Multiple sequence alignment - TraesCS7D01G167200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G167200 chr7D 100.000 1851 0 0 1808 3658 117678971 117677121 0.000000e+00 3419.0
1 TraesCS7D01G167200 chr7D 100.000 1533 0 0 1 1533 117680778 117679246 0.000000e+00 2832.0
2 TraesCS7D01G167200 chr7A 96.503 1144 33 3 393 1533 122042401 122041262 0.000000e+00 1884.0
3 TraesCS7D01G167200 chr7A 91.573 1151 55 20 1808 2951 122041220 122040105 0.000000e+00 1550.0
4 TraesCS7D01G167200 chr7A 89.197 361 24 6 16 369 122042745 122042393 1.560000e-118 436.0
5 TraesCS7D01G167200 chr7A 82.704 318 25 11 2953 3268 122040146 122039857 4.690000e-64 255.0
6 TraesCS7D01G167200 chr5B 85.185 108 7 2 3547 3645 377624895 377625002 6.460000e-18 102.0
7 TraesCS7D01G167200 chr4B 86.139 101 5 4 3554 3645 605839295 605839195 2.320000e-17 100.0
8 TraesCS7D01G167200 chr4B 86.301 73 6 3 3377 3447 4473218 4473288 3.920000e-10 76.8
9 TraesCS7D01G167200 chr4B 86.111 72 6 3 3378 3447 4405358 4405427 1.410000e-09 75.0
10 TraesCS7D01G167200 chr4B 86.111 72 6 3 3378 3447 4438666 4438735 1.410000e-09 75.0
11 TraesCS7D01G167200 chr4B 85.915 71 7 2 3378 3447 4446327 4446395 5.070000e-09 73.1
12 TraesCS7D01G167200 chr7B 92.424 66 3 1 3382 3447 46896737 46896800 3.890000e-15 93.5
13 TraesCS7D01G167200 chr2D 86.076 79 9 1 3382 3460 544854560 544854484 2.340000e-12 84.2
14 TraesCS7D01G167200 chr4D 86.301 73 6 3 3377 3447 4148173 4148103 3.920000e-10 76.8
15 TraesCS7D01G167200 chr3B 87.692 65 6 1 3383 3447 824164349 824164411 1.410000e-09 75.0
16 TraesCS7D01G167200 chr3D 92.308 52 2 1 3380 3431 127332800 127332849 5.070000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G167200 chr7D 117677121 117680778 3657 True 3125.50 3419 100.00000 1 3658 2 chr7D.!!$R1 3657
1 TraesCS7D01G167200 chr7A 122039857 122042745 2888 True 1031.25 1884 89.99425 16 3268 4 chr7A.!!$R1 3252

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
732 740 0.543277 TCTCATGGTGGATGGTCTGC 59.457 55.0 0.0 0.0 32.26 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2728 2745 0.461548 TAGCAGCCCATGAGACTTCG 59.538 55.0 0.0 0.0 0.0 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 1.026718 AAATCTTTGCTCGGGGCTCG 61.027 55.000 0.00 0.00 42.39 5.03
40 41 4.319177 GGCTCGGATTGCTCAAATAGTAT 58.681 43.478 0.00 0.00 0.00 2.12
85 93 2.025037 AGCATCCTGGATGGTTTAGCAA 60.025 45.455 30.34 0.00 46.65 3.91
91 99 3.763360 CCTGGATGGTTTAGCAATGTCAA 59.237 43.478 0.00 0.00 0.00 3.18
115 123 4.269183 TCAGTGTGGTCATGTTCAGTTTT 58.731 39.130 0.00 0.00 0.00 2.43
116 124 4.335315 TCAGTGTGGTCATGTTCAGTTTTC 59.665 41.667 0.00 0.00 0.00 2.29
131 139 3.490526 CAGTTTTCGTTTTGCCTGGATTG 59.509 43.478 0.00 0.00 0.00 2.67
136 144 2.034053 TCGTTTTGCCTGGATTGTTGAC 59.966 45.455 0.00 0.00 0.00 3.18
141 149 1.234821 GCCTGGATTGTTGACGTTGA 58.765 50.000 0.00 0.00 0.00 3.18
142 150 1.606668 GCCTGGATTGTTGACGTTGAA 59.393 47.619 0.00 0.00 0.00 2.69
150 158 2.816689 TGTTGACGTTGAATGTCTCGT 58.183 42.857 17.45 0.00 35.24 4.18
151 159 3.967401 TGTTGACGTTGAATGTCTCGTA 58.033 40.909 17.45 0.00 35.24 3.43
152 160 4.361420 TGTTGACGTTGAATGTCTCGTAA 58.639 39.130 17.45 2.04 35.24 3.18
193 201 9.949174 CCAAAAATAAAATGAAAAAGAACTGGG 57.051 29.630 0.00 0.00 0.00 4.45
214 222 1.133823 TCTGCTTGGCTTGGTTTCTCA 60.134 47.619 0.00 0.00 0.00 3.27
218 226 2.094854 GCTTGGCTTGGTTTCTCAGATG 60.095 50.000 0.00 0.00 0.00 2.90
252 260 6.591750 TTTTCTGACCCGGCATTTAATTAA 57.408 33.333 0.00 0.00 0.00 1.40
253 261 6.783708 TTTCTGACCCGGCATTTAATTAAT 57.216 33.333 0.00 0.00 0.00 1.40
254 262 7.883391 TTTCTGACCCGGCATTTAATTAATA 57.117 32.000 0.00 0.00 0.00 0.98
263 271 9.248291 CCCGGCATTTAATTAATATTATCATGC 57.752 33.333 15.62 15.62 39.60 4.06
282 290 5.244402 TCATGCTTTTCAATCCTGTTGTCAT 59.756 36.000 0.00 0.00 0.00 3.06
321 329 4.212636 GCTGTTTGCTTAAGTTTCCGACTA 59.787 41.667 4.02 0.00 36.73 2.59
332 340 6.555812 AAGTTTCCGACTACTTTTCAATCC 57.444 37.500 0.00 0.00 37.72 3.01
372 380 9.826574 TGACTGTACTTAAAATGTTTACTGTCT 57.173 29.630 13.10 0.00 39.99 3.41
374 382 8.557029 ACTGTACTTAAAATGTTTACTGTCTGC 58.443 33.333 0.00 0.00 0.00 4.26
375 383 8.671384 TGTACTTAAAATGTTTACTGTCTGCT 57.329 30.769 0.00 0.00 0.00 4.24
376 384 8.556194 TGTACTTAAAATGTTTACTGTCTGCTG 58.444 33.333 0.00 0.00 0.00 4.41
377 385 7.801716 ACTTAAAATGTTTACTGTCTGCTGA 57.198 32.000 0.00 0.00 0.00 4.26
378 386 8.396272 ACTTAAAATGTTTACTGTCTGCTGAT 57.604 30.769 0.00 0.00 0.00 2.90
379 387 8.292448 ACTTAAAATGTTTACTGTCTGCTGATG 58.708 33.333 0.00 0.00 0.00 3.07
380 388 6.882610 AAAATGTTTACTGTCTGCTGATGA 57.117 33.333 0.00 0.00 0.00 2.92
381 389 6.492007 AAATGTTTACTGTCTGCTGATGAG 57.508 37.500 0.00 0.00 0.00 2.90
382 390 3.930336 TGTTTACTGTCTGCTGATGAGG 58.070 45.455 0.00 0.00 0.00 3.86
383 391 3.578282 TGTTTACTGTCTGCTGATGAGGA 59.422 43.478 0.00 0.00 0.00 3.71
384 392 4.223700 TGTTTACTGTCTGCTGATGAGGAT 59.776 41.667 0.00 0.00 0.00 3.24
385 393 5.181748 GTTTACTGTCTGCTGATGAGGATT 58.818 41.667 0.00 0.00 0.00 3.01
386 394 3.263489 ACTGTCTGCTGATGAGGATTG 57.737 47.619 0.00 0.00 0.00 2.67
387 395 2.570752 ACTGTCTGCTGATGAGGATTGT 59.429 45.455 0.00 0.00 0.00 2.71
388 396 3.771479 ACTGTCTGCTGATGAGGATTGTA 59.229 43.478 0.00 0.00 0.00 2.41
389 397 4.223700 ACTGTCTGCTGATGAGGATTGTAA 59.776 41.667 0.00 0.00 0.00 2.41
390 398 5.104610 ACTGTCTGCTGATGAGGATTGTAAT 60.105 40.000 0.00 0.00 0.00 1.89
391 399 5.363101 TGTCTGCTGATGAGGATTGTAATC 58.637 41.667 0.00 0.00 34.66 1.75
432 440 7.402054 TCTGACTGGGCTTTTCAATCTTATTA 58.598 34.615 0.00 0.00 0.00 0.98
483 491 6.036470 GCTTAAGTTTCTGACTGTGCTTTTT 58.964 36.000 4.02 0.00 39.00 1.94
518 526 6.037172 TGTCTGTTTGCTTAAGTTTCTGACTC 59.963 38.462 4.02 0.00 37.72 3.36
521 529 5.208503 GTTTGCTTAAGTTTCTGACTCTGC 58.791 41.667 4.02 0.00 37.72 4.26
539 547 3.684305 TCTGCATTACAATCCTGTTGTCG 59.316 43.478 0.00 0.00 36.96 4.35
561 569 8.244113 TGTCGTATGCTGGATATTATCTTGTAG 58.756 37.037 3.77 0.32 0.00 2.74
564 572 8.864024 CGTATGCTGGATATTATCTTGTAGTTG 58.136 37.037 3.77 0.00 0.00 3.16
732 740 0.543277 TCTCATGGTGGATGGTCTGC 59.457 55.000 0.00 0.00 32.26 4.26
740 748 3.202818 TGGTGGATGGTCTGCATATCTTT 59.797 43.478 0.00 0.00 0.00 2.52
927 935 0.835971 TCCAGTTGCCTGCTGAGGTA 60.836 55.000 0.00 0.00 42.15 3.08
940 949 2.797792 GCTGAGGTAGTGAGAAGCATCG 60.798 54.545 0.00 0.00 0.00 3.84
944 953 2.826128 AGGTAGTGAGAAGCATCGTTCA 59.174 45.455 0.00 0.00 0.00 3.18
946 955 3.119459 GGTAGTGAGAAGCATCGTTCAGA 60.119 47.826 0.00 0.00 0.00 3.27
958 967 3.664551 TCGTTCAGAGGGAGATAAGGA 57.335 47.619 0.00 0.00 0.00 3.36
973 982 0.693767 AAGGAGGATGCAGAGGGAGG 60.694 60.000 0.00 0.00 0.00 4.30
1127 1136 5.050490 GCGTATGGTATGTTCTGACTTCAT 58.950 41.667 0.00 0.00 0.00 2.57
1154 1163 2.221169 TCTGTTGTCTGATGTTGTGGC 58.779 47.619 0.00 0.00 0.00 5.01
1164 1173 3.489355 TGATGTTGTGGCTTGAGACATT 58.511 40.909 0.00 0.00 34.33 2.71
1294 1305 4.693566 TGTGAGTTCGTTTGTTCAACTTCT 59.306 37.500 0.00 0.00 32.53 2.85
1348 1359 2.285756 TGACTCGTTTTGGTGCGTAAAG 59.714 45.455 0.00 0.00 0.00 1.85
1371 1382 5.237344 AGTGTTTACTGTCTGCTGTTCATTC 59.763 40.000 0.00 0.00 35.34 2.67
1376 1387 1.202639 TGTCTGCTGTTCATTCGGTGT 60.203 47.619 0.00 0.00 0.00 4.16
1406 1417 4.406972 TCTTGATAACTACTGAGCTGGCAT 59.593 41.667 0.00 0.00 0.00 4.40
1488 1499 1.348696 TGTCTGATGGCTCTGAGCAAA 59.651 47.619 28.95 17.81 44.75 3.68
1891 1904 2.107378 TGATGTGTTGAGGCCTGGTTTA 59.893 45.455 12.00 0.00 0.00 2.01
1950 1963 2.021355 TCGAAGGTACCGACTCTCTC 57.979 55.000 6.18 0.00 0.00 3.20
1976 1989 1.066716 GGCTGTGTATGAACGGTGGTA 60.067 52.381 0.00 0.00 0.00 3.25
2000 2013 4.746535 TTCCTGCCGTGTAGATAATCAA 57.253 40.909 0.00 0.00 0.00 2.57
2043 2056 4.023980 TGGACCTTCAGTATCGTCATCTT 58.976 43.478 0.00 0.00 0.00 2.40
2058 2071 4.870426 CGTCATCTTGGTGCTTGTATAACT 59.130 41.667 0.00 0.00 0.00 2.24
2104 2117 3.060339 GCCAATTGTTTCGTTTTCTGCTG 60.060 43.478 4.43 0.00 0.00 4.41
2175 2188 1.201429 AGTCCCTCGATGCTTTGGGT 61.201 55.000 5.18 0.00 40.48 4.51
2183 2196 1.523154 GATGCTTTGGGTGCGGTTGA 61.523 55.000 0.00 0.00 0.00 3.18
2187 2200 0.109781 CTTTGGGTGCGGTTGATTCG 60.110 55.000 0.00 0.00 0.00 3.34
2197 2210 1.265635 CGGTTGATTCGCTTGAAACCA 59.734 47.619 3.99 0.00 32.01 3.67
2208 2221 1.172180 TTGAAACCAAGCTCCTGCGG 61.172 55.000 0.00 0.00 45.42 5.69
2236 2249 3.375647 AGTACACCTGTGGTTTGGTTT 57.624 42.857 1.91 0.00 31.02 3.27
2250 2263 4.948004 GGTTTGGTTTTATCGGAAGGAGAT 59.052 41.667 0.00 0.00 0.00 2.75
2276 2289 3.316308 GGTGCTTCTTTCACAATGTGAGT 59.684 43.478 16.10 0.00 43.69 3.41
2284 2297 8.450578 TTCTTTCACAATGTGAGTCAGTTATT 57.549 30.769 16.10 0.00 43.69 1.40
2306 2319 2.195922 GTGGCTTTTCTGCACAACTTG 58.804 47.619 0.00 0.00 34.04 3.16
2311 2324 4.499696 GGCTTTTCTGCACAACTTGTACAT 60.500 41.667 0.00 0.00 34.04 2.29
2312 2325 5.043248 GCTTTTCTGCACAACTTGTACATT 58.957 37.500 0.00 0.00 0.00 2.71
2314 2327 6.695278 GCTTTTCTGCACAACTTGTACATTAA 59.305 34.615 0.00 0.00 0.00 1.40
2315 2328 7.382218 GCTTTTCTGCACAACTTGTACATTAAT 59.618 33.333 0.00 0.00 0.00 1.40
2325 2338 9.142515 ACAACTTGTACATTAATCATTGCATTG 57.857 29.630 0.00 2.08 0.00 2.82
2396 2409 5.292834 CGTTCTCACAGCAACTTATCATCAT 59.707 40.000 0.00 0.00 0.00 2.45
2450 2463 1.215014 TGCAGCGTGTTCTGTCTTCG 61.215 55.000 0.00 0.00 36.49 3.79
2468 2481 1.605232 TCGAACGACAGCACTCTTACA 59.395 47.619 0.00 0.00 0.00 2.41
2477 2490 0.796927 GCACTCTTACAGCGGGTTTC 59.203 55.000 0.00 0.00 0.00 2.78
2520 2533 0.109723 AACGGTGAAGGCCAAGCTTA 59.890 50.000 5.01 0.00 0.00 3.09
2538 2551 1.960040 TAGCAGTGATGGAGCGGTGG 61.960 60.000 0.00 0.00 0.00 4.61
2540 2553 2.607750 AGTGATGGAGCGGTGGGT 60.608 61.111 0.00 0.00 0.00 4.51
2552 2565 3.311110 GTGGGTGTCCTGCTCCGA 61.311 66.667 0.00 0.00 0.00 4.55
2627 2640 1.816224 GCGCCTCAAAAGGATACCAAA 59.184 47.619 0.00 0.00 46.67 3.28
2645 2658 4.190772 CCAAATTTGGTCTTTGTGTTGCT 58.809 39.130 26.34 0.00 43.43 3.91
2726 2743 2.467838 CAGTATGTGCTGGTCGATGAG 58.532 52.381 0.00 0.00 33.11 2.90
2727 2744 2.103373 AGTATGTGCTGGTCGATGAGT 58.897 47.619 0.00 0.00 0.00 3.41
2728 2745 2.099921 AGTATGTGCTGGTCGATGAGTC 59.900 50.000 0.00 0.00 0.00 3.36
2748 2765 1.069823 CGAAGTCTCATGGGCTGCTAT 59.930 52.381 0.00 0.00 0.00 2.97
2749 2766 2.484417 CGAAGTCTCATGGGCTGCTATT 60.484 50.000 0.00 0.00 0.00 1.73
2750 2767 3.243873 CGAAGTCTCATGGGCTGCTATTA 60.244 47.826 0.00 0.00 0.00 0.98
2751 2768 4.562347 CGAAGTCTCATGGGCTGCTATTAT 60.562 45.833 0.00 0.00 0.00 1.28
2752 2769 5.336770 CGAAGTCTCATGGGCTGCTATTATA 60.337 44.000 0.00 0.00 0.00 0.98
2753 2770 5.413309 AGTCTCATGGGCTGCTATTATAC 57.587 43.478 0.00 0.00 0.00 1.47
2754 2771 4.081972 AGTCTCATGGGCTGCTATTATACG 60.082 45.833 0.00 0.00 0.00 3.06
2755 2772 3.195610 TCTCATGGGCTGCTATTATACGG 59.804 47.826 0.00 0.00 0.00 4.02
2756 2773 2.236146 TCATGGGCTGCTATTATACGGG 59.764 50.000 0.00 0.00 0.00 5.28
2757 2774 1.724545 TGGGCTGCTATTATACGGGT 58.275 50.000 0.00 0.00 0.00 5.28
2758 2775 1.346395 TGGGCTGCTATTATACGGGTG 59.654 52.381 0.00 0.00 0.00 4.61
2759 2776 1.439679 GGCTGCTATTATACGGGTGC 58.560 55.000 0.00 0.00 0.00 5.01
2760 2777 1.270625 GGCTGCTATTATACGGGTGCA 60.271 52.381 0.00 0.00 0.00 4.57
2761 2778 2.489971 GCTGCTATTATACGGGTGCAA 58.510 47.619 0.00 0.00 0.00 4.08
2762 2779 2.223377 GCTGCTATTATACGGGTGCAAC 59.777 50.000 0.00 0.00 0.00 4.17
2763 2780 3.728845 CTGCTATTATACGGGTGCAACT 58.271 45.455 0.00 0.00 36.74 3.16
2771 2788 1.376424 CGGGTGCAACTCTCATGCT 60.376 57.895 0.00 0.00 44.14 3.79
2772 2789 1.364626 CGGGTGCAACTCTCATGCTC 61.365 60.000 0.00 0.00 44.14 4.26
2775 2792 0.447011 GTGCAACTCTCATGCTCTGC 59.553 55.000 0.00 0.00 44.14 4.26
2844 2861 6.441093 TGAATACTGCAATTCATCTTGGTC 57.559 37.500 9.30 0.00 40.17 4.02
2861 2878 0.954452 GTCAGGCCAGGTTTTGTCAG 59.046 55.000 5.01 0.00 0.00 3.51
2886 2903 2.177531 GCATCGTGTTGCAGCAGG 59.822 61.111 16.06 16.06 42.31 4.85
2887 2904 2.620112 GCATCGTGTTGCAGCAGGT 61.620 57.895 20.37 7.60 42.31 4.00
2888 2905 1.951510 CATCGTGTTGCAGCAGGTT 59.048 52.632 20.37 11.34 0.00 3.50
2889 2906 0.386352 CATCGTGTTGCAGCAGGTTG 60.386 55.000 20.37 18.24 0.00 3.77
2890 2907 0.819259 ATCGTGTTGCAGCAGGTTGT 60.819 50.000 20.37 7.66 0.00 3.32
2891 2908 1.029408 TCGTGTTGCAGCAGGTTGTT 61.029 50.000 20.37 0.00 0.00 2.83
2892 2909 0.866906 CGTGTTGCAGCAGGTTGTTG 60.867 55.000 14.25 0.00 0.00 3.33
2906 2923 3.319122 AGGTTGTTGCAAGATCCTTTCAC 59.681 43.478 18.10 2.51 0.00 3.18
2910 2927 3.569701 TGTTGCAAGATCCTTTCACCTTC 59.430 43.478 0.00 0.00 0.00 3.46
2911 2928 3.795688 TGCAAGATCCTTTCACCTTCT 57.204 42.857 0.00 0.00 0.00 2.85
2937 2954 5.596836 TTTTTCCTCATTGCTTTCACTGT 57.403 34.783 0.00 0.00 0.00 3.55
2938 2955 5.596836 TTTTCCTCATTGCTTTCACTGTT 57.403 34.783 0.00 0.00 0.00 3.16
2939 2956 5.596836 TTTCCTCATTGCTTTCACTGTTT 57.403 34.783 0.00 0.00 0.00 2.83
2940 2957 5.596836 TTCCTCATTGCTTTCACTGTTTT 57.403 34.783 0.00 0.00 0.00 2.43
2941 2958 5.596836 TCCTCATTGCTTTCACTGTTTTT 57.403 34.783 0.00 0.00 0.00 1.94
2942 2959 6.707440 TCCTCATTGCTTTCACTGTTTTTA 57.293 33.333 0.00 0.00 0.00 1.52
2943 2960 7.106439 TCCTCATTGCTTTCACTGTTTTTAA 57.894 32.000 0.00 0.00 0.00 1.52
2944 2961 7.202526 TCCTCATTGCTTTCACTGTTTTTAAG 58.797 34.615 0.00 0.00 0.00 1.85
2945 2962 7.068103 TCCTCATTGCTTTCACTGTTTTTAAGA 59.932 33.333 0.00 0.00 0.00 2.10
2946 2963 7.869429 CCTCATTGCTTTCACTGTTTTTAAGAT 59.131 33.333 0.00 0.00 0.00 2.40
2947 2964 8.801715 TCATTGCTTTCACTGTTTTTAAGATC 57.198 30.769 0.00 0.00 0.00 2.75
2948 2965 8.412456 TCATTGCTTTCACTGTTTTTAAGATCA 58.588 29.630 0.00 0.00 0.00 2.92
2949 2966 8.697067 CATTGCTTTCACTGTTTTTAAGATCAG 58.303 33.333 0.00 3.21 0.00 2.90
2950 2967 7.333528 TGCTTTCACTGTTTTTAAGATCAGT 57.666 32.000 4.34 4.34 41.02 3.41
2958 2975 9.573133 CACTGTTTTTAAGATCAGTGTCTTTTT 57.427 29.630 20.98 0.00 46.92 1.94
2983 3000 5.596836 TCCTCATTGCTTTCACTGTTTTT 57.403 34.783 0.00 0.00 0.00 1.94
2993 3010 9.515020 TTGCTTTCACTGTTTTTAAGATTAGTG 57.485 29.630 0.00 0.00 37.47 2.74
3002 3019 9.463443 CTGTTTTTAAGATTAGTGTTTTCCTGG 57.537 33.333 0.00 0.00 0.00 4.45
3011 3028 8.442374 AGATTAGTGTTTTCCTGGTAAACCTTA 58.558 33.333 21.43 13.88 35.20 2.69
3022 3039 6.265876 TCCTGGTAAACCTTAAAATGTTCCAC 59.734 38.462 0.02 0.00 36.82 4.02
3027 3044 4.535526 ACCTTAAAATGTTCCACCATGC 57.464 40.909 0.00 0.00 0.00 4.06
3031 3048 5.511202 CCTTAAAATGTTCCACCATGCTTGT 60.511 40.000 0.00 0.00 0.00 3.16
3032 3049 3.389925 AAATGTTCCACCATGCTTGTG 57.610 42.857 0.00 0.00 0.00 3.33
3033 3050 0.604578 ATGTTCCACCATGCTTGTGC 59.395 50.000 0.00 0.00 40.20 4.57
3050 3067 4.669206 TGTGCAATTTCACAATTCCTGT 57.331 36.364 8.53 0.00 43.27 4.00
3065 3082 3.202829 TCCTGTTGTAGAACGGCTTTT 57.797 42.857 6.05 0.00 37.16 2.27
3089 3107 3.745799 TGGTAGATTTCTTTGACGGCAA 58.254 40.909 0.00 0.00 0.00 4.52
3090 3108 3.751175 TGGTAGATTTCTTTGACGGCAAG 59.249 43.478 2.76 0.00 35.04 4.01
3106 3124 3.488384 CGGCAAGAACTTTTGTGCTGTTA 60.488 43.478 0.00 0.00 37.32 2.41
3109 3127 5.629435 GGCAAGAACTTTTGTGCTGTTATAC 59.371 40.000 0.00 0.00 37.32 1.47
3114 3132 7.639945 AGAACTTTTGTGCTGTTATACTTCAC 58.360 34.615 0.00 0.00 36.82 3.18
3131 3149 4.451435 ACTTCACCGCTAAAGCTTCTTTAC 59.549 41.667 0.00 0.00 39.32 2.01
3136 3154 3.423123 CCGCTAAAGCTTCTTTACGTGTG 60.423 47.826 0.00 0.00 39.32 3.82
3145 3163 7.118422 AGCTTCTTTACGTGTGTTTCTTATC 57.882 36.000 0.00 0.00 0.00 1.75
3146 3164 6.147328 AGCTTCTTTACGTGTGTTTCTTATCC 59.853 38.462 0.00 0.00 0.00 2.59
3147 3165 6.073440 GCTTCTTTACGTGTGTTTCTTATCCA 60.073 38.462 0.00 0.00 0.00 3.41
3148 3166 7.360946 GCTTCTTTACGTGTGTTTCTTATCCAT 60.361 37.037 0.00 0.00 0.00 3.41
3150 3168 9.491675 TTCTTTACGTGTGTTTCTTATCCATAA 57.508 29.630 0.00 0.00 0.00 1.90
3151 3169 9.661563 TCTTTACGTGTGTTTCTTATCCATAAT 57.338 29.630 0.00 0.00 0.00 1.28
3152 3170 9.916397 CTTTACGTGTGTTTCTTATCCATAATC 57.084 33.333 0.00 0.00 0.00 1.75
3154 3172 9.607988 TTACGTGTGTTTCTTATCCATAATCAT 57.392 29.630 0.00 0.00 0.00 2.45
3156 3174 9.607988 ACGTGTGTTTCTTATCCATAATCATAA 57.392 29.630 0.00 0.00 0.00 1.90
3164 3182 9.866655 TTCTTATCCATAATCATAAAGCTTGGT 57.133 29.630 0.00 0.00 0.00 3.67
3171 3189 3.658757 TCATAAAGCTTGGTTGTTGGC 57.341 42.857 0.00 0.00 0.00 4.52
3173 3191 2.080654 TAAAGCTTGGTTGTTGGCCT 57.919 45.000 3.32 0.00 0.00 5.19
3175 3193 0.687427 AAGCTTGGTTGTTGGCCTGT 60.687 50.000 3.32 0.00 0.00 4.00
3182 3200 0.534873 GTTGTTGGCCTGTTGGTTGT 59.465 50.000 3.32 0.00 35.27 3.32
3194 3212 4.232221 CTGTTGGTTGTTCAGCATCAATC 58.768 43.478 0.00 0.00 33.25 2.67
3263 3281 3.080121 CGCCCTGCTCCTCTTCCT 61.080 66.667 0.00 0.00 0.00 3.36
3268 3286 0.536260 CCTGCTCCTCTTCCTCACAG 59.464 60.000 0.00 0.00 0.00 3.66
3269 3287 1.265236 CTGCTCCTCTTCCTCACAGT 58.735 55.000 0.00 0.00 0.00 3.55
3270 3288 1.622811 CTGCTCCTCTTCCTCACAGTT 59.377 52.381 0.00 0.00 0.00 3.16
3271 3289 1.345741 TGCTCCTCTTCCTCACAGTTG 59.654 52.381 0.00 0.00 0.00 3.16
3272 3290 1.338579 GCTCCTCTTCCTCACAGTTGG 60.339 57.143 0.00 0.00 0.00 3.77
3273 3291 2.251818 CTCCTCTTCCTCACAGTTGGA 58.748 52.381 0.00 0.00 0.00 3.53
3274 3292 2.836981 CTCCTCTTCCTCACAGTTGGAT 59.163 50.000 0.00 0.00 31.76 3.41
3275 3293 2.834549 TCCTCTTCCTCACAGTTGGATC 59.165 50.000 0.00 0.00 31.76 3.36
3276 3294 2.836981 CCTCTTCCTCACAGTTGGATCT 59.163 50.000 0.00 0.00 31.76 2.75
3277 3295 3.262915 CCTCTTCCTCACAGTTGGATCTT 59.737 47.826 0.00 0.00 31.76 2.40
3278 3296 4.263243 CCTCTTCCTCACAGTTGGATCTTT 60.263 45.833 0.00 0.00 31.76 2.52
3279 3297 5.310409 TCTTCCTCACAGTTGGATCTTTT 57.690 39.130 0.00 0.00 31.76 2.27
3280 3298 5.308825 TCTTCCTCACAGTTGGATCTTTTC 58.691 41.667 0.00 0.00 31.76 2.29
3281 3299 4.705110 TCCTCACAGTTGGATCTTTTCA 57.295 40.909 0.00 0.00 0.00 2.69
3282 3300 4.645535 TCCTCACAGTTGGATCTTTTCAG 58.354 43.478 0.00 0.00 0.00 3.02
3283 3301 3.190118 CCTCACAGTTGGATCTTTTCAGC 59.810 47.826 0.00 0.00 0.00 4.26
3284 3302 3.149196 TCACAGTTGGATCTTTTCAGCC 58.851 45.455 0.00 0.00 0.00 4.85
3285 3303 2.886523 CACAGTTGGATCTTTTCAGCCA 59.113 45.455 0.00 0.00 0.00 4.75
3286 3304 3.508793 CACAGTTGGATCTTTTCAGCCAT 59.491 43.478 0.00 0.00 0.00 4.40
3287 3305 3.760684 ACAGTTGGATCTTTTCAGCCATC 59.239 43.478 0.00 0.00 0.00 3.51
3288 3306 3.129988 CAGTTGGATCTTTTCAGCCATCC 59.870 47.826 0.00 0.00 36.15 3.51
3289 3307 3.091545 GTTGGATCTTTTCAGCCATCCA 58.908 45.455 0.00 0.00 42.55 3.41
3290 3308 2.726821 TGGATCTTTTCAGCCATCCAC 58.273 47.619 0.00 0.00 39.95 4.02
3291 3309 2.027385 GGATCTTTTCAGCCATCCACC 58.973 52.381 0.00 0.00 35.72 4.61
3292 3310 1.672881 GATCTTTTCAGCCATCCACCG 59.327 52.381 0.00 0.00 0.00 4.94
3293 3311 0.960364 TCTTTTCAGCCATCCACCGC 60.960 55.000 0.00 0.00 0.00 5.68
3294 3312 2.257286 CTTTTCAGCCATCCACCGCG 62.257 60.000 0.00 0.00 0.00 6.46
3295 3313 4.776322 TTCAGCCATCCACCGCGG 62.776 66.667 26.86 26.86 0.00 6.46
3300 3318 3.814268 CCATCCACCGCGGCAAAG 61.814 66.667 28.58 13.01 33.14 2.77
3301 3319 3.814268 CATCCACCGCGGCAAAGG 61.814 66.667 28.58 21.93 33.14 3.11
3305 3323 3.601685 CACCGCGGCAAAGGGTTT 61.602 61.111 28.58 0.00 29.82 3.27
3306 3324 2.835895 ACCGCGGCAAAGGGTTTT 60.836 55.556 28.58 0.00 0.00 2.43
3307 3325 1.528776 ACCGCGGCAAAGGGTTTTA 60.529 52.632 28.58 0.00 0.00 1.52
3308 3326 1.081041 CCGCGGCAAAGGGTTTTAC 60.081 57.895 14.67 0.00 0.00 2.01
3309 3327 1.520600 CCGCGGCAAAGGGTTTTACT 61.521 55.000 14.67 0.00 0.00 2.24
3310 3328 0.386731 CGCGGCAAAGGGTTTTACTG 60.387 55.000 0.00 0.00 0.00 2.74
3311 3329 0.038618 GCGGCAAAGGGTTTTACTGG 60.039 55.000 0.00 0.00 0.00 4.00
3312 3330 1.611519 CGGCAAAGGGTTTTACTGGA 58.388 50.000 0.00 0.00 0.00 3.86
3313 3331 1.539827 CGGCAAAGGGTTTTACTGGAG 59.460 52.381 0.00 0.00 0.00 3.86
3314 3332 2.594131 GGCAAAGGGTTTTACTGGAGT 58.406 47.619 0.00 0.00 0.00 3.85
3315 3333 3.758425 GGCAAAGGGTTTTACTGGAGTA 58.242 45.455 0.00 0.00 0.00 2.59
3316 3334 3.504906 GGCAAAGGGTTTTACTGGAGTAC 59.495 47.826 0.00 0.00 0.00 2.73
3317 3335 4.395625 GCAAAGGGTTTTACTGGAGTACT 58.604 43.478 0.00 0.00 0.00 2.73
3318 3336 4.825634 GCAAAGGGTTTTACTGGAGTACTT 59.174 41.667 0.00 0.00 0.00 2.24
3319 3337 5.999600 GCAAAGGGTTTTACTGGAGTACTTA 59.000 40.000 0.00 0.00 0.00 2.24
3320 3338 6.487668 GCAAAGGGTTTTACTGGAGTACTTAA 59.512 38.462 0.00 0.00 0.00 1.85
3321 3339 7.176165 GCAAAGGGTTTTACTGGAGTACTTAAT 59.824 37.037 0.00 0.00 0.00 1.40
3322 3340 9.074576 CAAAGGGTTTTACTGGAGTACTTAATT 57.925 33.333 0.00 0.00 0.00 1.40
3350 3368 2.218953 TGATCTAATCAACCGTCGGC 57.781 50.000 12.28 0.00 36.11 5.54
3351 3369 1.478916 TGATCTAATCAACCGTCGGCA 59.521 47.619 12.28 0.00 36.11 5.69
3352 3370 2.128035 GATCTAATCAACCGTCGGCAG 58.872 52.381 12.28 3.96 0.00 4.85
3353 3371 0.892755 TCTAATCAACCGTCGGCAGT 59.107 50.000 12.28 0.00 0.00 4.40
3354 3372 1.274167 TCTAATCAACCGTCGGCAGTT 59.726 47.619 12.28 4.17 0.00 3.16
3355 3373 2.073816 CTAATCAACCGTCGGCAGTTT 58.926 47.619 12.28 8.01 0.00 2.66
3356 3374 0.591170 AATCAACCGTCGGCAGTTTG 59.409 50.000 12.28 8.61 0.00 2.93
3357 3375 1.234615 ATCAACCGTCGGCAGTTTGG 61.235 55.000 12.28 0.00 0.00 3.28
3358 3376 2.184167 CAACCGTCGGCAGTTTGGT 61.184 57.895 12.28 0.00 33.45 3.67
3359 3377 1.452470 AACCGTCGGCAGTTTGGTT 60.452 52.632 12.28 4.86 38.07 3.67
3360 3378 1.033202 AACCGTCGGCAGTTTGGTTT 61.033 50.000 12.28 0.00 39.83 3.27
3361 3379 1.033202 ACCGTCGGCAGTTTGGTTTT 61.033 50.000 12.28 0.00 0.00 2.43
3362 3380 0.945813 CCGTCGGCAGTTTGGTTTTA 59.054 50.000 0.00 0.00 0.00 1.52
3363 3381 1.334329 CCGTCGGCAGTTTGGTTTTAC 60.334 52.381 0.00 0.00 0.00 2.01
3364 3382 1.658094 CGTCGGCAGTTTGGTTTTACG 60.658 52.381 0.00 0.00 0.00 3.18
3365 3383 0.945813 TCGGCAGTTTGGTTTTACGG 59.054 50.000 0.00 0.00 0.00 4.02
3366 3384 0.662077 CGGCAGTTTGGTTTTACGGC 60.662 55.000 0.00 0.00 35.20 5.68
3367 3385 0.319211 GGCAGTTTGGTTTTACGGCC 60.319 55.000 0.00 0.00 45.67 6.13
3368 3386 0.319211 GCAGTTTGGTTTTACGGCCC 60.319 55.000 0.00 0.00 30.69 5.80
3369 3387 1.324383 CAGTTTGGTTTTACGGCCCT 58.676 50.000 0.00 0.00 0.00 5.19
3370 3388 2.506444 CAGTTTGGTTTTACGGCCCTA 58.494 47.619 0.00 0.00 0.00 3.53
3371 3389 2.486592 CAGTTTGGTTTTACGGCCCTAG 59.513 50.000 0.00 0.00 0.00 3.02
3372 3390 2.107031 AGTTTGGTTTTACGGCCCTAGT 59.893 45.455 0.00 0.00 0.00 2.57
3373 3391 2.477845 TTGGTTTTACGGCCCTAGTC 57.522 50.000 0.00 0.00 0.00 2.59
3374 3392 1.350071 TGGTTTTACGGCCCTAGTCA 58.650 50.000 0.00 0.00 0.00 3.41
3375 3393 1.002315 TGGTTTTACGGCCCTAGTCAC 59.998 52.381 0.00 0.00 0.00 3.67
3376 3394 1.353076 GTTTTACGGCCCTAGTCACG 58.647 55.000 0.00 0.00 0.00 4.35
3377 3395 0.390209 TTTTACGGCCCTAGTCACGC 60.390 55.000 0.00 0.00 0.00 5.34
3378 3396 2.229690 TTTACGGCCCTAGTCACGCC 62.230 60.000 0.00 0.00 39.41 5.68
3379 3397 3.650298 TACGGCCCTAGTCACGCCT 62.650 63.158 0.00 0.00 40.70 5.52
3380 3398 4.514577 CGGCCCTAGTCACGCCTG 62.515 72.222 0.00 0.00 40.70 4.85
3381 3399 3.391382 GGCCCTAGTCACGCCTGT 61.391 66.667 0.00 0.00 39.70 4.00
3382 3400 2.663196 GCCCTAGTCACGCCTGTT 59.337 61.111 0.00 0.00 0.00 3.16
3383 3401 1.003718 GCCCTAGTCACGCCTGTTT 60.004 57.895 0.00 0.00 0.00 2.83
3384 3402 0.605589 GCCCTAGTCACGCCTGTTTT 60.606 55.000 0.00 0.00 0.00 2.43
3385 3403 1.892209 CCCTAGTCACGCCTGTTTTT 58.108 50.000 0.00 0.00 0.00 1.94
3447 3465 6.969366 CAAATACATTGGGATGCGATTTAGA 58.031 36.000 0.00 0.00 36.72 2.10
3448 3466 7.596494 CAAATACATTGGGATGCGATTTAGAT 58.404 34.615 0.00 0.00 36.72 1.98
3449 3467 8.729756 CAAATACATTGGGATGCGATTTAGATA 58.270 33.333 0.00 0.00 36.72 1.98
3450 3468 7.849804 ATACATTGGGATGCGATTTAGATAC 57.150 36.000 0.00 0.00 36.72 2.24
3451 3469 4.690748 ACATTGGGATGCGATTTAGATACG 59.309 41.667 0.00 0.00 36.72 3.06
3452 3470 3.313012 TGGGATGCGATTTAGATACGG 57.687 47.619 0.00 0.00 0.00 4.02
3453 3471 2.028476 TGGGATGCGATTTAGATACGGG 60.028 50.000 0.00 0.00 0.00 5.28
3454 3472 2.618053 GGATGCGATTTAGATACGGGG 58.382 52.381 0.00 0.00 0.00 5.73
3455 3473 2.028385 GGATGCGATTTAGATACGGGGT 60.028 50.000 0.00 0.00 0.00 4.95
3456 3474 3.194116 GGATGCGATTTAGATACGGGGTA 59.806 47.826 0.00 0.00 0.00 3.69
3457 3475 4.322198 GGATGCGATTTAGATACGGGGTAA 60.322 45.833 0.00 0.00 0.00 2.85
3458 3476 3.981211 TGCGATTTAGATACGGGGTAAC 58.019 45.455 0.00 0.00 0.00 2.50
3459 3477 3.638160 TGCGATTTAGATACGGGGTAACT 59.362 43.478 0.00 0.00 0.00 2.24
3460 3478 4.233005 GCGATTTAGATACGGGGTAACTC 58.767 47.826 0.00 0.00 0.00 3.01
3461 3479 4.802999 CGATTTAGATACGGGGTAACTCC 58.197 47.826 0.00 0.00 0.00 3.85
3462 3480 4.279169 CGATTTAGATACGGGGTAACTCCA 59.721 45.833 0.00 0.00 38.11 3.86
3463 3481 5.564259 CGATTTAGATACGGGGTAACTCCAG 60.564 48.000 0.00 0.00 38.11 3.86
3464 3482 2.842645 AGATACGGGGTAACTCCAGT 57.157 50.000 0.00 0.00 38.11 4.00
3465 3483 3.111741 AGATACGGGGTAACTCCAGTT 57.888 47.619 0.00 0.00 41.73 3.16
3466 3484 3.447950 AGATACGGGGTAACTCCAGTTT 58.552 45.455 0.00 0.00 39.31 2.66
3467 3485 3.842436 AGATACGGGGTAACTCCAGTTTT 59.158 43.478 0.00 0.00 39.31 2.43
3468 3486 4.287845 AGATACGGGGTAACTCCAGTTTTT 59.712 41.667 0.00 0.00 39.31 1.94
3526 3544 8.856490 TTTTAGACAAATGAGCAAAAGAAGTC 57.144 30.769 0.00 0.00 0.00 3.01
3527 3545 7.566760 TTAGACAAATGAGCAAAAGAAGTCA 57.433 32.000 0.00 0.00 0.00 3.41
3528 3546 5.825507 AGACAAATGAGCAAAAGAAGTCAC 58.174 37.500 0.00 0.00 0.00 3.67
3529 3547 5.591877 AGACAAATGAGCAAAAGAAGTCACT 59.408 36.000 0.00 0.00 0.00 3.41
3530 3548 5.825507 ACAAATGAGCAAAAGAAGTCACTC 58.174 37.500 0.00 0.00 0.00 3.51
3531 3549 5.218139 CAAATGAGCAAAAGAAGTCACTCC 58.782 41.667 0.00 0.00 0.00 3.85
3532 3550 3.558931 TGAGCAAAAGAAGTCACTCCA 57.441 42.857 0.00 0.00 0.00 3.86
3533 3551 3.470709 TGAGCAAAAGAAGTCACTCCAG 58.529 45.455 0.00 0.00 0.00 3.86
3534 3552 3.118261 TGAGCAAAAGAAGTCACTCCAGT 60.118 43.478 0.00 0.00 0.00 4.00
3535 3553 3.879892 GAGCAAAAGAAGTCACTCCAGTT 59.120 43.478 0.00 0.00 0.00 3.16
3536 3554 3.629398 AGCAAAAGAAGTCACTCCAGTTG 59.371 43.478 0.00 0.00 0.00 3.16
3537 3555 3.243201 GCAAAAGAAGTCACTCCAGTTGG 60.243 47.826 0.00 0.00 0.00 3.77
3538 3556 4.199310 CAAAAGAAGTCACTCCAGTTGGA 58.801 43.478 0.18 0.18 43.08 3.53
3539 3557 4.713792 AAAGAAGTCACTCCAGTTGGAT 57.286 40.909 0.48 0.00 44.46 3.41
3540 3558 3.692257 AGAAGTCACTCCAGTTGGATG 57.308 47.619 0.48 3.30 44.46 3.51
3541 3559 2.304180 AGAAGTCACTCCAGTTGGATGG 59.696 50.000 0.48 0.00 44.46 3.51
3547 3565 1.224315 TCCAGTTGGATGGATGGCG 59.776 57.895 0.00 0.00 44.56 5.69
3548 3566 1.825191 CCAGTTGGATGGATGGCGG 60.825 63.158 0.00 0.00 43.57 6.13
3549 3567 2.124151 AGTTGGATGGATGGCGGC 60.124 61.111 0.00 0.00 0.00 6.53
3550 3568 3.585990 GTTGGATGGATGGCGGCG 61.586 66.667 0.51 0.51 0.00 6.46
3592 3610 4.740822 CCCGTGGGCCCAGGAAAG 62.741 72.222 39.87 25.17 34.13 2.62
3593 3611 4.740822 CCGTGGGCCCAGGAAAGG 62.741 72.222 39.87 26.07 34.13 3.11
3594 3612 3.646715 CGTGGGCCCAGGAAAGGA 61.647 66.667 36.29 3.97 34.13 3.36
3595 3613 2.356667 GTGGGCCCAGGAAAGGAG 59.643 66.667 29.55 0.00 0.00 3.69
3596 3614 2.941025 TGGGCCCAGGAAAGGAGG 60.941 66.667 24.45 0.00 0.00 4.30
3597 3615 4.448976 GGGCCCAGGAAAGGAGGC 62.449 72.222 19.95 0.00 44.99 4.70
3598 3616 4.803908 GGCCCAGGAAAGGAGGCG 62.804 72.222 0.00 0.00 46.75 5.52
3599 3617 3.717294 GCCCAGGAAAGGAGGCGA 61.717 66.667 0.00 0.00 35.30 5.54
3600 3618 3.049080 GCCCAGGAAAGGAGGCGAT 62.049 63.158 0.00 0.00 35.30 4.58
3601 3619 1.147153 CCCAGGAAAGGAGGCGATC 59.853 63.158 0.00 0.00 0.00 3.69
3602 3620 1.227380 CCAGGAAAGGAGGCGATCG 60.227 63.158 11.69 11.69 0.00 3.69
3603 3621 1.884926 CAGGAAAGGAGGCGATCGC 60.885 63.158 31.52 31.52 41.06 4.58
3604 3622 2.060980 AGGAAAGGAGGCGATCGCT 61.061 57.895 36.25 23.50 41.60 4.93
3605 3623 1.884926 GGAAAGGAGGCGATCGCTG 60.885 63.158 36.25 0.25 41.60 5.18
3606 3624 2.512515 AAAGGAGGCGATCGCTGC 60.513 61.111 36.25 27.14 41.60 5.25
3607 3625 2.914777 GAAAGGAGGCGATCGCTGCT 62.915 60.000 36.25 27.90 41.60 4.24
3608 3626 2.527951 AAAGGAGGCGATCGCTGCTT 62.528 55.000 36.25 31.02 41.60 3.91
3609 3627 2.914777 AAGGAGGCGATCGCTGCTTC 62.915 60.000 36.25 25.05 41.60 3.86
3610 3628 3.326210 GAGGCGATCGCTGCTTCG 61.326 66.667 36.25 14.85 41.60 3.79
3611 3629 4.880537 AGGCGATCGCTGCTTCGG 62.881 66.667 36.25 0.00 41.60 4.30
3613 3631 2.278596 GCGATCGCTGCTTCGGTA 60.279 61.111 31.94 0.00 38.26 4.02
3614 3632 2.296480 GCGATCGCTGCTTCGGTAG 61.296 63.158 31.94 0.00 38.26 3.18
3615 3633 1.064296 CGATCGCTGCTTCGGTAGT 59.936 57.895 0.26 0.00 0.00 2.73
3616 3634 0.525668 CGATCGCTGCTTCGGTAGTT 60.526 55.000 0.26 0.00 0.00 2.24
3617 3635 0.924090 GATCGCTGCTTCGGTAGTTG 59.076 55.000 0.00 0.00 0.00 3.16
3618 3636 1.084370 ATCGCTGCTTCGGTAGTTGC 61.084 55.000 0.00 0.00 0.00 4.17
3619 3637 1.738099 CGCTGCTTCGGTAGTTGCT 60.738 57.895 0.00 0.00 0.00 3.91
3620 3638 1.687494 CGCTGCTTCGGTAGTTGCTC 61.687 60.000 0.00 0.00 0.00 4.26
3621 3639 1.687494 GCTGCTTCGGTAGTTGCTCG 61.687 60.000 0.00 0.00 0.00 5.03
3622 3640 0.388649 CTGCTTCGGTAGTTGCTCGT 60.389 55.000 0.00 0.00 0.00 4.18
3623 3641 0.032952 TGCTTCGGTAGTTGCTCGTT 59.967 50.000 0.00 0.00 0.00 3.85
3624 3642 0.714439 GCTTCGGTAGTTGCTCGTTC 59.286 55.000 0.00 0.00 0.00 3.95
3625 3643 1.347320 CTTCGGTAGTTGCTCGTTCC 58.653 55.000 0.00 0.00 0.00 3.62
3626 3644 0.037975 TTCGGTAGTTGCTCGTTCCC 60.038 55.000 0.00 0.00 0.00 3.97
3627 3645 1.804326 CGGTAGTTGCTCGTTCCCG 60.804 63.158 0.00 0.00 0.00 5.14
3628 3646 1.291272 GGTAGTTGCTCGTTCCCGT 59.709 57.895 0.00 0.00 35.01 5.28
3629 3647 0.735287 GGTAGTTGCTCGTTCCCGTC 60.735 60.000 0.00 0.00 35.01 4.79
3630 3648 0.243095 GTAGTTGCTCGTTCCCGTCT 59.757 55.000 0.00 0.00 35.01 4.18
3631 3649 0.242825 TAGTTGCTCGTTCCCGTCTG 59.757 55.000 0.00 0.00 35.01 3.51
3632 3650 2.027625 GTTGCTCGTTCCCGTCTGG 61.028 63.158 0.00 0.00 35.01 3.86
3633 3651 2.204461 TTGCTCGTTCCCGTCTGGA 61.204 57.895 0.00 0.00 43.18 3.86
3634 3652 1.541310 TTGCTCGTTCCCGTCTGGAT 61.541 55.000 0.00 0.00 44.66 3.41
3635 3653 1.227002 GCTCGTTCCCGTCTGGATC 60.227 63.158 0.00 0.00 44.66 3.36
3637 3655 2.582498 CGTTCCCGTCTGGATCGC 60.582 66.667 1.45 0.00 46.22 4.58
3638 3656 2.893398 GTTCCCGTCTGGATCGCT 59.107 61.111 0.00 0.00 44.66 4.93
3639 3657 1.519455 GTTCCCGTCTGGATCGCTG 60.519 63.158 0.00 0.00 44.66 5.18
3640 3658 2.721167 TTCCCGTCTGGATCGCTGG 61.721 63.158 0.00 0.00 44.66 4.85
3641 3659 3.461773 CCCGTCTGGATCGCTGGT 61.462 66.667 0.00 0.00 37.49 4.00
3642 3660 2.579201 CCGTCTGGATCGCTGGTT 59.421 61.111 0.00 0.00 37.49 3.67
3643 3661 1.519455 CCGTCTGGATCGCTGGTTC 60.519 63.158 0.00 0.00 37.49 3.62
3644 3662 1.215382 CGTCTGGATCGCTGGTTCA 59.785 57.895 0.00 0.00 0.00 3.18
3645 3663 1.078759 CGTCTGGATCGCTGGTTCAC 61.079 60.000 0.00 0.00 0.00 3.18
3646 3664 0.741221 GTCTGGATCGCTGGTTCACC 60.741 60.000 0.00 0.00 0.00 4.02
3647 3665 1.811266 CTGGATCGCTGGTTCACCG 60.811 63.158 0.00 0.00 39.43 4.94
3648 3666 2.264794 GGATCGCTGGTTCACCGT 59.735 61.111 0.00 0.00 39.43 4.83
3649 3667 1.810030 GGATCGCTGGTTCACCGTC 60.810 63.158 0.00 0.00 39.43 4.79
3650 3668 1.215647 GATCGCTGGTTCACCGTCT 59.784 57.895 0.00 0.00 39.43 4.18
3651 3669 1.078759 GATCGCTGGTTCACCGTCTG 61.079 60.000 0.00 0.00 39.43 3.51
3652 3670 2.507110 ATCGCTGGTTCACCGTCTGG 62.507 60.000 0.00 0.00 39.43 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.297701 GCCCCGAGCAAAGATTTCATA 58.702 47.619 0.00 0.00 42.97 2.15
1 2 1.106285 GCCCCGAGCAAAGATTTCAT 58.894 50.000 0.00 0.00 42.97 2.57
2 3 2.566824 GCCCCGAGCAAAGATTTCA 58.433 52.632 0.00 0.00 42.97 2.69
13 14 3.798954 GAGCAATCCGAGCCCCGAG 62.799 68.421 0.00 0.00 41.76 4.63
14 15 3.849951 GAGCAATCCGAGCCCCGA 61.850 66.667 0.00 0.00 41.76 5.14
85 93 4.401022 ACATGACCACACTGATTTGACAT 58.599 39.130 0.00 0.00 0.00 3.06
91 99 4.090761 ACTGAACATGACCACACTGATT 57.909 40.909 0.00 0.00 0.00 2.57
115 123 2.034053 GTCAACAATCCAGGCAAAACGA 59.966 45.455 0.00 0.00 0.00 3.85
116 124 2.393764 GTCAACAATCCAGGCAAAACG 58.606 47.619 0.00 0.00 0.00 3.60
131 139 4.959631 TTACGAGACATTCAACGTCAAC 57.040 40.909 0.00 0.00 39.59 3.18
136 144 8.610855 TTCTAGTTATTACGAGACATTCAACG 57.389 34.615 0.00 0.00 36.01 4.10
141 149 9.250624 GCAGAATTCTAGTTATTACGAGACATT 57.749 33.333 7.86 0.00 36.01 2.71
142 150 7.868415 GGCAGAATTCTAGTTATTACGAGACAT 59.132 37.037 7.86 0.00 36.01 3.06
174 182 6.323739 AGCAGACCCAGTTCTTTTTCATTTTA 59.676 34.615 0.00 0.00 0.00 1.52
178 186 3.837355 AGCAGACCCAGTTCTTTTTCAT 58.163 40.909 0.00 0.00 0.00 2.57
184 192 0.538287 GCCAAGCAGACCCAGTTCTT 60.538 55.000 0.00 0.00 0.00 2.52
191 199 1.115326 AAACCAAGCCAAGCAGACCC 61.115 55.000 0.00 0.00 0.00 4.46
193 201 1.268079 GAGAAACCAAGCCAAGCAGAC 59.732 52.381 0.00 0.00 0.00 3.51
214 222 7.230027 GGGTCAGAAAATAATCCTCATCATCT 58.770 38.462 0.00 0.00 0.00 2.90
218 226 4.757149 CCGGGTCAGAAAATAATCCTCATC 59.243 45.833 0.00 0.00 0.00 2.92
263 271 9.695526 TCAATAAATGACAACAGGATTGAAAAG 57.304 29.630 0.00 0.00 33.52 2.27
282 290 5.735922 GCAAACAGCTTGGACAGTCAATAAA 60.736 40.000 2.17 0.00 41.15 1.40
316 324 5.465390 TGACAACAGGATTGAAAAGTAGTCG 59.535 40.000 0.00 0.00 0.00 4.18
321 329 6.877236 ACAAATGACAACAGGATTGAAAAGT 58.123 32.000 0.00 0.00 0.00 2.66
349 357 8.774586 AGCAGACAGTAAACATTTTAAGTACAG 58.225 33.333 0.00 0.00 0.00 2.74
355 363 8.389779 TCATCAGCAGACAGTAAACATTTTAA 57.610 30.769 0.00 0.00 0.00 1.52
356 364 7.119699 CCTCATCAGCAGACAGTAAACATTTTA 59.880 37.037 0.00 0.00 0.00 1.52
358 366 5.413833 CCTCATCAGCAGACAGTAAACATTT 59.586 40.000 0.00 0.00 0.00 2.32
359 367 4.940046 CCTCATCAGCAGACAGTAAACATT 59.060 41.667 0.00 0.00 0.00 2.71
360 368 4.223700 TCCTCATCAGCAGACAGTAAACAT 59.776 41.667 0.00 0.00 0.00 2.71
361 369 3.578282 TCCTCATCAGCAGACAGTAAACA 59.422 43.478 0.00 0.00 0.00 2.83
362 370 4.193826 TCCTCATCAGCAGACAGTAAAC 57.806 45.455 0.00 0.00 0.00 2.01
363 371 5.181009 CAATCCTCATCAGCAGACAGTAAA 58.819 41.667 0.00 0.00 0.00 2.01
364 372 4.223700 ACAATCCTCATCAGCAGACAGTAA 59.776 41.667 0.00 0.00 0.00 2.24
365 373 3.771479 ACAATCCTCATCAGCAGACAGTA 59.229 43.478 0.00 0.00 0.00 2.74
366 374 2.570752 ACAATCCTCATCAGCAGACAGT 59.429 45.455 0.00 0.00 0.00 3.55
367 375 3.263489 ACAATCCTCATCAGCAGACAG 57.737 47.619 0.00 0.00 0.00 3.51
368 376 4.824479 TTACAATCCTCATCAGCAGACA 57.176 40.909 0.00 0.00 0.00 3.41
369 377 5.921004 GATTACAATCCTCATCAGCAGAC 57.079 43.478 0.00 0.00 0.00 3.51
382 390 9.087424 GAAATTTAAGCAACCAGGATTACAATC 57.913 33.333 0.00 0.00 34.66 2.67
383 391 8.815912 AGAAATTTAAGCAACCAGGATTACAAT 58.184 29.630 0.00 0.00 0.00 2.71
384 392 8.087750 CAGAAATTTAAGCAACCAGGATTACAA 58.912 33.333 0.00 0.00 0.00 2.41
385 393 7.450014 TCAGAAATTTAAGCAACCAGGATTACA 59.550 33.333 0.00 0.00 0.00 2.41
386 394 7.755373 GTCAGAAATTTAAGCAACCAGGATTAC 59.245 37.037 0.00 0.00 0.00 1.89
387 395 7.669722 AGTCAGAAATTTAAGCAACCAGGATTA 59.330 33.333 0.00 0.00 0.00 1.75
388 396 6.494835 AGTCAGAAATTTAAGCAACCAGGATT 59.505 34.615 0.00 0.00 0.00 3.01
389 397 6.012745 AGTCAGAAATTTAAGCAACCAGGAT 58.987 36.000 0.00 0.00 0.00 3.24
390 398 5.241506 CAGTCAGAAATTTAAGCAACCAGGA 59.758 40.000 0.00 0.00 0.00 3.86
391 399 5.464168 CAGTCAGAAATTTAAGCAACCAGG 58.536 41.667 0.00 0.00 0.00 4.45
395 403 4.021981 AGCCCAGTCAGAAATTTAAGCAAC 60.022 41.667 0.00 0.00 0.00 4.17
404 412 5.082425 AGATTGAAAAGCCCAGTCAGAAAT 58.918 37.500 0.00 0.00 27.83 2.17
432 440 6.299141 ACAGTTTGGACAGTCTACAAATGAT 58.701 36.000 12.62 1.69 36.60 2.45
441 449 3.004752 AGCAAACAGTTTGGACAGTCT 57.995 42.857 24.41 11.01 40.94 3.24
483 491 2.158623 AGCAAACAGACAACAGGATGGA 60.159 45.455 0.00 0.00 43.62 3.41
518 526 3.436704 ACGACAACAGGATTGTAATGCAG 59.563 43.478 0.00 0.00 36.23 4.41
521 529 5.294306 AGCATACGACAACAGGATTGTAATG 59.706 40.000 0.00 0.00 36.23 1.90
539 547 9.929180 TCAACTACAAGATAATATCCAGCATAC 57.071 33.333 0.00 0.00 0.00 2.39
561 569 7.370383 AGTATCAACAACATGAAACCATCAAC 58.630 34.615 0.00 0.00 42.54 3.18
740 748 6.152661 CACCCTTTTTCAGCATACTTATCCAA 59.847 38.462 0.00 0.00 0.00 3.53
821 829 7.116662 ACGTTAGAAGTCGCATTTAAACATACA 59.883 33.333 0.00 0.00 0.00 2.29
822 830 7.421613 CACGTTAGAAGTCGCATTTAAACATAC 59.578 37.037 0.00 0.00 0.00 2.39
823 831 7.116662 ACACGTTAGAAGTCGCATTTAAACATA 59.883 33.333 0.00 0.00 0.00 2.29
824 832 6.073440 ACACGTTAGAAGTCGCATTTAAACAT 60.073 34.615 0.00 0.00 0.00 2.71
831 839 3.386486 TCAACACGTTAGAAGTCGCATT 58.614 40.909 0.00 0.00 0.00 3.56
927 935 2.094286 CCTCTGAACGATGCTTCTCACT 60.094 50.000 0.00 0.00 0.00 3.41
940 949 3.917300 TCCTCCTTATCTCCCTCTGAAC 58.083 50.000 0.00 0.00 0.00 3.18
944 953 2.180973 TGCATCCTCCTTATCTCCCTCT 59.819 50.000 0.00 0.00 0.00 3.69
946 955 2.180973 TCTGCATCCTCCTTATCTCCCT 59.819 50.000 0.00 0.00 0.00 4.20
958 967 2.373707 GCACCTCCCTCTGCATCCT 61.374 63.158 0.00 0.00 33.31 3.24
991 1000 6.095860 TGAATGATGCTTCTCATTTACCTTGG 59.904 38.462 9.90 0.00 44.00 3.61
1127 1136 8.729756 CCACAACATCAGACAACAGATAATTAA 58.270 33.333 0.00 0.00 0.00 1.40
1301 1312 2.606795 GCACAAGCAAAATTACTCGGCA 60.607 45.455 0.00 0.00 41.58 5.69
1304 1315 3.236816 CAGGCACAAGCAAAATTACTCG 58.763 45.455 0.00 0.00 44.61 4.18
1348 1359 5.424121 AATGAACAGCAGACAGTAAACAC 57.576 39.130 0.00 0.00 0.00 3.32
1371 1382 5.924475 AGTTATCAAGAAAAGACACACCG 57.076 39.130 0.00 0.00 0.00 4.94
1376 1387 7.600375 CAGCTCAGTAGTTATCAAGAAAAGACA 59.400 37.037 0.00 0.00 0.00 3.41
1488 1499 5.767277 AATCCCAAAGATGCTTTTCCAAT 57.233 34.783 0.00 0.00 34.56 3.16
1891 1904 3.197983 CGGGAATAGACAGAAGTCCCTTT 59.802 47.826 6.99 0.00 46.15 3.11
1950 1963 2.540515 CGTTCATACACAGCCACCTAG 58.459 52.381 0.00 0.00 0.00 3.02
1976 1989 5.680619 TGATTATCTACACGGCAGGAAATT 58.319 37.500 0.00 0.00 0.00 1.82
2043 2056 4.634012 ACTTCCAGTTATACAAGCACCA 57.366 40.909 0.00 0.00 0.00 4.17
2104 2117 2.352503 ATGCTTTTCGTGCCAATCAC 57.647 45.000 0.00 0.00 42.23 3.06
2136 2149 3.186409 ACTTTGTGATGACCGAAACATCG 59.814 43.478 0.00 0.00 44.64 3.84
2208 2221 4.347360 ACCACAGGTGTACTTAGGAAAC 57.653 45.455 0.00 0.00 32.98 2.78
2236 2249 2.434336 CACCCACATCTCCTTCCGATAA 59.566 50.000 0.00 0.00 0.00 1.75
2250 2263 2.136298 TTGTGAAAGAAGCACCCACA 57.864 45.000 0.00 0.00 35.43 4.17
2276 2289 4.340666 TGCAGAAAAGCCACAAATAACTGA 59.659 37.500 0.00 0.00 0.00 3.41
2284 2297 1.824230 AGTTGTGCAGAAAAGCCACAA 59.176 42.857 0.00 1.70 35.08 3.33
2314 2327 8.962884 TGTTAGTATCACTACAATGCAATGAT 57.037 30.769 9.20 5.60 34.48 2.45
2315 2328 8.962884 ATGTTAGTATCACTACAATGCAATGA 57.037 30.769 9.20 0.00 28.93 2.57
2347 2360 4.620332 CGGCATTTTCCCTAGCATTGAAAA 60.620 41.667 0.00 0.00 40.89 2.29
2450 2463 1.721926 GCTGTAAGAGTGCTGTCGTTC 59.278 52.381 0.00 0.00 34.07 3.95
2468 2481 2.093764 CAGAGAATGAGAGAAACCCGCT 60.094 50.000 0.00 0.00 0.00 5.52
2477 2490 3.382865 TGTTCGGATCCAGAGAATGAGAG 59.617 47.826 13.41 0.00 0.00 3.20
2520 2533 2.267006 CACCGCTCCATCACTGCT 59.733 61.111 0.00 0.00 0.00 4.24
2538 2551 1.065928 CGTATCGGAGCAGGACACC 59.934 63.158 0.00 0.00 0.00 4.16
2571 2584 2.882876 GGAGAAGGCGACGTAGCA 59.117 61.111 22.25 0.00 39.27 3.49
2627 2640 4.520492 CCTAGAGCAACACAAAGACCAAAT 59.480 41.667 0.00 0.00 0.00 2.32
2636 2649 1.003839 CGCCCCTAGAGCAACACAA 60.004 57.895 5.69 0.00 0.00 3.33
2642 2655 2.037367 ACTCACGCCCCTAGAGCA 59.963 61.111 5.69 0.00 32.71 4.26
2662 2675 9.893305 AAAAATCAATGACCTAAACTAACGAAG 57.107 29.630 0.00 0.00 0.00 3.79
2664 2677 8.293867 CCAAAAATCAATGACCTAAACTAACGA 58.706 33.333 0.00 0.00 0.00 3.85
2692 2709 5.069648 AGCACATACTGTATCACATGCTACT 59.930 40.000 17.23 2.55 37.59 2.57
2726 2743 1.086634 GCAGCCCATGAGACTTCGAC 61.087 60.000 0.00 0.00 0.00 4.20
2727 2744 1.219124 GCAGCCCATGAGACTTCGA 59.781 57.895 0.00 0.00 0.00 3.71
2728 2745 0.461548 TAGCAGCCCATGAGACTTCG 59.538 55.000 0.00 0.00 0.00 3.79
2729 2746 2.926778 ATAGCAGCCCATGAGACTTC 57.073 50.000 0.00 0.00 0.00 3.01
2730 2747 4.989875 ATAATAGCAGCCCATGAGACTT 57.010 40.909 0.00 0.00 0.00 3.01
2740 2757 1.270625 TGCACCCGTATAATAGCAGCC 60.271 52.381 0.00 0.00 0.00 4.85
2748 2765 3.792401 CATGAGAGTTGCACCCGTATAA 58.208 45.455 0.00 0.00 0.00 0.98
2749 2766 2.483013 GCATGAGAGTTGCACCCGTATA 60.483 50.000 0.00 0.00 39.90 1.47
2750 2767 1.743772 GCATGAGAGTTGCACCCGTAT 60.744 52.381 0.00 0.00 39.90 3.06
2751 2768 0.391130 GCATGAGAGTTGCACCCGTA 60.391 55.000 0.00 0.00 39.90 4.02
2752 2769 1.672356 GCATGAGAGTTGCACCCGT 60.672 57.895 0.00 0.00 39.90 5.28
2753 2770 1.364626 GAGCATGAGAGTTGCACCCG 61.365 60.000 0.00 0.00 42.62 5.28
2754 2771 0.035630 AGAGCATGAGAGTTGCACCC 60.036 55.000 0.00 0.00 42.62 4.61
2755 2772 1.085091 CAGAGCATGAGAGTTGCACC 58.915 55.000 0.00 0.00 42.62 5.01
2756 2773 0.447011 GCAGAGCATGAGAGTTGCAC 59.553 55.000 0.00 0.00 42.62 4.57
2757 2774 0.323957 AGCAGAGCATGAGAGTTGCA 59.676 50.000 0.00 0.00 42.62 4.08
2758 2775 1.451067 AAGCAGAGCATGAGAGTTGC 58.549 50.000 0.00 0.00 40.45 4.17
2759 2776 3.125487 CAGAAAGCAGAGCATGAGAGTTG 59.875 47.826 0.00 0.00 0.00 3.16
2760 2777 3.336468 CAGAAAGCAGAGCATGAGAGTT 58.664 45.455 0.00 0.00 0.00 3.01
2761 2778 2.354906 CCAGAAAGCAGAGCATGAGAGT 60.355 50.000 0.00 0.00 0.00 3.24
2762 2779 2.281517 CCAGAAAGCAGAGCATGAGAG 58.718 52.381 0.00 0.00 0.00 3.20
2763 2780 1.627329 ACCAGAAAGCAGAGCATGAGA 59.373 47.619 0.00 0.00 0.00 3.27
2771 2788 5.188555 ACATCATAAGAGACCAGAAAGCAGA 59.811 40.000 0.00 0.00 0.00 4.26
2772 2789 5.426504 ACATCATAAGAGACCAGAAAGCAG 58.573 41.667 0.00 0.00 0.00 4.24
2775 2792 7.912056 TTCAACATCATAAGAGACCAGAAAG 57.088 36.000 0.00 0.00 0.00 2.62
2844 2861 2.154462 CTACTGACAAAACCTGGCCTG 58.846 52.381 3.32 2.54 28.17 4.85
2852 2869 6.036083 ACACGATGCATATCTACTGACAAAAC 59.964 38.462 0.00 0.00 0.00 2.43
2882 2899 1.251251 AGGATCTTGCAACAACCTGC 58.749 50.000 2.66 0.00 42.95 4.85
2883 2900 3.318839 TGAAAGGATCTTGCAACAACCTG 59.681 43.478 4.29 0.00 0.00 4.00
2884 2901 3.319122 GTGAAAGGATCTTGCAACAACCT 59.681 43.478 0.00 0.00 0.00 3.50
2885 2902 3.552890 GGTGAAAGGATCTTGCAACAACC 60.553 47.826 0.00 0.00 0.00 3.77
2886 2903 3.319122 AGGTGAAAGGATCTTGCAACAAC 59.681 43.478 6.47 0.00 0.00 3.32
2887 2904 3.565307 AGGTGAAAGGATCTTGCAACAA 58.435 40.909 6.47 0.00 0.00 2.83
2888 2905 3.228188 AGGTGAAAGGATCTTGCAACA 57.772 42.857 6.47 0.00 0.00 3.33
2889 2906 3.823304 AGAAGGTGAAAGGATCTTGCAAC 59.177 43.478 0.00 0.00 0.00 4.17
2890 2907 4.104383 AGAAGGTGAAAGGATCTTGCAA 57.896 40.909 0.00 0.00 0.00 4.08
2891 2908 3.795688 AGAAGGTGAAAGGATCTTGCA 57.204 42.857 0.00 0.00 0.00 4.08
2892 2909 5.459536 AAAAGAAGGTGAAAGGATCTTGC 57.540 39.130 0.00 0.00 31.14 4.01
2921 2938 8.807667 ATCTTAAAAACAGTGAAAGCAATGAG 57.192 30.769 0.00 0.00 42.40 2.90
2922 2939 8.412456 TGATCTTAAAAACAGTGAAAGCAATGA 58.588 29.630 0.00 0.00 42.40 2.57
2923 2940 8.578308 TGATCTTAAAAACAGTGAAAGCAATG 57.422 30.769 0.00 0.00 45.09 2.82
2924 2941 8.416329 ACTGATCTTAAAAACAGTGAAAGCAAT 58.584 29.630 0.00 0.00 41.16 3.56
2925 2942 7.771183 ACTGATCTTAAAAACAGTGAAAGCAA 58.229 30.769 0.00 0.00 41.16 3.91
2926 2943 7.333528 ACTGATCTTAAAAACAGTGAAAGCA 57.666 32.000 0.00 0.00 41.16 3.91
2957 2974 5.596836 ACAGTGAAAGCAATGAGGAAAAA 57.403 34.783 0.00 0.00 42.40 1.94
2958 2975 5.596836 AACAGTGAAAGCAATGAGGAAAA 57.403 34.783 0.00 0.00 42.40 2.29
2959 2976 5.596836 AAACAGTGAAAGCAATGAGGAAA 57.403 34.783 0.00 0.00 42.40 3.13
2960 2977 5.596836 AAAACAGTGAAAGCAATGAGGAA 57.403 34.783 0.00 0.00 42.40 3.36
2961 2978 5.596836 AAAAACAGTGAAAGCAATGAGGA 57.403 34.783 0.00 0.00 42.40 3.71
2983 3000 8.442374 AGGTTTACCAGGAAAACACTAATCTTA 58.558 33.333 0.00 0.00 38.34 2.10
2993 3010 8.951787 AACATTTTAAGGTTTACCAGGAAAAC 57.048 30.769 0.00 0.00 38.89 2.43
3000 3017 5.897824 TGGTGGAACATTTTAAGGTTTACCA 59.102 36.000 17.91 17.91 44.52 3.25
3002 3019 6.367695 GCATGGTGGAACATTTTAAGGTTTAC 59.632 38.462 0.00 0.00 44.52 2.01
3011 3028 3.731089 CACAAGCATGGTGGAACATTTT 58.269 40.909 6.22 0.00 44.52 1.82
3031 3048 5.021033 ACAACAGGAATTGTGAAATTGCA 57.979 34.783 5.65 0.00 41.29 4.08
3032 3049 6.446318 TCTACAACAGGAATTGTGAAATTGC 58.554 36.000 1.46 0.00 42.74 3.56
3033 3050 7.113404 CGTTCTACAACAGGAATTGTGAAATTG 59.887 37.037 1.46 0.00 42.74 2.32
3034 3051 7.138736 CGTTCTACAACAGGAATTGTGAAATT 58.861 34.615 1.46 0.00 42.74 1.82
3035 3052 6.293955 CCGTTCTACAACAGGAATTGTGAAAT 60.294 38.462 1.46 0.00 42.74 2.17
3036 3053 5.008217 CCGTTCTACAACAGGAATTGTGAAA 59.992 40.000 1.46 0.00 42.74 2.69
3037 3054 4.513692 CCGTTCTACAACAGGAATTGTGAA 59.486 41.667 1.46 1.69 42.74 3.18
3038 3055 4.062293 CCGTTCTACAACAGGAATTGTGA 58.938 43.478 1.46 0.00 42.74 3.58
3039 3056 3.364964 GCCGTTCTACAACAGGAATTGTG 60.365 47.826 1.46 0.00 42.74 3.33
3040 3057 2.812011 GCCGTTCTACAACAGGAATTGT 59.188 45.455 0.00 0.00 44.87 2.71
3041 3058 3.074412 AGCCGTTCTACAACAGGAATTG 58.926 45.455 0.00 0.00 31.54 2.32
3042 3059 3.418684 AGCCGTTCTACAACAGGAATT 57.581 42.857 0.00 0.00 31.54 2.17
3043 3060 3.418684 AAGCCGTTCTACAACAGGAAT 57.581 42.857 0.00 0.00 31.54 3.01
3044 3061 2.922740 AAGCCGTTCTACAACAGGAA 57.077 45.000 0.00 0.00 31.54 3.36
3045 3062 2.922740 AAAGCCGTTCTACAACAGGA 57.077 45.000 0.00 0.00 31.54 3.86
3046 3063 2.225727 GGAAAAGCCGTTCTACAACAGG 59.774 50.000 0.00 0.00 32.14 4.00
3047 3064 3.058914 CAGGAAAAGCCGTTCTACAACAG 60.059 47.826 0.00 0.00 43.43 3.16
3048 3065 2.875933 CAGGAAAAGCCGTTCTACAACA 59.124 45.455 0.00 0.00 43.43 3.33
3049 3066 2.225727 CCAGGAAAAGCCGTTCTACAAC 59.774 50.000 0.00 0.00 43.43 3.32
3050 3067 2.158726 ACCAGGAAAAGCCGTTCTACAA 60.159 45.455 0.00 0.00 43.43 2.41
3065 3082 3.618997 GCCGTCAAAGAAATCTACCAGGA 60.619 47.826 0.00 0.00 0.00 3.86
3089 3107 7.255139 GGTGAAGTATAACAGCACAAAAGTTCT 60.255 37.037 0.00 0.00 35.10 3.01
3090 3108 6.856426 GGTGAAGTATAACAGCACAAAAGTTC 59.144 38.462 0.00 0.00 35.10 3.01
3145 3163 6.757947 CCAACAACCAAGCTTTATGATTATGG 59.242 38.462 0.00 0.00 0.00 2.74
3146 3164 6.256321 GCCAACAACCAAGCTTTATGATTATG 59.744 38.462 0.00 0.00 0.00 1.90
3147 3165 6.340522 GCCAACAACCAAGCTTTATGATTAT 58.659 36.000 0.00 0.00 0.00 1.28
3148 3166 5.337169 GGCCAACAACCAAGCTTTATGATTA 60.337 40.000 0.00 0.00 0.00 1.75
3150 3168 3.055891 GGCCAACAACCAAGCTTTATGAT 60.056 43.478 0.00 0.00 0.00 2.45
3151 3169 2.298729 GGCCAACAACCAAGCTTTATGA 59.701 45.455 0.00 0.00 0.00 2.15
3152 3170 2.299867 AGGCCAACAACCAAGCTTTATG 59.700 45.455 5.01 0.00 0.00 1.90
3154 3172 1.686052 CAGGCCAACAACCAAGCTTTA 59.314 47.619 5.01 0.00 0.00 1.85
3155 3173 0.465287 CAGGCCAACAACCAAGCTTT 59.535 50.000 5.01 0.00 0.00 3.51
3156 3174 0.687427 ACAGGCCAACAACCAAGCTT 60.687 50.000 5.01 0.00 0.00 3.74
3157 3175 0.687427 AACAGGCCAACAACCAAGCT 60.687 50.000 5.01 0.00 0.00 3.74
3158 3176 0.530431 CAACAGGCCAACAACCAAGC 60.530 55.000 5.01 0.00 0.00 4.01
3159 3177 0.104671 CCAACAGGCCAACAACCAAG 59.895 55.000 5.01 0.00 0.00 3.61
3160 3178 0.616111 ACCAACAGGCCAACAACCAA 60.616 50.000 5.01 0.00 0.00 3.67
3161 3179 0.616111 AACCAACAGGCCAACAACCA 60.616 50.000 5.01 0.00 0.00 3.67
3164 3182 1.205893 GAACAACCAACAGGCCAACAA 59.794 47.619 5.01 0.00 0.00 2.83
3171 3189 1.955778 TGATGCTGAACAACCAACAGG 59.044 47.619 0.00 0.00 33.00 4.00
3173 3191 3.005684 GGATTGATGCTGAACAACCAACA 59.994 43.478 0.00 0.00 0.00 3.33
3175 3193 3.229293 TGGATTGATGCTGAACAACCAA 58.771 40.909 0.00 0.00 30.66 3.67
3182 3200 5.583061 GCAATTGAATTGGATTGATGCTGAA 59.417 36.000 18.52 0.00 40.57 3.02
3240 3258 4.390556 AGGAGCAGGGCGAGAGGT 62.391 66.667 0.00 0.00 0.00 3.85
3242 3260 2.015227 GAAGAGGAGCAGGGCGAGAG 62.015 65.000 0.00 0.00 0.00 3.20
3243 3261 2.038007 AAGAGGAGCAGGGCGAGA 59.962 61.111 0.00 0.00 0.00 4.04
3263 3281 3.149196 GGCTGAAAAGATCCAACTGTGA 58.851 45.455 0.00 0.00 0.00 3.58
3268 3286 3.091545 TGGATGGCTGAAAAGATCCAAC 58.908 45.455 0.00 0.00 41.13 3.77
3269 3287 3.091545 GTGGATGGCTGAAAAGATCCAA 58.908 45.455 0.00 0.00 44.66 3.53
3270 3288 2.621407 GGTGGATGGCTGAAAAGATCCA 60.621 50.000 0.00 0.00 41.69 3.41
3271 3289 2.027385 GGTGGATGGCTGAAAAGATCC 58.973 52.381 0.00 0.00 35.80 3.36
3272 3290 1.672881 CGGTGGATGGCTGAAAAGATC 59.327 52.381 0.00 0.00 0.00 2.75
3273 3291 1.755179 CGGTGGATGGCTGAAAAGAT 58.245 50.000 0.00 0.00 0.00 2.40
3274 3292 0.960364 GCGGTGGATGGCTGAAAAGA 60.960 55.000 0.00 0.00 0.00 2.52
3275 3293 1.508088 GCGGTGGATGGCTGAAAAG 59.492 57.895 0.00 0.00 0.00 2.27
3276 3294 2.331893 CGCGGTGGATGGCTGAAAA 61.332 57.895 0.00 0.00 0.00 2.29
3277 3295 2.745884 CGCGGTGGATGGCTGAAA 60.746 61.111 0.00 0.00 0.00 2.69
3278 3296 4.776322 CCGCGGTGGATGGCTGAA 62.776 66.667 19.50 0.00 42.00 3.02
3283 3301 3.814268 CTTTGCCGCGGTGGATGG 61.814 66.667 28.70 8.72 42.00 3.51
3284 3302 3.814268 CCTTTGCCGCGGTGGATG 61.814 66.667 28.70 14.11 42.00 3.51
3288 3306 1.797211 TAAAACCCTTTGCCGCGGTG 61.797 55.000 28.70 14.26 0.00 4.94
3289 3307 1.528776 TAAAACCCTTTGCCGCGGT 60.529 52.632 28.70 4.71 0.00 5.68
3290 3308 1.081041 GTAAAACCCTTTGCCGCGG 60.081 57.895 24.05 24.05 0.00 6.46
3291 3309 0.386731 CAGTAAAACCCTTTGCCGCG 60.387 55.000 0.00 0.00 0.00 6.46
3292 3310 0.038618 CCAGTAAAACCCTTTGCCGC 60.039 55.000 0.00 0.00 0.00 6.53
3293 3311 1.539827 CTCCAGTAAAACCCTTTGCCG 59.460 52.381 0.00 0.00 0.00 5.69
3294 3312 2.594131 ACTCCAGTAAAACCCTTTGCC 58.406 47.619 0.00 0.00 0.00 4.52
3295 3313 4.395625 AGTACTCCAGTAAAACCCTTTGC 58.604 43.478 0.00 0.00 31.52 3.68
3296 3314 8.631480 ATTAAGTACTCCAGTAAAACCCTTTG 57.369 34.615 0.00 0.00 31.52 2.77
3330 3348 2.093921 TGCCGACGGTTGATTAGATCAA 60.094 45.455 16.73 0.00 46.30 2.57
3331 3349 1.478916 TGCCGACGGTTGATTAGATCA 59.521 47.619 16.73 0.00 37.55 2.92
3332 3350 2.128035 CTGCCGACGGTTGATTAGATC 58.872 52.381 16.73 0.00 0.00 2.75
3333 3351 1.480954 ACTGCCGACGGTTGATTAGAT 59.519 47.619 16.73 0.00 27.90 1.98
3334 3352 0.892755 ACTGCCGACGGTTGATTAGA 59.107 50.000 16.73 0.00 27.90 2.10
3335 3353 1.722011 AACTGCCGACGGTTGATTAG 58.278 50.000 16.73 7.22 43.89 1.73
3336 3354 1.801771 CAAACTGCCGACGGTTGATTA 59.198 47.619 16.73 0.00 44.83 1.75
3337 3355 0.591170 CAAACTGCCGACGGTTGATT 59.409 50.000 16.73 6.83 44.83 2.57
3338 3356 1.234615 CCAAACTGCCGACGGTTGAT 61.235 55.000 16.73 0.41 44.83 2.57
3339 3357 1.890041 CCAAACTGCCGACGGTTGA 60.890 57.895 16.73 0.00 44.83 3.18
3340 3358 1.720694 AACCAAACTGCCGACGGTTG 61.721 55.000 16.73 11.59 44.83 3.77
3342 3360 1.033202 AAAACCAAACTGCCGACGGT 61.033 50.000 16.73 0.00 36.79 4.83
3343 3361 0.945813 TAAAACCAAACTGCCGACGG 59.054 50.000 10.29 10.29 0.00 4.79
3344 3362 1.658094 CGTAAAACCAAACTGCCGACG 60.658 52.381 0.00 0.00 0.00 5.12
3345 3363 1.334329 CCGTAAAACCAAACTGCCGAC 60.334 52.381 0.00 0.00 0.00 4.79
3346 3364 0.945813 CCGTAAAACCAAACTGCCGA 59.054 50.000 0.00 0.00 0.00 5.54
3347 3365 0.662077 GCCGTAAAACCAAACTGCCG 60.662 55.000 0.00 0.00 0.00 5.69
3348 3366 0.319211 GGCCGTAAAACCAAACTGCC 60.319 55.000 0.00 0.00 38.54 4.85
3349 3367 0.319211 GGGCCGTAAAACCAAACTGC 60.319 55.000 0.00 0.00 0.00 4.40
3350 3368 1.324383 AGGGCCGTAAAACCAAACTG 58.676 50.000 0.00 0.00 0.00 3.16
3351 3369 2.107031 ACTAGGGCCGTAAAACCAAACT 59.893 45.455 6.62 0.00 0.00 2.66
3352 3370 2.485426 GACTAGGGCCGTAAAACCAAAC 59.515 50.000 6.62 0.00 0.00 2.93
3353 3371 2.106166 TGACTAGGGCCGTAAAACCAAA 59.894 45.455 6.62 0.00 0.00 3.28
3354 3372 1.698532 TGACTAGGGCCGTAAAACCAA 59.301 47.619 6.62 0.00 0.00 3.67
3355 3373 1.002315 GTGACTAGGGCCGTAAAACCA 59.998 52.381 6.62 0.00 0.00 3.67
3356 3374 1.730501 GTGACTAGGGCCGTAAAACC 58.269 55.000 6.62 0.00 0.00 3.27
3357 3375 1.353076 CGTGACTAGGGCCGTAAAAC 58.647 55.000 6.62 4.49 0.00 2.43
3358 3376 0.390209 GCGTGACTAGGGCCGTAAAA 60.390 55.000 6.62 0.00 0.00 1.52
3359 3377 1.216178 GCGTGACTAGGGCCGTAAA 59.784 57.895 6.62 0.00 0.00 2.01
3360 3378 2.713967 GGCGTGACTAGGGCCGTAA 61.714 63.158 6.62 0.00 37.06 3.18
3361 3379 3.142838 GGCGTGACTAGGGCCGTA 61.143 66.667 4.83 4.83 37.06 4.02
3365 3383 0.605589 AAAACAGGCGTGACTAGGGC 60.606 55.000 14.38 0.00 37.50 5.19
3366 3384 1.892209 AAAAACAGGCGTGACTAGGG 58.108 50.000 14.38 0.00 0.00 3.53
3423 3441 6.969366 TCTAAATCGCATCCCAATGTATTTG 58.031 36.000 0.00 0.00 34.84 2.32
3424 3442 7.765695 ATCTAAATCGCATCCCAATGTATTT 57.234 32.000 0.00 0.00 36.01 1.40
3425 3443 7.064609 CGTATCTAAATCGCATCCCAATGTATT 59.935 37.037 0.00 0.00 35.18 1.89
3426 3444 6.535150 CGTATCTAAATCGCATCCCAATGTAT 59.465 38.462 0.00 0.00 35.18 2.29
3427 3445 5.867174 CGTATCTAAATCGCATCCCAATGTA 59.133 40.000 0.00 0.00 35.18 2.29
3428 3446 4.690748 CGTATCTAAATCGCATCCCAATGT 59.309 41.667 0.00 0.00 35.18 2.71
3429 3447 4.093408 CCGTATCTAAATCGCATCCCAATG 59.907 45.833 0.00 0.00 35.87 2.82
3430 3448 4.253685 CCGTATCTAAATCGCATCCCAAT 58.746 43.478 0.00 0.00 0.00 3.16
3431 3449 3.556213 CCCGTATCTAAATCGCATCCCAA 60.556 47.826 0.00 0.00 0.00 4.12
3432 3450 2.028476 CCCGTATCTAAATCGCATCCCA 60.028 50.000 0.00 0.00 0.00 4.37
3433 3451 2.618053 CCCGTATCTAAATCGCATCCC 58.382 52.381 0.00 0.00 0.00 3.85
3434 3452 2.028385 ACCCCGTATCTAAATCGCATCC 60.028 50.000 0.00 0.00 0.00 3.51
3435 3453 3.314541 ACCCCGTATCTAAATCGCATC 57.685 47.619 0.00 0.00 0.00 3.91
3436 3454 4.282703 AGTTACCCCGTATCTAAATCGCAT 59.717 41.667 0.00 0.00 0.00 4.73
3437 3455 3.638160 AGTTACCCCGTATCTAAATCGCA 59.362 43.478 0.00 0.00 0.00 5.10
3438 3456 4.233005 GAGTTACCCCGTATCTAAATCGC 58.767 47.826 0.00 0.00 0.00 4.58
3439 3457 4.279169 TGGAGTTACCCCGTATCTAAATCG 59.721 45.833 0.00 0.00 38.00 3.34
3440 3458 5.303845 ACTGGAGTTACCCCGTATCTAAATC 59.696 44.000 0.00 0.00 38.00 2.17
3441 3459 5.214293 ACTGGAGTTACCCCGTATCTAAAT 58.786 41.667 0.00 0.00 38.00 1.40
3442 3460 4.613437 ACTGGAGTTACCCCGTATCTAAA 58.387 43.478 0.00 0.00 38.00 1.85
3443 3461 4.255510 ACTGGAGTTACCCCGTATCTAA 57.744 45.455 0.00 0.00 38.00 2.10
3444 3462 3.959495 ACTGGAGTTACCCCGTATCTA 57.041 47.619 0.00 0.00 38.00 1.98
3445 3463 2.842645 ACTGGAGTTACCCCGTATCT 57.157 50.000 0.00 0.00 38.00 1.98
3446 3464 3.900966 AAACTGGAGTTACCCCGTATC 57.099 47.619 0.00 0.00 37.25 2.24
3447 3465 4.645863 AAAAACTGGAGTTACCCCGTAT 57.354 40.909 0.00 0.00 37.25 3.06
3500 3518 9.301153 GACTTCTTTTGCTCATTTGTCTAAAAA 57.699 29.630 0.00 0.00 0.00 1.94
3501 3519 8.465999 TGACTTCTTTTGCTCATTTGTCTAAAA 58.534 29.630 0.00 0.00 0.00 1.52
3502 3520 7.915397 GTGACTTCTTTTGCTCATTTGTCTAAA 59.085 33.333 0.00 0.00 0.00 1.85
3503 3521 7.283127 AGTGACTTCTTTTGCTCATTTGTCTAA 59.717 33.333 0.00 0.00 0.00 2.10
3504 3522 6.767902 AGTGACTTCTTTTGCTCATTTGTCTA 59.232 34.615 0.00 0.00 0.00 2.59
3505 3523 5.591877 AGTGACTTCTTTTGCTCATTTGTCT 59.408 36.000 0.00 0.00 0.00 3.41
3506 3524 5.825507 AGTGACTTCTTTTGCTCATTTGTC 58.174 37.500 0.00 0.00 0.00 3.18
3507 3525 5.221126 GGAGTGACTTCTTTTGCTCATTTGT 60.221 40.000 0.00 0.00 0.00 2.83
3508 3526 5.218139 GGAGTGACTTCTTTTGCTCATTTG 58.782 41.667 0.00 0.00 0.00 2.32
3509 3527 4.889409 TGGAGTGACTTCTTTTGCTCATTT 59.111 37.500 0.00 0.00 0.00 2.32
3510 3528 4.464008 TGGAGTGACTTCTTTTGCTCATT 58.536 39.130 0.00 0.00 0.00 2.57
3511 3529 4.070716 CTGGAGTGACTTCTTTTGCTCAT 58.929 43.478 0.00 0.00 0.00 2.90
3512 3530 3.118261 ACTGGAGTGACTTCTTTTGCTCA 60.118 43.478 0.00 0.00 0.00 4.26
3513 3531 3.471680 ACTGGAGTGACTTCTTTTGCTC 58.528 45.455 0.00 0.00 0.00 4.26
3514 3532 3.567478 ACTGGAGTGACTTCTTTTGCT 57.433 42.857 0.00 0.00 0.00 3.91
3515 3533 3.243201 CCAACTGGAGTGACTTCTTTTGC 60.243 47.826 0.00 0.00 37.39 3.68
3516 3534 4.199310 TCCAACTGGAGTGACTTCTTTTG 58.801 43.478 0.00 0.00 39.78 2.44
3517 3535 4.503714 TCCAACTGGAGTGACTTCTTTT 57.496 40.909 0.00 0.00 39.78 2.27
3530 3548 1.825191 CCGCCATCCATCCAACTGG 60.825 63.158 0.00 0.00 37.66 4.00
3531 3549 2.484062 GCCGCCATCCATCCAACTG 61.484 63.158 0.00 0.00 0.00 3.16
3532 3550 2.124151 GCCGCCATCCATCCAACT 60.124 61.111 0.00 0.00 0.00 3.16
3533 3551 3.585990 CGCCGCCATCCATCCAAC 61.586 66.667 0.00 0.00 0.00 3.77
3575 3593 4.740822 CTTTCCTGGGCCCACGGG 62.741 72.222 29.39 26.14 38.29 5.28
3576 3594 4.740822 CCTTTCCTGGGCCCACGG 62.741 72.222 24.45 25.62 0.00 4.94
3577 3595 3.628646 CTCCTTTCCTGGGCCCACG 62.629 68.421 24.45 18.62 0.00 4.94
3578 3596 2.356667 CTCCTTTCCTGGGCCCAC 59.643 66.667 24.45 0.00 0.00 4.61
3579 3597 2.941025 CCTCCTTTCCTGGGCCCA 60.941 66.667 26.67 26.67 0.00 5.36
3580 3598 4.448976 GCCTCCTTTCCTGGGCCC 62.449 72.222 17.59 17.59 38.77 5.80
3581 3599 4.803908 CGCCTCCTTTCCTGGGCC 62.804 72.222 0.00 0.00 41.35 5.80
3582 3600 2.949705 GATCGCCTCCTTTCCTGGGC 62.950 65.000 0.00 0.00 41.02 5.36
3583 3601 1.147153 GATCGCCTCCTTTCCTGGG 59.853 63.158 0.00 0.00 0.00 4.45
3584 3602 1.227380 CGATCGCCTCCTTTCCTGG 60.227 63.158 0.26 0.00 0.00 4.45
3585 3603 1.884926 GCGATCGCCTCCTTTCCTG 60.885 63.158 29.48 0.00 34.56 3.86
3586 3604 2.060980 AGCGATCGCCTCCTTTCCT 61.061 57.895 34.89 11.77 43.17 3.36
3587 3605 1.884926 CAGCGATCGCCTCCTTTCC 60.885 63.158 34.89 5.96 43.17 3.13
3588 3606 2.529619 GCAGCGATCGCCTCCTTTC 61.530 63.158 34.89 8.37 43.17 2.62
3589 3607 2.512515 GCAGCGATCGCCTCCTTT 60.513 61.111 34.89 14.16 43.17 3.11
3590 3608 2.914777 GAAGCAGCGATCGCCTCCTT 62.915 60.000 34.89 30.22 43.17 3.36
3591 3609 3.438017 GAAGCAGCGATCGCCTCCT 62.438 63.158 34.89 24.54 43.17 3.69
3592 3610 2.964389 GAAGCAGCGATCGCCTCC 60.964 66.667 34.89 22.77 43.17 4.30
3593 3611 3.326210 CGAAGCAGCGATCGCCTC 61.326 66.667 34.89 25.73 43.17 4.70
3594 3612 4.880537 CCGAAGCAGCGATCGCCT 62.881 66.667 34.89 23.30 43.17 5.52
3595 3613 3.768185 TACCGAAGCAGCGATCGCC 62.768 63.158 34.89 21.37 43.17 5.54
3596 3614 2.278596 TACCGAAGCAGCGATCGC 60.279 61.111 32.15 32.15 37.73 4.58
3597 3615 0.525668 AACTACCGAAGCAGCGATCG 60.526 55.000 11.69 11.69 38.74 3.69
3598 3616 0.924090 CAACTACCGAAGCAGCGATC 59.076 55.000 0.00 0.00 0.00 3.69
3599 3617 1.084370 GCAACTACCGAAGCAGCGAT 61.084 55.000 0.00 0.00 0.00 4.58
3600 3618 1.736645 GCAACTACCGAAGCAGCGA 60.737 57.895 0.00 0.00 0.00 4.93
3601 3619 1.687494 GAGCAACTACCGAAGCAGCG 61.687 60.000 0.00 0.00 34.44 5.18
3602 3620 1.687494 CGAGCAACTACCGAAGCAGC 61.687 60.000 0.00 0.00 0.00 5.25
3603 3621 0.388649 ACGAGCAACTACCGAAGCAG 60.389 55.000 0.00 0.00 0.00 4.24
3604 3622 0.032952 AACGAGCAACTACCGAAGCA 59.967 50.000 0.00 0.00 0.00 3.91
3605 3623 0.714439 GAACGAGCAACTACCGAAGC 59.286 55.000 0.00 0.00 0.00 3.86
3606 3624 1.347320 GGAACGAGCAACTACCGAAG 58.653 55.000 0.00 0.00 0.00 3.79
3607 3625 0.037975 GGGAACGAGCAACTACCGAA 60.038 55.000 0.00 0.00 0.00 4.30
3608 3626 1.588082 GGGAACGAGCAACTACCGA 59.412 57.895 0.00 0.00 0.00 4.69
3609 3627 4.180496 GGGAACGAGCAACTACCG 57.820 61.111 0.00 0.00 0.00 4.02
3624 3642 2.907897 GAACCAGCGATCCAGACGGG 62.908 65.000 0.00 0.00 38.37 5.28
3625 3643 1.519455 GAACCAGCGATCCAGACGG 60.519 63.158 0.00 0.00 0.00 4.79
3626 3644 1.078759 GTGAACCAGCGATCCAGACG 61.079 60.000 0.00 0.00 0.00 4.18
3627 3645 0.741221 GGTGAACCAGCGATCCAGAC 60.741 60.000 0.00 0.00 35.64 3.51
3628 3646 1.596934 GGTGAACCAGCGATCCAGA 59.403 57.895 0.00 0.00 35.64 3.86
3629 3647 4.208632 GGTGAACCAGCGATCCAG 57.791 61.111 0.00 0.00 35.64 3.86
3636 3654 2.426023 ACCAGACGGTGAACCAGC 59.574 61.111 0.00 0.00 46.79 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.