Multiple sequence alignment - TraesCS7D01G166000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G166000 chr7D 100.000 5061 0 0 1 5061 116432157 116437217 0.000000e+00 9347
1 TraesCS7D01G166000 chr7D 94.151 530 29 2 846 1375 115822978 115823505 0.000000e+00 806
2 TraesCS7D01G166000 chr7D 89.863 582 34 6 625 1203 116051981 116052540 0.000000e+00 725
3 TraesCS7D01G166000 chr7D 83.227 787 96 14 1944 2709 115823998 115824769 0.000000e+00 689
4 TraesCS7D01G166000 chr7D 87.241 580 61 11 3550 4128 116091529 116092096 0.000000e+00 649
5 TraesCS7D01G166000 chr7D 86.874 579 66 8 3550 4127 115824983 115825552 1.540000e-179 640
6 TraesCS7D01G166000 chr7D 88.867 512 35 9 116 627 116051083 116051572 1.200000e-170 610
7 TraesCS7D01G166000 chr7D 85.424 542 68 8 2175 2709 116090778 116091315 2.060000e-153 553
8 TraesCS7D01G166000 chr7D 80.030 661 92 20 3468 4128 116355489 116356109 2.150000e-123 453
9 TraesCS7D01G166000 chr7D 79.764 593 103 12 3421 4012 115874495 115875071 1.010000e-111 414
10 TraesCS7D01G166000 chr7D 88.563 341 38 1 116 455 115821468 115821808 3.650000e-111 412
11 TraesCS7D01G166000 chr7D 84.352 409 38 14 4456 4842 393579472 393579876 1.330000e-100 377
12 TraesCS7D01G166000 chr7D 81.319 455 35 25 1345 1786 115823509 115823926 1.760000e-84 324
13 TraesCS7D01G166000 chr7D 94.681 188 8 2 666 852 115821899 115822085 1.780000e-74 291
14 TraesCS7D01G166000 chr7D 89.362 188 13 3 4876 5056 393579874 393580061 3.940000e-56 230
15 TraesCS7D01G166000 chr7D 87.742 155 17 1 1904 2058 116063801 116063953 4.030000e-41 180
16 TraesCS7D01G166000 chr7B 92.555 1773 74 22 2688 4418 75025695 75027451 0.000000e+00 2490
17 TraesCS7D01G166000 chr7B 96.434 701 22 3 2010 2709 75024820 75025518 0.000000e+00 1153
18 TraesCS7D01G166000 chr7B 93.146 642 24 6 4432 5061 75034942 75035575 0.000000e+00 924
19 TraesCS7D01G166000 chr7B 92.969 640 27 8 4432 5061 75027436 75028067 0.000000e+00 917
20 TraesCS7D01G166000 chr7B 94.973 557 13 2 684 1240 75023943 75024484 0.000000e+00 859
21 TraesCS7D01G166000 chr7B 83.946 598 50 18 4485 5061 393318560 393319132 9.650000e-147 531
22 TraesCS7D01G166000 chr7B 88.596 342 15 10 1262 1579 75024477 75024818 1.320000e-105 394
23 TraesCS7D01G166000 chr7B 84.433 379 45 10 3519 3897 74857152 74857516 1.340000e-95 361
24 TraesCS7D01G166000 chr7B 83.503 394 32 14 300 688 75023472 75023837 2.260000e-88 337
25 TraesCS7D01G166000 chr7B 87.013 231 28 2 3893 4123 74857667 74857895 5.030000e-65 259
26 TraesCS7D01G166000 chr7B 89.744 156 16 0 116 271 75023317 75023472 3.090000e-47 200
27 TraesCS7D01G166000 chr7A 89.841 1132 70 28 666 1786 120463474 120464571 0.000000e+00 1411
28 TraesCS7D01G166000 chr7A 88.354 893 65 15 3550 4418 120465633 120466510 0.000000e+00 1037
29 TraesCS7D01G166000 chr7A 94.322 634 24 4 4432 5061 120466495 120467120 0.000000e+00 961
30 TraesCS7D01G166000 chr7A 83.990 787 94 16 1944 2709 120464643 120465418 0.000000e+00 726
31 TraesCS7D01G166000 chr7A 85.965 627 54 13 806 1417 120217636 120218243 1.540000e-179 640
32 TraesCS7D01G166000 chr7A 84.603 617 74 13 3521 4128 120218591 120219195 1.210000e-165 593
33 TraesCS7D01G166000 chr7A 84.087 641 49 27 4456 5061 446325928 446326550 2.040000e-158 569
34 TraesCS7D01G166000 chr7A 88.922 334 34 2 116 449 120463041 120463371 4.720000e-110 409
35 TraesCS7D01G166000 chr4B 95.070 142 7 0 2710 2851 106047772 106047631 1.830000e-54 224
36 TraesCS7D01G166000 chrUn 93.878 147 7 2 2710 2856 48495390 48495534 2.370000e-53 220
37 TraesCS7D01G166000 chrUn 93.878 147 7 2 2710 2856 235110713 235110857 2.370000e-53 220
38 TraesCS7D01G166000 chrUn 93.878 147 7 2 2710 2856 386426376 386426520 2.370000e-53 220
39 TraesCS7D01G166000 chrUn 92.373 118 8 1 3 119 44243024 44242907 3.130000e-37 167
40 TraesCS7D01G166000 chrUn 92.373 118 8 1 3 119 44575879 44575996 3.130000e-37 167
41 TraesCS7D01G166000 chr6D 93.878 147 5 4 2705 2851 370848324 370848182 8.530000e-53 219
42 TraesCS7D01G166000 chr5A 93.878 147 6 3 2710 2856 439420942 439421085 8.530000e-53 219
43 TraesCS7D01G166000 chr6B 92.258 155 9 3 2691 2844 479844072 479844224 3.070000e-52 217
44 TraesCS7D01G166000 chr3B 92.208 154 11 1 2710 2862 520146384 520146231 3.070000e-52 217
45 TraesCS7D01G166000 chr5D 93.443 122 7 1 1 121 125486060 125486181 4.030000e-41 180
46 TraesCS7D01G166000 chr5D 91.667 120 9 1 1 119 299956404 299956523 1.130000e-36 165
47 TraesCS7D01G166000 chr5D 91.597 119 9 1 1 118 310486393 310486275 4.050000e-36 163
48 TraesCS7D01G166000 chr4D 93.333 120 7 1 1 119 34457935 34458054 5.210000e-40 176
49 TraesCS7D01G166000 chr2D 91.870 123 9 1 1 122 520543485 520543363 2.420000e-38 171
50 TraesCS7D01G166000 chr2D 90.323 124 10 2 1 123 192283589 192283467 1.460000e-35 161
51 TraesCS7D01G166000 chr3D 91.597 119 10 0 1 119 133285224 133285106 1.130000e-36 165


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G166000 chr7D 116432157 116437217 5060 False 9347.000000 9347 100.000000 1 5061 1 chr7D.!!$F4 5060
1 TraesCS7D01G166000 chr7D 116051083 116052540 1457 False 667.500000 725 89.365000 116 1203 2 chr7D.!!$F6 1087
2 TraesCS7D01G166000 chr7D 116090778 116092096 1318 False 601.000000 649 86.332500 2175 4128 2 chr7D.!!$F7 1953
3 TraesCS7D01G166000 chr7D 115821468 115825552 4084 False 527.000000 806 88.135833 116 4127 6 chr7D.!!$F5 4011
4 TraesCS7D01G166000 chr7D 116355489 116356109 620 False 453.000000 453 80.030000 3468 4128 1 chr7D.!!$F3 660
5 TraesCS7D01G166000 chr7D 115874495 115875071 576 False 414.000000 414 79.764000 3421 4012 1 chr7D.!!$F1 591
6 TraesCS7D01G166000 chr7D 393579472 393580061 589 False 303.500000 377 86.857000 4456 5056 2 chr7D.!!$F8 600
7 TraesCS7D01G166000 chr7B 75034942 75035575 633 False 924.000000 924 93.146000 4432 5061 1 chr7B.!!$F1 629
8 TraesCS7D01G166000 chr7B 75023317 75028067 4750 False 907.142857 2490 91.253429 116 5061 7 chr7B.!!$F4 4945
9 TraesCS7D01G166000 chr7B 393318560 393319132 572 False 531.000000 531 83.946000 4485 5061 1 chr7B.!!$F2 576
10 TraesCS7D01G166000 chr7B 74857152 74857895 743 False 310.000000 361 85.723000 3519 4123 2 chr7B.!!$F3 604
11 TraesCS7D01G166000 chr7A 120463041 120467120 4079 False 908.800000 1411 89.085800 116 5061 5 chr7A.!!$F3 4945
12 TraesCS7D01G166000 chr7A 120217636 120219195 1559 False 616.500000 640 85.284000 806 4128 2 chr7A.!!$F2 3322
13 TraesCS7D01G166000 chr7A 446325928 446326550 622 False 569.000000 569 84.087000 4456 5061 1 chr7A.!!$F1 605

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
31 32 0.318762 GCGTGGATGGGACCTAGATC 59.681 60.0 0.00 0.0 0.00 2.75 F
1877 3494 0.037326 TGAATTGCCTCTCGCGAAGT 60.037 50.0 11.33 0.0 42.08 3.01 F
1878 3495 0.647925 GAATTGCCTCTCGCGAAGTC 59.352 55.0 11.33 0.0 42.08 3.01 F
1943 3560 1.020437 GGCTTGTAGCATCAGGAAGC 58.980 55.0 0.67 0.0 44.75 3.86 F
3811 5696 0.736053 TGAACAACAGCCCAACGAAC 59.264 50.0 0.00 0.0 0.00 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1897 3514 0.177604 CAGCTGGCAACCAACCAAAA 59.822 50.000 5.57 0.0 36.56 2.44 R
3706 5581 1.139853 CCCTTGCGCTTCTTAGGAGAT 59.860 52.381 9.73 0.0 0.00 2.75 R
3779 5654 4.021544 GCTGTTGTTCATATCCCCAACAAA 60.022 41.667 10.24 0.0 44.49 2.83 R
3936 5984 5.126067 CAAGAGGTGGAGAAGAAAAGACAA 58.874 41.667 0.00 0.0 0.00 3.18 R
4669 6751 1.087501 GCTGGGTGTTAGCTACAAGC 58.912 55.000 0.00 0.0 42.84 4.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 4.802051 CACCTGGGGGCGTGGATG 62.802 72.222 0.00 0.00 35.63 3.51
27 28 2.766651 GGGCGTGGATGGGACCTA 60.767 66.667 0.00 0.00 0.00 3.08
28 29 2.808206 GGGCGTGGATGGGACCTAG 61.808 68.421 0.00 0.00 0.00 3.02
29 30 1.760875 GGCGTGGATGGGACCTAGA 60.761 63.158 0.00 0.00 0.00 2.43
30 31 1.122019 GGCGTGGATGGGACCTAGAT 61.122 60.000 0.00 0.00 0.00 1.98
31 32 0.318762 GCGTGGATGGGACCTAGATC 59.681 60.000 0.00 0.00 0.00 2.75
32 33 0.598562 CGTGGATGGGACCTAGATCG 59.401 60.000 0.00 0.00 0.00 3.69
33 34 0.318762 GTGGATGGGACCTAGATCGC 59.681 60.000 0.00 0.00 0.00 4.58
34 35 0.832135 TGGATGGGACCTAGATCGCC 60.832 60.000 0.00 0.00 0.00 5.54
35 36 1.545706 GGATGGGACCTAGATCGCCC 61.546 65.000 0.00 0.84 41.08 6.13
36 37 1.536662 ATGGGACCTAGATCGCCCC 60.537 63.158 0.00 0.00 39.93 5.80
37 38 2.923568 GGGACCTAGATCGCCCCC 60.924 72.222 0.00 0.00 34.39 5.40
38 39 2.122989 GGACCTAGATCGCCCCCA 60.123 66.667 0.00 0.00 0.00 4.96
39 40 2.210711 GGACCTAGATCGCCCCCAG 61.211 68.421 0.00 0.00 0.00 4.45
40 41 2.122813 ACCTAGATCGCCCCCAGG 60.123 66.667 0.00 0.00 0.00 4.45
50 51 3.520550 CCCCCAGGGCCTAAAACT 58.479 61.111 5.28 0.00 35.35 2.66
51 52 1.306633 CCCCCAGGGCCTAAAACTC 59.693 63.158 5.28 0.00 35.35 3.01
52 53 1.077716 CCCCAGGGCCTAAAACTCG 60.078 63.158 5.28 0.00 0.00 4.18
53 54 1.749258 CCCAGGGCCTAAAACTCGC 60.749 63.158 5.28 0.00 0.00 5.03
54 55 1.749258 CCAGGGCCTAAAACTCGCC 60.749 63.158 5.28 0.00 42.23 5.54
55 56 1.002624 CAGGGCCTAAAACTCGCCA 60.003 57.895 5.28 0.00 44.90 5.69
56 57 1.026718 CAGGGCCTAAAACTCGCCAG 61.027 60.000 5.28 0.00 44.90 4.85
57 58 1.749258 GGGCCTAAAACTCGCCAGG 60.749 63.158 0.84 0.00 44.90 4.45
58 59 3.188011 GCCTAAAACTCGCCAGGC 58.812 61.111 0.00 0.00 46.21 4.85
82 83 4.767255 CCGAAAGAGCGCAGGCCT 62.767 66.667 11.47 0.00 41.24 5.19
83 84 2.184322 CGAAAGAGCGCAGGCCTA 59.816 61.111 11.47 0.00 41.24 3.93
84 85 1.227380 CGAAAGAGCGCAGGCCTAT 60.227 57.895 11.47 0.00 41.24 2.57
85 86 1.493950 CGAAAGAGCGCAGGCCTATG 61.494 60.000 11.47 0.92 41.24 2.23
86 87 1.780025 GAAAGAGCGCAGGCCTATGC 61.780 60.000 18.31 18.31 42.95 3.14
93 94 4.943252 CAGGCCTATGCGCTGGGG 62.943 72.222 3.98 8.87 38.85 4.96
98 99 4.504596 CTATGCGCTGGGGGCCAA 62.505 66.667 9.73 0.00 40.86 4.52
99 100 4.053871 TATGCGCTGGGGGCCAAA 62.054 61.111 9.73 0.00 40.86 3.28
104 105 4.660938 GCTGGGGGCCAAACGAGT 62.661 66.667 4.39 0.00 30.80 4.18
105 106 2.672996 CTGGGGGCCAAACGAGTG 60.673 66.667 4.39 0.00 30.80 3.51
106 107 4.278513 TGGGGGCCAAACGAGTGG 62.279 66.667 4.39 4.96 42.05 4.00
107 108 3.961414 GGGGGCCAAACGAGTGGA 61.961 66.667 4.39 0.00 41.65 4.02
108 109 2.359975 GGGGCCAAACGAGTGGAG 60.360 66.667 4.39 0.00 41.65 3.86
109 110 2.747686 GGGCCAAACGAGTGGAGA 59.252 61.111 4.39 0.00 41.65 3.71
110 111 1.299976 GGGCCAAACGAGTGGAGAT 59.700 57.895 4.39 0.00 41.65 2.75
111 112 1.026718 GGGCCAAACGAGTGGAGATG 61.027 60.000 4.39 0.00 41.65 2.90
112 113 1.648467 GGCCAAACGAGTGGAGATGC 61.648 60.000 12.44 0.00 41.65 3.91
113 114 0.674895 GCCAAACGAGTGGAGATGCT 60.675 55.000 12.44 0.00 41.65 3.79
114 115 1.363744 CCAAACGAGTGGAGATGCTC 58.636 55.000 3.39 0.00 41.65 4.26
126 127 4.390297 GTGGAGATGCTCTTAGTGTTTGTC 59.610 45.833 0.00 0.00 0.00 3.18
150 151 9.547753 GTCTTCATAAACATCATATACACCACT 57.452 33.333 0.00 0.00 0.00 4.00
193 194 0.601046 ACACCATGCAGACACACTCG 60.601 55.000 0.00 0.00 0.00 4.18
264 265 4.037208 CCTTGCTTAATATCCAAGCCACAG 59.963 45.833 15.67 10.50 46.32 3.66
306 307 8.784043 GTTCTTCATGTTACAACCATAACTTCT 58.216 33.333 0.00 0.00 36.25 2.85
403 405 2.168326 TACCTCACACGACGTCTACA 57.832 50.000 14.70 0.00 0.00 2.74
404 406 0.873054 ACCTCACACGACGTCTACAG 59.127 55.000 14.70 0.00 0.00 2.74
461 463 7.112779 CACCTTCATTAAACATCTACTCCCTT 58.887 38.462 0.00 0.00 0.00 3.95
522 525 3.317149 GGAGTAAGCAAAACCCGACTTTT 59.683 43.478 0.00 0.00 0.00 2.27
531 554 5.520649 GCAAAACCCGACTTTTAATTCAACA 59.479 36.000 0.00 0.00 0.00 3.33
532 555 6.201997 GCAAAACCCGACTTTTAATTCAACAT 59.798 34.615 0.00 0.00 0.00 2.71
533 556 7.382759 GCAAAACCCGACTTTTAATTCAACATA 59.617 33.333 0.00 0.00 0.00 2.29
534 557 9.250624 CAAAACCCGACTTTTAATTCAACATAA 57.749 29.630 0.00 0.00 0.00 1.90
535 558 8.806177 AAACCCGACTTTTAATTCAACATAAC 57.194 30.769 0.00 0.00 0.00 1.89
536 559 7.754851 ACCCGACTTTTAATTCAACATAACT 57.245 32.000 0.00 0.00 0.00 2.24
537 560 8.173542 ACCCGACTTTTAATTCAACATAACTT 57.826 30.769 0.00 0.00 0.00 2.66
538 561 8.079809 ACCCGACTTTTAATTCAACATAACTTG 58.920 33.333 0.00 0.00 0.00 3.16
539 562 7.061789 CCCGACTTTTAATTCAACATAACTTGC 59.938 37.037 0.00 0.00 0.00 4.01
540 563 7.807907 CCGACTTTTAATTCAACATAACTTGCT 59.192 33.333 0.00 0.00 0.00 3.91
541 564 9.820229 CGACTTTTAATTCAACATAACTTGCTA 57.180 29.630 0.00 0.00 0.00 3.49
549 572 9.643693 AATTCAACATAACTTGCTAAAATCAGG 57.356 29.630 0.00 0.00 0.00 3.86
550 573 7.156876 TCAACATAACTTGCTAAAATCAGGG 57.843 36.000 0.00 0.00 0.00 4.45
582 634 6.484643 TGCTTTTATGGAGAATGAGATAGCAC 59.515 38.462 0.00 0.00 0.00 4.40
768 1346 2.347490 GGAGGCGTGGAAAGCAGA 59.653 61.111 0.00 0.00 45.63 4.26
1315 2828 0.107410 GGGGATTGGTGTATGCGTGA 60.107 55.000 0.00 0.00 0.00 4.35
1317 2830 1.400494 GGGATTGGTGTATGCGTGAAC 59.600 52.381 0.00 0.00 0.00 3.18
1322 2835 2.147958 TGGTGTATGCGTGAACCTTTC 58.852 47.619 11.78 0.00 33.65 2.62
1420 2966 5.588648 GGAATTTCGGGTGATTCAGTAATGA 59.411 40.000 0.00 0.00 34.67 2.57
1428 2974 5.476945 GGGTGATTCAGTAATGAAGTGGTTT 59.523 40.000 11.67 0.00 0.00 3.27
1449 3018 3.322211 TTTTGGTCGGAGCGAATAAGA 57.678 42.857 10.46 0.00 37.72 2.10
1450 3019 2.288961 TTGGTCGGAGCGAATAAGAC 57.711 50.000 2.41 0.00 37.72 3.01
1466 3035 5.632034 ATAAGACTTTCATACCAGGGACC 57.368 43.478 0.00 0.00 0.00 4.46
1579 3170 8.278729 TCTAATGTGCAATGTGTGAAATATCA 57.721 30.769 0.00 0.00 0.00 2.15
1580 3171 8.400186 TCTAATGTGCAATGTGTGAAATATCAG 58.600 33.333 0.00 0.00 35.88 2.90
1581 3172 6.762702 ATGTGCAATGTGTGAAATATCAGA 57.237 33.333 0.00 0.00 35.88 3.27
1609 3212 5.411781 ACCGAGAAACTGAGCTTAATAGTG 58.588 41.667 0.00 0.00 0.00 2.74
1641 3245 5.346011 TGAAGTTCAGTCTTCATCGATTTCG 59.654 40.000 0.08 0.00 45.62 3.46
1643 3247 5.230942 AGTTCAGTCTTCATCGATTTCGTT 58.769 37.500 0.00 0.00 40.80 3.85
1650 3254 0.587242 CATCGATTTCGTTGGCGCAG 60.587 55.000 10.83 0.00 40.80 5.18
1675 3279 1.738908 TGTGCAATGTGATCATCCGTG 59.261 47.619 0.00 0.00 32.56 4.94
1678 3282 1.671979 CAATGTGATCATCCGTGGCT 58.328 50.000 0.00 0.00 32.56 4.75
1765 3382 3.412386 ACTTATCTGGTGCCAAACAGAC 58.588 45.455 2.83 0.00 45.54 3.51
1771 3388 0.388659 GGTGCCAAACAGACAATGCA 59.611 50.000 0.00 0.00 0.00 3.96
1773 3390 1.067516 GTGCCAAACAGACAATGCAGT 59.932 47.619 0.00 0.00 0.00 4.40
1786 3403 1.251251 ATGCAGTTGGGAAGCTTGAC 58.749 50.000 2.10 0.00 0.00 3.18
1787 3404 0.183492 TGCAGTTGGGAAGCTTGACT 59.817 50.000 2.10 0.00 0.00 3.41
1791 3408 3.430790 GCAGTTGGGAAGCTTGACTTTTT 60.431 43.478 2.10 0.00 39.29 1.94
1793 3410 3.769300 AGTTGGGAAGCTTGACTTTTTGT 59.231 39.130 2.10 0.00 39.29 2.83
1794 3411 4.112634 GTTGGGAAGCTTGACTTTTTGTC 58.887 43.478 2.10 0.00 45.54 3.18
1804 3421 3.790212 GACTTTTTGTCGGTGCTAGTC 57.210 47.619 0.00 0.00 35.81 2.59
1805 3422 3.128349 GACTTTTTGTCGGTGCTAGTCA 58.872 45.455 0.00 0.00 35.81 3.41
1806 3423 3.740115 ACTTTTTGTCGGTGCTAGTCAT 58.260 40.909 0.00 0.00 0.00 3.06
1807 3424 3.498397 ACTTTTTGTCGGTGCTAGTCATG 59.502 43.478 0.00 0.00 0.00 3.07
1808 3425 1.438651 TTTGTCGGTGCTAGTCATGC 58.561 50.000 0.00 0.00 0.00 4.06
1809 3426 0.608130 TTGTCGGTGCTAGTCATGCT 59.392 50.000 0.00 0.00 0.00 3.79
1810 3427 1.470051 TGTCGGTGCTAGTCATGCTA 58.530 50.000 0.00 0.00 0.00 3.49
1849 3466 8.185505 TGTAAAACCAGTTTGTTAGTAGCTTTG 58.814 33.333 0.00 0.00 32.36 2.77
1856 3473 7.246311 CAGTTTGTTAGTAGCTTTGATCCATG 58.754 38.462 0.00 0.00 0.00 3.66
1860 3477 6.888105 TGTTAGTAGCTTTGATCCATGATGA 58.112 36.000 0.00 0.00 0.00 2.92
1861 3478 7.337938 TGTTAGTAGCTTTGATCCATGATGAA 58.662 34.615 0.00 0.00 0.00 2.57
1862 3479 7.994911 TGTTAGTAGCTTTGATCCATGATGAAT 59.005 33.333 0.00 0.00 0.00 2.57
1863 3480 8.844244 GTTAGTAGCTTTGATCCATGATGAATT 58.156 33.333 0.00 0.00 0.00 2.17
1864 3481 7.273320 AGTAGCTTTGATCCATGATGAATTG 57.727 36.000 0.00 0.00 0.00 2.32
1865 3482 4.945246 AGCTTTGATCCATGATGAATTGC 58.055 39.130 0.00 0.00 0.00 3.56
1866 3483 4.056050 GCTTTGATCCATGATGAATTGCC 58.944 43.478 0.00 0.00 0.00 4.52
1867 3484 4.202223 GCTTTGATCCATGATGAATTGCCT 60.202 41.667 0.00 0.00 0.00 4.75
1868 3485 5.524971 TTTGATCCATGATGAATTGCCTC 57.475 39.130 0.00 0.00 0.00 4.70
1869 3486 4.448720 TGATCCATGATGAATTGCCTCT 57.551 40.909 0.00 0.00 0.00 3.69
1870 3487 4.395625 TGATCCATGATGAATTGCCTCTC 58.604 43.478 0.00 0.00 0.00 3.20
1871 3488 2.842457 TCCATGATGAATTGCCTCTCG 58.158 47.619 0.00 0.00 0.00 4.04
1872 3489 1.266175 CCATGATGAATTGCCTCTCGC 59.734 52.381 0.00 0.00 38.31 5.03
1873 3490 1.070108 CATGATGAATTGCCTCTCGCG 60.070 52.381 0.00 0.00 42.08 5.87
1874 3491 0.175531 TGATGAATTGCCTCTCGCGA 59.824 50.000 9.26 9.26 42.08 5.87
1875 3492 1.290203 GATGAATTGCCTCTCGCGAA 58.710 50.000 11.33 0.02 42.08 4.70
1876 3493 1.260033 GATGAATTGCCTCTCGCGAAG 59.740 52.381 11.33 10.63 42.08 3.79
1877 3494 0.037326 TGAATTGCCTCTCGCGAAGT 60.037 50.000 11.33 0.00 42.08 3.01
1878 3495 0.647925 GAATTGCCTCTCGCGAAGTC 59.352 55.000 11.33 0.00 42.08 3.01
1879 3496 1.078759 AATTGCCTCTCGCGAAGTCG 61.079 55.000 11.33 0.00 42.08 4.18
1880 3497 2.214181 ATTGCCTCTCGCGAAGTCGT 62.214 55.000 11.33 0.00 42.08 4.34
1888 3505 3.762231 CGCGAAGTCGTGCTTTATC 57.238 52.632 0.00 0.00 43.06 1.75
1889 3506 1.269166 CGCGAAGTCGTGCTTTATCT 58.731 50.000 0.00 0.00 43.06 1.98
1890 3507 1.654105 CGCGAAGTCGTGCTTTATCTT 59.346 47.619 0.00 0.00 43.06 2.40
1891 3508 2.532973 CGCGAAGTCGTGCTTTATCTTG 60.533 50.000 0.00 0.00 43.06 3.02
1892 3509 2.222819 GCGAAGTCGTGCTTTATCTTGG 60.223 50.000 2.25 0.00 42.22 3.61
1893 3510 2.348666 CGAAGTCGTGCTTTATCTTGGG 59.651 50.000 0.00 0.00 37.59 4.12
1894 3511 2.403252 AGTCGTGCTTTATCTTGGGG 57.597 50.000 0.00 0.00 0.00 4.96
1895 3512 1.906574 AGTCGTGCTTTATCTTGGGGA 59.093 47.619 0.00 0.00 0.00 4.81
1896 3513 2.505819 AGTCGTGCTTTATCTTGGGGAT 59.494 45.455 0.00 0.00 38.38 3.85
1897 3514 3.054361 AGTCGTGCTTTATCTTGGGGATT 60.054 43.478 0.00 0.00 35.98 3.01
1898 3515 3.694566 GTCGTGCTTTATCTTGGGGATTT 59.305 43.478 0.00 0.00 35.98 2.17
1899 3516 4.157840 GTCGTGCTTTATCTTGGGGATTTT 59.842 41.667 0.00 0.00 35.98 1.82
1900 3517 4.770010 TCGTGCTTTATCTTGGGGATTTTT 59.230 37.500 0.00 0.00 35.98 1.94
1901 3518 4.864247 CGTGCTTTATCTTGGGGATTTTTG 59.136 41.667 0.00 0.00 35.98 2.44
1902 3519 5.178061 GTGCTTTATCTTGGGGATTTTTGG 58.822 41.667 0.00 0.00 35.98 3.28
1905 3522 5.643348 GCTTTATCTTGGGGATTTTTGGTTG 59.357 40.000 0.00 0.00 35.98 3.77
1933 3550 1.068954 GCTGTTTCACAGGCTTGTAGC 60.069 52.381 0.00 2.75 46.01 3.58
1934 3551 2.221169 CTGTTTCACAGGCTTGTAGCA 58.779 47.619 0.00 0.00 44.75 3.49
1935 3552 2.816087 CTGTTTCACAGGCTTGTAGCAT 59.184 45.455 0.00 0.00 44.75 3.79
1936 3553 2.813754 TGTTTCACAGGCTTGTAGCATC 59.186 45.455 0.00 0.00 44.75 3.91
1937 3554 2.813754 GTTTCACAGGCTTGTAGCATCA 59.186 45.455 0.00 0.00 44.75 3.07
1938 3555 2.391616 TCACAGGCTTGTAGCATCAG 57.608 50.000 0.00 0.00 44.75 2.90
1939 3556 1.065926 TCACAGGCTTGTAGCATCAGG 60.066 52.381 0.00 0.00 44.75 3.86
1940 3557 1.065926 CACAGGCTTGTAGCATCAGGA 60.066 52.381 0.00 0.00 44.75 3.86
1943 3560 1.020437 GGCTTGTAGCATCAGGAAGC 58.980 55.000 0.67 0.00 44.75 3.86
1944 3561 1.679944 GGCTTGTAGCATCAGGAAGCA 60.680 52.381 0.00 0.00 44.75 3.91
1945 3562 2.295885 GCTTGTAGCATCAGGAAGCAT 58.704 47.619 0.00 0.00 41.89 3.79
1946 3563 2.033049 GCTTGTAGCATCAGGAAGCATG 59.967 50.000 0.00 0.00 41.89 4.06
1951 3568 2.667473 GCATCAGGAAGCATGCTTTT 57.333 45.000 32.36 21.08 41.93 2.27
1952 3569 3.788333 GCATCAGGAAGCATGCTTTTA 57.212 42.857 32.36 18.44 41.93 1.52
1953 3570 3.703420 GCATCAGGAAGCATGCTTTTAG 58.297 45.455 32.36 23.16 41.93 1.85
1954 3571 3.129988 GCATCAGGAAGCATGCTTTTAGT 59.870 43.478 32.36 11.80 41.93 2.24
1955 3572 4.732938 GCATCAGGAAGCATGCTTTTAGTC 60.733 45.833 32.36 19.75 41.93 2.59
1956 3573 4.019792 TCAGGAAGCATGCTTTTAGTCA 57.980 40.909 32.36 12.99 36.26 3.41
1957 3574 4.397420 TCAGGAAGCATGCTTTTAGTCAA 58.603 39.130 32.36 12.84 36.26 3.18
1958 3575 4.456911 TCAGGAAGCATGCTTTTAGTCAAG 59.543 41.667 32.36 15.52 36.26 3.02
1959 3576 4.456911 CAGGAAGCATGCTTTTAGTCAAGA 59.543 41.667 32.36 0.00 36.26 3.02
1960 3577 5.125097 CAGGAAGCATGCTTTTAGTCAAGAT 59.875 40.000 32.36 7.13 36.26 2.40
1961 3578 5.713861 AGGAAGCATGCTTTTAGTCAAGATT 59.286 36.000 32.36 6.91 36.26 2.40
1962 3579 6.210185 AGGAAGCATGCTTTTAGTCAAGATTT 59.790 34.615 32.36 6.42 36.26 2.17
1963 3580 6.529477 GGAAGCATGCTTTTAGTCAAGATTTC 59.471 38.462 32.36 15.04 36.26 2.17
1964 3581 6.830873 AGCATGCTTTTAGTCAAGATTTCT 57.169 33.333 16.30 0.00 0.00 2.52
1965 3582 6.618811 AGCATGCTTTTAGTCAAGATTTCTG 58.381 36.000 16.30 0.00 0.00 3.02
1966 3583 5.803967 GCATGCTTTTAGTCAAGATTTCTGG 59.196 40.000 11.37 0.00 0.00 3.86
1967 3584 6.571150 GCATGCTTTTAGTCAAGATTTCTGGT 60.571 38.462 11.37 0.00 0.00 4.00
1968 3585 6.959639 TGCTTTTAGTCAAGATTTCTGGTT 57.040 33.333 0.00 0.00 0.00 3.67
1985 3602 4.701171 TCTGGTTCGGTTGTTAGTTTTGTT 59.299 37.500 0.00 0.00 0.00 2.83
1986 3603 4.984205 TGGTTCGGTTGTTAGTTTTGTTC 58.016 39.130 0.00 0.00 0.00 3.18
1998 3615 6.603997 TGTTAGTTTTGTTCCCTGCTCTTTTA 59.396 34.615 0.00 0.00 0.00 1.52
2005 3622 5.509498 TGTTCCCTGCTCTTTTATAAGCAT 58.491 37.500 0.00 0.00 46.69 3.79
2129 3765 1.271871 TGGCTGTGGTTTCCTGTATGG 60.272 52.381 0.00 0.00 37.10 2.74
2151 3787 6.767456 TGGATAACCGTTAGTTCCAACTTTA 58.233 36.000 10.10 0.00 40.05 1.85
2173 3809 4.085876 CCAGGTTGTTCTGGCTGG 57.914 61.111 0.00 0.00 46.47 4.85
2649 4296 4.974645 AGGAACTTCTGTATCCACAACA 57.025 40.909 0.00 0.00 35.62 3.33
2711 4555 7.998383 ACTAGGTATTGTTCAATATCATTGCCA 59.002 33.333 15.30 0.00 0.00 4.92
2733 4577 2.206900 TGCCAAGAGGTCCTGGGA 59.793 61.111 0.00 0.00 38.32 4.37
2805 4649 2.446337 AATCCCTCCCCAGACCCCAA 62.446 60.000 0.00 0.00 0.00 4.12
2830 4674 4.606210 TGTGTGGGAGCTTCTATGTACTA 58.394 43.478 0.00 0.00 0.00 1.82
2840 4684 4.888239 GCTTCTATGTACTAGGTCTGTCCA 59.112 45.833 0.00 0.00 39.02 4.02
2865 4709 9.752961 CATTTAGGCATTGTTCAATATCATTGA 57.247 29.630 0.00 0.00 0.00 2.57
3013 4859 5.858581 GTGCCTTCTTTGTTGTTTATAGCTG 59.141 40.000 0.00 0.00 0.00 4.24
3178 5025 9.905171 GAAGGGAATAAAAGATTATCAAGATGC 57.095 33.333 0.00 0.00 31.28 3.91
3194 5041 4.162040 AGATGCTGTAGCCAATTAGCTT 57.838 40.909 3.06 0.00 41.41 3.74
3297 5146 3.572682 TGTACTATCTGCATCGGGTAAGG 59.427 47.826 0.00 0.00 0.00 2.69
3314 5163 6.531923 GGGTAAGGTTTTCTTCTCTTGTAGT 58.468 40.000 0.00 0.00 36.93 2.73
3364 5235 4.527038 ACGGTAACTTCCATCTCTGAAAGA 59.473 41.667 0.00 0.00 43.69 2.52
3410 5281 5.468746 GTGTCTAAGCAGTGGTATGTTTTGA 59.531 40.000 0.00 0.00 0.00 2.69
3473 5345 6.121776 TCCCTATTTCTTACAACTGCTTGA 57.878 37.500 0.00 0.00 0.00 3.02
3661 5536 1.331214 CAAGTGCTGGGGATGTTGTT 58.669 50.000 0.00 0.00 0.00 2.83
3666 5541 1.425066 TGCTGGGGATGTTGTTCTCTT 59.575 47.619 0.00 0.00 0.00 2.85
3676 5551 6.410540 GGATGTTGTTCTCTTACCTCAATCT 58.589 40.000 0.00 0.00 0.00 2.40
3706 5581 3.430453 CCTTGCTAATCCTGAAAACCCA 58.570 45.455 0.00 0.00 0.00 4.51
3811 5696 0.736053 TGAACAACAGCCCAACGAAC 59.264 50.000 0.00 0.00 0.00 3.95
3936 5984 5.117584 GCAGAGAGAATTCAGTGACATGAT 58.882 41.667 8.44 0.00 0.00 2.45
3956 6004 5.308825 TGATTGTCTTTTCTTCTCCACCTC 58.691 41.667 0.00 0.00 0.00 3.85
3980 6029 2.160417 GGCCTTCAAACTCAACTCATCG 59.840 50.000 0.00 0.00 0.00 3.84
4148 6200 2.895404 GGCTAGTCGGTACCCATATTCA 59.105 50.000 6.25 0.00 0.00 2.57
4163 6215 6.095440 ACCCATATTCAGTACAATGCTTTGAC 59.905 38.462 18.35 11.63 36.64 3.18
4210 6272 3.038280 TGCTAGCCTGCTGGTATTCTTA 58.962 45.455 13.29 0.00 35.27 2.10
4283 6345 5.817296 CGCTTTATCTTATAGGCCATATGCA 59.183 40.000 5.01 0.00 43.89 3.96
4286 6348 7.011857 GCTTTATCTTATAGGCCATATGCACTC 59.988 40.741 5.01 0.00 43.89 3.51
4290 6352 3.692257 ATAGGCCATATGCACTCTGAC 57.308 47.619 5.01 0.00 43.89 3.51
4315 6377 8.885722 ACCATTGATCAATTATTTTTCATGTGC 58.114 29.630 18.41 0.00 0.00 4.57
4332 6394 0.521291 TGCTGCGCATTTACCTGTTC 59.479 50.000 12.24 0.00 31.71 3.18
4662 6744 3.941483 GGTGTCCATCCAACTATCACTTG 59.059 47.826 0.00 0.00 0.00 3.16
4663 6745 4.565652 GGTGTCCATCCAACTATCACTTGT 60.566 45.833 0.00 0.00 0.00 3.16
4664 6746 5.003804 GTGTCCATCCAACTATCACTTGTT 58.996 41.667 0.00 0.00 0.00 2.83
4665 6747 5.003160 TGTCCATCCAACTATCACTTGTTG 58.997 41.667 0.00 0.00 42.05 3.33
4666 6748 5.003804 GTCCATCCAACTATCACTTGTTGT 58.996 41.667 0.00 0.00 41.16 3.32
4667 6749 6.170506 GTCCATCCAACTATCACTTGTTGTA 58.829 40.000 0.00 0.00 41.16 2.41
4668 6750 6.313905 GTCCATCCAACTATCACTTGTTGTAG 59.686 42.308 0.00 0.00 41.16 2.74
4669 6751 5.586243 CCATCCAACTATCACTTGTTGTAGG 59.414 44.000 0.00 0.00 41.16 3.18
4688 6770 1.087501 GCTTGTAGCTAACACCCAGC 58.912 55.000 0.00 0.00 38.00 4.85
4855 6950 7.170998 GGAGAAAACTGAACTCGTGAAGAAATA 59.829 37.037 0.00 0.00 0.00 1.40
4917 7013 3.119173 ACTCTTACTTGCAGAGCTAGCTG 60.119 47.826 24.99 11.14 41.49 4.24
5024 7135 6.572182 TCTGATCCATTCTTTCATTCTCCT 57.428 37.500 0.00 0.00 0.00 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 2.766651 TAGGTCCCATCCACGCCC 60.767 66.667 0.00 0.00 0.00 6.13
11 12 1.122019 ATCTAGGTCCCATCCACGCC 61.122 60.000 0.00 0.00 0.00 5.68
12 13 0.318762 GATCTAGGTCCCATCCACGC 59.681 60.000 0.00 0.00 0.00 5.34
13 14 0.598562 CGATCTAGGTCCCATCCACG 59.401 60.000 0.00 0.00 0.00 4.94
14 15 0.318762 GCGATCTAGGTCCCATCCAC 59.681 60.000 0.00 0.00 0.00 4.02
15 16 0.832135 GGCGATCTAGGTCCCATCCA 60.832 60.000 0.00 0.00 0.00 3.41
16 17 1.545706 GGGCGATCTAGGTCCCATCC 61.546 65.000 11.32 2.38 38.62 3.51
17 18 1.545706 GGGGCGATCTAGGTCCCATC 61.546 65.000 11.32 0.00 40.53 3.51
18 19 1.536662 GGGGCGATCTAGGTCCCAT 60.537 63.158 11.32 0.00 40.53 4.00
19 20 2.122989 GGGGCGATCTAGGTCCCA 60.123 66.667 11.32 0.00 40.53 4.37
20 21 2.923568 GGGGGCGATCTAGGTCCC 60.924 72.222 0.00 0.30 38.03 4.46
21 22 2.122989 TGGGGGCGATCTAGGTCC 60.123 66.667 0.00 0.00 0.00 4.46
22 23 2.210711 CCTGGGGGCGATCTAGGTC 61.211 68.421 0.00 0.00 0.00 3.85
23 24 2.122813 CCTGGGGGCGATCTAGGT 60.123 66.667 0.00 0.00 0.00 3.08
24 25 2.925170 CCCTGGGGGCGATCTAGG 60.925 72.222 4.27 0.00 35.35 3.02
34 35 1.077716 CGAGTTTTAGGCCCTGGGG 60.078 63.158 16.03 4.75 38.57 4.96
35 36 1.749258 GCGAGTTTTAGGCCCTGGG 60.749 63.158 8.86 8.86 0.00 4.45
36 37 1.749258 GGCGAGTTTTAGGCCCTGG 60.749 63.158 0.00 0.00 41.01 4.45
37 38 1.002624 TGGCGAGTTTTAGGCCCTG 60.003 57.895 0.00 0.00 46.31 4.45
38 39 1.299976 CTGGCGAGTTTTAGGCCCT 59.700 57.895 0.00 0.00 46.31 5.19
39 40 1.749258 CCTGGCGAGTTTTAGGCCC 60.749 63.158 0.00 0.00 46.31 5.80
65 66 2.650813 ATAGGCCTGCGCTCTTTCGG 62.651 60.000 17.99 0.38 34.44 4.30
66 67 1.227380 ATAGGCCTGCGCTCTTTCG 60.227 57.895 17.99 0.00 34.44 3.46
67 68 1.780025 GCATAGGCCTGCGCTCTTTC 61.780 60.000 17.99 0.00 34.44 2.62
68 69 1.821332 GCATAGGCCTGCGCTCTTT 60.821 57.895 17.99 0.00 34.44 2.52
69 70 2.203126 GCATAGGCCTGCGCTCTT 60.203 61.111 17.99 0.00 34.44 2.85
76 77 4.943252 CCCCAGCGCATAGGCCTG 62.943 72.222 17.99 0.25 37.78 4.85
81 82 4.504596 TTGGCCCCCAGCGCATAG 62.505 66.667 11.47 0.00 45.17 2.23
82 83 4.053871 TTTGGCCCCCAGCGCATA 62.054 61.111 11.47 0.00 45.17 3.14
87 88 4.660938 ACTCGTTTGGCCCCCAGC 62.661 66.667 0.00 0.00 42.60 4.85
88 89 2.672996 CACTCGTTTGGCCCCCAG 60.673 66.667 0.00 0.00 33.81 4.45
89 90 4.278513 CCACTCGTTTGGCCCCCA 62.279 66.667 0.00 0.00 0.00 4.96
90 91 3.920093 CTCCACTCGTTTGGCCCCC 62.920 68.421 0.00 0.00 36.48 5.40
91 92 2.198304 ATCTCCACTCGTTTGGCCCC 62.198 60.000 0.00 0.00 36.48 5.80
92 93 1.026718 CATCTCCACTCGTTTGGCCC 61.027 60.000 0.00 0.00 36.48 5.80
93 94 1.648467 GCATCTCCACTCGTTTGGCC 61.648 60.000 0.00 0.00 36.48 5.36
94 95 0.674895 AGCATCTCCACTCGTTTGGC 60.675 55.000 0.66 0.00 36.48 4.52
95 96 1.363744 GAGCATCTCCACTCGTTTGG 58.636 55.000 0.00 0.00 38.10 3.28
108 109 6.734104 ATGAAGACAAACACTAAGAGCATC 57.266 37.500 0.00 0.00 0.00 3.91
109 110 8.507249 GTTTATGAAGACAAACACTAAGAGCAT 58.493 33.333 0.00 0.00 35.25 3.79
110 111 7.497579 TGTTTATGAAGACAAACACTAAGAGCA 59.502 33.333 0.00 0.00 39.16 4.26
111 112 7.861630 TGTTTATGAAGACAAACACTAAGAGC 58.138 34.615 0.00 0.00 39.16 4.09
113 114 9.554395 TGATGTTTATGAAGACAAACACTAAGA 57.446 29.630 2.30 0.00 44.80 2.10
150 151 8.355913 TGTTGCACATGTCAATTGTTAATCTAA 58.644 29.630 5.13 0.00 0.00 2.10
157 158 3.118847 TGGTGTTGCACATGTCAATTGTT 60.119 39.130 5.13 0.00 35.86 2.83
178 179 1.494628 GTGCGAGTGTGTCTGCATG 59.505 57.895 0.00 0.00 39.85 4.06
193 194 1.191647 CAAACCAAGTAGACGTCGTGC 59.808 52.381 10.46 4.45 0.00 5.34
264 265 6.363577 TGAAGAACATGTTTGAGAGTCAAC 57.636 37.500 13.36 0.00 35.89 3.18
306 307 3.755905 ACATTAACATGTCGTGATGCCAA 59.244 39.130 0.00 0.00 39.69 4.52
345 346 7.373180 CGCGTGTAAATCTACGTACTGTATTTA 59.627 37.037 0.00 0.00 41.98 1.40
353 354 2.176369 TGCGCGTGTAAATCTACGTAC 58.824 47.619 8.43 0.00 41.98 3.67
354 355 2.541055 TGCGCGTGTAAATCTACGTA 57.459 45.000 8.43 0.00 41.98 3.57
403 405 2.316108 CCCCACTAAAAGCCAAACACT 58.684 47.619 0.00 0.00 0.00 3.55
404 406 2.036387 ACCCCACTAAAAGCCAAACAC 58.964 47.619 0.00 0.00 0.00 3.32
511 514 8.173542 AGTTATGTTGAATTAAAAGTCGGGTT 57.826 30.769 0.00 0.00 0.00 4.11
531 554 9.700831 AAGTTATCCCTGATTTTAGCAAGTTAT 57.299 29.630 0.00 0.00 0.00 1.89
532 555 8.956426 CAAGTTATCCCTGATTTTAGCAAGTTA 58.044 33.333 0.00 0.00 0.00 2.24
533 556 7.577616 GCAAGTTATCCCTGATTTTAGCAAGTT 60.578 37.037 0.00 0.00 0.00 2.66
534 557 6.127619 GCAAGTTATCCCTGATTTTAGCAAGT 60.128 38.462 0.00 0.00 0.00 3.16
535 558 6.096001 AGCAAGTTATCCCTGATTTTAGCAAG 59.904 38.462 0.00 0.00 0.00 4.01
536 559 5.951747 AGCAAGTTATCCCTGATTTTAGCAA 59.048 36.000 0.00 0.00 0.00 3.91
537 560 5.509498 AGCAAGTTATCCCTGATTTTAGCA 58.491 37.500 0.00 0.00 0.00 3.49
538 561 6.456795 AAGCAAGTTATCCCTGATTTTAGC 57.543 37.500 0.00 0.00 0.00 3.09
541 564 8.260114 CCATAAAAGCAAGTTATCCCTGATTTT 58.740 33.333 3.23 3.23 0.00 1.82
542 565 7.619302 TCCATAAAAGCAAGTTATCCCTGATTT 59.381 33.333 0.00 0.00 0.00 2.17
543 566 7.125391 TCCATAAAAGCAAGTTATCCCTGATT 58.875 34.615 0.00 0.00 0.00 2.57
544 567 6.672593 TCCATAAAAGCAAGTTATCCCTGAT 58.327 36.000 0.00 0.00 0.00 2.90
545 568 6.069673 TCTCCATAAAAGCAAGTTATCCCTGA 60.070 38.462 0.00 0.00 0.00 3.86
546 569 6.122277 TCTCCATAAAAGCAAGTTATCCCTG 58.878 40.000 0.00 0.00 0.00 4.45
547 570 6.327386 TCTCCATAAAAGCAAGTTATCCCT 57.673 37.500 0.00 0.00 0.00 4.20
548 571 7.285401 TCATTCTCCATAAAAGCAAGTTATCCC 59.715 37.037 0.00 0.00 0.00 3.85
549 572 8.225603 TCATTCTCCATAAAAGCAAGTTATCC 57.774 34.615 0.00 0.00 0.00 2.59
550 573 9.113838 TCTCATTCTCCATAAAAGCAAGTTATC 57.886 33.333 0.00 0.00 0.00 1.75
582 634 2.288273 GGTTCCTCCTCATATCGGTTCG 60.288 54.545 0.00 0.00 0.00 3.95
1322 2835 6.879188 AATAAACCAACGCAATAATTTCCG 57.121 33.333 0.00 0.00 0.00 4.30
1428 2974 3.434299 GTCTTATTCGCTCCGACCAAAAA 59.566 43.478 0.00 0.00 34.89 1.94
1443 3012 5.104067 GGGTCCCTGGTATGAAAGTCTTATT 60.104 44.000 0.00 0.00 0.00 1.40
1449 3018 1.916181 CTGGGTCCCTGGTATGAAAGT 59.084 52.381 10.00 0.00 0.00 2.66
1450 3019 1.212935 CCTGGGTCCCTGGTATGAAAG 59.787 57.143 23.06 2.61 37.76 2.62
1466 3035 0.768622 TAACAGAACCACCACCCTGG 59.231 55.000 0.00 0.00 45.02 4.45
1583 3174 7.009357 CACTATTAAGCTCAGTTTCTCGGTAAC 59.991 40.741 0.00 0.00 0.00 2.50
1584 3175 7.033791 CACTATTAAGCTCAGTTTCTCGGTAA 58.966 38.462 0.00 0.00 0.00 2.85
1586 3177 5.047235 ACACTATTAAGCTCAGTTTCTCGGT 60.047 40.000 0.00 0.00 0.00 4.69
1635 3239 2.485122 CCCTGCGCCAACGAAATC 59.515 61.111 4.18 0.00 43.93 2.17
1641 3245 3.977244 CACAACCCCTGCGCCAAC 61.977 66.667 4.18 0.00 0.00 3.77
1650 3254 1.255882 TGATCACATTGCACAACCCC 58.744 50.000 0.00 0.00 0.00 4.95
1741 3348 4.530553 TCTGTTTGGCACCAGATAAGTAGA 59.469 41.667 11.03 0.00 32.93 2.59
1748 3355 2.363306 TTGTCTGTTTGGCACCAGAT 57.637 45.000 16.47 0.00 39.70 2.90
1749 3356 1.955778 CATTGTCTGTTTGGCACCAGA 59.044 47.619 11.03 11.03 35.42 3.86
1750 3357 1.603678 GCATTGTCTGTTTGGCACCAG 60.604 52.381 6.96 6.96 0.00 4.00
1765 3382 1.614903 TCAAGCTTCCCAACTGCATTG 59.385 47.619 0.00 0.00 38.12 2.82
1771 3388 3.769300 ACAAAAAGTCAAGCTTCCCAACT 59.231 39.130 0.00 0.00 36.17 3.16
1773 3390 4.385358 GACAAAAAGTCAAGCTTCCCAA 57.615 40.909 0.00 0.00 46.77 4.12
1786 3403 3.667960 GCATGACTAGCACCGACAAAAAG 60.668 47.826 0.00 0.00 0.00 2.27
1787 3404 2.225491 GCATGACTAGCACCGACAAAAA 59.775 45.455 0.00 0.00 0.00 1.94
1791 3408 1.405463 CTAGCATGACTAGCACCGACA 59.595 52.381 0.00 0.00 41.99 4.35
1793 3410 2.052782 TCTAGCATGACTAGCACCGA 57.947 50.000 15.34 1.24 46.93 4.69
1794 3411 2.860735 GTTTCTAGCATGACTAGCACCG 59.139 50.000 15.34 0.00 46.93 4.94
1795 3412 4.130286 AGTTTCTAGCATGACTAGCACC 57.870 45.455 15.34 2.69 46.93 5.01
1796 3413 5.415221 AGAAGTTTCTAGCATGACTAGCAC 58.585 41.667 15.34 13.98 46.93 4.40
1797 3414 5.667539 AGAAGTTTCTAGCATGACTAGCA 57.332 39.130 15.34 6.05 46.93 3.49
1809 3426 7.732996 ACTGGTTTTACAGCTAGAAGTTTCTA 58.267 34.615 0.00 1.95 42.21 2.10
1810 3427 6.592870 ACTGGTTTTACAGCTAGAAGTTTCT 58.407 36.000 0.00 0.00 42.21 2.52
1811 3428 6.862711 ACTGGTTTTACAGCTAGAAGTTTC 57.137 37.500 0.00 0.00 42.21 2.78
1812 3429 7.122204 ACAAACTGGTTTTACAGCTAGAAGTTT 59.878 33.333 0.00 0.00 42.21 2.66
1813 3430 6.602009 ACAAACTGGTTTTACAGCTAGAAGTT 59.398 34.615 0.00 0.00 42.21 2.66
1814 3431 6.120220 ACAAACTGGTTTTACAGCTAGAAGT 58.880 36.000 0.00 0.00 42.21 3.01
1815 3432 6.619801 ACAAACTGGTTTTACAGCTAGAAG 57.380 37.500 0.00 0.00 42.21 2.85
1816 3433 7.771826 ACTAACAAACTGGTTTTACAGCTAGAA 59.228 33.333 0.00 0.00 42.21 2.10
1819 3436 7.172019 GCTACTAACAAACTGGTTTTACAGCTA 59.828 37.037 0.00 0.00 42.21 3.32
1822 3439 7.492352 AGCTACTAACAAACTGGTTTTACAG 57.508 36.000 0.00 0.00 44.03 2.74
1828 3445 6.206829 GGATCAAAGCTACTAACAAACTGGTT 59.793 38.462 0.00 0.00 34.81 3.67
1829 3446 5.705905 GGATCAAAGCTACTAACAAACTGGT 59.294 40.000 0.00 0.00 0.00 4.00
1830 3447 5.705441 TGGATCAAAGCTACTAACAAACTGG 59.295 40.000 0.00 0.00 0.00 4.00
1849 3466 3.436015 CGAGAGGCAATTCATCATGGATC 59.564 47.826 0.00 0.00 0.00 3.36
1856 3473 1.260033 CTTCGCGAGAGGCAATTCATC 59.740 52.381 9.59 0.00 43.84 2.92
1860 3477 1.078759 CGACTTCGCGAGAGGCAATT 61.079 55.000 19.46 0.00 41.52 2.32
1861 3478 1.517257 CGACTTCGCGAGAGGCAAT 60.517 57.895 19.46 3.01 41.52 3.56
1862 3479 2.126463 CGACTTCGCGAGAGGCAA 60.126 61.111 19.46 0.86 41.52 4.52
1863 3480 3.362797 ACGACTTCGCGAGAGGCA 61.363 61.111 19.46 1.55 41.52 4.75
1864 3481 2.876645 CACGACTTCGCGAGAGGC 60.877 66.667 9.59 11.36 41.52 4.70
1865 3482 2.804368 AAGCACGACTTCGCGAGAGG 62.804 60.000 9.59 6.59 44.43 3.69
1866 3483 1.004277 AAAGCACGACTTCGCGAGAG 61.004 55.000 9.59 12.49 44.43 3.20
1867 3484 0.239082 TAAAGCACGACTTCGCGAGA 59.761 50.000 9.59 0.00 44.43 4.04
1868 3485 1.253034 GATAAAGCACGACTTCGCGAG 59.747 52.381 9.59 6.46 44.43 5.03
1869 3486 1.135489 AGATAAAGCACGACTTCGCGA 60.135 47.619 3.71 3.71 44.43 5.87
1870 3487 1.269166 AGATAAAGCACGACTTCGCG 58.731 50.000 0.00 0.00 44.43 5.87
1871 3488 2.222819 CCAAGATAAAGCACGACTTCGC 60.223 50.000 0.00 0.00 44.43 4.70
1872 3489 2.348666 CCCAAGATAAAGCACGACTTCG 59.651 50.000 0.00 0.00 46.33 3.79
1873 3490 2.678336 CCCCAAGATAAAGCACGACTTC 59.322 50.000 0.00 0.00 37.75 3.01
1874 3491 2.304761 TCCCCAAGATAAAGCACGACTT 59.695 45.455 0.00 0.00 41.70 3.01
1875 3492 1.906574 TCCCCAAGATAAAGCACGACT 59.093 47.619 0.00 0.00 0.00 4.18
1876 3493 2.396590 TCCCCAAGATAAAGCACGAC 57.603 50.000 0.00 0.00 0.00 4.34
1877 3494 3.644966 AATCCCCAAGATAAAGCACGA 57.355 42.857 0.00 0.00 33.66 4.35
1878 3495 4.718940 AAAATCCCCAAGATAAAGCACG 57.281 40.909 0.00 0.00 33.66 5.34
1879 3496 5.178061 CCAAAAATCCCCAAGATAAAGCAC 58.822 41.667 0.00 0.00 33.66 4.40
1880 3497 4.843516 ACCAAAAATCCCCAAGATAAAGCA 59.156 37.500 0.00 0.00 33.66 3.91
1881 3498 5.420725 ACCAAAAATCCCCAAGATAAAGC 57.579 39.130 0.00 0.00 33.66 3.51
1882 3499 6.172630 CCAACCAAAAATCCCCAAGATAAAG 58.827 40.000 0.00 0.00 33.66 1.85
1883 3500 5.608860 ACCAACCAAAAATCCCCAAGATAAA 59.391 36.000 0.00 0.00 33.66 1.40
1884 3501 5.158889 ACCAACCAAAAATCCCCAAGATAA 58.841 37.500 0.00 0.00 33.66 1.75
1885 3502 4.757692 ACCAACCAAAAATCCCCAAGATA 58.242 39.130 0.00 0.00 33.66 1.98
1886 3503 3.597182 ACCAACCAAAAATCCCCAAGAT 58.403 40.909 0.00 0.00 36.48 2.40
1887 3504 3.053359 ACCAACCAAAAATCCCCAAGA 57.947 42.857 0.00 0.00 0.00 3.02
1888 3505 3.475575 CAACCAACCAAAAATCCCCAAG 58.524 45.455 0.00 0.00 0.00 3.61
1889 3506 2.422093 GCAACCAACCAAAAATCCCCAA 60.422 45.455 0.00 0.00 0.00 4.12
1890 3507 1.141858 GCAACCAACCAAAAATCCCCA 59.858 47.619 0.00 0.00 0.00 4.96
1891 3508 1.544537 GGCAACCAACCAAAAATCCCC 60.545 52.381 0.00 0.00 0.00 4.81
1892 3509 1.141858 TGGCAACCAACCAAAAATCCC 59.858 47.619 0.00 0.00 33.12 3.85
1893 3510 2.493035 CTGGCAACCAACCAAAAATCC 58.507 47.619 0.00 0.00 36.56 3.01
1894 3511 1.872952 GCTGGCAACCAACCAAAAATC 59.127 47.619 0.00 0.00 36.56 2.17
1895 3512 1.490069 AGCTGGCAACCAACCAAAAAT 59.510 42.857 0.00 0.00 36.56 1.82
1896 3513 0.908198 AGCTGGCAACCAACCAAAAA 59.092 45.000 0.00 0.00 36.56 1.94
1897 3514 0.177604 CAGCTGGCAACCAACCAAAA 59.822 50.000 5.57 0.00 36.56 2.44
1898 3515 0.975040 ACAGCTGGCAACCAACCAAA 60.975 50.000 19.93 0.00 36.56 3.28
1899 3516 0.975040 AACAGCTGGCAACCAACCAA 60.975 50.000 19.93 0.00 36.56 3.67
1900 3517 0.975040 AAACAGCTGGCAACCAACCA 60.975 50.000 19.93 0.00 30.80 3.67
1901 3518 0.249447 GAAACAGCTGGCAACCAACC 60.249 55.000 19.93 0.00 30.80 3.77
1902 3519 0.459489 TGAAACAGCTGGCAACCAAC 59.541 50.000 19.93 1.23 30.80 3.77
1905 3522 2.114638 TGTGAAACAGCTGGCAACC 58.885 52.632 19.93 3.32 45.67 3.77
1924 3541 1.020437 GCTTCCTGATGCTACAAGCC 58.980 55.000 0.00 0.00 41.51 4.35
1933 3550 4.397103 TGACTAAAAGCATGCTTCCTGATG 59.603 41.667 32.01 19.76 34.84 3.07
1934 3551 4.592942 TGACTAAAAGCATGCTTCCTGAT 58.407 39.130 32.01 14.46 34.84 2.90
1935 3552 4.019792 TGACTAAAAGCATGCTTCCTGA 57.980 40.909 32.01 16.41 34.84 3.86
1936 3553 4.456911 TCTTGACTAAAAGCATGCTTCCTG 59.543 41.667 32.01 24.10 34.84 3.86
1937 3554 4.655963 TCTTGACTAAAAGCATGCTTCCT 58.344 39.130 32.01 23.35 34.84 3.36
1938 3555 5.573337 ATCTTGACTAAAAGCATGCTTCC 57.427 39.130 32.01 18.31 34.84 3.46
1939 3556 7.272948 CAGAAATCTTGACTAAAAGCATGCTTC 59.727 37.037 32.01 20.02 34.84 3.86
1940 3557 7.088905 CAGAAATCTTGACTAAAAGCATGCTT 58.911 34.615 27.21 27.21 37.98 3.91
1943 3560 6.917533 ACCAGAAATCTTGACTAAAAGCATG 58.082 36.000 0.00 0.00 0.00 4.06
1944 3561 7.530426 AACCAGAAATCTTGACTAAAAGCAT 57.470 32.000 0.00 0.00 0.00 3.79
1945 3562 6.293407 CGAACCAGAAATCTTGACTAAAAGCA 60.293 38.462 0.00 0.00 0.00 3.91
1946 3563 6.080406 CGAACCAGAAATCTTGACTAAAAGC 58.920 40.000 0.00 0.00 0.00 3.51
1948 3565 6.059484 ACCGAACCAGAAATCTTGACTAAAA 58.941 36.000 0.00 0.00 0.00 1.52
1949 3566 5.617252 ACCGAACCAGAAATCTTGACTAAA 58.383 37.500 0.00 0.00 0.00 1.85
1950 3567 5.223449 ACCGAACCAGAAATCTTGACTAA 57.777 39.130 0.00 0.00 0.00 2.24
1951 3568 4.884668 ACCGAACCAGAAATCTTGACTA 57.115 40.909 0.00 0.00 0.00 2.59
1952 3569 3.771577 ACCGAACCAGAAATCTTGACT 57.228 42.857 0.00 0.00 0.00 3.41
1953 3570 3.564225 ACAACCGAACCAGAAATCTTGAC 59.436 43.478 0.00 0.00 0.00 3.18
1954 3571 3.815809 ACAACCGAACCAGAAATCTTGA 58.184 40.909 0.00 0.00 0.00 3.02
1955 3572 4.568152 AACAACCGAACCAGAAATCTTG 57.432 40.909 0.00 0.00 0.00 3.02
1956 3573 5.374071 ACTAACAACCGAACCAGAAATCTT 58.626 37.500 0.00 0.00 0.00 2.40
1957 3574 4.969484 ACTAACAACCGAACCAGAAATCT 58.031 39.130 0.00 0.00 0.00 2.40
1958 3575 5.684550 AACTAACAACCGAACCAGAAATC 57.315 39.130 0.00 0.00 0.00 2.17
1959 3576 6.127563 ACAAAACTAACAACCGAACCAGAAAT 60.128 34.615 0.00 0.00 0.00 2.17
1960 3577 5.183522 ACAAAACTAACAACCGAACCAGAAA 59.816 36.000 0.00 0.00 0.00 2.52
1961 3578 4.701171 ACAAAACTAACAACCGAACCAGAA 59.299 37.500 0.00 0.00 0.00 3.02
1962 3579 4.263435 ACAAAACTAACAACCGAACCAGA 58.737 39.130 0.00 0.00 0.00 3.86
1963 3580 4.625972 ACAAAACTAACAACCGAACCAG 57.374 40.909 0.00 0.00 0.00 4.00
1964 3581 4.142425 GGAACAAAACTAACAACCGAACCA 60.142 41.667 0.00 0.00 0.00 3.67
1965 3582 4.353737 GGAACAAAACTAACAACCGAACC 58.646 43.478 0.00 0.00 0.00 3.62
1966 3583 4.096833 AGGGAACAAAACTAACAACCGAAC 59.903 41.667 0.00 0.00 0.00 3.95
1967 3584 4.096682 CAGGGAACAAAACTAACAACCGAA 59.903 41.667 0.00 0.00 0.00 4.30
1968 3585 3.628487 CAGGGAACAAAACTAACAACCGA 59.372 43.478 0.00 0.00 0.00 4.69
1998 3615 6.044682 GCAAAGAAAACCATAGCATGCTTAT 58.955 36.000 28.02 14.09 0.00 1.73
2005 3622 5.229423 GTCAATGCAAAGAAAACCATAGCA 58.771 37.500 0.00 0.00 34.78 3.49
2129 3765 7.599998 TGTCTAAAGTTGGAACTAACGGTTATC 59.400 37.037 0.29 0.00 38.57 1.75
2173 3809 7.978975 TGCTTATTGCTGGTTACCATTTTAATC 59.021 33.333 3.88 0.00 43.37 1.75
2235 3874 6.566079 TTTTCACATGATCACCTCCTAGAT 57.434 37.500 0.00 0.00 0.00 1.98
2290 3931 7.509546 TCTGACAGATAGTTCAGAAAGGTTTT 58.490 34.615 0.00 0.00 34.04 2.43
2649 4296 6.658816 TGTATACCATGAGCATTTCAGTTGTT 59.341 34.615 0.00 0.00 39.68 2.83
2683 4330 9.056005 GCAATGATATTGAACAATACCTAGTGA 57.944 33.333 9.04 0.00 36.24 3.41
2684 4331 8.292448 GGCAATGATATTGAACAATACCTAGTG 58.708 37.037 9.04 8.92 36.24 2.74
2686 4333 8.292448 GTGGCAATGATATTGAACAATACCTAG 58.708 37.037 9.04 0.00 36.24 3.02
2691 4535 7.975058 CACAAGTGGCAATGATATTGAACAATA 59.025 33.333 9.23 9.23 37.64 1.90
2733 4577 1.260538 TGCAGAGAGGCTGGTTCGAT 61.261 55.000 0.00 0.00 45.03 3.59
2805 4649 2.639839 ACATAGAAGCTCCCACACAAGT 59.360 45.455 0.00 0.00 0.00 3.16
2830 4674 3.010584 ACAATGCCTAAATGGACAGACCT 59.989 43.478 0.00 0.00 39.86 3.85
3013 4859 7.541091 TCAATCTTAACACGAGAACATACAGAC 59.459 37.037 0.00 0.00 0.00 3.51
3072 4918 9.734984 TTTCTCTAGGAAAATCGGATAAACTTT 57.265 29.630 4.49 0.00 40.51 2.66
3084 4930 5.956563 TCCTACCGTCTTTCTCTAGGAAAAT 59.043 40.000 7.51 0.00 42.52 1.82
3178 5025 5.363101 TCTCATCAAGCTAATTGGCTACAG 58.637 41.667 17.39 10.18 42.24 2.74
3297 5146 5.612351 AGGTGGACTACAAGAGAAGAAAAC 58.388 41.667 0.00 0.00 0.00 2.43
3314 5163 4.175962 AGGGAACAATCTCTTAAGGTGGA 58.824 43.478 1.85 0.00 29.70 4.02
3364 5235 8.917414 ACACCATGGTATAGAATATGGATAGT 57.083 34.615 19.28 2.01 42.05 2.12
3473 5345 9.893305 CAAATACCGAGAAGAAATAACAAGTTT 57.107 29.630 0.00 0.00 0.00 2.66
3661 5536 5.940470 GCCTTTTGAAGATTGAGGTAAGAGA 59.060 40.000 0.00 0.00 0.00 3.10
3666 5541 4.657814 AGGCCTTTTGAAGATTGAGGTA 57.342 40.909 0.00 0.00 0.00 3.08
3676 5551 3.511146 CAGGATTAGCAAGGCCTTTTGAA 59.489 43.478 17.61 10.22 0.00 2.69
3706 5581 1.139853 CCCTTGCGCTTCTTAGGAGAT 59.860 52.381 9.73 0.00 0.00 2.75
3779 5654 4.021544 GCTGTTGTTCATATCCCCAACAAA 60.022 41.667 10.24 0.00 44.49 2.83
3936 5984 5.126067 CAAGAGGTGGAGAAGAAAAGACAA 58.874 41.667 0.00 0.00 0.00 3.18
3956 6004 2.951642 TGAGTTGAGTTTGAAGGCCAAG 59.048 45.455 5.01 0.00 35.94 3.61
3980 6029 0.736053 TGACCAACCGTTGAAACTGC 59.264 50.000 13.04 0.00 0.00 4.40
4148 6200 6.936900 ACTGAACATAGTCAAAGCATTGTACT 59.063 34.615 1.04 6.76 37.79 2.73
4163 6215 6.817765 ATACAAAACCACCACTGAACATAG 57.182 37.500 0.00 0.00 0.00 2.23
4256 6318 4.948341 TGGCCTATAAGATAAAGCGTCA 57.052 40.909 3.32 0.00 0.00 4.35
4290 6352 9.104965 AGCACATGAAAAATAATTGATCAATGG 57.895 29.630 21.39 4.59 0.00 3.16
4315 6377 1.806542 ACAGAACAGGTAAATGCGCAG 59.193 47.619 18.32 1.98 0.00 5.18
4332 6394 0.165944 GCCGTCCGTGAATGAAACAG 59.834 55.000 0.00 0.00 0.00 3.16
4359 6421 3.006323 TGCGCAAAACAAAACAGGGATAT 59.994 39.130 8.16 0.00 0.00 1.63
4418 6481 8.151596 ACTTATTTCCTTTTATTCCCGCAAAAA 58.848 29.630 0.00 0.00 0.00 1.94
4419 6482 7.672240 ACTTATTTCCTTTTATTCCCGCAAAA 58.328 30.769 0.00 0.00 0.00 2.44
4420 6483 7.234661 ACTTATTTCCTTTTATTCCCGCAAA 57.765 32.000 0.00 0.00 0.00 3.68
4421 6484 6.844097 ACTTATTTCCTTTTATTCCCGCAA 57.156 33.333 0.00 0.00 0.00 4.85
4422 6485 6.844097 AACTTATTTCCTTTTATTCCCGCA 57.156 33.333 0.00 0.00 0.00 5.69
4423 6486 9.244799 CATAAACTTATTTCCTTTTATTCCCGC 57.755 33.333 0.00 0.00 0.00 6.13
4430 6493 9.504708 TCCGTGTCATAAACTTATTTCCTTTTA 57.495 29.630 0.00 0.00 0.00 1.52
4434 6497 7.280205 GTCATCCGTGTCATAAACTTATTTCCT 59.720 37.037 0.00 0.00 0.00 3.36
4662 6744 3.683340 GGTGTTAGCTACAAGCCTACAAC 59.317 47.826 0.00 0.00 43.77 3.32
4663 6745 3.307199 GGGTGTTAGCTACAAGCCTACAA 60.307 47.826 13.48 0.00 43.77 2.41
4664 6746 2.235402 GGGTGTTAGCTACAAGCCTACA 59.765 50.000 13.48 2.59 43.77 2.74
4665 6747 2.235402 TGGGTGTTAGCTACAAGCCTAC 59.765 50.000 18.97 4.10 43.77 3.18
4666 6748 2.500098 CTGGGTGTTAGCTACAAGCCTA 59.500 50.000 18.97 6.65 43.77 3.93
4667 6749 1.279271 CTGGGTGTTAGCTACAAGCCT 59.721 52.381 18.97 0.00 43.77 4.58
4668 6750 1.739067 CTGGGTGTTAGCTACAAGCC 58.261 55.000 13.76 13.76 43.77 4.35
4669 6751 1.087501 GCTGGGTGTTAGCTACAAGC 58.912 55.000 0.00 0.00 42.84 4.01
4917 7013 9.455847 GTTCAGGTCAAAGCATATGATTTTATC 57.544 33.333 16.03 9.29 30.39 1.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.