Multiple sequence alignment - TraesCS7D01G167100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G167100 chr7D 100.000 2533 0 0 1 2533 117604141 117606673 0.000000e+00 4678.0
1 TraesCS7D01G167100 chr7D 92.244 361 26 2 1809 2168 523062065 523062424 6.250000e-141 510.0
2 TraesCS7D01G167100 chr7A 90.476 1218 80 14 242 1439 122030233 122031434 0.000000e+00 1574.0
3 TraesCS7D01G167100 chr7A 90.476 420 37 2 1812 2228 675484451 675484032 3.680000e-153 551.0
4 TraesCS7D01G167100 chr7A 91.103 281 21 3 1532 1811 122034065 122034342 6.610000e-101 377.0
5 TraesCS7D01G167100 chr7A 91.339 127 11 0 1420 1546 122031504 122031630 9.310000e-40 174.0
6 TraesCS7D01G167100 chr7B 94.004 517 27 4 242 754 78115086 78115602 0.000000e+00 780.0
7 TraesCS7D01G167100 chr7B 90.691 376 18 6 1072 1447 78115648 78116006 3.790000e-133 484.0
8 TraesCS7D01G167100 chr7B 88.013 317 27 4 2223 2533 78117677 78117988 5.150000e-97 364.0
9 TraesCS7D01G167100 chr7B 93.750 240 14 1 1437 1675 78116050 78116289 2.400000e-95 359.0
10 TraesCS7D01G167100 chr7B 87.075 147 13 3 1671 1811 78116410 78116556 7.250000e-36 161.0
11 TraesCS7D01G167100 chr7B 86.813 91 9 2 93 182 621923484 621923396 5.770000e-17 99.0
12 TraesCS7D01G167100 chr3A 90.974 421 32 4 1811 2228 673609626 673609209 1.700000e-156 562.0
13 TraesCS7D01G167100 chr3A 86.897 145 17 2 2227 2370 177707435 177707292 7.250000e-36 161.0
14 TraesCS7D01G167100 chr3A 95.604 91 4 0 1 91 187819773 187819863 2.030000e-31 147.0
15 TraesCS7D01G167100 chr3A 89.167 120 8 2 93 212 685824742 685824856 7.300000e-31 145.0
16 TraesCS7D01G167100 chr3A 80.986 142 22 3 2263 2404 120849900 120849764 9.580000e-20 108.0
17 TraesCS7D01G167100 chr1B 91.400 407 32 1 1822 2225 564437440 564437846 2.850000e-154 555.0
18 TraesCS7D01G167100 chr1B 80.392 153 18 8 93 243 517158163 517158305 3.450000e-19 106.0
19 TraesCS7D01G167100 chr6B 90.453 419 37 2 1810 2225 507914237 507914655 1.320000e-152 549.0
20 TraesCS7D01G167100 chr6B 86.811 417 30 9 1812 2225 391098731 391099125 2.310000e-120 442.0
21 TraesCS7D01G167100 chr5B 90.408 417 35 3 1811 2222 61209252 61208836 6.160000e-151 544.0
22 TraesCS7D01G167100 chr5B 80.576 139 20 5 2276 2409 356358217 356358353 1.600000e-17 100.0
23 TraesCS7D01G167100 chr5B 94.444 36 1 1 215 249 336173028 336173063 1.000000e-03 54.7
24 TraesCS7D01G167100 chr4A 90.909 407 34 1 1812 2215 445871987 445872393 6.160000e-151 544.0
25 TraesCS7D01G167100 chr4A 96.703 91 3 0 1 91 436059067 436059157 4.360000e-33 152.0
26 TraesCS7D01G167100 chr4A 86.992 123 12 2 90 212 669944905 669945023 4.400000e-28 135.0
27 TraesCS7D01G167100 chr4A 76.687 163 25 6 93 243 574711896 574711735 7.510000e-11 78.7
28 TraesCS7D01G167100 chr3B 88.993 427 41 4 1802 2225 679273180 679273603 8.030000e-145 523.0
29 TraesCS7D01G167100 chr3B 87.500 120 11 2 93 212 19859424 19859309 4.400000e-28 135.0
30 TraesCS7D01G167100 chr6D 92.667 300 19 1 1808 2104 414242739 414243038 1.800000e-116 429.0
31 TraesCS7D01G167100 chr5D 79.724 217 31 12 2229 2440 377298769 377298977 7.300000e-31 145.0
32 TraesCS7D01G167100 chr5D 84.921 126 15 2 91 212 520704004 520703879 9.510000e-25 124.0
33 TraesCS7D01G167100 chr5A 94.318 88 5 0 1 88 516048538 516048625 4.400000e-28 135.0
34 TraesCS7D01G167100 chr5A 78.049 164 20 8 93 243 37040149 37040309 3.470000e-14 89.8
35 TraesCS7D01G167100 chr2B 86.992 123 13 1 90 212 764685623 764685504 4.400000e-28 135.0
36 TraesCS7D01G167100 chr2B 86.667 120 11 2 93 212 779129014 779129128 7.360000e-26 128.0
37 TraesCS7D01G167100 chrUn 93.182 88 6 0 1 88 132287307 132287394 2.050000e-26 130.0
38 TraesCS7D01G167100 chr2D 87.719 114 11 2 96 209 531479759 531479649 2.050000e-26 130.0
39 TraesCS7D01G167100 chr2A 85.000 120 10 3 93 212 378139893 378140004 5.730000e-22 115.0
40 TraesCS7D01G167100 chr1D 96.774 31 1 0 213 243 5306663 5306633 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G167100 chr7D 117604141 117606673 2532 False 4678.000000 4678 100.000000 1 2533 1 chr7D.!!$F1 2532
1 TraesCS7D01G167100 chr7A 122030233 122034342 4109 False 708.333333 1574 90.972667 242 1811 3 chr7A.!!$F1 1569
2 TraesCS7D01G167100 chr7B 78115086 78117988 2902 False 429.600000 780 90.706600 242 2533 5 chr7B.!!$F1 2291

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
180 181 0.034896 ATTCGTGCTGAACCGGAACT 59.965 50.0 9.46 0.0 40.0 3.01 F
874 895 0.036294 GAAGGAAACGGAGGAGGTGG 60.036 60.0 0.00 0.0 0.0 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1451 1564 0.174617 TGACACGATCGCCTGCATAA 59.825 50.0 16.60 0.0 0.0 1.90 R
2196 5767 0.036388 ATGGAACGCGGTGAGATGTT 60.036 50.0 12.47 0.0 0.0 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 66 9.775854 TCAGCAAATGAAAAAGAATTAAATGGA 57.224 25.926 0.00 0.00 34.02 3.41
94 95 8.941977 ACACAAAATTAAAGGAAAAAGAACACC 58.058 29.630 0.00 0.00 0.00 4.16
95 96 8.940952 CACAAAATTAAAGGAAAAAGAACACCA 58.059 29.630 0.00 0.00 0.00 4.17
96 97 9.508642 ACAAAATTAAAGGAAAAAGAACACCAA 57.491 25.926 0.00 0.00 0.00 3.67
97 98 9.767684 CAAAATTAAAGGAAAAAGAACACCAAC 57.232 29.630 0.00 0.00 0.00 3.77
98 99 8.500753 AAATTAAAGGAAAAAGAACACCAACC 57.499 30.769 0.00 0.00 0.00 3.77
99 100 3.793797 AAGGAAAAAGAACACCAACCG 57.206 42.857 0.00 0.00 0.00 4.44
100 101 2.028876 AGGAAAAAGAACACCAACCGG 58.971 47.619 0.00 0.00 38.77 5.28
102 103 2.950975 GGAAAAAGAACACCAACCGGTA 59.049 45.455 8.00 0.00 46.94 4.02
103 104 3.243168 GGAAAAAGAACACCAACCGGTAC 60.243 47.826 8.00 0.00 46.94 3.34
104 105 3.286329 AAAAGAACACCAACCGGTACT 57.714 42.857 8.00 0.00 46.94 2.73
105 106 4.420522 AAAAGAACACCAACCGGTACTA 57.579 40.909 8.00 0.00 46.94 1.82
106 107 4.420522 AAAGAACACCAACCGGTACTAA 57.579 40.909 8.00 0.00 46.94 2.24
107 108 4.628963 AAGAACACCAACCGGTACTAAT 57.371 40.909 8.00 0.00 46.94 1.73
108 109 3.934068 AGAACACCAACCGGTACTAATG 58.066 45.455 8.00 0.73 46.94 1.90
109 110 2.773993 ACACCAACCGGTACTAATGG 57.226 50.000 18.75 18.75 46.94 3.16
110 111 1.980036 ACACCAACCGGTACTAATGGT 59.020 47.619 20.02 20.02 46.94 3.55
111 112 2.027837 ACACCAACCGGTACTAATGGTC 60.028 50.000 22.34 0.00 46.94 4.02
112 113 2.235402 CACCAACCGGTACTAATGGTCT 59.765 50.000 22.34 2.54 46.94 3.85
113 114 2.498885 ACCAACCGGTACTAATGGTCTC 59.501 50.000 20.02 0.00 46.71 3.36
114 115 2.159000 CCAACCGGTACTAATGGTCTCC 60.159 54.545 8.00 0.00 34.11 3.71
115 116 1.785647 ACCGGTACTAATGGTCTCCC 58.214 55.000 4.49 0.00 0.00 4.30
116 117 1.046204 CCGGTACTAATGGTCTCCCC 58.954 60.000 0.00 0.00 0.00 4.81
117 118 0.672342 CGGTACTAATGGTCTCCCCG 59.328 60.000 0.00 0.00 35.15 5.73
118 119 0.391966 GGTACTAATGGTCTCCCCGC 59.608 60.000 0.00 0.00 35.15 6.13
119 120 0.391966 GTACTAATGGTCTCCCCGCC 59.608 60.000 0.00 0.00 35.15 6.13
120 121 0.761702 TACTAATGGTCTCCCCGCCC 60.762 60.000 0.00 0.00 35.15 6.13
121 122 2.770904 TAATGGTCTCCCCGCCCC 60.771 66.667 0.00 0.00 35.15 5.80
155 156 3.870606 CACGTCGTGGCCCTTTAG 58.129 61.111 17.75 0.00 0.00 1.85
156 157 1.005394 CACGTCGTGGCCCTTTAGT 60.005 57.895 17.75 0.00 0.00 2.24
157 158 1.005394 ACGTCGTGGCCCTTTAGTG 60.005 57.895 0.00 0.00 0.00 2.74
158 159 1.290955 CGTCGTGGCCCTTTAGTGA 59.709 57.895 0.00 0.00 0.00 3.41
159 160 1.012486 CGTCGTGGCCCTTTAGTGAC 61.012 60.000 0.00 0.00 0.00 3.67
160 161 1.012486 GTCGTGGCCCTTTAGTGACG 61.012 60.000 0.00 0.00 0.00 4.35
161 162 1.180456 TCGTGGCCCTTTAGTGACGA 61.180 55.000 0.00 2.91 33.72 4.20
162 163 0.108329 CGTGGCCCTTTAGTGACGAT 60.108 55.000 0.00 0.00 0.00 3.73
163 164 1.674817 CGTGGCCCTTTAGTGACGATT 60.675 52.381 0.00 0.00 0.00 3.34
164 165 2.007608 GTGGCCCTTTAGTGACGATTC 58.992 52.381 0.00 0.00 0.00 2.52
165 166 1.287425 GGCCCTTTAGTGACGATTCG 58.713 55.000 4.14 4.14 0.00 3.34
166 167 1.405121 GGCCCTTTAGTGACGATTCGT 60.405 52.381 12.25 12.25 45.10 3.85
167 168 1.659098 GCCCTTTAGTGACGATTCGTG 59.341 52.381 17.75 0.00 41.37 4.35
168 169 1.659098 CCCTTTAGTGACGATTCGTGC 59.341 52.381 17.75 9.19 41.37 5.34
169 170 2.607187 CCTTTAGTGACGATTCGTGCT 58.393 47.619 17.75 15.75 41.37 4.40
170 171 2.345641 CCTTTAGTGACGATTCGTGCTG 59.654 50.000 17.75 3.41 41.37 4.41
171 172 3.242518 CTTTAGTGACGATTCGTGCTGA 58.757 45.455 17.75 8.39 41.37 4.26
172 173 3.291809 TTAGTGACGATTCGTGCTGAA 57.708 42.857 17.75 2.98 41.37 3.02
173 174 1.419374 AGTGACGATTCGTGCTGAAC 58.581 50.000 17.75 6.91 41.37 3.18
174 175 0.438830 GTGACGATTCGTGCTGAACC 59.561 55.000 17.75 0.48 41.37 3.62
176 177 3.081133 CGATTCGTGCTGAACCGG 58.919 61.111 0.00 0.00 40.08 5.28
177 178 1.445410 CGATTCGTGCTGAACCGGA 60.445 57.895 9.46 0.00 40.08 5.14
178 179 1.011968 CGATTCGTGCTGAACCGGAA 61.012 55.000 9.46 0.00 40.08 4.30
179 180 0.442699 GATTCGTGCTGAACCGGAAC 59.557 55.000 9.46 1.34 40.00 3.62
180 181 0.034896 ATTCGTGCTGAACCGGAACT 59.965 50.000 9.46 0.00 40.00 3.01
181 182 0.675083 TTCGTGCTGAACCGGAACTA 59.325 50.000 9.46 0.00 0.00 2.24
182 183 0.675083 TCGTGCTGAACCGGAACTAA 59.325 50.000 9.46 0.00 0.00 2.24
183 184 1.068895 TCGTGCTGAACCGGAACTAAA 59.931 47.619 9.46 0.00 0.00 1.85
184 185 2.073816 CGTGCTGAACCGGAACTAAAT 58.926 47.619 9.46 0.00 0.00 1.40
185 186 2.482721 CGTGCTGAACCGGAACTAAATT 59.517 45.455 9.46 0.00 0.00 1.82
186 187 3.666902 CGTGCTGAACCGGAACTAAATTG 60.667 47.826 9.46 0.00 0.00 2.32
187 188 2.817258 TGCTGAACCGGAACTAAATTGG 59.183 45.455 9.46 0.00 0.00 3.16
188 189 2.163613 GCTGAACCGGAACTAAATTGGG 59.836 50.000 9.46 0.00 0.00 4.12
189 190 2.752903 CTGAACCGGAACTAAATTGGGG 59.247 50.000 9.46 0.00 0.00 4.96
190 191 2.097036 GAACCGGAACTAAATTGGGGG 58.903 52.381 9.46 0.00 0.00 5.40
214 215 1.652947 GACCTTTAGTCCCCACCAGA 58.347 55.000 0.00 0.00 39.84 3.86
215 216 1.982958 GACCTTTAGTCCCCACCAGAA 59.017 52.381 0.00 0.00 39.84 3.02
216 217 1.703513 ACCTTTAGTCCCCACCAGAAC 59.296 52.381 0.00 0.00 0.00 3.01
217 218 1.004394 CCTTTAGTCCCCACCAGAACC 59.996 57.143 0.00 0.00 0.00 3.62
218 219 0.688487 TTTAGTCCCCACCAGAACCG 59.312 55.000 0.00 0.00 0.00 4.44
219 220 1.833787 TTAGTCCCCACCAGAACCGC 61.834 60.000 0.00 0.00 0.00 5.68
220 221 4.717313 GTCCCCACCAGAACCGCC 62.717 72.222 0.00 0.00 0.00 6.13
223 224 3.953775 CCCACCAGAACCGCCACT 61.954 66.667 0.00 0.00 0.00 4.00
224 225 2.589157 CCCACCAGAACCGCCACTA 61.589 63.158 0.00 0.00 0.00 2.74
225 226 1.373435 CCACCAGAACCGCCACTAA 59.627 57.895 0.00 0.00 0.00 2.24
226 227 0.250553 CCACCAGAACCGCCACTAAA 60.251 55.000 0.00 0.00 0.00 1.85
227 228 1.156736 CACCAGAACCGCCACTAAAG 58.843 55.000 0.00 0.00 0.00 1.85
228 229 0.036306 ACCAGAACCGCCACTAAAGG 59.964 55.000 0.00 0.00 0.00 3.11
229 230 0.676782 CCAGAACCGCCACTAAAGGG 60.677 60.000 0.00 0.00 0.00 3.95
236 237 2.776659 GCCACTAAAGGGCCTTACG 58.223 57.895 21.25 15.66 45.87 3.18
237 238 0.251073 GCCACTAAAGGGCCTTACGA 59.749 55.000 21.25 7.25 45.87 3.43
238 239 1.339342 GCCACTAAAGGGCCTTACGAA 60.339 52.381 21.25 4.81 45.87 3.85
239 240 2.353323 CCACTAAAGGGCCTTACGAAC 58.647 52.381 21.25 0.00 0.00 3.95
240 241 2.353323 CACTAAAGGGCCTTACGAACC 58.647 52.381 21.25 0.00 0.00 3.62
429 431 6.907212 GCACATGTCATTGTATGCTAGTTTAC 59.093 38.462 0.00 0.00 0.00 2.01
444 446 8.458573 TGCTAGTTTACAGAGGAAATGAAAAA 57.541 30.769 0.00 0.00 0.00 1.94
455 459 9.688592 CAGAGGAAATGAAAAAGGCATATTATC 57.311 33.333 0.00 0.00 0.00 1.75
549 558 7.907841 ACCATTTATAGGGTGGGTTTTTATC 57.092 36.000 0.00 0.00 36.99 1.75
606 615 9.745880 TGTCGGCATTTATTTAAGTTGTTTTTA 57.254 25.926 0.00 0.00 0.00 1.52
758 777 5.480205 ACTGGAAAGGATTTTCTACGTCTC 58.520 41.667 0.00 0.00 39.27 3.36
842 863 2.799917 CGGAAGCAGATAGAAACCGGAG 60.800 54.545 9.46 0.00 36.08 4.63
843 864 2.431057 GGAAGCAGATAGAAACCGGAGA 59.569 50.000 9.46 0.00 0.00 3.71
849 870 4.462133 CAGATAGAAACCGGAGAGTAGGA 58.538 47.826 9.46 0.00 0.00 2.94
850 871 4.517453 CAGATAGAAACCGGAGAGTAGGAG 59.483 50.000 9.46 0.00 0.00 3.69
851 872 2.903375 AGAAACCGGAGAGTAGGAGT 57.097 50.000 9.46 0.00 0.00 3.85
852 873 5.369110 AGATAGAAACCGGAGAGTAGGAGTA 59.631 44.000 9.46 0.00 0.00 2.59
853 874 3.619419 AGAAACCGGAGAGTAGGAGTAC 58.381 50.000 9.46 0.00 0.00 2.73
874 895 0.036294 GAAGGAAACGGAGGAGGTGG 60.036 60.000 0.00 0.00 0.00 4.61
923 944 3.994392 CCGAATCCATAAATACGGACAGG 59.006 47.826 0.00 0.00 42.40 4.00
924 945 4.262292 CCGAATCCATAAATACGGACAGGA 60.262 45.833 0.00 0.00 42.40 3.86
925 946 5.479306 CGAATCCATAAATACGGACAGGAT 58.521 41.667 0.00 0.00 36.02 3.24
926 947 5.348724 CGAATCCATAAATACGGACAGGATG 59.651 44.000 0.00 0.00 46.00 3.51
927 948 4.002906 TCCATAAATACGGACAGGATGC 57.997 45.455 0.00 0.00 42.53 3.91
964 985 2.761208 TCCCAGGAAAGAGAAGTCGATC 59.239 50.000 0.00 0.00 0.00 3.69
998 1019 2.346365 GAAGGGAGCGAAACCGGT 59.654 61.111 0.00 0.00 40.78 5.28
1045 1066 4.200283 CGAGGAGGCTCGCTGGTC 62.200 72.222 8.69 0.00 40.05 4.02
1140 1161 4.803908 CCAGCTTCCCCGGCCTTC 62.804 72.222 0.00 0.00 0.00 3.46
1142 1163 4.035102 AGCTTCCCCGGCCTTCAC 62.035 66.667 0.00 0.00 0.00 3.18
1191 1212 7.653311 CACGGATTCTTATGACTCATGATGTAA 59.347 37.037 0.00 0.00 0.00 2.41
1200 1221 9.571810 TTATGACTCATGATGTAATTTTGCAAC 57.428 29.630 0.00 0.00 0.00 4.17
1268 1289 1.969256 CTCGTGGCGAAAATCAAAACG 59.031 47.619 0.00 0.00 34.74 3.60
1373 1394 5.105023 TCAGCTGCTTGAGTATCTTTCTCAT 60.105 40.000 9.47 0.00 40.83 2.90
1387 1408 5.482908 TCTTTCTCATCAAGTCAAGCCTAC 58.517 41.667 0.00 0.00 0.00 3.18
1418 1439 1.429463 CTCACTGGTAAACTCGCACC 58.571 55.000 0.00 0.00 35.24 5.01
1419 1440 1.000955 CTCACTGGTAAACTCGCACCT 59.999 52.381 0.00 0.00 35.73 4.00
1430 1543 1.299541 CTCGCACCTCTCTCTCTCTC 58.700 60.000 0.00 0.00 0.00 3.20
1434 1547 2.565841 GCACCTCTCTCTCTCTCTCTC 58.434 57.143 0.00 0.00 0.00 3.20
1451 1564 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1465 1578 1.268079 TCTCTCTTATGCAGGCGATCG 59.732 52.381 11.69 11.69 0.00 3.69
1489 1602 1.135859 CATCGAGCAACAACCTTCAGC 60.136 52.381 0.00 0.00 0.00 4.26
1610 4172 2.749441 GGAGCCAGCAGGAGCAAC 60.749 66.667 0.00 0.00 45.49 4.17
1624 4186 1.127582 GAGCAACAGCGTCAACATCTC 59.872 52.381 0.00 0.00 0.00 2.75
1626 4188 2.029020 AGCAACAGCGTCAACATCTCTA 60.029 45.455 0.00 0.00 0.00 2.43
1768 4462 5.077564 TGGAGTGACAAGCTTTCTAGTCTA 58.922 41.667 13.84 4.07 32.41 2.59
1798 4492 5.220172 GCTTTTAAGATTCGTCTACGTGTCC 60.220 44.000 0.00 0.00 40.80 4.02
1807 4501 2.059541 GTCTACGTGTCCTGTTGCTTC 58.940 52.381 0.00 0.00 0.00 3.86
1811 4505 1.299541 CGTGTCCTGTTGCTTCTGTT 58.700 50.000 0.00 0.00 0.00 3.16
1814 4508 3.427503 CGTGTCCTGTTGCTTCTGTTTTT 60.428 43.478 0.00 0.00 0.00 1.94
1835 4529 2.217429 TTTGAAACGGAGGCAAAAGC 57.783 45.000 0.00 0.00 0.00 3.51
1839 4533 2.167487 TGAAACGGAGGCAAAAGCTTTT 59.833 40.909 18.74 18.74 0.00 2.27
1840 4534 2.509052 AACGGAGGCAAAAGCTTTTC 57.491 45.000 21.45 15.23 0.00 2.29
1841 4535 0.673985 ACGGAGGCAAAAGCTTTTCC 59.326 50.000 21.45 22.14 0.00 3.13
1842 4536 0.961753 CGGAGGCAAAAGCTTTTCCT 59.038 50.000 28.25 28.25 33.45 3.36
1843 4537 1.068264 CGGAGGCAAAAGCTTTTCCTC 60.068 52.381 34.31 34.31 40.18 3.71
1844 4538 1.963515 GGAGGCAAAAGCTTTTCCTCA 59.036 47.619 37.59 0.00 41.28 3.86
1845 4539 2.564504 GGAGGCAAAAGCTTTTCCTCAT 59.435 45.455 37.59 24.62 41.28 2.90
1847 4541 3.504375 AGGCAAAAGCTTTTCCTCATCT 58.496 40.909 25.08 14.02 0.00 2.90
1848 4542 3.509184 AGGCAAAAGCTTTTCCTCATCTC 59.491 43.478 25.08 6.73 0.00 2.75
1849 4543 3.256631 GGCAAAAGCTTTTCCTCATCTCA 59.743 43.478 21.45 0.00 0.00 3.27
1851 4545 5.476614 GCAAAAGCTTTTCCTCATCTCATT 58.523 37.500 21.45 0.00 0.00 2.57
1854 4548 7.763071 GCAAAAGCTTTTCCTCATCTCATTAAT 59.237 33.333 21.45 0.00 0.00 1.40
1878 4572 8.830915 ATAAAGAAGAGAGTAATCAGGTCTCA 57.169 34.615 0.00 0.00 39.43 3.27
1880 4574 6.773976 AGAAGAGAGTAATCAGGTCTCAAG 57.226 41.667 0.00 0.00 39.43 3.02
1881 4575 6.489603 AGAAGAGAGTAATCAGGTCTCAAGA 58.510 40.000 0.00 0.00 39.43 3.02
1882 4576 6.603201 AGAAGAGAGTAATCAGGTCTCAAGAG 59.397 42.308 0.00 0.00 39.43 2.85
1883 4577 5.200483 AGAGAGTAATCAGGTCTCAAGAGG 58.800 45.833 0.00 0.00 39.43 3.69
1885 4579 4.027437 GAGTAATCAGGTCTCAAGAGGGT 58.973 47.826 0.00 0.00 0.00 4.34
1886 4580 4.027437 AGTAATCAGGTCTCAAGAGGGTC 58.973 47.826 0.00 0.00 0.00 4.46
1887 4581 2.630889 ATCAGGTCTCAAGAGGGTCA 57.369 50.000 0.00 0.00 0.00 4.02
1888 4582 2.630889 TCAGGTCTCAAGAGGGTCAT 57.369 50.000 0.00 0.00 0.00 3.06
1892 5100 3.772025 CAGGTCTCAAGAGGGTCATTACT 59.228 47.826 0.00 0.00 0.00 2.24
1896 5104 4.098807 GTCTCAAGAGGGTCATTACTCCTC 59.901 50.000 0.00 0.00 40.59 3.71
1901 5109 2.838202 GAGGGTCATTACTCCTCCACAA 59.162 50.000 0.00 0.00 37.22 3.33
1904 5112 3.947834 GGGTCATTACTCCTCCACAAATG 59.052 47.826 0.00 0.00 0.00 2.32
1908 5116 6.127897 GGTCATTACTCCTCCACAAATGAAAG 60.128 42.308 0.00 0.00 38.06 2.62
1912 5120 7.889873 TTACTCCTCCACAAATGAAAGAAAA 57.110 32.000 0.00 0.00 0.00 2.29
1915 5123 8.115490 ACTCCTCCACAAATGAAAGAAAATAG 57.885 34.615 0.00 0.00 0.00 1.73
1917 5125 8.340618 TCCTCCACAAATGAAAGAAAATAGAG 57.659 34.615 0.00 0.00 0.00 2.43
1919 5127 7.094032 CCTCCACAAATGAAAGAAAATAGAGCT 60.094 37.037 0.00 0.00 0.00 4.09
1921 5129 8.730680 TCCACAAATGAAAGAAAATAGAGCTAC 58.269 33.333 0.00 0.00 0.00 3.58
1922 5130 8.734386 CCACAAATGAAAGAAAATAGAGCTACT 58.266 33.333 0.00 0.00 0.00 2.57
1923 5131 9.766277 CACAAATGAAAGAAAATAGAGCTACTC 57.234 33.333 0.00 0.00 0.00 2.59
1924 5132 9.732130 ACAAATGAAAGAAAATAGAGCTACTCT 57.268 29.630 2.23 2.23 43.83 3.24
1926 5134 8.641499 AATGAAAGAAAATAGAGCTACTCTCG 57.359 34.615 0.00 0.00 46.44 4.04
1927 5135 6.037098 TGAAAGAAAATAGAGCTACTCTCGC 58.963 40.000 0.00 0.00 46.44 5.03
1928 5136 4.217754 AGAAAATAGAGCTACTCTCGCG 57.782 45.455 0.00 0.00 46.44 5.87
1929 5137 2.409152 AAATAGAGCTACTCTCGCGC 57.591 50.000 0.00 0.00 46.44 6.86
1930 5138 0.594110 AATAGAGCTACTCTCGCGCC 59.406 55.000 0.00 0.00 46.44 6.53
1931 5139 0.535328 ATAGAGCTACTCTCGCGCCA 60.535 55.000 0.00 0.00 46.44 5.69
1932 5140 0.535328 TAGAGCTACTCTCGCGCCAT 60.535 55.000 0.00 0.00 46.44 4.40
1933 5141 1.371145 GAGCTACTCTCGCGCCATC 60.371 63.158 0.00 0.00 31.20 3.51
1934 5142 2.064723 GAGCTACTCTCGCGCCATCA 62.065 60.000 0.00 0.00 31.20 3.07
1935 5143 1.226974 GCTACTCTCGCGCCATCAA 60.227 57.895 0.00 0.00 0.00 2.57
1936 5144 0.598680 GCTACTCTCGCGCCATCAAT 60.599 55.000 0.00 0.00 0.00 2.57
1937 5145 1.135046 CTACTCTCGCGCCATCAATG 58.865 55.000 0.00 0.00 0.00 2.82
1938 5146 0.744281 TACTCTCGCGCCATCAATGA 59.256 50.000 0.00 0.00 0.00 2.57
1939 5147 0.105593 ACTCTCGCGCCATCAATGAT 59.894 50.000 0.00 0.00 0.00 2.45
1940 5148 0.788995 CTCTCGCGCCATCAATGATC 59.211 55.000 0.00 0.00 0.00 2.92
1941 5149 0.601046 TCTCGCGCCATCAATGATCC 60.601 55.000 0.00 0.00 0.00 3.36
1942 5150 1.572085 CTCGCGCCATCAATGATCCC 61.572 60.000 0.00 0.00 0.00 3.85
1943 5151 1.893335 CGCGCCATCAATGATCCCA 60.893 57.895 0.00 0.00 0.00 4.37
1944 5152 1.446516 CGCGCCATCAATGATCCCAA 61.447 55.000 0.00 0.00 0.00 4.12
1945 5153 0.746063 GCGCCATCAATGATCCCAAA 59.254 50.000 0.00 0.00 0.00 3.28
1946 5154 1.342174 GCGCCATCAATGATCCCAAAT 59.658 47.619 0.00 0.00 0.00 2.32
1947 5155 2.864882 GCGCCATCAATGATCCCAAATG 60.865 50.000 0.00 0.00 0.00 2.32
1948 5156 2.363038 CGCCATCAATGATCCCAAATGT 59.637 45.455 0.00 0.00 0.00 2.71
1949 5157 3.181473 CGCCATCAATGATCCCAAATGTT 60.181 43.478 0.00 0.00 0.00 2.71
1950 5158 4.681244 CGCCATCAATGATCCCAAATGTTT 60.681 41.667 0.00 0.00 0.00 2.83
1951 5159 5.451659 CGCCATCAATGATCCCAAATGTTTA 60.452 40.000 0.00 0.00 0.00 2.01
1952 5160 5.987347 GCCATCAATGATCCCAAATGTTTAG 59.013 40.000 0.00 0.00 0.00 1.85
1953 5161 5.987347 CCATCAATGATCCCAAATGTTTAGC 59.013 40.000 0.00 0.00 0.00 3.09
1954 5162 5.596836 TCAATGATCCCAAATGTTTAGCC 57.403 39.130 0.00 0.00 0.00 3.93
1955 5163 4.405358 TCAATGATCCCAAATGTTTAGCCC 59.595 41.667 0.00 0.00 0.00 5.19
1956 5164 2.745968 TGATCCCAAATGTTTAGCCCC 58.254 47.619 0.00 0.00 0.00 5.80
1957 5165 1.681264 GATCCCAAATGTTTAGCCCCG 59.319 52.381 0.00 0.00 0.00 5.73
1958 5166 0.323908 TCCCAAATGTTTAGCCCCGG 60.324 55.000 0.00 0.00 0.00 5.73
1959 5167 1.515487 CCAAATGTTTAGCCCCGGC 59.485 57.895 0.00 0.00 42.33 6.13
1960 5168 1.515487 CAAATGTTTAGCCCCGGCC 59.485 57.895 1.02 0.00 43.17 6.13
1961 5169 1.077625 AAATGTTTAGCCCCGGCCA 59.922 52.632 2.24 0.00 43.17 5.36
1962 5170 0.543174 AAATGTTTAGCCCCGGCCAA 60.543 50.000 2.24 0.00 43.17 4.52
1963 5171 0.970427 AATGTTTAGCCCCGGCCAAG 60.970 55.000 2.24 0.00 43.17 3.61
1964 5172 3.449227 GTTTAGCCCCGGCCAAGC 61.449 66.667 2.24 1.16 43.17 4.01
1965 5173 4.751820 TTTAGCCCCGGCCAAGCC 62.752 66.667 2.24 0.00 46.75 4.35
1975 5183 2.945510 GGCCAAGCCCCAATTTTTG 58.054 52.632 0.00 0.00 44.06 2.44
1988 5196 5.467035 CCAATTTTTGGCCTCTACTTTGA 57.533 39.130 3.32 0.00 45.17 2.69
1989 5197 6.041423 CCAATTTTTGGCCTCTACTTTGAT 57.959 37.500 3.32 0.00 45.17 2.57
1990 5198 5.870978 CCAATTTTTGGCCTCTACTTTGATG 59.129 40.000 3.32 0.00 45.17 3.07
1991 5199 4.519540 TTTTTGGCCTCTACTTTGATGC 57.480 40.909 3.32 0.00 0.00 3.91
1992 5200 2.128771 TTGGCCTCTACTTTGATGCC 57.871 50.000 3.32 4.30 44.47 4.40
1993 5201 0.255890 TGGCCTCTACTTTGATGCCC 59.744 55.000 3.32 0.00 43.88 5.36
1994 5202 0.815615 GGCCTCTACTTTGATGCCCG 60.816 60.000 0.00 0.00 40.38 6.13
1995 5203 1.440145 GCCTCTACTTTGATGCCCGC 61.440 60.000 0.00 0.00 0.00 6.13
1996 5204 1.154205 CCTCTACTTTGATGCCCGCG 61.154 60.000 0.00 0.00 0.00 6.46
1997 5205 0.179111 CTCTACTTTGATGCCCGCGA 60.179 55.000 8.23 0.00 0.00 5.87
1998 5206 0.248012 TCTACTTTGATGCCCGCGAA 59.752 50.000 8.23 0.00 0.00 4.70
1999 5207 0.373716 CTACTTTGATGCCCGCGAAC 59.626 55.000 8.23 0.00 0.00 3.95
2000 5208 0.320858 TACTTTGATGCCCGCGAACA 60.321 50.000 8.23 5.38 0.00 3.18
2001 5209 1.154225 CTTTGATGCCCGCGAACAC 60.154 57.895 8.23 1.04 0.00 3.32
2002 5210 1.851021 CTTTGATGCCCGCGAACACA 61.851 55.000 8.23 0.00 0.00 3.72
2003 5211 1.851021 TTTGATGCCCGCGAACACAG 61.851 55.000 8.23 0.00 0.00 3.66
2004 5212 2.742372 GATGCCCGCGAACACAGT 60.742 61.111 8.23 0.00 0.00 3.55
2005 5213 2.281484 ATGCCCGCGAACACAGTT 60.281 55.556 8.23 0.00 0.00 3.16
2006 5214 2.513065 GATGCCCGCGAACACAGTTG 62.513 60.000 8.23 0.00 0.00 3.16
2007 5215 3.276846 GCCCGCGAACACAGTTGT 61.277 61.111 8.23 0.00 37.67 3.32
2009 5217 1.010125 CCCGCGAACACAGTTGTTG 60.010 57.895 8.23 0.00 46.43 3.33
2010 5218 1.010125 CCGCGAACACAGTTGTTGG 60.010 57.895 8.23 0.00 46.43 3.77
2015 5223 3.187478 CGAACACAGTTGTTGGCATAG 57.813 47.619 0.00 0.00 46.43 2.23
2016 5224 2.805671 CGAACACAGTTGTTGGCATAGA 59.194 45.455 0.00 0.00 46.43 1.98
2017 5225 3.249799 CGAACACAGTTGTTGGCATAGAA 59.750 43.478 0.00 0.00 46.43 2.10
2018 5226 4.611355 CGAACACAGTTGTTGGCATAGAAG 60.611 45.833 0.00 0.00 46.43 2.85
2019 5227 4.085357 ACACAGTTGTTGGCATAGAAGA 57.915 40.909 0.00 0.00 28.43 2.87
2020 5228 4.655963 ACACAGTTGTTGGCATAGAAGAT 58.344 39.130 0.00 0.00 28.43 2.40
2021 5229 5.072741 ACACAGTTGTTGGCATAGAAGATT 58.927 37.500 0.00 0.00 28.43 2.40
2022 5230 5.536161 ACACAGTTGTTGGCATAGAAGATTT 59.464 36.000 0.00 0.00 28.43 2.17
2023 5231 6.088824 CACAGTTGTTGGCATAGAAGATTTC 58.911 40.000 0.00 0.00 0.00 2.17
2024 5232 6.006449 ACAGTTGTTGGCATAGAAGATTTCT 58.994 36.000 0.00 0.00 43.72 2.52
2025 5233 6.491403 ACAGTTGTTGGCATAGAAGATTTCTT 59.509 34.615 0.00 0.00 41.14 2.52
2038 5246 5.763088 GAAGATTTCTTCTGGAACACCAAC 58.237 41.667 12.10 0.00 46.59 3.77
2039 5247 4.792068 AGATTTCTTCTGGAACACCAACA 58.208 39.130 0.00 0.00 33.13 3.33
2040 5248 4.580580 AGATTTCTTCTGGAACACCAACAC 59.419 41.667 0.00 0.00 33.13 3.32
2041 5249 3.358111 TTCTTCTGGAACACCAACACA 57.642 42.857 0.00 0.00 32.95 3.72
2042 5250 3.576078 TCTTCTGGAACACCAACACAT 57.424 42.857 0.00 0.00 32.95 3.21
2043 5251 3.897239 TCTTCTGGAACACCAACACATT 58.103 40.909 0.00 0.00 32.95 2.71
2044 5252 4.277476 TCTTCTGGAACACCAACACATTT 58.723 39.130 0.00 0.00 32.95 2.32
2045 5253 4.338118 TCTTCTGGAACACCAACACATTTC 59.662 41.667 0.00 0.00 32.95 2.17
2046 5254 3.897239 TCTGGAACACCAACACATTTCT 58.103 40.909 0.00 0.00 32.95 2.52
2047 5255 3.882888 TCTGGAACACCAACACATTTCTC 59.117 43.478 0.00 0.00 32.95 2.87
2048 5256 3.885297 CTGGAACACCAACACATTTCTCT 59.115 43.478 0.00 0.00 32.95 3.10
2049 5257 3.882888 TGGAACACCAACACATTTCTCTC 59.117 43.478 0.00 0.00 0.00 3.20
2050 5258 4.137543 GGAACACCAACACATTTCTCTCT 58.862 43.478 0.00 0.00 0.00 3.10
2051 5259 4.580580 GGAACACCAACACATTTCTCTCTT 59.419 41.667 0.00 0.00 0.00 2.85
2052 5260 5.067805 GGAACACCAACACATTTCTCTCTTT 59.932 40.000 0.00 0.00 0.00 2.52
2053 5261 5.757850 ACACCAACACATTTCTCTCTTTC 57.242 39.130 0.00 0.00 0.00 2.62
2054 5262 4.580580 ACACCAACACATTTCTCTCTTTCC 59.419 41.667 0.00 0.00 0.00 3.13
2055 5263 4.580167 CACCAACACATTTCTCTCTTTCCA 59.420 41.667 0.00 0.00 0.00 3.53
2056 5264 5.067674 CACCAACACATTTCTCTCTTTCCAA 59.932 40.000 0.00 0.00 0.00 3.53
2057 5265 5.656416 ACCAACACATTTCTCTCTTTCCAAA 59.344 36.000 0.00 0.00 0.00 3.28
2058 5266 5.979517 CCAACACATTTCTCTCTTTCCAAAC 59.020 40.000 0.00 0.00 0.00 2.93
2059 5267 5.774498 ACACATTTCTCTCTTTCCAAACC 57.226 39.130 0.00 0.00 0.00 3.27
2060 5268 5.449553 ACACATTTCTCTCTTTCCAAACCT 58.550 37.500 0.00 0.00 0.00 3.50
2061 5269 5.532779 ACACATTTCTCTCTTTCCAAACCTC 59.467 40.000 0.00 0.00 0.00 3.85
2062 5270 5.048434 CACATTTCTCTCTTTCCAAACCTCC 60.048 44.000 0.00 0.00 0.00 4.30
2063 5271 3.402628 TTCTCTCTTTCCAAACCTCCG 57.597 47.619 0.00 0.00 0.00 4.63
2064 5272 2.605257 TCTCTCTTTCCAAACCTCCGA 58.395 47.619 0.00 0.00 0.00 4.55
2065 5273 2.563179 TCTCTCTTTCCAAACCTCCGAG 59.437 50.000 0.00 0.00 0.00 4.63
2066 5274 1.623811 TCTCTTTCCAAACCTCCGAGG 59.376 52.381 13.31 13.31 42.49 4.63
2067 5275 1.623811 CTCTTTCCAAACCTCCGAGGA 59.376 52.381 21.89 0.00 37.67 3.71
2068 5276 2.237392 CTCTTTCCAAACCTCCGAGGAT 59.763 50.000 21.89 6.39 37.67 3.24
2069 5277 3.446968 TCTTTCCAAACCTCCGAGGATA 58.553 45.455 21.89 0.00 37.67 2.59
2070 5278 3.197116 TCTTTCCAAACCTCCGAGGATAC 59.803 47.826 21.89 0.00 37.67 2.24
2071 5279 2.241281 TCCAAACCTCCGAGGATACA 57.759 50.000 21.89 0.00 37.67 2.29
2072 5280 2.542550 TCCAAACCTCCGAGGATACAA 58.457 47.619 21.89 0.74 37.67 2.41
2073 5281 2.500098 TCCAAACCTCCGAGGATACAAG 59.500 50.000 21.89 4.76 37.67 3.16
2074 5282 2.280628 CAAACCTCCGAGGATACAAGC 58.719 52.381 21.89 0.00 37.67 4.01
2075 5283 0.460311 AACCTCCGAGGATACAAGCG 59.540 55.000 21.89 0.00 37.67 4.68
2076 5284 0.395311 ACCTCCGAGGATACAAGCGA 60.395 55.000 21.89 0.00 37.67 4.93
2077 5285 0.962489 CCTCCGAGGATACAAGCGAT 59.038 55.000 9.01 0.00 37.67 4.58
2078 5286 2.160205 CCTCCGAGGATACAAGCGATA 58.840 52.381 9.01 0.00 37.67 2.92
2079 5287 2.755655 CCTCCGAGGATACAAGCGATAT 59.244 50.000 9.01 0.00 37.67 1.63
2080 5288 3.945921 CCTCCGAGGATACAAGCGATATA 59.054 47.826 9.01 0.00 37.67 0.86
2081 5289 4.398358 CCTCCGAGGATACAAGCGATATAA 59.602 45.833 9.01 0.00 37.67 0.98
2082 5290 5.449314 CCTCCGAGGATACAAGCGATATAAG 60.449 48.000 9.01 0.00 37.67 1.73
2083 5291 5.008331 TCCGAGGATACAAGCGATATAAGT 58.992 41.667 0.00 0.00 41.41 2.24
2084 5292 5.096169 CCGAGGATACAAGCGATATAAGTG 58.904 45.833 0.00 0.00 41.41 3.16
2085 5293 5.106277 CCGAGGATACAAGCGATATAAGTGA 60.106 44.000 0.00 0.00 41.41 3.41
2086 5294 6.024664 CGAGGATACAAGCGATATAAGTGAG 58.975 44.000 0.00 0.00 41.41 3.51
2087 5295 6.274157 AGGATACAAGCGATATAAGTGAGG 57.726 41.667 0.00 0.00 41.41 3.86
2088 5296 6.010850 AGGATACAAGCGATATAAGTGAGGA 58.989 40.000 0.00 0.00 41.41 3.71
2089 5297 6.665680 AGGATACAAGCGATATAAGTGAGGAT 59.334 38.462 0.00 0.00 41.41 3.24
2090 5298 7.834681 AGGATACAAGCGATATAAGTGAGGATA 59.165 37.037 0.00 0.00 41.41 2.59
2091 5299 8.634444 GGATACAAGCGATATAAGTGAGGATAT 58.366 37.037 0.00 0.00 0.00 1.63
2092 5300 9.457110 GATACAAGCGATATAAGTGAGGATATG 57.543 37.037 0.00 0.00 0.00 1.78
2093 5301 6.634805 ACAAGCGATATAAGTGAGGATATGG 58.365 40.000 0.00 0.00 0.00 2.74
2094 5302 5.269505 AGCGATATAAGTGAGGATATGGC 57.730 43.478 0.00 0.00 39.01 4.40
2095 5303 4.959210 AGCGATATAAGTGAGGATATGGCT 59.041 41.667 5.80 5.80 42.08 4.75
2096 5304 5.423610 AGCGATATAAGTGAGGATATGGCTT 59.576 40.000 5.80 0.00 43.43 4.35
2097 5305 6.070538 AGCGATATAAGTGAGGATATGGCTTT 60.071 38.462 5.80 0.00 43.43 3.51
2098 5306 6.595716 GCGATATAAGTGAGGATATGGCTTTT 59.404 38.462 0.00 0.00 37.02 2.27
2099 5307 7.201565 GCGATATAAGTGAGGATATGGCTTTTC 60.202 40.741 0.00 0.00 37.02 2.29
2100 5308 8.037758 CGATATAAGTGAGGATATGGCTTTTCT 58.962 37.037 0.00 0.00 0.00 2.52
2101 5309 9.377312 GATATAAGTGAGGATATGGCTTTTCTC 57.623 37.037 0.00 0.00 0.00 2.87
2102 5310 4.429854 AGTGAGGATATGGCTTTTCTCC 57.570 45.455 0.00 0.00 0.00 3.71
2103 5311 3.134458 GTGAGGATATGGCTTTTCTCCG 58.866 50.000 0.00 0.00 0.00 4.63
2104 5312 2.104792 TGAGGATATGGCTTTTCTCCGG 59.895 50.000 0.00 0.00 0.00 5.14
2105 5313 2.104963 GAGGATATGGCTTTTCTCCGGT 59.895 50.000 0.00 0.00 0.00 5.28
2106 5314 2.158755 AGGATATGGCTTTTCTCCGGTG 60.159 50.000 0.00 0.00 0.00 4.94
2107 5315 1.604278 GATATGGCTTTTCTCCGGTGC 59.396 52.381 0.00 0.00 0.00 5.01
2108 5316 0.393808 TATGGCTTTTCTCCGGTGCC 60.394 55.000 0.00 7.79 43.49 5.01
2109 5317 3.062466 GGCTTTTCTCCGGTGCCC 61.062 66.667 0.00 0.00 37.81 5.36
2110 5318 2.282180 GCTTTTCTCCGGTGCCCA 60.282 61.111 0.00 0.00 0.00 5.36
2111 5319 2.626780 GCTTTTCTCCGGTGCCCAC 61.627 63.158 0.00 0.00 0.00 4.61
2112 5320 2.281208 TTTTCTCCGGTGCCCACG 60.281 61.111 0.00 0.00 0.00 4.94
2124 5332 4.363990 CCCACGCTCGAGCACAGT 62.364 66.667 34.69 22.52 42.21 3.55
2126 5334 3.168604 CACGCTCGAGCACAGTCG 61.169 66.667 34.69 20.43 42.21 4.18
2129 5337 1.581402 CGCTCGAGCACAGTCGTAG 60.581 63.158 34.69 13.08 42.21 3.51
2130 5338 1.870016 GCTCGAGCACAGTCGTAGC 60.870 63.158 31.91 0.17 40.93 3.58
2131 5339 1.226435 CTCGAGCACAGTCGTAGCC 60.226 63.158 0.00 0.00 40.93 3.93
2132 5340 2.202623 CGAGCACAGTCGTAGCCC 60.203 66.667 0.00 0.00 35.14 5.19
2137 5345 1.374252 CACAGTCGTAGCCCACCAC 60.374 63.158 0.00 0.00 0.00 4.16
2138 5346 1.533273 ACAGTCGTAGCCCACCACT 60.533 57.895 0.00 0.00 0.00 4.00
2139 5347 1.215647 CAGTCGTAGCCCACCACTC 59.784 63.158 0.00 0.00 0.00 3.51
2142 5350 1.982395 TCGTAGCCCACCACTCCTG 60.982 63.158 0.00 0.00 0.00 3.86
2147 5355 3.706373 CCCACCACTCCTGGACCG 61.706 72.222 0.00 0.00 40.55 4.79
2148 5356 2.923035 CCACCACTCCTGGACCGT 60.923 66.667 0.00 0.00 40.55 4.83
2149 5357 2.516888 CCACCACTCCTGGACCGTT 61.517 63.158 0.00 0.00 40.55 4.44
2150 5358 1.301716 CACCACTCCTGGACCGTTG 60.302 63.158 0.00 0.00 40.55 4.10
2151 5359 2.347490 CCACTCCTGGACCGTTGG 59.653 66.667 0.00 0.00 40.55 3.77
2152 5360 2.347490 CACTCCTGGACCGTTGGG 59.653 66.667 0.00 0.00 40.11 4.12
2159 5730 2.257409 CTGGACCGTTGGGATCCCTG 62.257 65.000 31.05 19.78 36.97 4.45
2160 5731 2.298661 GGACCGTTGGGATCCCTGT 61.299 63.158 31.05 21.28 36.97 4.00
2164 5735 1.682849 CGTTGGGATCCCTGTCCAA 59.317 57.895 31.05 14.24 40.17 3.53
2168 5739 2.190578 GGATCCCTGTCCAAGCGG 59.809 66.667 0.00 0.00 38.20 5.52
2171 5742 3.335356 ATCCCTGTCCAAGCGGCAG 62.335 63.158 1.45 0.00 36.65 4.85
2173 5744 3.052082 CCTGTCCAAGCGGCAGTG 61.052 66.667 1.45 0.00 35.72 3.66
2174 5745 2.281070 CTGTCCAAGCGGCAGTGT 60.281 61.111 1.45 0.00 33.95 3.55
2175 5746 2.280797 TGTCCAAGCGGCAGTGTC 60.281 61.111 1.45 0.00 0.00 3.67
2176 5747 3.050275 GTCCAAGCGGCAGTGTCC 61.050 66.667 1.45 0.00 0.00 4.02
2177 5748 3.555324 TCCAAGCGGCAGTGTCCA 61.555 61.111 1.45 0.00 0.00 4.02
2178 5749 3.052082 CCAAGCGGCAGTGTCCAG 61.052 66.667 1.45 0.00 0.00 3.86
2179 5750 3.730761 CAAGCGGCAGTGTCCAGC 61.731 66.667 1.45 7.86 0.00 4.85
2182 5753 4.687215 GCGGCAGTGTCCAGCTCA 62.687 66.667 0.00 0.00 0.00 4.26
2183 5754 2.433838 CGGCAGTGTCCAGCTCAG 60.434 66.667 4.76 0.00 0.00 3.35
2184 5755 2.046507 GGCAGTGTCCAGCTCAGG 60.047 66.667 0.00 0.00 0.00 3.86
2186 5757 2.433838 CAGTGTCCAGCTCAGGCG 60.434 66.667 0.00 0.00 44.37 5.52
2187 5758 4.385405 AGTGTCCAGCTCAGGCGC 62.385 66.667 0.00 0.00 44.37 6.53
2188 5759 4.687215 GTGTCCAGCTCAGGCGCA 62.687 66.667 10.83 0.00 44.37 6.09
2189 5760 3.709633 TGTCCAGCTCAGGCGCAT 61.710 61.111 10.83 0.00 44.37 4.73
2191 5762 4.166888 TCCAGCTCAGGCGCATCC 62.167 66.667 10.83 0.00 44.37 3.51
2192 5763 4.478371 CCAGCTCAGGCGCATCCA 62.478 66.667 10.83 0.00 44.37 3.41
2194 5765 4.853050 AGCTCAGGCGCATCCAGC 62.853 66.667 10.83 12.37 44.37 4.85
2203 5774 2.020131 CGCATCCAGCCAACATCTC 58.980 57.895 0.00 0.00 41.38 2.75
2204 5775 0.745486 CGCATCCAGCCAACATCTCA 60.745 55.000 0.00 0.00 41.38 3.27
2205 5776 0.737219 GCATCCAGCCAACATCTCAC 59.263 55.000 0.00 0.00 37.23 3.51
2206 5777 1.386533 CATCCAGCCAACATCTCACC 58.613 55.000 0.00 0.00 0.00 4.02
2207 5778 0.107508 ATCCAGCCAACATCTCACCG 60.108 55.000 0.00 0.00 0.00 4.94
2208 5779 2.401766 CCAGCCAACATCTCACCGC 61.402 63.158 0.00 0.00 0.00 5.68
2209 5780 2.434884 AGCCAACATCTCACCGCG 60.435 61.111 0.00 0.00 0.00 6.46
2210 5781 2.742372 GCCAACATCTCACCGCGT 60.742 61.111 4.92 0.00 0.00 6.01
2212 5783 1.787847 CCAACATCTCACCGCGTTC 59.212 57.895 4.92 0.00 0.00 3.95
2215 5786 0.036388 AACATCTCACCGCGTTCCAT 60.036 50.000 4.92 0.00 0.00 3.41
2217 5788 1.412710 ACATCTCACCGCGTTCCATAT 59.587 47.619 4.92 0.00 0.00 1.78
2219 5790 0.529773 TCTCACCGCGTTCCATATGC 60.530 55.000 4.92 0.00 35.32 3.14
2224 5818 3.022287 GCGTTCCATATGCGGGTG 58.978 61.111 0.00 0.00 0.00 4.61
2234 5828 3.433031 CCATATGCGGGTGTAGGAAGAAA 60.433 47.826 0.00 0.00 0.00 2.52
2239 5833 2.417787 GCGGGTGTAGGAAGAAACGTAT 60.418 50.000 0.00 0.00 0.00 3.06
2252 5846 6.872547 GGAAGAAACGTATAGAAAGAGTGGTT 59.127 38.462 0.00 0.00 0.00 3.67
2253 5847 7.148623 GGAAGAAACGTATAGAAAGAGTGGTTG 60.149 40.741 0.00 0.00 0.00 3.77
2255 5849 6.645415 AGAAACGTATAGAAAGAGTGGTTGTG 59.355 38.462 0.00 0.00 0.00 3.33
2305 5899 3.719214 GTTCCGGACGATGCCATC 58.281 61.111 1.83 0.00 0.00 3.51
2335 5929 2.046447 AGGAGAAGGATGAGGGGAAGAA 59.954 50.000 0.00 0.00 0.00 2.52
2336 5930 2.171659 GGAGAAGGATGAGGGGAAGAAC 59.828 54.545 0.00 0.00 0.00 3.01
2337 5931 2.171659 GAGAAGGATGAGGGGAAGAACC 59.828 54.545 0.00 0.00 38.08 3.62
2401 5995 5.922053 AGGACGAGTTTTAACCTACTTTGT 58.078 37.500 0.00 0.00 0.00 2.83
2411 6005 9.803130 GTTTTAACCTACTTTGTCGATTACTTC 57.197 33.333 0.00 0.00 0.00 3.01
2425 6019 1.143373 TACTTCGCCGCATGCTTACG 61.143 55.000 17.13 15.97 38.05 3.18
2428 6022 3.185365 CGCCGCATGCTTACGTCA 61.185 61.111 17.13 0.00 38.05 4.35
2433 6027 1.225745 GCATGCTTACGTCACGCAC 60.226 57.895 11.37 0.00 36.37 5.34
2445 6039 2.163390 CACGCACGATGAGGCTCTG 61.163 63.158 16.72 6.59 0.00 3.35
2511 6111 4.574599 AATCATCTAATGCCGAAAAGCC 57.425 40.909 0.00 0.00 0.00 4.35
2512 6112 3.281727 TCATCTAATGCCGAAAAGCCT 57.718 42.857 0.00 0.00 0.00 4.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 9.775854 TCCATTTAATTCTTTTTCATTTGCTGA 57.224 25.926 0.00 0.00 0.00 4.26
68 69 8.941977 GGTGTTCTTTTTCCTTTAATTTTGTGT 58.058 29.630 0.00 0.00 0.00 3.72
69 70 8.940952 TGGTGTTCTTTTTCCTTTAATTTTGTG 58.059 29.630 0.00 0.00 0.00 3.33
70 71 9.508642 TTGGTGTTCTTTTTCCTTTAATTTTGT 57.491 25.926 0.00 0.00 0.00 2.83
71 72 9.767684 GTTGGTGTTCTTTTTCCTTTAATTTTG 57.232 29.630 0.00 0.00 0.00 2.44
72 73 8.952278 GGTTGGTGTTCTTTTTCCTTTAATTTT 58.048 29.630 0.00 0.00 0.00 1.82
73 74 7.279090 CGGTTGGTGTTCTTTTTCCTTTAATTT 59.721 33.333 0.00 0.00 0.00 1.82
74 75 6.759356 CGGTTGGTGTTCTTTTTCCTTTAATT 59.241 34.615 0.00 0.00 0.00 1.40
75 76 6.277605 CGGTTGGTGTTCTTTTTCCTTTAAT 58.722 36.000 0.00 0.00 0.00 1.40
76 77 5.394333 CCGGTTGGTGTTCTTTTTCCTTTAA 60.394 40.000 0.00 0.00 0.00 1.52
77 78 4.098196 CCGGTTGGTGTTCTTTTTCCTTTA 59.902 41.667 0.00 0.00 0.00 1.85
78 79 3.118920 CCGGTTGGTGTTCTTTTTCCTTT 60.119 43.478 0.00 0.00 0.00 3.11
79 80 2.429250 CCGGTTGGTGTTCTTTTTCCTT 59.571 45.455 0.00 0.00 0.00 3.36
80 81 2.028876 CCGGTTGGTGTTCTTTTTCCT 58.971 47.619 0.00 0.00 0.00 3.36
81 82 2.502213 CCGGTTGGTGTTCTTTTTCC 57.498 50.000 0.00 0.00 0.00 3.13
93 94 2.159000 GGAGACCATTAGTACCGGTTGG 60.159 54.545 15.04 17.37 42.84 3.77
94 95 3.175109 GGAGACCATTAGTACCGGTTG 57.825 52.381 15.04 3.82 31.63 3.77
138 139 1.005394 ACTAAAGGGCCACGACGTG 60.005 57.895 21.02 21.02 0.00 4.49
139 140 1.005394 CACTAAAGGGCCACGACGT 60.005 57.895 6.18 0.00 0.00 4.34
140 141 1.012486 GTCACTAAAGGGCCACGACG 61.012 60.000 6.18 0.00 0.00 5.12
141 142 1.012486 CGTCACTAAAGGGCCACGAC 61.012 60.000 6.18 1.62 0.00 4.34
142 143 1.180456 TCGTCACTAAAGGGCCACGA 61.180 55.000 6.18 7.71 34.08 4.35
143 144 0.108329 ATCGTCACTAAAGGGCCACG 60.108 55.000 6.18 4.95 0.00 4.94
144 145 2.007608 GAATCGTCACTAAAGGGCCAC 58.992 52.381 6.18 0.00 0.00 5.01
145 146 1.404986 CGAATCGTCACTAAAGGGCCA 60.405 52.381 6.18 0.00 0.00 5.36
146 147 1.287425 CGAATCGTCACTAAAGGGCC 58.713 55.000 0.00 0.00 0.00 5.80
147 148 1.659098 CACGAATCGTCACTAAAGGGC 59.341 52.381 4.88 0.00 38.32 5.19
148 149 1.659098 GCACGAATCGTCACTAAAGGG 59.341 52.381 4.88 0.00 38.32 3.95
149 150 2.345641 CAGCACGAATCGTCACTAAAGG 59.654 50.000 4.88 0.00 38.32 3.11
150 151 3.242518 TCAGCACGAATCGTCACTAAAG 58.757 45.455 4.88 0.00 38.32 1.85
151 152 3.291809 TCAGCACGAATCGTCACTAAA 57.708 42.857 4.88 0.00 38.32 1.85
152 153 2.984471 GTTCAGCACGAATCGTCACTAA 59.016 45.455 4.88 0.00 38.32 2.24
153 154 2.592194 GTTCAGCACGAATCGTCACTA 58.408 47.619 4.88 0.00 38.32 2.74
154 155 1.419374 GTTCAGCACGAATCGTCACT 58.581 50.000 4.88 3.41 38.32 3.41
155 156 0.438830 GGTTCAGCACGAATCGTCAC 59.561 55.000 4.88 0.65 38.32 3.67
156 157 2.822306 GGTTCAGCACGAATCGTCA 58.178 52.632 4.88 0.00 38.32 4.35
160 161 0.442699 GTTCCGGTTCAGCACGAATC 59.557 55.000 0.00 0.00 35.63 2.52
161 162 0.034896 AGTTCCGGTTCAGCACGAAT 59.965 50.000 0.00 0.00 35.63 3.34
162 163 0.675083 TAGTTCCGGTTCAGCACGAA 59.325 50.000 0.00 0.00 0.00 3.85
163 164 0.675083 TTAGTTCCGGTTCAGCACGA 59.325 50.000 0.00 0.00 0.00 4.35
164 165 1.504359 TTTAGTTCCGGTTCAGCACG 58.496 50.000 0.00 0.00 0.00 5.34
165 166 3.365969 CCAATTTAGTTCCGGTTCAGCAC 60.366 47.826 0.00 0.00 0.00 4.40
166 167 2.817258 CCAATTTAGTTCCGGTTCAGCA 59.183 45.455 0.00 0.00 0.00 4.41
167 168 2.163613 CCCAATTTAGTTCCGGTTCAGC 59.836 50.000 0.00 0.00 0.00 4.26
168 169 2.752903 CCCCAATTTAGTTCCGGTTCAG 59.247 50.000 0.00 0.00 0.00 3.02
169 170 2.555670 CCCCCAATTTAGTTCCGGTTCA 60.556 50.000 0.00 0.00 0.00 3.18
170 171 2.097036 CCCCCAATTTAGTTCCGGTTC 58.903 52.381 0.00 0.00 0.00 3.62
171 172 2.225382 CCCCCAATTTAGTTCCGGTT 57.775 50.000 0.00 0.00 0.00 4.44
172 173 3.991972 CCCCCAATTTAGTTCCGGT 57.008 52.632 0.00 0.00 0.00 5.28
195 196 1.652947 TCTGGTGGGGACTAAAGGTC 58.347 55.000 0.00 0.00 43.79 3.85
196 197 1.703513 GTTCTGGTGGGGACTAAAGGT 59.296 52.381 0.00 0.00 0.00 3.50
197 198 1.004394 GGTTCTGGTGGGGACTAAAGG 59.996 57.143 0.00 0.00 0.00 3.11
198 199 1.338769 CGGTTCTGGTGGGGACTAAAG 60.339 57.143 0.00 0.00 0.00 1.85
199 200 0.688487 CGGTTCTGGTGGGGACTAAA 59.312 55.000 0.00 0.00 0.00 1.85
200 201 1.833787 GCGGTTCTGGTGGGGACTAA 61.834 60.000 0.00 0.00 0.00 2.24
201 202 2.288025 GCGGTTCTGGTGGGGACTA 61.288 63.158 0.00 0.00 0.00 2.59
202 203 3.637273 GCGGTTCTGGTGGGGACT 61.637 66.667 0.00 0.00 0.00 3.85
203 204 4.717313 GGCGGTTCTGGTGGGGAC 62.717 72.222 0.00 0.00 0.00 4.46
206 207 2.119484 TTAGTGGCGGTTCTGGTGGG 62.119 60.000 0.00 0.00 0.00 4.61
207 208 0.250553 TTTAGTGGCGGTTCTGGTGG 60.251 55.000 0.00 0.00 0.00 4.61
208 209 1.156736 CTTTAGTGGCGGTTCTGGTG 58.843 55.000 0.00 0.00 0.00 4.17
209 210 0.036306 CCTTTAGTGGCGGTTCTGGT 59.964 55.000 0.00 0.00 0.00 4.00
210 211 0.676782 CCCTTTAGTGGCGGTTCTGG 60.677 60.000 0.00 0.00 0.00 3.86
211 212 1.305930 GCCCTTTAGTGGCGGTTCTG 61.306 60.000 0.00 0.00 39.48 3.02
212 213 1.002502 GCCCTTTAGTGGCGGTTCT 60.003 57.895 0.00 0.00 39.48 3.01
213 214 3.587095 GCCCTTTAGTGGCGGTTC 58.413 61.111 0.00 0.00 39.48 3.62
219 220 2.353323 GTTCGTAAGGCCCTTTAGTGG 58.647 52.381 0.00 0.00 38.47 4.00
220 221 2.353323 GGTTCGTAAGGCCCTTTAGTG 58.647 52.381 0.00 0.00 38.47 2.74
221 222 1.066645 CGGTTCGTAAGGCCCTTTAGT 60.067 52.381 0.00 0.00 38.47 2.24
222 223 1.648504 CGGTTCGTAAGGCCCTTTAG 58.351 55.000 0.00 0.00 38.47 1.85
223 224 0.249955 CCGGTTCGTAAGGCCCTTTA 59.750 55.000 0.00 0.00 38.47 1.85
224 225 1.002990 CCGGTTCGTAAGGCCCTTT 60.003 57.895 0.00 0.00 38.47 3.11
225 226 1.914764 TCCGGTTCGTAAGGCCCTT 60.915 57.895 0.00 0.00 38.47 3.95
226 227 2.284112 TCCGGTTCGTAAGGCCCT 60.284 61.111 0.00 0.00 38.47 5.19
227 228 2.125391 GTCCGGTTCGTAAGGCCC 60.125 66.667 0.00 0.00 38.47 5.80
228 229 2.125391 GGTCCGGTTCGTAAGGCC 60.125 66.667 0.00 0.00 38.47 5.19
229 230 0.392060 AATGGTCCGGTTCGTAAGGC 60.392 55.000 0.00 0.00 38.47 4.35
230 231 1.735571 CAAATGGTCCGGTTCGTAAGG 59.264 52.381 0.00 0.00 38.47 2.69
231 232 2.419667 ACAAATGGTCCGGTTCGTAAG 58.580 47.619 0.00 0.00 0.00 2.34
232 233 2.547299 ACAAATGGTCCGGTTCGTAA 57.453 45.000 0.00 0.00 0.00 3.18
233 234 2.547299 AACAAATGGTCCGGTTCGTA 57.453 45.000 0.00 0.00 0.00 3.43
234 235 2.547299 TAACAAATGGTCCGGTTCGT 57.453 45.000 0.00 0.00 0.00 3.85
235 236 2.745281 ACATAACAAATGGTCCGGTTCG 59.255 45.455 0.00 0.00 0.00 3.95
236 237 4.007659 AGACATAACAAATGGTCCGGTTC 58.992 43.478 0.00 0.00 0.00 3.62
237 238 4.028993 AGACATAACAAATGGTCCGGTT 57.971 40.909 0.00 0.00 0.00 4.44
238 239 3.713826 AGACATAACAAATGGTCCGGT 57.286 42.857 0.00 0.00 0.00 5.28
239 240 4.766375 AGTAGACATAACAAATGGTCCGG 58.234 43.478 0.00 0.00 0.00 5.14
240 241 6.370442 TCAAAGTAGACATAACAAATGGTCCG 59.630 38.462 0.00 0.00 0.00 4.79
429 431 9.688592 GATAATATGCCTTTTTCATTTCCTCTG 57.311 33.333 0.00 0.00 0.00 3.35
455 459 5.059833 GCAGTCCCTTATACATCTTCCTTG 58.940 45.833 0.00 0.00 0.00 3.61
490 494 3.542969 ATTTAGGGGAGGTTTGCAAGT 57.457 42.857 0.00 0.00 0.00 3.16
538 546 4.021016 CCAACAAATCCCGATAAAAACCCA 60.021 41.667 0.00 0.00 0.00 4.51
540 548 5.184287 TCTCCAACAAATCCCGATAAAAACC 59.816 40.000 0.00 0.00 0.00 3.27
549 558 1.672881 GAGCATCTCCAACAAATCCCG 59.327 52.381 0.00 0.00 0.00 5.14
767 786 9.588096 AGGTTTTATGTAGAACAGAAAATCCTT 57.412 29.630 15.69 1.13 46.08 3.36
769 788 9.010029 TCAGGTTTTATGTAGAACAGAAAATCC 57.990 33.333 15.69 15.68 46.08 3.01
842 863 4.142425 CCGTTTCCTTCTGTACTCCTACTC 60.142 50.000 0.00 0.00 0.00 2.59
843 864 3.762823 CCGTTTCCTTCTGTACTCCTACT 59.237 47.826 0.00 0.00 0.00 2.57
849 870 2.826725 CTCCTCCGTTTCCTTCTGTACT 59.173 50.000 0.00 0.00 0.00 2.73
850 871 2.094130 CCTCCTCCGTTTCCTTCTGTAC 60.094 54.545 0.00 0.00 0.00 2.90
851 872 2.176889 CCTCCTCCGTTTCCTTCTGTA 58.823 52.381 0.00 0.00 0.00 2.74
852 873 0.977395 CCTCCTCCGTTTCCTTCTGT 59.023 55.000 0.00 0.00 0.00 3.41
853 874 0.977395 ACCTCCTCCGTTTCCTTCTG 59.023 55.000 0.00 0.00 0.00 3.02
874 895 1.921230 GATTTCCGAGTCAGCGAAGAC 59.079 52.381 0.00 0.00 38.81 3.01
927 948 4.335584 GATCCTCGCCTCGCCTCG 62.336 72.222 0.00 0.00 0.00 4.63
964 985 4.271816 CCGATCCTCGCCTCACCG 62.272 72.222 0.00 0.00 38.82 4.94
1217 1238 1.135373 TCTTTCGTCTCATCAGCGGTC 60.135 52.381 0.00 0.00 0.00 4.79
1268 1289 4.588528 AGATCATACAGCTCCTCTTTCCTC 59.411 45.833 0.00 0.00 0.00 3.71
1373 1394 3.569194 TTTGGTGTAGGCTTGACTTGA 57.431 42.857 0.00 0.00 0.00 3.02
1418 1439 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1419 1440 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1430 1543 5.867903 AAGAGAGAGAGAGAGAGAGAGAG 57.132 47.826 0.00 0.00 0.00 3.20
1434 1547 5.614308 TGCATAAGAGAGAGAGAGAGAGAG 58.386 45.833 0.00 0.00 0.00 3.20
1451 1564 0.174617 TGACACGATCGCCTGCATAA 59.825 50.000 16.60 0.00 0.00 1.90
1465 1578 1.512926 AGGTTGTTGCTCGATGACAC 58.487 50.000 0.00 0.00 0.00 3.67
1489 1602 1.014185 CGCCGTACGCACGTAATTG 60.014 57.895 10.49 0.00 46.96 2.32
1610 4172 6.442112 TCTATGATTAGAGATGTTGACGCTG 58.558 40.000 0.00 0.00 30.79 5.18
1768 4462 7.705325 ACGTAGACGAATCTTAAAAGCATACAT 59.295 33.333 9.41 0.00 43.02 2.29
1814 4508 2.933260 GCTTTTGCCTCCGTTTCAAAAA 59.067 40.909 0.00 0.00 38.65 1.94
1815 4509 2.545731 GCTTTTGCCTCCGTTTCAAAA 58.454 42.857 0.00 0.00 40.15 2.44
1816 4510 2.217429 GCTTTTGCCTCCGTTTCAAA 57.783 45.000 0.00 0.00 40.15 2.69
1833 4527 9.911788 TCTTTATTAATGAGATGAGGAAAAGCT 57.088 29.630 0.00 0.00 0.00 3.74
1854 4548 8.651589 TTGAGACCTGATTACTCTCTTCTTTA 57.348 34.615 0.00 0.00 33.00 1.85
1856 4550 6.951198 TCTTGAGACCTGATTACTCTCTTCTT 59.049 38.462 0.00 0.00 33.00 2.52
1857 4551 6.489603 TCTTGAGACCTGATTACTCTCTTCT 58.510 40.000 0.00 0.00 33.00 2.85
1858 4552 6.183360 CCTCTTGAGACCTGATTACTCTCTTC 60.183 46.154 0.00 0.00 33.00 2.87
1861 4555 4.340950 CCCTCTTGAGACCTGATTACTCTC 59.659 50.000 0.00 0.00 0.00 3.20
1862 4556 4.264623 ACCCTCTTGAGACCTGATTACTCT 60.265 45.833 0.00 0.00 0.00 3.24
1863 4557 4.027437 ACCCTCTTGAGACCTGATTACTC 58.973 47.826 0.00 0.00 0.00 2.59
1865 4559 3.769844 TGACCCTCTTGAGACCTGATTAC 59.230 47.826 0.00 0.00 0.00 1.89
1866 4560 4.061131 TGACCCTCTTGAGACCTGATTA 57.939 45.455 0.00 0.00 0.00 1.75
1868 4562 2.630889 TGACCCTCTTGAGACCTGAT 57.369 50.000 0.00 0.00 0.00 2.90
1869 4563 2.630889 ATGACCCTCTTGAGACCTGA 57.369 50.000 0.00 0.00 0.00 3.86
1870 4564 3.772025 AGTAATGACCCTCTTGAGACCTG 59.228 47.826 0.00 0.00 0.00 4.00
1871 4565 4.027437 GAGTAATGACCCTCTTGAGACCT 58.973 47.826 0.00 0.00 0.00 3.85
1872 4566 3.133183 GGAGTAATGACCCTCTTGAGACC 59.867 52.174 0.00 0.00 0.00 3.85
1873 4567 4.027437 AGGAGTAATGACCCTCTTGAGAC 58.973 47.826 0.00 0.00 0.00 3.36
1874 4568 4.282496 GAGGAGTAATGACCCTCTTGAGA 58.718 47.826 9.46 0.00 38.78 3.27
1875 4569 3.386402 GGAGGAGTAATGACCCTCTTGAG 59.614 52.174 14.23 0.00 40.35 3.02
1876 4570 3.245984 TGGAGGAGTAATGACCCTCTTGA 60.246 47.826 14.23 1.50 40.35 3.02
1878 4572 3.108376 GTGGAGGAGTAATGACCCTCTT 58.892 50.000 14.23 0.00 40.35 2.85
1880 4574 2.467880 TGTGGAGGAGTAATGACCCTC 58.532 52.381 8.55 8.55 40.04 4.30
1881 4575 2.642171 TGTGGAGGAGTAATGACCCT 57.358 50.000 0.00 0.00 0.00 4.34
1882 4576 3.713826 TTTGTGGAGGAGTAATGACCC 57.286 47.619 0.00 0.00 0.00 4.46
1883 4577 4.843728 TCATTTGTGGAGGAGTAATGACC 58.156 43.478 0.00 0.00 32.10 4.02
1885 4579 6.778821 TCTTTCATTTGTGGAGGAGTAATGA 58.221 36.000 0.00 0.00 34.44 2.57
1886 4580 7.452880 TTCTTTCATTTGTGGAGGAGTAATG 57.547 36.000 0.00 0.00 0.00 1.90
1887 4581 8.477419 TTTTCTTTCATTTGTGGAGGAGTAAT 57.523 30.769 0.00 0.00 0.00 1.89
1888 4582 7.889873 TTTTCTTTCATTTGTGGAGGAGTAA 57.110 32.000 0.00 0.00 0.00 2.24
1892 5100 7.094205 GCTCTATTTTCTTTCATTTGTGGAGGA 60.094 37.037 0.00 0.00 0.00 3.71
1896 5104 8.734386 AGTAGCTCTATTTTCTTTCATTTGTGG 58.266 33.333 0.00 0.00 0.00 4.17
1901 5109 7.223777 GCGAGAGTAGCTCTATTTTCTTTCATT 59.776 37.037 0.00 0.00 41.35 2.57
1904 5112 5.172411 CGCGAGAGTAGCTCTATTTTCTTTC 59.828 44.000 0.00 0.00 41.35 2.62
1908 5116 2.722116 GCGCGAGAGTAGCTCTATTTTC 59.278 50.000 12.10 0.00 41.35 2.29
1912 5120 0.535328 TGGCGCGAGAGTAGCTCTAT 60.535 55.000 12.10 0.00 41.35 1.98
1915 5123 1.371145 GATGGCGCGAGAGTAGCTC 60.371 63.158 12.10 0.00 40.38 4.09
1917 5125 0.598680 ATTGATGGCGCGAGAGTAGC 60.599 55.000 12.10 0.00 36.44 3.58
1919 5127 0.744281 TCATTGATGGCGCGAGAGTA 59.256 50.000 12.10 0.00 0.00 2.59
1921 5129 0.788995 GATCATTGATGGCGCGAGAG 59.211 55.000 12.10 0.00 0.00 3.20
1922 5130 0.601046 GGATCATTGATGGCGCGAGA 60.601 55.000 12.10 0.00 0.00 4.04
1923 5131 1.572085 GGGATCATTGATGGCGCGAG 61.572 60.000 12.10 0.00 0.00 5.03
1924 5132 1.597854 GGGATCATTGATGGCGCGA 60.598 57.895 12.10 0.00 0.00 5.87
1925 5133 1.446516 TTGGGATCATTGATGGCGCG 61.447 55.000 0.00 0.00 0.00 6.86
1926 5134 0.746063 TTTGGGATCATTGATGGCGC 59.254 50.000 3.32 0.00 0.00 6.53
1927 5135 2.363038 ACATTTGGGATCATTGATGGCG 59.637 45.455 3.32 0.00 0.00 5.69
1928 5136 4.411256 AACATTTGGGATCATTGATGGC 57.589 40.909 3.32 0.00 0.00 4.40
1929 5137 5.987347 GCTAAACATTTGGGATCATTGATGG 59.013 40.000 3.32 0.00 0.00 3.51
1930 5138 5.987347 GGCTAAACATTTGGGATCATTGATG 59.013 40.000 3.32 0.00 0.00 3.07
1931 5139 5.070847 GGGCTAAACATTTGGGATCATTGAT 59.929 40.000 0.00 0.00 0.00 2.57
1932 5140 4.405358 GGGCTAAACATTTGGGATCATTGA 59.595 41.667 0.00 0.00 0.00 2.57
1933 5141 4.443315 GGGGCTAAACATTTGGGATCATTG 60.443 45.833 0.00 0.00 0.00 2.82
1934 5142 3.711190 GGGGCTAAACATTTGGGATCATT 59.289 43.478 0.00 0.00 0.00 2.57
1935 5143 3.308401 GGGGCTAAACATTTGGGATCAT 58.692 45.455 0.00 0.00 0.00 2.45
1936 5144 2.745968 GGGGCTAAACATTTGGGATCA 58.254 47.619 0.00 0.00 0.00 2.92
1937 5145 1.681264 CGGGGCTAAACATTTGGGATC 59.319 52.381 0.00 0.00 0.00 3.36
1938 5146 1.687996 CCGGGGCTAAACATTTGGGAT 60.688 52.381 0.00 0.00 0.00 3.85
1939 5147 0.323908 CCGGGGCTAAACATTTGGGA 60.324 55.000 0.00 0.00 0.00 4.37
1940 5148 1.955495 GCCGGGGCTAAACATTTGGG 61.955 60.000 2.18 0.00 38.26 4.12
1941 5149 1.515487 GCCGGGGCTAAACATTTGG 59.485 57.895 2.18 0.00 38.26 3.28
1942 5150 1.254284 TGGCCGGGGCTAAACATTTG 61.254 55.000 22.12 0.00 41.60 2.32
1943 5151 0.543174 TTGGCCGGGGCTAAACATTT 60.543 50.000 22.12 0.00 38.61 2.32
1944 5152 0.970427 CTTGGCCGGGGCTAAACATT 60.970 55.000 22.12 0.00 40.89 2.71
1945 5153 1.379843 CTTGGCCGGGGCTAAACAT 60.380 57.895 22.12 0.00 40.89 2.71
1946 5154 2.034999 CTTGGCCGGGGCTAAACA 59.965 61.111 22.12 0.00 40.89 2.83
1947 5155 3.449227 GCTTGGCCGGGGCTAAAC 61.449 66.667 22.12 3.48 40.89 2.01
1948 5156 4.751820 GGCTTGGCCGGGGCTAAA 62.752 66.667 22.12 7.65 40.89 1.85
1967 5175 5.349543 GCATCAAAGTAGAGGCCAAAAATTG 59.650 40.000 5.01 3.06 39.25 2.32
1968 5176 5.482006 GCATCAAAGTAGAGGCCAAAAATT 58.518 37.500 5.01 0.00 39.25 1.82
1969 5177 5.077134 GCATCAAAGTAGAGGCCAAAAAT 57.923 39.130 5.01 0.00 39.25 1.82
1970 5178 4.519540 GCATCAAAGTAGAGGCCAAAAA 57.480 40.909 5.01 0.00 39.25 1.94
1976 5184 1.440145 GCGGGCATCAAAGTAGAGGC 61.440 60.000 0.00 0.00 44.01 4.70
1977 5185 1.154205 CGCGGGCATCAAAGTAGAGG 61.154 60.000 0.00 0.00 0.00 3.69
1978 5186 0.179111 TCGCGGGCATCAAAGTAGAG 60.179 55.000 6.13 0.00 0.00 2.43
1979 5187 0.248012 TTCGCGGGCATCAAAGTAGA 59.752 50.000 6.13 0.00 0.00 2.59
1980 5188 0.373716 GTTCGCGGGCATCAAAGTAG 59.626 55.000 6.13 0.00 0.00 2.57
1981 5189 0.320858 TGTTCGCGGGCATCAAAGTA 60.321 50.000 6.13 0.00 0.00 2.24
1982 5190 1.599518 TGTTCGCGGGCATCAAAGT 60.600 52.632 6.13 0.00 0.00 2.66
1983 5191 1.154225 GTGTTCGCGGGCATCAAAG 60.154 57.895 6.13 0.00 0.00 2.77
1984 5192 1.851021 CTGTGTTCGCGGGCATCAAA 61.851 55.000 6.13 0.00 0.00 2.69
1985 5193 2.281139 TGTGTTCGCGGGCATCAA 60.281 55.556 6.13 0.00 0.00 2.57
1986 5194 2.741985 CTGTGTTCGCGGGCATCA 60.742 61.111 6.13 6.18 0.00 3.07
1987 5195 2.325082 AACTGTGTTCGCGGGCATC 61.325 57.895 6.13 1.89 0.00 3.91
1988 5196 2.281484 AACTGTGTTCGCGGGCAT 60.281 55.556 6.13 0.00 0.00 4.40
1989 5197 3.276091 CAACTGTGTTCGCGGGCA 61.276 61.111 6.13 2.29 0.00 5.36
1990 5198 2.830285 AACAACTGTGTTCGCGGGC 61.830 57.895 6.13 0.00 45.00 6.13
1991 5199 1.010125 CAACAACTGTGTTCGCGGG 60.010 57.895 6.13 0.00 45.00 6.13
1992 5200 1.010125 CCAACAACTGTGTTCGCGG 60.010 57.895 6.13 0.00 45.00 6.46
1993 5201 1.654137 GCCAACAACTGTGTTCGCG 60.654 57.895 0.00 0.00 45.00 5.87
1994 5202 4.302154 GCCAACAACTGTGTTCGC 57.698 55.556 0.00 0.00 45.00 4.70
1995 5203 2.805671 TCTATGCCAACAACTGTGTTCG 59.194 45.455 0.00 0.00 45.00 3.95
1996 5204 4.515191 TCTTCTATGCCAACAACTGTGTTC 59.485 41.667 0.00 0.00 45.00 3.18
1998 5206 4.085357 TCTTCTATGCCAACAACTGTGT 57.915 40.909 0.00 0.00 40.75 3.72
1999 5207 5.633830 AATCTTCTATGCCAACAACTGTG 57.366 39.130 0.00 0.00 0.00 3.66
2000 5208 6.006449 AGAAATCTTCTATGCCAACAACTGT 58.994 36.000 0.00 0.00 38.49 3.55
2001 5209 6.506500 AGAAATCTTCTATGCCAACAACTG 57.493 37.500 0.00 0.00 38.49 3.16
2002 5210 7.150783 GAAGAAATCTTCTATGCCAACAACT 57.849 36.000 14.45 0.00 46.59 3.16
2016 5224 5.067805 GTGTTGGTGTTCCAGAAGAAATCTT 59.932 40.000 0.00 0.00 45.22 2.40
2017 5225 4.580580 GTGTTGGTGTTCCAGAAGAAATCT 59.419 41.667 0.00 0.00 45.22 2.40
2018 5226 4.338118 TGTGTTGGTGTTCCAGAAGAAATC 59.662 41.667 0.00 0.00 45.22 2.17
2019 5227 4.277476 TGTGTTGGTGTTCCAGAAGAAAT 58.723 39.130 0.00 0.00 45.22 2.17
2020 5228 3.691575 TGTGTTGGTGTTCCAGAAGAAA 58.308 40.909 0.00 0.00 45.22 2.52
2021 5229 3.358111 TGTGTTGGTGTTCCAGAAGAA 57.642 42.857 0.00 0.00 45.22 2.52
2022 5230 3.576078 ATGTGTTGGTGTTCCAGAAGA 57.424 42.857 0.00 0.00 45.22 2.87
2023 5231 4.339247 AGAAATGTGTTGGTGTTCCAGAAG 59.661 41.667 0.00 0.00 45.22 2.85
2024 5232 4.277476 AGAAATGTGTTGGTGTTCCAGAA 58.723 39.130 0.00 0.00 45.22 3.02
2025 5233 3.882888 GAGAAATGTGTTGGTGTTCCAGA 59.117 43.478 0.00 0.00 45.22 3.86
2026 5234 3.885297 AGAGAAATGTGTTGGTGTTCCAG 59.115 43.478 0.00 0.00 45.22 3.86
2027 5235 3.882888 GAGAGAAATGTGTTGGTGTTCCA 59.117 43.478 0.00 0.00 42.66 3.53
2028 5236 4.137543 AGAGAGAAATGTGTTGGTGTTCC 58.862 43.478 0.00 0.00 0.00 3.62
2029 5237 5.757850 AAGAGAGAAATGTGTTGGTGTTC 57.242 39.130 0.00 0.00 0.00 3.18
2030 5238 5.067805 GGAAAGAGAGAAATGTGTTGGTGTT 59.932 40.000 0.00 0.00 0.00 3.32
2031 5239 4.580580 GGAAAGAGAGAAATGTGTTGGTGT 59.419 41.667 0.00 0.00 0.00 4.16
2032 5240 4.580167 TGGAAAGAGAGAAATGTGTTGGTG 59.420 41.667 0.00 0.00 0.00 4.17
2033 5241 4.792068 TGGAAAGAGAGAAATGTGTTGGT 58.208 39.130 0.00 0.00 0.00 3.67
2034 5242 5.772825 TTGGAAAGAGAGAAATGTGTTGG 57.227 39.130 0.00 0.00 0.00 3.77
2035 5243 5.979517 GGTTTGGAAAGAGAGAAATGTGTTG 59.020 40.000 0.00 0.00 0.00 3.33
2036 5244 5.893824 AGGTTTGGAAAGAGAGAAATGTGTT 59.106 36.000 0.00 0.00 0.00 3.32
2037 5245 5.449553 AGGTTTGGAAAGAGAGAAATGTGT 58.550 37.500 0.00 0.00 0.00 3.72
2038 5246 5.048434 GGAGGTTTGGAAAGAGAGAAATGTG 60.048 44.000 0.00 0.00 0.00 3.21
2039 5247 5.073428 GGAGGTTTGGAAAGAGAGAAATGT 58.927 41.667 0.00 0.00 0.00 2.71
2040 5248 4.154918 CGGAGGTTTGGAAAGAGAGAAATG 59.845 45.833 0.00 0.00 0.00 2.32
2041 5249 4.041691 TCGGAGGTTTGGAAAGAGAGAAAT 59.958 41.667 0.00 0.00 0.00 2.17
2042 5250 3.389983 TCGGAGGTTTGGAAAGAGAGAAA 59.610 43.478 0.00 0.00 0.00 2.52
2043 5251 2.969950 TCGGAGGTTTGGAAAGAGAGAA 59.030 45.455 0.00 0.00 0.00 2.87
2044 5252 2.563179 CTCGGAGGTTTGGAAAGAGAGA 59.437 50.000 0.00 0.00 0.00 3.10
2045 5253 2.354203 CCTCGGAGGTTTGGAAAGAGAG 60.354 54.545 16.15 0.00 0.00 3.20
2046 5254 1.623811 CCTCGGAGGTTTGGAAAGAGA 59.376 52.381 16.15 0.00 0.00 3.10
2047 5255 1.623811 TCCTCGGAGGTTTGGAAAGAG 59.376 52.381 22.88 0.00 36.53 2.85
2048 5256 1.724545 TCCTCGGAGGTTTGGAAAGA 58.275 50.000 22.88 0.00 36.53 2.52
2049 5257 2.789409 ATCCTCGGAGGTTTGGAAAG 57.211 50.000 22.88 0.00 36.53 2.62
2050 5258 2.907696 TGTATCCTCGGAGGTTTGGAAA 59.092 45.455 22.88 2.84 36.53 3.13
2051 5259 2.542550 TGTATCCTCGGAGGTTTGGAA 58.457 47.619 22.88 3.59 36.53 3.53
2052 5260 2.241281 TGTATCCTCGGAGGTTTGGA 57.759 50.000 22.88 4.64 36.53 3.53
2053 5261 2.906354 CTTGTATCCTCGGAGGTTTGG 58.094 52.381 22.88 6.95 36.53 3.28
2054 5262 2.280628 GCTTGTATCCTCGGAGGTTTG 58.719 52.381 22.88 10.00 36.53 2.93
2055 5263 1.134788 CGCTTGTATCCTCGGAGGTTT 60.135 52.381 22.88 14.28 36.53 3.27
2056 5264 0.460311 CGCTTGTATCCTCGGAGGTT 59.540 55.000 22.88 17.30 36.53 3.50
2057 5265 0.395311 TCGCTTGTATCCTCGGAGGT 60.395 55.000 22.88 13.05 36.53 3.85
2058 5266 0.962489 ATCGCTTGTATCCTCGGAGG 59.038 55.000 18.25 18.25 36.46 4.30
2059 5267 5.124138 ACTTATATCGCTTGTATCCTCGGAG 59.876 44.000 0.00 0.00 0.00 4.63
2060 5268 5.008331 ACTTATATCGCTTGTATCCTCGGA 58.992 41.667 0.00 0.00 0.00 4.55
2061 5269 5.096169 CACTTATATCGCTTGTATCCTCGG 58.904 45.833 0.00 0.00 0.00 4.63
2062 5270 5.939457 TCACTTATATCGCTTGTATCCTCG 58.061 41.667 0.00 0.00 0.00 4.63
2063 5271 6.151312 TCCTCACTTATATCGCTTGTATCCTC 59.849 42.308 0.00 0.00 0.00 3.71
2064 5272 6.010850 TCCTCACTTATATCGCTTGTATCCT 58.989 40.000 0.00 0.00 0.00 3.24
2065 5273 6.268825 TCCTCACTTATATCGCTTGTATCC 57.731 41.667 0.00 0.00 0.00 2.59
2066 5274 9.457110 CATATCCTCACTTATATCGCTTGTATC 57.543 37.037 0.00 0.00 0.00 2.24
2067 5275 8.417106 CCATATCCTCACTTATATCGCTTGTAT 58.583 37.037 0.00 0.00 0.00 2.29
2068 5276 7.630728 GCCATATCCTCACTTATATCGCTTGTA 60.631 40.741 0.00 0.00 0.00 2.41
2069 5277 6.634805 CCATATCCTCACTTATATCGCTTGT 58.365 40.000 0.00 0.00 0.00 3.16
2070 5278 5.521735 GCCATATCCTCACTTATATCGCTTG 59.478 44.000 0.00 0.00 0.00 4.01
2071 5279 5.423610 AGCCATATCCTCACTTATATCGCTT 59.576 40.000 0.00 0.00 31.17 4.68
2072 5280 4.959210 AGCCATATCCTCACTTATATCGCT 59.041 41.667 0.00 0.00 30.62 4.93
2073 5281 5.269505 AGCCATATCCTCACTTATATCGC 57.730 43.478 0.00 0.00 0.00 4.58
2074 5282 8.037758 AGAAAAGCCATATCCTCACTTATATCG 58.962 37.037 0.00 0.00 0.00 2.92
2075 5283 9.377312 GAGAAAAGCCATATCCTCACTTATATC 57.623 37.037 0.00 0.00 0.00 1.63
2076 5284 8.325046 GGAGAAAAGCCATATCCTCACTTATAT 58.675 37.037 0.00 0.00 0.00 0.86
2077 5285 7.525526 CGGAGAAAAGCCATATCCTCACTTATA 60.526 40.741 0.00 0.00 0.00 0.98
2078 5286 6.538263 GGAGAAAAGCCATATCCTCACTTAT 58.462 40.000 0.00 0.00 0.00 1.73
2079 5287 5.453339 CGGAGAAAAGCCATATCCTCACTTA 60.453 44.000 0.00 0.00 0.00 2.24
2080 5288 4.684485 CGGAGAAAAGCCATATCCTCACTT 60.684 45.833 0.00 0.00 0.00 3.16
2081 5289 3.181461 CGGAGAAAAGCCATATCCTCACT 60.181 47.826 0.00 0.00 0.00 3.41
2082 5290 3.134458 CGGAGAAAAGCCATATCCTCAC 58.866 50.000 0.00 0.00 0.00 3.51
2083 5291 2.104792 CCGGAGAAAAGCCATATCCTCA 59.895 50.000 0.00 0.00 0.00 3.86
2084 5292 2.104963 ACCGGAGAAAAGCCATATCCTC 59.895 50.000 9.46 0.00 0.00 3.71
2085 5293 2.127708 ACCGGAGAAAAGCCATATCCT 58.872 47.619 9.46 0.00 0.00 3.24
2086 5294 2.222027 CACCGGAGAAAAGCCATATCC 58.778 52.381 9.46 0.00 0.00 2.59
2087 5295 1.604278 GCACCGGAGAAAAGCCATATC 59.396 52.381 9.46 0.00 0.00 1.63
2088 5296 1.680338 GCACCGGAGAAAAGCCATAT 58.320 50.000 9.46 0.00 0.00 1.78
2089 5297 0.393808 GGCACCGGAGAAAAGCCATA 60.394 55.000 9.46 0.00 44.59 2.74
2090 5298 1.678970 GGCACCGGAGAAAAGCCAT 60.679 57.895 9.46 0.00 44.59 4.40
2091 5299 2.282180 GGCACCGGAGAAAAGCCA 60.282 61.111 9.46 0.00 44.59 4.75
2092 5300 3.062466 GGGCACCGGAGAAAAGCC 61.062 66.667 9.46 11.24 40.86 4.35
2107 5315 4.363990 ACTGTGCTCGAGCGTGGG 62.364 66.667 30.75 21.70 45.83 4.61
2108 5316 2.807045 GACTGTGCTCGAGCGTGG 60.807 66.667 30.75 23.33 45.83 4.94
2109 5317 2.508755 TACGACTGTGCTCGAGCGTG 62.509 60.000 30.75 23.78 45.83 5.34
2110 5318 2.241885 CTACGACTGTGCTCGAGCGT 62.242 60.000 30.75 22.79 45.83 5.07
2111 5319 1.581402 CTACGACTGTGCTCGAGCG 60.581 63.158 30.75 19.71 45.83 5.03
2112 5320 1.870016 GCTACGACTGTGCTCGAGC 60.870 63.158 30.42 30.42 42.50 5.03
2113 5321 1.226435 GGCTACGACTGTGCTCGAG 60.226 63.158 8.45 8.45 37.11 4.04
2114 5322 2.697761 GGGCTACGACTGTGCTCGA 61.698 63.158 0.00 0.00 37.11 4.04
2115 5323 2.202623 GGGCTACGACTGTGCTCG 60.203 66.667 0.00 0.00 39.68 5.03
2121 5329 1.215647 GAGTGGTGGGCTACGACTG 59.784 63.158 22.34 0.00 46.63 3.51
2124 5332 1.982395 CAGGAGTGGTGGGCTACGA 60.982 63.158 0.00 0.00 0.00 3.43
2126 5334 1.612442 TCCAGGAGTGGTGGGCTAC 60.612 63.158 0.00 0.00 45.28 3.58
2129 5337 4.035102 GGTCCAGGAGTGGTGGGC 62.035 72.222 0.00 0.00 45.28 5.36
2130 5338 3.706373 CGGTCCAGGAGTGGTGGG 61.706 72.222 0.00 0.00 45.28 4.61
2131 5339 2.516888 AACGGTCCAGGAGTGGTGG 61.517 63.158 0.00 0.00 45.28 4.61
2132 5340 1.301716 CAACGGTCCAGGAGTGGTG 60.302 63.158 0.00 0.00 45.28 4.17
2137 5345 1.522569 GATCCCAACGGTCCAGGAG 59.477 63.158 0.00 0.00 0.00 3.69
2138 5346 1.993391 GGATCCCAACGGTCCAGGA 60.993 63.158 0.00 0.00 32.50 3.86
2139 5347 2.590092 GGATCCCAACGGTCCAGG 59.410 66.667 0.00 0.00 32.50 4.45
2142 5350 2.253403 GACAGGGATCCCAACGGTCC 62.253 65.000 32.69 13.75 38.92 4.46
2147 5355 0.681243 GCTTGGACAGGGATCCCAAC 60.681 60.000 32.69 21.01 38.06 3.77
2148 5356 1.691219 GCTTGGACAGGGATCCCAA 59.309 57.895 32.69 16.33 38.06 4.12
2149 5357 2.669133 CGCTTGGACAGGGATCCCA 61.669 63.158 32.69 8.81 38.06 4.37
2150 5358 2.190578 CGCTTGGACAGGGATCCC 59.809 66.667 24.59 24.59 38.06 3.85
2151 5359 2.190578 CCGCTTGGACAGGGATCC 59.809 66.667 1.92 1.92 37.67 3.36
2152 5360 2.514824 GCCGCTTGGACAGGGATC 60.515 66.667 0.00 0.00 37.67 3.36
2159 5730 3.050275 GGACACTGCCGCTTGGAC 61.050 66.667 0.00 0.00 33.02 4.02
2160 5731 3.535629 CTGGACACTGCCGCTTGGA 62.536 63.158 0.00 0.00 33.02 3.53
2164 5735 4.385405 GAGCTGGACACTGCCGCT 62.385 66.667 0.00 0.00 41.92 5.52
2168 5739 2.745492 GCCTGAGCTGGACACTGC 60.745 66.667 0.00 0.00 41.36 4.40
2171 5742 3.965539 ATGCGCCTGAGCTGGACAC 62.966 63.158 4.18 0.00 38.13 3.67
2173 5744 2.894387 GATGCGCCTGAGCTGGAC 60.894 66.667 4.18 0.00 38.13 4.02
2174 5745 4.166888 GGATGCGCCTGAGCTGGA 62.167 66.667 4.18 0.00 38.13 3.86
2175 5746 4.478371 TGGATGCGCCTGAGCTGG 62.478 66.667 4.18 0.00 37.63 4.85
2176 5747 2.895865 CTGGATGCGCCTGAGCTG 60.896 66.667 4.18 0.00 37.79 4.24
2177 5748 4.853050 GCTGGATGCGCCTGAGCT 62.853 66.667 4.18 0.00 37.79 4.09
2184 5755 2.056481 GAGATGTTGGCTGGATGCGC 62.056 60.000 0.00 0.00 44.05 6.09
2186 5757 0.737219 GTGAGATGTTGGCTGGATGC 59.263 55.000 0.00 0.00 41.94 3.91
2187 5758 1.386533 GGTGAGATGTTGGCTGGATG 58.613 55.000 0.00 0.00 0.00 3.51
2188 5759 0.107508 CGGTGAGATGTTGGCTGGAT 60.108 55.000 0.00 0.00 0.00 3.41
2189 5760 1.296392 CGGTGAGATGTTGGCTGGA 59.704 57.895 0.00 0.00 0.00 3.86
2191 5762 2.743752 CGCGGTGAGATGTTGGCTG 61.744 63.158 0.00 0.00 0.00 4.85
2192 5763 2.434884 CGCGGTGAGATGTTGGCT 60.435 61.111 0.00 0.00 0.00 4.75
2194 5765 1.635663 GGAACGCGGTGAGATGTTGG 61.636 60.000 12.47 0.00 0.00 3.77
2195 5766 0.948623 TGGAACGCGGTGAGATGTTG 60.949 55.000 12.47 0.00 0.00 3.33
2196 5767 0.036388 ATGGAACGCGGTGAGATGTT 60.036 50.000 12.47 0.00 0.00 2.71
2198 5769 1.794701 CATATGGAACGCGGTGAGATG 59.205 52.381 12.47 1.57 0.00 2.90
2200 5771 0.529773 GCATATGGAACGCGGTGAGA 60.530 55.000 12.47 0.00 0.00 3.27
2203 5774 2.625906 CGCATATGGAACGCGGTG 59.374 61.111 12.47 0.00 45.08 4.94
2207 5778 0.531090 TACACCCGCATATGGAACGC 60.531 55.000 4.56 0.00 0.00 4.84
2208 5779 1.497991 CTACACCCGCATATGGAACG 58.502 55.000 4.56 0.00 0.00 3.95
2209 5780 1.414919 TCCTACACCCGCATATGGAAC 59.585 52.381 4.56 0.00 0.00 3.62
2210 5781 1.796017 TCCTACACCCGCATATGGAA 58.204 50.000 4.56 0.00 0.00 3.53
2212 5783 1.691976 TCTTCCTACACCCGCATATGG 59.308 52.381 4.56 0.00 0.00 2.74
2215 5786 2.417651 CGTTTCTTCCTACACCCGCATA 60.418 50.000 0.00 0.00 0.00 3.14
2217 5788 0.320073 CGTTTCTTCCTACACCCGCA 60.320 55.000 0.00 0.00 0.00 5.69
2219 5790 3.515330 ATACGTTTCTTCCTACACCCG 57.485 47.619 0.00 0.00 0.00 5.28
2220 5791 5.841957 TCTATACGTTTCTTCCTACACCC 57.158 43.478 0.00 0.00 0.00 4.61
2221 5792 7.542025 TCTTTCTATACGTTTCTTCCTACACC 58.458 38.462 0.00 0.00 0.00 4.16
2224 5818 7.701501 CCACTCTTTCTATACGTTTCTTCCTAC 59.298 40.741 0.00 0.00 0.00 3.18
2234 5828 5.243283 ACTCACAACCACTCTTTCTATACGT 59.757 40.000 0.00 0.00 0.00 3.57
2239 5833 3.552273 GCGACTCACAACCACTCTTTCTA 60.552 47.826 0.00 0.00 0.00 2.10
2252 5846 2.125952 CTGCGATGGCGACTCACA 60.126 61.111 0.00 0.00 44.10 3.58
2253 5847 2.887568 CCTGCGATGGCGACTCAC 60.888 66.667 0.00 0.00 44.10 3.51
2255 5849 2.125512 AACCTGCGATGGCGACTC 60.126 61.111 0.00 0.00 44.10 3.36
2305 5899 1.115467 ATCCTTCTCCTAGTGGCACG 58.885 55.000 12.71 0.00 0.00 5.34
2307 5901 2.392662 CTCATCCTTCTCCTAGTGGCA 58.607 52.381 0.00 0.00 0.00 4.92
2335 5929 0.321653 GCTTCCTCGTGTGAATGGGT 60.322 55.000 0.00 0.00 0.00 4.51
2336 5930 1.361668 CGCTTCCTCGTGTGAATGGG 61.362 60.000 0.00 0.00 0.00 4.00
2337 5931 1.970917 GCGCTTCCTCGTGTGAATGG 61.971 60.000 0.00 0.00 0.00 3.16
2342 5936 4.680237 TGGGCGCTTCCTCGTGTG 62.680 66.667 7.64 0.00 34.39 3.82
2344 5938 3.121030 CTTGGGCGCTTCCTCGTG 61.121 66.667 7.64 0.00 34.39 4.35
2347 5941 4.722700 TGGCTTGGGCGCTTCCTC 62.723 66.667 7.64 0.00 39.81 3.71
2370 5964 4.124970 GTTAAAACTCGTCCTCCACAGTT 58.875 43.478 0.00 0.00 31.52 3.16
2371 5965 3.493873 GGTTAAAACTCGTCCTCCACAGT 60.494 47.826 0.00 0.00 0.00 3.55
2372 5966 3.064931 GGTTAAAACTCGTCCTCCACAG 58.935 50.000 0.00 0.00 0.00 3.66
2382 5976 6.701432 ATCGACAAAGTAGGTTAAAACTCG 57.299 37.500 0.00 0.00 0.00 4.18
2385 5979 9.803130 GAAGTAATCGACAAAGTAGGTTAAAAC 57.197 33.333 0.00 0.00 0.00 2.43
2411 6005 3.185365 TGACGTAAGCATGCGGCG 61.185 61.111 22.78 22.78 46.78 6.46
2413 6007 2.695055 CGTGACGTAAGCATGCGG 59.305 61.111 13.01 5.81 45.62 5.69
2425 6019 2.125912 AGCCTCATCGTGCGTGAC 60.126 61.111 0.00 0.00 0.00 3.67
2428 6022 1.313091 TACAGAGCCTCATCGTGCGT 61.313 55.000 0.00 0.00 0.00 5.24
2433 6027 3.589988 ACAAAAGTACAGAGCCTCATCG 58.410 45.455 0.00 0.00 0.00 3.84


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.