 0.00 0.00 38.74 3.72
4175 5236 3.058914 GCACAACATAGAGTTCCACACAC 60.059 47.826 0.00 0.00 38.74 3.82
4176 5237 3.138304 GCACAACATAGAGTTCCACACA 58.862 45.455 0.00 0.00 38.74 3.72
4177 5238 2.484264 GGCACAACATAGAGTTCCACAC 59.516 50.000 0.00 0.00 38.74 3.82
4178 5239 2.371841 AGGCACAACATAGAGTTCCACA 59.628 45.455 0.00 0.00 38.74 4.17
4179 5240 2.744202 CAGGCACAACATAGAGTTCCAC 59.256 50.000 0.00 0.00 38.74 4.02
4180 5241 2.637382 TCAGGCACAACATAGAGTTCCA 59.363 45.455 0.00 0.00 38.74 3.53
4181 5242 3.334583 TCAGGCACAACATAGAGTTCC 57.665 47.619 0.00 0.00 38.74 3.62
4182 5243 5.665459 ACTATCAGGCACAACATAGAGTTC 58.335 41.667 0.00 0.00 38.74 3.01
4183 5244 5.683876 ACTATCAGGCACAACATAGAGTT 57.316 39.130 0.00 0.00 42.42 3.01
4184 5245 5.683876 AACTATCAGGCACAACATAGAGT 57.316 39.130 0.00 0.00 0.00 3.24
4185 5246 8.668510 AAATAACTATCAGGCACAACATAGAG 57.331 34.615 0.00 0.00 0.00 2.43
4186 5247 8.486210 AGAAATAACTATCAGGCACAACATAGA 58.514 33.333 0.00 0.00 0.00 1.98
4187 5248 8.668510 AGAAATAACTATCAGGCACAACATAG 57.331 34.615 0.00 0.00 0.00 2.23
4189 5250 9.461312 TTTAGAAATAACTATCAGGCACAACAT 57.539 29.630 0.00 0.00 0.00 2.71
4190 5251 8.856153 TTTAGAAATAACTATCAGGCACAACA 57.144 30.769 0.00 0.00 0.00 3.33
4191 5252 9.774742 CTTTTAGAAATAACTATCAGGCACAAC 57.225 33.333 0.00 0.00 0.00 3.32
4192 5253 9.515226 ACTTTTAGAAATAACTATCAGGCACAA 57.485 29.630 0.00 0.00 0.00 3.33
4193 5254 8.946085 CACTTTTAGAAATAACTATCAGGCACA 58.054 33.333 0.00 0.00 0.00 4.57
4194 5255 8.398665 CCACTTTTAGAAATAACTATCAGGCAC 58.601 37.037 0.00 0.00 0.00 5.01
4195 5256 8.107095 ACCACTTTTAGAAATAACTATCAGGCA 58.893 33.333 0.00 0.00 0.00 4.75
4196 5257 8.507524 ACCACTTTTAGAAATAACTATCAGGC 57.492 34.615 0.00 0.00 0.00 4.85
4197 5258 9.892130 AGACCACTTTTAGAAATAACTATCAGG 57.108 33.333 0.00 0.00 0.00 3.86
4208 5269 9.774413 CCTAACTTTAGAGACCACTTTTAGAAA 57.226 33.333 0.00 0.00 32.47 2.52
4209 5270 7.876582 GCCTAACTTTAGAGACCACTTTTAGAA 59.123 37.037 0.00 0.00 32.47 2.10
4210 5271 7.234988 AGCCTAACTTTAGAGACCACTTTTAGA 59.765 37.037 0.00 0.00 32.47 2.10
4211 5272 7.387643 AGCCTAACTTTAGAGACCACTTTTAG 58.612 38.462 0.00 0.00 32.47 1.85
4212 5273 7.015877 TGAGCCTAACTTTAGAGACCACTTTTA 59.984 37.037 0.00 0.00 32.47 1.52
4213 5274 6.183361 TGAGCCTAACTTTAGAGACCACTTTT 60.183 38.462 0.00 0.00 32.47 2.27
4214 5275 5.307196 TGAGCCTAACTTTAGAGACCACTTT 59.693 40.000 0.00 0.00 32.47 2.66
4215 5276 4.838986 TGAGCCTAACTTTAGAGACCACTT 59.161 41.667 0.00 0.00 32.47 3.16
4216 5277 4.417437 TGAGCCTAACTTTAGAGACCACT 58.583 43.478 0.00 0.00 32.47 4.00
4217 5278 4.803098 TGAGCCTAACTTTAGAGACCAC 57.197 45.455 0.00 0.00 32.47 4.16
4218 5279 5.818678 TTTGAGCCTAACTTTAGAGACCA 57.181 39.130 0.00 0.00 32.47 4.02
4219 5280 6.645306 AGATTTGAGCCTAACTTTAGAGACC 58.355 40.000 0.00 0.00 32.47 3.85
4220 5281 8.554835 AAAGATTTGAGCCTAACTTTAGAGAC 57.445 34.615 0.00 0.00 32.47 3.36
4227 5288 9.920946 TCCATATTAAAGATTTGAGCCTAACTT 57.079 29.630 0.00 0.00 0.00 2.66
4228 5289 9.566432 CTCCATATTAAAGATTTGAGCCTAACT 57.434 33.333 0.00 0.00 0.00 2.24
4229 5290 9.561069 TCTCCATATTAAAGATTTGAGCCTAAC 57.439 33.333 0.00 0.00 0.00 2.34
4231 5292 9.730705 CATCTCCATATTAAAGATTTGAGCCTA 57.269 33.333 0.00 0.00 0.00 3.93
4232 5293 8.223330 ACATCTCCATATTAAAGATTTGAGCCT 58.777 33.333 0.00 0.00 0.00 4.58
4233 5294 8.295288 CACATCTCCATATTAAAGATTTGAGCC 58.705 37.037 0.00 0.00 31.77 4.70
4234 5295 8.844244 ACACATCTCCATATTAAAGATTTGAGC 58.156 33.333 7.07 0.00 33.49 4.26
4246 5307 9.388506 CTGAGTTCTTTAACACATCTCCATATT 57.611 33.333 0.00 0.00 35.94 1.28
4247 5308 8.543774 ACTGAGTTCTTTAACACATCTCCATAT 58.456 33.333 0.00 0.00 35.94 1.78
4248 5309 7.819415 CACTGAGTTCTTTAACACATCTCCATA 59.181 37.037 0.00 0.00 35.94 2.74
4249 5310 6.652481 CACTGAGTTCTTTAACACATCTCCAT 59.348 38.462 0.00 0.00 35.94 3.41
4250 5311 5.991606 CACTGAGTTCTTTAACACATCTCCA 59.008 40.000 0.00 0.00 35.94 3.86
4251 5312 5.992217 ACACTGAGTTCTTTAACACATCTCC 59.008 40.000 0.00 0.00 35.94 3.71
4252 5313 6.129062 CGACACTGAGTTCTTTAACACATCTC 60.129 42.308 0.00 0.00 35.94 2.75
4253 5314 5.692204 CGACACTGAGTTCTTTAACACATCT 59.308 40.000 0.00 0.00 35.94 2.90
4254 5315 5.107453 CCGACACTGAGTTCTTTAACACATC 60.107 44.000 0.00 0.00 35.94 3.06
4255 5316 4.750098 CCGACACTGAGTTCTTTAACACAT 59.250 41.667 0.00 0.00 35.94 3.21
4256 5317 4.116961 CCGACACTGAGTTCTTTAACACA 58.883 43.478 0.00 0.00 38.12 3.72
4257 5318 4.365723 TCCGACACTGAGTTCTTTAACAC 58.634 43.478 0.00 0.00 38.12 3.32
4258 5319 4.659111 TCCGACACTGAGTTCTTTAACA 57.341 40.909 0.00 0.00 38.12 2.41
4259 5320 4.389077 CCATCCGACACTGAGTTCTTTAAC 59.611 45.833 0.00 0.00 35.72 2.01
4260 5321 4.282449 TCCATCCGACACTGAGTTCTTTAA 59.718 41.667 0.00 0.00 0.00 1.52
4261 5322 3.830178 TCCATCCGACACTGAGTTCTTTA 59.170 43.478 0.00 0.00 0.00 1.85
4262 5323 2.632996 TCCATCCGACACTGAGTTCTTT 59.367 45.455 0.00 0.00 0.00 2.52
4263 5324 2.028930 GTCCATCCGACACTGAGTTCTT 60.029 50.000 0.00 0.00 41.54 2.52
4264 5325 1.546476 GTCCATCCGACACTGAGTTCT 59.454 52.381 0.00 0.00 41.54 3.01
4265 5326 1.546476 AGTCCATCCGACACTGAGTTC 59.454 52.381 0.00 0.00 44.66 3.01
4266 5327 1.546476 GAGTCCATCCGACACTGAGTT 59.454 52.381 0.00 0.00 44.66 3.01
4267 5328 1.178276 GAGTCCATCCGACACTGAGT 58.822 55.000 0.00 0.00 44.66 3.41
4268 5329 1.177401 TGAGTCCATCCGACACTGAG 58.823 55.000 0.00 0.00 44.66 3.35
4269 5330 1.852633 ATGAGTCCATCCGACACTGA 58.147 50.000 0.00 0.00 44.66 3.41
4270 5331 2.680312 AATGAGTCCATCCGACACTG 57.320 50.000 0.00 0.00 44.66 3.66
4271 5332 3.007940 TCAAAATGAGTCCATCCGACACT 59.992 43.478 0.00 0.00 44.66 3.55
4272 5333 3.334691 TCAAAATGAGTCCATCCGACAC 58.665 45.455 0.00 0.00 44.66 3.67
4273 5334 3.260632 TCTCAAAATGAGTCCATCCGACA 59.739 43.478 7.21 0.00 44.58 4.35
4274 5335 3.619038 GTCTCAAAATGAGTCCATCCGAC 59.381 47.826 7.21 0.00 44.58 4.79
4275 5336 3.260632 TGTCTCAAAATGAGTCCATCCGA 59.739 43.478 7.21 0.00 44.58 4.55
4276 5337 3.372206 GTGTCTCAAAATGAGTCCATCCG 59.628 47.826 7.21 0.00 44.58 4.18
4277 5338 4.394300 CAGTGTCTCAAAATGAGTCCATCC 59.606 45.833 7.21 0.00 44.58 3.51
4278 5339 5.240891 TCAGTGTCTCAAAATGAGTCCATC 58.759 41.667 7.21 2.58 44.58 3.51
4279 5340 5.012458 TCTCAGTGTCTCAAAATGAGTCCAT 59.988 40.000 7.21 0.00 44.58 3.41
4280 5341 4.344968 TCTCAGTGTCTCAAAATGAGTCCA 59.655 41.667 7.21 3.52 44.58 4.02
4281 5342 4.887748 TCTCAGTGTCTCAAAATGAGTCC 58.112 43.478 7.21 1.21 44.58 3.85
4282 5343 5.931146 ACATCTCAGTGTCTCAAAATGAGTC 59.069 40.000 7.21 2.89 44.58 3.36
4283 5344 5.699915 CACATCTCAGTGTCTCAAAATGAGT 59.300 40.000 7.21 0.00 44.58 3.41
4284 5345 5.390673 GCACATCTCAGTGTCTCAAAATGAG 60.391 44.000 0.88 0.88 41.45 2.90
4285 5346 4.453478 GCACATCTCAGTGTCTCAAAATGA 59.547 41.667 0.00 0.00 41.52 2.57
4286 5347 4.379186 GGCACATCTCAGTGTCTCAAAATG 60.379 45.833 0.00 0.00 40.82 2.32
4287 5348 3.755378 GGCACATCTCAGTGTCTCAAAAT 59.245 43.478 0.00 0.00 40.82 1.82
4288 5349 3.141398 GGCACATCTCAGTGTCTCAAAA 58.859 45.455 0.00 0.00 40.82 2.44
4289 5350 2.104622 TGGCACATCTCAGTGTCTCAAA 59.895 45.455 0.00 0.00 44.21 2.69
4290 5351 1.693606 TGGCACATCTCAGTGTCTCAA 59.306 47.619 0.00 0.00 44.21 3.02
4291 5352 1.341080 TGGCACATCTCAGTGTCTCA 58.659 50.000 0.00 0.00 44.21 3.27
4304 5365 9.672670 CTGTACCAGAGACAAATAGATGGCACA 62.673 44.444 0.00 0.00 36.61 4.57
4305 5366 3.878778 ACCAGAGACAAATAGATGGCAC 58.121 45.455 0.00 0.00 0.00 5.01
4306 5367 4.469586 TGTACCAGAGACAAATAGATGGCA 59.530 41.667 0.00 0.00 0.00 4.92
4307 5368 5.023533 TGTACCAGAGACAAATAGATGGC 57.976 43.478 0.00 0.00 0.00 4.40
4308 5369 6.045318 CACTGTACCAGAGACAAATAGATGG 58.955 44.000 0.00 0.00 35.18 3.51
4309 5370 6.634805 ACACTGTACCAGAGACAAATAGATG 58.365 40.000 0.00 0.00 35.18 2.90
4310 5371 6.859112 ACACTGTACCAGAGACAAATAGAT 57.141 37.500 0.00 0.00 35.18 1.98
4311 5372 6.717997 TGTACACTGTACCAGAGACAAATAGA 59.282 38.462 15.37 0.00 35.18 1.98
4312 5373 6.920817 TGTACACTGTACCAGAGACAAATAG 58.079 40.000 15.37 0.00 35.18 1.73
4313 5374 6.904463 TGTACACTGTACCAGAGACAAATA 57.096 37.500 15.37 0.00 35.18 1.40
4314 5375 5.801531 TGTACACTGTACCAGAGACAAAT 57.198 39.130 15.37 0.00 35.18 2.32
4315 5376 5.801531 ATGTACACTGTACCAGAGACAAA 57.198 39.130 15.37 0.00 35.18 2.83
4316 5377 5.801531 AATGTACACTGTACCAGAGACAA 57.198 39.130 15.37 0.00 35.18 3.18
4317 5378 5.801531 AAATGTACACTGTACCAGAGACA 57.198 39.130 15.37 0.00 35.18 3.41
4396 5457 3.435105 ACGCAAAGAAATTGTTGCTGA 57.565 38.095 15.67 0.00 46.35 4.26
4406 5467 9.378551 AGTCTGTAATATATCAACGCAAAGAAA 57.621 29.630 0.00 0.00 0.00 2.52
4407 5468 8.942338 AGTCTGTAATATATCAACGCAAAGAA 57.058 30.769 0.00 0.00 0.00 2.52
4461 5599 4.007282 TCTGTTATTCGGTACTCGTTCG 57.993 45.455 0.00 0.00 40.32 3.95
4510 5648 3.923461 GCGAGGCATATGATAACTCAGTC 59.077 47.826 6.97 0.00 34.12 3.51
4519 5657 1.051008 TGACCAGCGAGGCATATGAT 58.949 50.000 6.97 0.00 43.14 2.45
4558 5696 3.206412 AGATCATACTGGAGACTGACCCT 59.794 47.826 0.00 0.00 0.00 4.34
4560 5698 5.606348 AAAGATCATACTGGAGACTGACC 57.394 43.478 0.00 0.00 0.00 4.02
4588 5726 3.972133 TCATGAATCAGCAAGAATGGGT 58.028 40.909 0.00 0.00 0.00 4.51
4602 5740 4.794762 CGATGTTTCACGCAATTCATGAAT 59.205 37.500 15.36 15.36 32.61 2.57
4606 5744 4.621068 ATCGATGTTTCACGCAATTCAT 57.379 36.364 0.00 0.00 0.00 2.57
4609 5747 4.406069 CAGAATCGATGTTTCACGCAATT 58.594 39.130 0.00 0.00 0.00 2.32
4615 5753 3.063180 CAGAGGCAGAATCGATGTTTCAC 59.937 47.826 0.00 0.00 0.00 3.18
4639 5777 2.676471 GTTGCCGACCCCTTGCAT 60.676 61.111 0.00 0.00 34.51 3.96
4651 5789 4.627035 GCAGGAAATCTAACATTTGTTGCC 59.373 41.667 6.21 0.00 38.90 4.52
4652 5790 5.473039 AGCAGGAAATCTAACATTTGTTGC 58.527 37.500 6.21 0.00 38.90 4.17
4687 5825 7.237471 ACCATCAAAAATGAATTAGGGGAAACT 59.763 33.333 0.00 0.00 0.00 2.66
4729 5867 5.589452 GGCATTCAGAGAATCAACTCATTCT 59.411 40.000 0.00 0.00 44.37 2.40
4788 5926 1.203440 ACATACAGGTCTGGTCCCCTT 60.203 52.381 2.87 0.00 34.19 3.95
4807 5945 6.127869 GGAGGAAAGAGAAGAGGCAAAATAAC 60.128 42.308 0.00 0.00 0.00 1.89


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.