Multiple sequence alignment - TraesCS7D01G165600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G165600 chr7D 100.000 6055 0 0 1 6055 115094696 115100750 0.000000e+00 11182
1 TraesCS7D01G165600 chr7D 98.330 479 8 0 5577 6055 54583766 54583288 0.000000e+00 841
2 TraesCS7D01G165600 chr7A 91.574 3525 176 40 278 3745 119799023 119802483 0.000000e+00 4752
3 TraesCS7D01G165600 chr7A 88.378 1196 81 19 4222 5399 119813785 119814940 0.000000e+00 1386
4 TraesCS7D01G165600 chr7A 93.509 493 28 4 3741 4231 119813106 119813596 0.000000e+00 730
5 TraesCS7D01G165600 chr7A 94.007 267 14 1 7 273 119798472 119798736 2.630000e-108 403
6 TraesCS7D01G165600 chr7B 92.669 3233 166 32 279 3456 74665484 74668700 0.000000e+00 4591
7 TraesCS7D01G165600 chr7B 87.793 1237 65 26 4222 5415 74670142 74671335 0.000000e+00 1369
8 TraesCS7D01G165600 chr7B 90.809 544 45 4 3682 4224 74668700 74669239 0.000000e+00 723
9 TraesCS7D01G165600 chr7B 93.773 273 17 0 1 273 74664923 74665195 1.570000e-110 411
10 TraesCS7D01G165600 chr7B 87.151 358 17 9 4222 4551 74669511 74669867 4.430000e-101 379
11 TraesCS7D01G165600 chr7B 94.059 101 6 0 5454 5554 74673877 74673977 2.920000e-33 154
12 TraesCS7D01G165600 chr6D 98.760 484 6 0 5572 6055 51499459 51499942 0.000000e+00 861
13 TraesCS7D01G165600 chr5D 98.958 480 5 0 5576 6055 408335976 408335497 0.000000e+00 859
14 TraesCS7D01G165600 chr5D 98.539 479 7 0 5577 6055 75136832 75136354 0.000000e+00 846
15 TraesCS7D01G165600 chr5D 98.539 479 7 0 5577 6055 565815802 565816280 0.000000e+00 846
16 TraesCS7D01G165600 chr5D 98.333 480 8 0 5576 6055 260689963 260689484 0.000000e+00 843
17 TraesCS7D01G165600 chr5D 98.333 480 7 1 5576 6055 437207982 437208460 0.000000e+00 841
18 TraesCS7D01G165600 chr4D 98.542 480 7 0 5576 6055 164897179 164897658 0.000000e+00 848
19 TraesCS7D01G165600 chr3D 98.121 479 9 0 5577 6055 42349631 42350109 0.000000e+00 835
20 TraesCS7D01G165600 chr6A 84.239 552 43 15 3247 3770 383586356 383585821 1.170000e-136 497
21 TraesCS7D01G165600 chr6A 90.957 188 15 1 3888 4075 383581688 383581503 1.010000e-62 252
22 TraesCS7D01G165600 chr6A 85.987 157 21 1 4076 4231 383494404 383494248 3.750000e-37 167
23 TraesCS7D01G165600 chr6A 90.244 123 9 1 3773 3895 383582305 383582186 2.260000e-34 158


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G165600 chr7D 115094696 115100750 6054 False 11182.000000 11182 100.000000 1 6055 1 chr7D.!!$F1 6054
1 TraesCS7D01G165600 chr7A 119798472 119802483 4011 False 2577.500000 4752 92.790500 7 3745 2 chr7A.!!$F1 3738
2 TraesCS7D01G165600 chr7A 119813106 119814940 1834 False 1058.000000 1386 90.943500 3741 5399 2 chr7A.!!$F2 1658
3 TraesCS7D01G165600 chr7B 74664923 74673977 9054 False 1271.166667 4591 91.042333 1 5554 6 chr7B.!!$F1 5553
4 TraesCS7D01G165600 chr6A 383581503 383586356 4853 True 302.333333 497 88.480000 3247 4075 3 chr6A.!!$R2 828

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
582 893 0.392461 TCCTCCGCCACAAGCATAAC 60.392 55.000 0.00 0.0 44.04 1.89 F
1305 1652 0.107312 CATGGCTAGGTCTGCTTGCT 60.107 55.000 0.00 0.0 0.00 3.91 F
2195 2566 0.111061 TGGATGCTTCAGTGCCTGTT 59.889 50.000 1.64 0.0 32.61 3.16 F
3217 3591 1.207089 TGGGTCGCAATCAGGTTAGAG 59.793 52.381 0.00 0.0 0.00 2.43 F
4303 9012 0.250038 TCTCAATCAGGCCGCATAGC 60.250 55.000 0.00 0.0 0.00 2.97 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2195 2566 1.264749 AACATACCTCCTGCTCGGCA 61.265 55.0 0.0 0.0 36.92 5.69 R
3181 3555 0.323629 CCCAGAAGACGCCTTACCAA 59.676 55.0 0.0 0.0 31.62 3.67 R
3440 3839 0.316196 GTTGTGCAGAAGCGTGTCAC 60.316 55.0 0.0 0.0 46.23 3.67 R
4468 9836 0.391661 TTCATCGAGCAAGTCTGGCC 60.392 55.0 0.0 0.0 0.00 5.36 R
5680 13580 0.032815 CAACGGGCGATTTGGGTTTT 59.967 50.0 0.0 0.0 0.00 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
75 76 6.551736 ACTGCCGCTATTTGTTTACTTATTG 58.448 36.000 0.00 0.00 0.00 1.90
232 233 2.818169 GGTGCCTCCCTCACACACA 61.818 63.158 0.00 0.00 36.00 3.72
251 252 5.018809 ACACAAATGGGTCATGAAATAGCT 58.981 37.500 0.00 0.00 0.00 3.32
256 257 6.715347 AATGGGTCATGAAATAGCTAAACC 57.285 37.500 0.00 0.00 0.00 3.27
258 259 5.192927 TGGGTCATGAAATAGCTAAACCAG 58.807 41.667 0.00 0.00 0.00 4.00
273 274 0.546122 ACCAGTCAAACTCTGCACCA 59.454 50.000 0.00 0.00 0.00 4.17
275 276 1.334869 CCAGTCAAACTCTGCACCAAC 59.665 52.381 0.00 0.00 0.00 3.77
344 653 0.470766 TTTACACACGGACTGCCCTT 59.529 50.000 0.00 0.00 0.00 3.95
357 666 0.914417 TGCCCTTAGTTCCTCCCCAG 60.914 60.000 0.00 0.00 0.00 4.45
358 667 1.915983 CCCTTAGTTCCTCCCCAGC 59.084 63.158 0.00 0.00 0.00 4.85
366 675 4.729918 CCTCCCCAGCCACACTGC 62.730 72.222 0.00 0.00 45.78 4.40
372 681 2.567497 CCAGCCACACTGCCCAAAG 61.567 63.158 0.00 0.00 45.78 2.77
401 712 1.133025 AGCTTCGCAAACCATATGCAC 59.867 47.619 0.00 0.00 44.01 4.57
417 728 1.154282 CACAACATGCAGCAGAGCG 60.154 57.895 0.00 0.00 37.31 5.03
438 749 3.357079 GCAGGTTGCTGTCCACGG 61.357 66.667 0.00 0.00 40.96 4.94
452 763 2.415512 GTCCACGGATTCAGCAAACTAC 59.584 50.000 0.00 0.00 0.00 2.73
464 775 6.161855 TCAGCAAACTACGATATGATTCCT 57.838 37.500 0.00 0.00 0.00 3.36
517 828 2.615912 GGATCTGGCATGTTCTACAAGC 59.384 50.000 0.00 0.00 41.60 4.01
525 836 2.949177 TGTTCTACAAGCACCATGGT 57.051 45.000 13.00 13.00 0.00 3.55
552 863 2.110006 GGGGCGGATCTCTGAAGC 59.890 66.667 0.00 0.00 0.00 3.86
580 891 0.546122 ATTCCTCCGCCACAAGCATA 59.454 50.000 0.00 0.00 44.04 3.14
582 893 0.392461 TCCTCCGCCACAAGCATAAC 60.392 55.000 0.00 0.00 44.04 1.89
596 907 1.664629 CATAACTAGAGCGAGCGTCG 58.335 55.000 0.00 3.50 43.89 5.12
775 1104 1.080298 CGGAGTCGGATCGGATAGAG 58.920 60.000 6.23 0.00 0.00 2.43
831 1160 1.213013 CAGTGCGGACTCTAGCGTT 59.787 57.895 6.61 0.00 35.87 4.84
918 1247 4.238654 TCCACCGCGGAACCGTTT 62.239 61.111 35.90 3.57 42.52 3.60
920 1249 4.067016 CACCGCGGAACCGTTTCG 62.067 66.667 35.90 7.64 42.09 3.46
925 1254 3.419759 CGGAACCGTTTCGCCCAG 61.420 66.667 0.00 0.00 31.78 4.45
926 1255 2.281276 GGAACCGTTTCGCCCAGT 60.281 61.111 0.00 0.00 31.78 4.00
927 1256 1.004679 GGAACCGTTTCGCCCAGTA 60.005 57.895 0.00 0.00 31.78 2.74
928 1257 1.017701 GGAACCGTTTCGCCCAGTAG 61.018 60.000 0.00 0.00 31.78 2.57
937 1272 2.388232 CGCCCAGTAGCAACCGTTC 61.388 63.158 0.00 0.00 0.00 3.95
955 1290 2.460275 CGATCGCAATCCAACGGCA 61.460 57.895 0.26 0.00 0.00 5.69
1033 1369 1.838073 TTCAGCCGGGTCCTTTCCTC 61.838 60.000 1.27 0.00 0.00 3.71
1041 1377 1.553651 GGGTCCTTTCCTCACTCCTCT 60.554 57.143 0.00 0.00 0.00 3.69
1042 1378 1.828595 GGTCCTTTCCTCACTCCTCTC 59.171 57.143 0.00 0.00 0.00 3.20
1043 1379 1.474879 GTCCTTTCCTCACTCCTCTCG 59.525 57.143 0.00 0.00 0.00 4.04
1114 1450 2.444895 GCCTCCCTCTCCGTCCAT 60.445 66.667 0.00 0.00 0.00 3.41
1127 1473 0.605589 CGTCCATCTCCCTGCTATCC 59.394 60.000 0.00 0.00 0.00 2.59
1130 1476 0.833834 CCATCTCCCTGCTATCCGGT 60.834 60.000 0.00 0.00 0.00 5.28
1163 1509 0.541863 ATTGGACCCACTTCTAGCGG 59.458 55.000 0.00 0.00 0.00 5.52
1204 1550 1.055338 GGTACGTGTTTCTCGAACCG 58.945 55.000 0.00 0.00 37.45 4.44
1212 1558 3.365220 GTGTTTCTCGAACCGATTCTCTG 59.635 47.826 0.00 0.00 37.45 3.35
1258 1605 4.686554 CGGTTTGATTGTCTAGCCTATAGC 59.313 45.833 0.00 0.00 44.25 2.97
1305 1652 0.107312 CATGGCTAGGTCTGCTTGCT 60.107 55.000 0.00 0.00 0.00 3.91
1354 1701 6.717540 TGCTTTTAACCACTAAATTGGCTCTA 59.282 34.615 0.00 0.00 40.77 2.43
1384 1733 4.202245 GGAAAAGGTTCCCCAAAATAGC 57.798 45.455 0.00 0.00 46.84 2.97
1407 1756 5.607477 CGAGATACTCTAACAGAGACCTCT 58.393 45.833 10.09 8.01 45.07 3.69
1479 1828 1.153249 GCAATGGCAGCGTAGGGTA 60.153 57.895 0.00 0.00 40.72 3.69
1572 1921 4.092675 CGTCATTTTTGTTGCCTTGTGTTT 59.907 37.500 0.00 0.00 0.00 2.83
1574 1923 5.121454 GTCATTTTTGTTGCCTTGTGTTTGA 59.879 36.000 0.00 0.00 0.00 2.69
1630 1979 0.676466 TGAGCGGCATAGGGTTTGTG 60.676 55.000 1.45 0.00 0.00 3.33
1777 2146 4.531332 GACTGTGCATGTCAACTTTTCTC 58.469 43.478 15.10 0.00 34.80 2.87
1779 2148 4.274459 ACTGTGCATGTCAACTTTTCTCTC 59.726 41.667 0.00 0.00 0.00 3.20
1800 2169 5.356190 TCTCTTGAAATGTTGATGGCTCATC 59.644 40.000 7.90 7.90 40.88 2.92
1854 2223 7.283127 TGAATCAAGAAATCTAAGGGGAAATCG 59.717 37.037 0.00 0.00 0.00 3.34
1878 2247 7.763985 TCGTGATGAAAAATGAATAGCTGTAGA 59.236 33.333 0.00 0.00 0.00 2.59
1879 2248 7.848051 CGTGATGAAAAATGAATAGCTGTAGAC 59.152 37.037 0.00 0.00 0.00 2.59
1880 2249 8.887717 GTGATGAAAAATGAATAGCTGTAGACT 58.112 33.333 0.00 0.00 0.00 3.24
1881 2250 8.886719 TGATGAAAAATGAATAGCTGTAGACTG 58.113 33.333 0.00 0.00 0.00 3.51
1882 2251 8.798859 ATGAAAAATGAATAGCTGTAGACTGT 57.201 30.769 0.00 0.00 0.00 3.55
1883 2252 9.890629 ATGAAAAATGAATAGCTGTAGACTGTA 57.109 29.630 0.00 0.00 0.00 2.74
1884 2253 9.371136 TGAAAAATGAATAGCTGTAGACTGTAG 57.629 33.333 0.00 0.00 0.00 2.74
1885 2254 9.372369 GAAAAATGAATAGCTGTAGACTGTAGT 57.628 33.333 0.00 0.00 0.00 2.73
1886 2255 8.934507 AAAATGAATAGCTGTAGACTGTAGTC 57.065 34.615 0.00 3.85 45.08 2.59
1972 2341 9.414295 CTCATTTGTTCAGCATTTCAAATCTTA 57.586 29.630 0.00 0.00 38.08 2.10
2001 2370 6.646240 TCATGGAAATAAAAGAAACTGCAAGC 59.354 34.615 0.00 0.00 37.60 4.01
2007 2376 6.830873 ATAAAAGAAACTGCAAGCTCATCT 57.169 33.333 0.00 0.00 37.60 2.90
2010 2379 2.305343 AGAAACTGCAAGCTCATCTCCT 59.695 45.455 0.00 0.00 37.60 3.69
2097 2468 6.248569 AGTCTTGACACTTTCCCTCTTTTA 57.751 37.500 3.49 0.00 0.00 1.52
2125 2496 7.360438 GCTGAGCTATCCAAAGTTTATTATCCG 60.360 40.741 0.00 0.00 0.00 4.18
2138 2509 3.764885 ATTATCCGTTGCTTGCTCAAC 57.235 42.857 6.89 6.89 42.04 3.18
2195 2566 0.111061 TGGATGCTTCAGTGCCTGTT 59.889 50.000 1.64 0.00 32.61 3.16
2275 2646 9.320352 GATTCCTAGATTACTTTTGAGTCTTCC 57.680 37.037 0.00 0.00 0.00 3.46
2283 2654 7.849804 TTACTTTTGAGTCTTCCATCTATGC 57.150 36.000 0.00 0.00 0.00 3.14
2321 2692 7.843482 TGTAGTTTAAAACTGTACATGACACG 58.157 34.615 0.00 0.00 42.84 4.49
2324 2695 7.844482 AGTTTAAAACTGTACATGACACGTAC 58.156 34.615 4.88 4.88 41.01 3.67
2338 2709 4.142643 TGACACGTACGTTATACATGCTCA 60.143 41.667 20.23 9.04 0.00 4.26
2370 2741 1.771255 GGCAGGTACCCTCAATCTCAT 59.229 52.381 8.74 0.00 0.00 2.90
2485 2857 2.764010 TCGTATTGCAGGATGGTACTGT 59.236 45.455 0.00 0.00 38.22 3.55
2510 2882 2.951229 TCTTGGGTGGGAAGAAAGTC 57.049 50.000 0.00 0.00 0.00 3.01
3165 3539 6.240894 TCCTGAGTTTGTGCTATTCTTTGAT 58.759 36.000 0.00 0.00 0.00 2.57
3181 3555 6.179906 TCTTTGATTGTTCTGAGGAAGAGT 57.820 37.500 0.00 0.00 35.91 3.24
3217 3591 1.207089 TGGGTCGCAATCAGGTTAGAG 59.793 52.381 0.00 0.00 0.00 2.43
3287 3661 7.867403 TCTTCATTGCTTCTAACATTGTTTTCC 59.133 33.333 7.45 0.00 0.00 3.13
3351 3742 8.138928 TGAGACTATCAGGAAAAGATTCAGAA 57.861 34.615 0.00 0.00 33.08 3.02
3512 3913 7.715249 ACTCGTTGTGATTTATAATAGGCACAT 59.285 33.333 0.00 0.00 36.32 3.21
3513 3914 9.203421 CTCGTTGTGATTTATAATAGGCACATA 57.797 33.333 0.00 0.00 36.32 2.29
3598 4007 1.894699 AGGCTAGGTTAAGAAGGGGG 58.105 55.000 0.00 0.00 0.00 5.40
3661 4070 5.239525 AGAACAGTTCATTGTTAACAGCCTC 59.760 40.000 15.85 0.83 41.15 4.70
3868 7793 2.301583 TGCCACACAACAGAGCATACTA 59.698 45.455 0.00 0.00 0.00 1.82
3959 8389 4.096732 AGCGAACAAATAGGTGCATTTC 57.903 40.909 0.00 0.00 0.00 2.17
3965 8395 7.081349 CGAACAAATAGGTGCATTTCTACAAA 58.919 34.615 0.00 0.00 0.00 2.83
3971 8401 3.440173 AGGTGCATTTCTACAAACCGATG 59.560 43.478 0.00 0.00 32.83 3.84
3978 8408 7.094592 TGCATTTCTACAAACCGATGTATCAAA 60.095 33.333 0.00 0.00 35.37 2.69
3979 8409 7.753132 GCATTTCTACAAACCGATGTATCAAAA 59.247 33.333 0.00 0.00 35.37 2.44
4015 8445 7.230510 TGTCAGGACTTTATTTTTGTGTATGCT 59.769 33.333 0.65 0.00 0.00 3.79
4054 8484 6.524734 TGGTTGATATGCTTTCTCGATGTAT 58.475 36.000 0.00 0.00 0.00 2.29
4154 8584 5.835280 AGATGTGAAAACCATTTTCCAGTCT 59.165 36.000 10.66 8.25 46.49 3.24
4200 8630 9.573133 CATTTCATACCCAATTGACTAAGTTTC 57.427 33.333 7.12 0.00 0.00 2.78
4203 8633 7.335627 TCATACCCAATTGACTAAGTTTCGAT 58.664 34.615 7.12 0.00 0.00 3.59
4269 8978 3.380004 ACAGACCGTCTTTTTGCAAATGA 59.620 39.130 13.65 11.58 0.00 2.57
4303 9012 0.250038 TCTCAATCAGGCCGCATAGC 60.250 55.000 0.00 0.00 0.00 2.97
4328 9040 4.657055 TCATGCGAAAAATATGTGGTTCG 58.343 39.130 0.00 0.00 44.29 3.95
4513 9881 1.193203 CTGTTACTGCTGCTGTTGTCG 59.807 52.381 17.29 1.68 0.00 4.35
4561 9929 0.184933 TGTTTTCAGGTGACCCCAGG 59.815 55.000 0.00 0.00 34.66 4.45
4858 10244 5.791974 CGTTTGTGATTCAGTAGCAATTCTG 59.208 40.000 0.00 0.00 0.00 3.02
4879 10265 2.299013 GTTTGGCCTTCGGGAAAAGATT 59.701 45.455 3.32 0.00 37.25 2.40
4881 10267 0.173481 GGCCTTCGGGAAAAGATTGC 59.827 55.000 0.00 0.00 37.25 3.56
4882 10268 0.887933 GCCTTCGGGAAAAGATTGCA 59.112 50.000 0.00 0.00 37.25 4.08
4961 10357 1.337260 GGCTGATATCACAGTAGCGGG 60.337 57.143 0.00 0.00 39.73 6.13
4962 10358 1.937108 GCTGATATCACAGTAGCGGGC 60.937 57.143 0.00 0.00 39.73 6.13
4963 10359 1.341209 CTGATATCACAGTAGCGGGCA 59.659 52.381 0.00 0.00 33.73 5.36
4966 10362 3.181455 TGATATCACAGTAGCGGGCATTT 60.181 43.478 0.00 0.00 0.00 2.32
4967 10363 1.668419 ATCACAGTAGCGGGCATTTC 58.332 50.000 0.00 0.00 0.00 2.17
4968 10364 0.323302 TCACAGTAGCGGGCATTTCA 59.677 50.000 0.00 0.00 0.00 2.69
4969 10365 0.729116 CACAGTAGCGGGCATTTCAG 59.271 55.000 0.00 0.00 0.00 3.02
4970 10366 0.613260 ACAGTAGCGGGCATTTCAGA 59.387 50.000 0.00 0.00 0.00 3.27
4971 10367 1.009829 CAGTAGCGGGCATTTCAGAC 58.990 55.000 0.00 0.00 0.00 3.51
4975 10371 1.327303 AGCGGGCATTTCAGACAAAA 58.673 45.000 0.00 0.00 0.00 2.44
4998 10394 4.735369 TGGTTATTTGTCCACAAGGTGAT 58.265 39.130 0.00 0.00 37.15 3.06
5055 10451 8.696374 TGTCAGTTGATAAAATACCCAAAAACA 58.304 29.630 0.00 0.00 0.00 2.83
5210 10607 1.333619 AGGATCACAACGTTGCAACAC 59.666 47.619 27.61 15.23 0.00 3.32
5224 10621 0.030504 CAACACGCAAGAATGTGGCA 59.969 50.000 0.00 0.00 41.45 4.92
5315 10712 5.642686 TGTATTTGCGCCAAAATACTTACC 58.357 37.500 28.80 13.72 46.35 2.85
5410 10807 3.555139 CGCCAATTTTTGCTTGTCTTTCA 59.445 39.130 0.00 0.00 0.00 2.69
5433 10973 6.706270 TCAGTTAGAACTTTAGAGCCAAACAG 59.294 38.462 0.00 0.00 37.08 3.16
5450 10990 0.321671 CAGGGAAGAACTTGGAGCGA 59.678 55.000 0.00 0.00 0.00 4.93
5466 13366 5.554822 GGAGCGATTCCAGATAGTACTAG 57.445 47.826 8.85 0.00 46.01 2.57
5467 13367 5.005094 GGAGCGATTCCAGATAGTACTAGT 58.995 45.833 8.85 0.00 46.01 2.57
5473 13373 7.573469 GCGATTCCAGATAGTACTAGTGTAAGG 60.573 44.444 5.39 4.82 0.00 2.69
5537 13437 2.606272 CGCTGAACCGGTAAATAAGACC 59.394 50.000 8.00 0.00 0.00 3.85
5542 13442 4.529377 TGAACCGGTAAATAAGACCTGAGT 59.471 41.667 8.00 0.00 34.56 3.41
5561 13461 3.744660 AGTTAACTGAACTTGAGCCAGG 58.255 45.455 7.48 0.00 46.79 4.45
5562 13462 3.136626 AGTTAACTGAACTTGAGCCAGGT 59.863 43.478 7.48 0.00 46.79 4.00
5563 13463 1.972872 AACTGAACTTGAGCCAGGTG 58.027 50.000 0.00 0.00 32.52 4.00
5564 13464 0.839946 ACTGAACTTGAGCCAGGTGT 59.160 50.000 0.00 0.00 32.52 4.16
5565 13465 1.202698 ACTGAACTTGAGCCAGGTGTC 60.203 52.381 0.00 0.00 32.52 3.67
5566 13466 0.108585 TGAACTTGAGCCAGGTGTCC 59.891 55.000 0.00 0.00 0.00 4.02
5567 13467 0.108585 GAACTTGAGCCAGGTGTCCA 59.891 55.000 0.00 0.00 0.00 4.02
5568 13468 0.550914 AACTTGAGCCAGGTGTCCAA 59.449 50.000 0.00 0.00 0.00 3.53
5569 13469 0.550914 ACTTGAGCCAGGTGTCCAAA 59.449 50.000 0.00 0.00 0.00 3.28
5570 13470 1.145738 ACTTGAGCCAGGTGTCCAAAT 59.854 47.619 0.00 0.00 0.00 2.32
5571 13471 2.375174 ACTTGAGCCAGGTGTCCAAATA 59.625 45.455 0.00 0.00 0.00 1.40
5572 13472 3.010584 ACTTGAGCCAGGTGTCCAAATAT 59.989 43.478 0.00 0.00 0.00 1.28
5573 13473 3.737559 TGAGCCAGGTGTCCAAATATT 57.262 42.857 0.00 0.00 0.00 1.28
5574 13474 3.620488 TGAGCCAGGTGTCCAAATATTC 58.380 45.455 0.00 0.00 0.00 1.75
5575 13475 3.010027 TGAGCCAGGTGTCCAAATATTCA 59.990 43.478 0.00 0.00 0.00 2.57
5576 13476 3.624777 AGCCAGGTGTCCAAATATTCAG 58.375 45.455 0.00 0.00 0.00 3.02
5577 13477 3.266772 AGCCAGGTGTCCAAATATTCAGA 59.733 43.478 0.00 0.00 0.00 3.27
5578 13478 3.629398 GCCAGGTGTCCAAATATTCAGAG 59.371 47.826 0.00 0.00 0.00 3.35
5579 13479 4.848357 CCAGGTGTCCAAATATTCAGAGT 58.152 43.478 0.00 0.00 0.00 3.24
5580 13480 5.629133 GCCAGGTGTCCAAATATTCAGAGTA 60.629 44.000 0.00 0.00 0.00 2.59
5581 13481 6.414732 CCAGGTGTCCAAATATTCAGAGTAA 58.585 40.000 0.00 0.00 0.00 2.24
5582 13482 6.884295 CCAGGTGTCCAAATATTCAGAGTAAA 59.116 38.462 0.00 0.00 0.00 2.01
5583 13483 7.557719 CCAGGTGTCCAAATATTCAGAGTAAAT 59.442 37.037 0.00 0.00 0.00 1.40
5584 13484 9.613428 CAGGTGTCCAAATATTCAGAGTAAATA 57.387 33.333 0.00 0.00 0.00 1.40
5585 13485 9.838339 AGGTGTCCAAATATTCAGAGTAAATAG 57.162 33.333 0.00 0.00 0.00 1.73
5586 13486 8.560374 GGTGTCCAAATATTCAGAGTAAATAGC 58.440 37.037 0.00 0.00 0.00 2.97
5587 13487 9.109393 GTGTCCAAATATTCAGAGTAAATAGCA 57.891 33.333 0.00 0.00 0.00 3.49
5588 13488 9.851686 TGTCCAAATATTCAGAGTAAATAGCAT 57.148 29.630 0.00 0.00 0.00 3.79
5599 13499 9.595823 TCAGAGTAAATAGCATAAAACTACCAC 57.404 33.333 0.00 0.00 0.00 4.16
5600 13500 9.601217 CAGAGTAAATAGCATAAAACTACCACT 57.399 33.333 0.00 0.00 0.00 4.00
5606 13506 7.916914 ATAGCATAAAACTACCACTTTTCGT 57.083 32.000 0.00 0.00 0.00 3.85
5607 13507 6.237313 AGCATAAAACTACCACTTTTCGTC 57.763 37.500 0.00 0.00 0.00 4.20
5608 13508 5.180680 AGCATAAAACTACCACTTTTCGTCC 59.819 40.000 0.00 0.00 0.00 4.79
5609 13509 5.180680 GCATAAAACTACCACTTTTCGTCCT 59.819 40.000 0.00 0.00 0.00 3.85
5610 13510 6.369615 GCATAAAACTACCACTTTTCGTCCTA 59.630 38.462 0.00 0.00 0.00 2.94
5611 13511 7.065443 GCATAAAACTACCACTTTTCGTCCTAT 59.935 37.037 0.00 0.00 0.00 2.57
5612 13512 6.796705 AAAACTACCACTTTTCGTCCTATG 57.203 37.500 0.00 0.00 0.00 2.23
5613 13513 4.467198 ACTACCACTTTTCGTCCTATGG 57.533 45.455 0.00 0.00 0.00 2.74
5614 13514 3.836562 ACTACCACTTTTCGTCCTATGGT 59.163 43.478 8.15 8.15 42.90 3.55
5615 13515 3.782656 ACCACTTTTCGTCCTATGGTT 57.217 42.857 0.00 0.00 37.12 3.67
5616 13516 3.671716 ACCACTTTTCGTCCTATGGTTC 58.328 45.455 0.00 0.00 37.12 3.62
5617 13517 3.007635 CCACTTTTCGTCCTATGGTTCC 58.992 50.000 0.00 0.00 0.00 3.62
5618 13518 3.558321 CCACTTTTCGTCCTATGGTTCCA 60.558 47.826 0.00 0.00 0.00 3.53
5619 13519 4.069304 CACTTTTCGTCCTATGGTTCCAA 58.931 43.478 0.00 0.00 0.00 3.53
5620 13520 4.517453 CACTTTTCGTCCTATGGTTCCAAA 59.483 41.667 0.00 0.00 0.00 3.28
5621 13521 5.009210 CACTTTTCGTCCTATGGTTCCAAAA 59.991 40.000 0.00 0.00 0.00 2.44
5622 13522 5.595133 ACTTTTCGTCCTATGGTTCCAAAAA 59.405 36.000 0.00 0.00 0.00 1.94
5656 13556 6.870971 TTTTGTTTGTGACTGATACCTACC 57.129 37.500 0.00 0.00 0.00 3.18
5657 13557 5.554437 TTGTTTGTGACTGATACCTACCA 57.446 39.130 0.00 0.00 0.00 3.25
5658 13558 4.890088 TGTTTGTGACTGATACCTACCAC 58.110 43.478 0.00 0.00 0.00 4.16
5659 13559 4.591498 TGTTTGTGACTGATACCTACCACT 59.409 41.667 0.00 0.00 0.00 4.00
5660 13560 5.071250 TGTTTGTGACTGATACCTACCACTT 59.929 40.000 0.00 0.00 0.00 3.16
5661 13561 5.818678 TTGTGACTGATACCTACCACTTT 57.181 39.130 0.00 0.00 0.00 2.66
5662 13562 5.818678 TGTGACTGATACCTACCACTTTT 57.181 39.130 0.00 0.00 0.00 2.27
5663 13563 6.182507 TGTGACTGATACCTACCACTTTTT 57.817 37.500 0.00 0.00 0.00 1.94
5681 13581 4.681835 TTTTTCGTCGGTTGTCTCAAAA 57.318 36.364 0.00 0.00 0.00 2.44
5682 13582 4.681835 TTTTCGTCGGTTGTCTCAAAAA 57.318 36.364 0.00 0.00 0.00 1.94
5697 13597 2.432119 AAAAACCCAAATCGCCCGT 58.568 47.368 0.00 0.00 0.00 5.28
5698 13598 0.753867 AAAAACCCAAATCGCCCGTT 59.246 45.000 0.00 0.00 0.00 4.44
5699 13599 0.032815 AAAACCCAAATCGCCCGTTG 59.967 50.000 0.00 0.00 0.00 4.10
5700 13600 2.428960 AAACCCAAATCGCCCGTTGC 62.429 55.000 0.00 0.00 0.00 4.17
5701 13601 3.061848 CCCAAATCGCCCGTTGCT 61.062 61.111 0.00 0.00 38.05 3.91
5702 13602 1.747367 CCCAAATCGCCCGTTGCTA 60.747 57.895 0.00 0.00 38.05 3.49
5703 13603 1.714899 CCCAAATCGCCCGTTGCTAG 61.715 60.000 0.00 0.00 38.05 3.42
5704 13604 1.062525 CAAATCGCCCGTTGCTAGC 59.937 57.895 8.10 8.10 38.05 3.42
5708 13608 3.419759 CGCCCGTTGCTAGCGTTT 61.420 61.111 10.77 0.00 44.65 3.60
5709 13609 2.951458 GCCCGTTGCTAGCGTTTT 59.049 55.556 10.77 0.00 36.87 2.43
5710 13610 1.628447 CGCCCGTTGCTAGCGTTTTA 61.628 55.000 10.77 0.00 44.65 1.52
5711 13611 0.518195 GCCCGTTGCTAGCGTTTTAA 59.482 50.000 10.77 0.00 36.87 1.52
5712 13612 1.069091 GCCCGTTGCTAGCGTTTTAAA 60.069 47.619 10.77 0.00 36.87 1.52
5713 13613 2.577450 CCCGTTGCTAGCGTTTTAAAC 58.423 47.619 10.77 6.76 0.00 2.01
5714 13614 2.577450 CCGTTGCTAGCGTTTTAAACC 58.423 47.619 10.77 0.00 0.00 3.27
5715 13615 2.227556 CGTTGCTAGCGTTTTAAACCG 58.772 47.619 10.77 0.15 0.00 4.44
5716 13616 2.348779 CGTTGCTAGCGTTTTAAACCGT 60.349 45.455 10.77 0.00 0.00 4.83
5717 13617 3.620761 GTTGCTAGCGTTTTAAACCGTT 58.379 40.909 10.77 3.39 0.00 4.44
5718 13618 3.967203 TGCTAGCGTTTTAAACCGTTT 57.033 38.095 10.77 1.40 0.00 3.60
5719 13619 4.290104 TGCTAGCGTTTTAAACCGTTTT 57.710 36.364 10.77 0.00 0.00 2.43
5720 13620 4.281264 TGCTAGCGTTTTAAACCGTTTTC 58.719 39.130 10.77 0.00 0.00 2.29
5721 13621 4.035441 TGCTAGCGTTTTAAACCGTTTTCT 59.965 37.500 10.77 0.00 0.00 2.52
5722 13622 4.377738 GCTAGCGTTTTAAACCGTTTTCTG 59.622 41.667 7.01 0.00 0.00 3.02
5723 13623 4.619437 AGCGTTTTAAACCGTTTTCTGA 57.381 36.364 7.01 0.00 0.00 3.27
5724 13624 4.345288 AGCGTTTTAAACCGTTTTCTGAC 58.655 39.130 7.01 0.00 0.00 3.51
5725 13625 3.176287 GCGTTTTAAACCGTTTTCTGACG 59.824 43.478 7.01 9.04 42.43 4.35
5731 13631 3.545911 CGTTTTCTGACGGTCCGG 58.454 61.111 17.28 0.00 39.27 5.14
5732 13632 2.025418 CGTTTTCTGACGGTCCGGG 61.025 63.158 17.28 5.54 39.27 5.73
5733 13633 2.031465 TTTTCTGACGGTCCGGGC 59.969 61.111 17.28 0.00 0.00 6.13
5734 13634 3.540367 TTTTCTGACGGTCCGGGCC 62.540 63.158 17.58 17.58 0.00 5.80
5754 13654 2.047844 CCTGTCAGGCCACGTCAG 60.048 66.667 5.79 8.97 0.00 3.51
5755 13655 2.740055 CTGTCAGGCCACGTCAGC 60.740 66.667 5.01 0.00 0.00 4.26
5756 13656 4.662961 TGTCAGGCCACGTCAGCG 62.663 66.667 5.01 0.00 44.93 5.18
5840 13740 4.094684 GCTCGTGCGCTCATTACT 57.905 55.556 9.73 0.00 0.00 2.24
5841 13741 1.920762 GCTCGTGCGCTCATTACTC 59.079 57.895 9.73 0.00 0.00 2.59
5842 13742 0.526524 GCTCGTGCGCTCATTACTCT 60.527 55.000 9.73 0.00 0.00 3.24
5843 13743 1.195347 CTCGTGCGCTCATTACTCTG 58.805 55.000 9.73 0.00 0.00 3.35
5844 13744 0.802222 TCGTGCGCTCATTACTCTGC 60.802 55.000 9.73 0.00 0.00 4.26
5845 13745 0.803768 CGTGCGCTCATTACTCTGCT 60.804 55.000 9.73 0.00 0.00 4.24
5846 13746 0.926846 GTGCGCTCATTACTCTGCTC 59.073 55.000 9.73 0.00 0.00 4.26
5847 13747 0.179100 TGCGCTCATTACTCTGCTCC 60.179 55.000 9.73 0.00 0.00 4.70
5848 13748 0.878086 GCGCTCATTACTCTGCTCCC 60.878 60.000 0.00 0.00 0.00 4.30
5849 13749 0.249657 CGCTCATTACTCTGCTCCCC 60.250 60.000 0.00 0.00 0.00 4.81
5850 13750 1.127343 GCTCATTACTCTGCTCCCCT 58.873 55.000 0.00 0.00 0.00 4.79
5851 13751 1.202627 GCTCATTACTCTGCTCCCCTG 60.203 57.143 0.00 0.00 0.00 4.45
5852 13752 0.833287 TCATTACTCTGCTCCCCTGC 59.167 55.000 0.00 0.00 0.00 4.85
5853 13753 0.179034 CATTACTCTGCTCCCCTGCC 60.179 60.000 0.00 0.00 0.00 4.85
5854 13754 1.348775 ATTACTCTGCTCCCCTGCCC 61.349 60.000 0.00 0.00 0.00 5.36
5855 13755 2.477190 TTACTCTGCTCCCCTGCCCT 62.477 60.000 0.00 0.00 0.00 5.19
5856 13756 2.880629 TACTCTGCTCCCCTGCCCTC 62.881 65.000 0.00 0.00 0.00 4.30
5857 13757 4.337304 TCTGCTCCCCTGCCCTCA 62.337 66.667 0.00 0.00 0.00 3.86
5858 13758 4.106925 CTGCTCCCCTGCCCTCAC 62.107 72.222 0.00 0.00 0.00 3.51
5859 13759 4.664267 TGCTCCCCTGCCCTCACT 62.664 66.667 0.00 0.00 0.00 3.41
5860 13760 3.791586 GCTCCCCTGCCCTCACTC 61.792 72.222 0.00 0.00 0.00 3.51
5861 13761 2.040278 CTCCCCTGCCCTCACTCT 59.960 66.667 0.00 0.00 0.00 3.24
5862 13762 2.039624 TCCCCTGCCCTCACTCTC 59.960 66.667 0.00 0.00 0.00 3.20
5863 13763 2.284921 CCCCTGCCCTCACTCTCA 60.285 66.667 0.00 0.00 0.00 3.27
5864 13764 2.664081 CCCCTGCCCTCACTCTCAC 61.664 68.421 0.00 0.00 0.00 3.51
5865 13765 1.611851 CCCTGCCCTCACTCTCACT 60.612 63.158 0.00 0.00 0.00 3.41
5866 13766 1.612395 CCCTGCCCTCACTCTCACTC 61.612 65.000 0.00 0.00 0.00 3.51
5867 13767 0.614415 CCTGCCCTCACTCTCACTCT 60.614 60.000 0.00 0.00 0.00 3.24
5868 13768 0.817013 CTGCCCTCACTCTCACTCTC 59.183 60.000 0.00 0.00 0.00 3.20
5869 13769 0.407528 TGCCCTCACTCTCACTCTCT 59.592 55.000 0.00 0.00 0.00 3.10
5870 13770 1.102978 GCCCTCACTCTCACTCTCTC 58.897 60.000 0.00 0.00 0.00 3.20
5871 13771 1.762708 CCCTCACTCTCACTCTCTCC 58.237 60.000 0.00 0.00 0.00 3.71
5872 13772 1.684869 CCCTCACTCTCACTCTCTCCC 60.685 61.905 0.00 0.00 0.00 4.30
5873 13773 1.684869 CCTCACTCTCACTCTCTCCCC 60.685 61.905 0.00 0.00 0.00 4.81
5874 13774 1.284785 CTCACTCTCACTCTCTCCCCT 59.715 57.143 0.00 0.00 0.00 4.79
5875 13775 1.005332 TCACTCTCACTCTCTCCCCTG 59.995 57.143 0.00 0.00 0.00 4.45
5876 13776 0.324275 ACTCTCACTCTCTCCCCTGC 60.324 60.000 0.00 0.00 0.00 4.85
5877 13777 1.000993 TCTCACTCTCTCCCCTGCC 59.999 63.158 0.00 0.00 0.00 4.85
5878 13778 2.039624 TCACTCTCTCCCCTGCCC 59.960 66.667 0.00 0.00 0.00 5.36
5879 13779 3.465403 CACTCTCTCCCCTGCCCG 61.465 72.222 0.00 0.00 0.00 6.13
5887 13787 4.431131 CCCCTGCCCGCACTCATT 62.431 66.667 0.00 0.00 0.00 2.57
5888 13788 2.825836 CCCTGCCCGCACTCATTC 60.826 66.667 0.00 0.00 0.00 2.67
5889 13789 2.825836 CCTGCCCGCACTCATTCC 60.826 66.667 0.00 0.00 0.00 3.01
5890 13790 2.270205 CTGCCCGCACTCATTCCT 59.730 61.111 0.00 0.00 0.00 3.36
5891 13791 1.817099 CTGCCCGCACTCATTCCTC 60.817 63.158 0.00 0.00 0.00 3.71
5892 13792 2.249413 CTGCCCGCACTCATTCCTCT 62.249 60.000 0.00 0.00 0.00 3.69
5893 13793 1.817099 GCCCGCACTCATTCCTCTG 60.817 63.158 0.00 0.00 0.00 3.35
5894 13794 1.817099 CCCGCACTCATTCCTCTGC 60.817 63.158 0.00 0.00 0.00 4.26
5895 13795 1.220206 CCGCACTCATTCCTCTGCT 59.780 57.895 0.00 0.00 0.00 4.24
5896 13796 0.809241 CCGCACTCATTCCTCTGCTC 60.809 60.000 0.00 0.00 0.00 4.26
5897 13797 0.175302 CGCACTCATTCCTCTGCTCT 59.825 55.000 0.00 0.00 0.00 4.09
5898 13798 1.802136 CGCACTCATTCCTCTGCTCTC 60.802 57.143 0.00 0.00 0.00 3.20
5899 13799 1.206610 GCACTCATTCCTCTGCTCTCA 59.793 52.381 0.00 0.00 0.00 3.27
5900 13800 2.891112 CACTCATTCCTCTGCTCTCAC 58.109 52.381 0.00 0.00 0.00 3.51
5901 13801 2.496871 CACTCATTCCTCTGCTCTCACT 59.503 50.000 0.00 0.00 0.00 3.41
5902 13802 2.760092 ACTCATTCCTCTGCTCTCACTC 59.240 50.000 0.00 0.00 0.00 3.51
5903 13803 3.025978 CTCATTCCTCTGCTCTCACTCT 58.974 50.000 0.00 0.00 0.00 3.24
5904 13804 3.023119 TCATTCCTCTGCTCTCACTCTC 58.977 50.000 0.00 0.00 0.00 3.20
5905 13805 2.593925 TTCCTCTGCTCTCACTCTCA 57.406 50.000 0.00 0.00 0.00 3.27
5906 13806 1.832883 TCCTCTGCTCTCACTCTCAC 58.167 55.000 0.00 0.00 0.00 3.51
5907 13807 1.354031 TCCTCTGCTCTCACTCTCACT 59.646 52.381 0.00 0.00 0.00 3.41
5908 13808 1.745087 CCTCTGCTCTCACTCTCACTC 59.255 57.143 0.00 0.00 0.00 3.51
5909 13809 2.618816 CCTCTGCTCTCACTCTCACTCT 60.619 54.545 0.00 0.00 0.00 3.24
5910 13810 2.679837 CTCTGCTCTCACTCTCACTCTC 59.320 54.545 0.00 0.00 0.00 3.20
5911 13811 2.305635 TCTGCTCTCACTCTCACTCTCT 59.694 50.000 0.00 0.00 0.00 3.10
5912 13812 2.679837 CTGCTCTCACTCTCACTCTCTC 59.320 54.545 0.00 0.00 0.00 3.20
5913 13813 1.665679 GCTCTCACTCTCACTCTCTCG 59.334 57.143 0.00 0.00 0.00 4.04
5914 13814 1.665679 CTCTCACTCTCACTCTCTCGC 59.334 57.143 0.00 0.00 0.00 5.03
5915 13815 1.277842 TCTCACTCTCACTCTCTCGCT 59.722 52.381 0.00 0.00 0.00 4.93
5916 13816 1.665679 CTCACTCTCACTCTCTCGCTC 59.334 57.143 0.00 0.00 0.00 5.03
5917 13817 0.732571 CACTCTCACTCTCTCGCTCC 59.267 60.000 0.00 0.00 0.00 4.70
5918 13818 0.618458 ACTCTCACTCTCTCGCTCCT 59.382 55.000 0.00 0.00 0.00 3.69
5919 13819 1.299541 CTCTCACTCTCTCGCTCCTC 58.700 60.000 0.00 0.00 0.00 3.71
5920 13820 0.908910 TCTCACTCTCTCGCTCCTCT 59.091 55.000 0.00 0.00 0.00 3.69
5921 13821 1.134521 TCTCACTCTCTCGCTCCTCTC 60.135 57.143 0.00 0.00 0.00 3.20
5922 13822 0.107410 TCACTCTCTCGCTCCTCTCC 60.107 60.000 0.00 0.00 0.00 3.71
5923 13823 0.107214 CACTCTCTCGCTCCTCTCCT 60.107 60.000 0.00 0.00 0.00 3.69
5924 13824 0.180406 ACTCTCTCGCTCCTCTCCTC 59.820 60.000 0.00 0.00 0.00 3.71
5925 13825 0.469917 CTCTCTCGCTCCTCTCCTCT 59.530 60.000 0.00 0.00 0.00 3.69
5926 13826 0.468226 TCTCTCGCTCCTCTCCTCTC 59.532 60.000 0.00 0.00 0.00 3.20
5927 13827 0.469917 CTCTCGCTCCTCTCCTCTCT 59.530 60.000 0.00 0.00 0.00 3.10
5928 13828 0.180171 TCTCGCTCCTCTCCTCTCTG 59.820 60.000 0.00 0.00 0.00 3.35
5929 13829 1.447317 CTCGCTCCTCTCCTCTCTGC 61.447 65.000 0.00 0.00 0.00 4.26
5930 13830 1.453745 CGCTCCTCTCCTCTCTGCT 60.454 63.158 0.00 0.00 0.00 4.24
5931 13831 1.447317 CGCTCCTCTCCTCTCTGCTC 61.447 65.000 0.00 0.00 0.00 4.26
5932 13832 0.106519 GCTCCTCTCCTCTCTGCTCT 60.107 60.000 0.00 0.00 0.00 4.09
5933 13833 1.686115 GCTCCTCTCCTCTCTGCTCTT 60.686 57.143 0.00 0.00 0.00 2.85
5934 13834 2.301346 CTCCTCTCCTCTCTGCTCTTC 58.699 57.143 0.00 0.00 0.00 2.87
5935 13835 1.024271 CCTCTCCTCTCTGCTCTTCG 58.976 60.000 0.00 0.00 0.00 3.79
5936 13836 1.408127 CCTCTCCTCTCTGCTCTTCGA 60.408 57.143 0.00 0.00 0.00 3.71
5937 13837 1.670811 CTCTCCTCTCTGCTCTTCGAC 59.329 57.143 0.00 0.00 0.00 4.20
5938 13838 0.376852 CTCCTCTCTGCTCTTCGACG 59.623 60.000 0.00 0.00 0.00 5.12
5939 13839 1.226547 CCTCTCTGCTCTTCGACGC 60.227 63.158 0.00 0.00 0.00 5.19
5940 13840 1.226547 CTCTCTGCTCTTCGACGCC 60.227 63.158 0.00 0.00 0.00 5.68
5941 13841 2.578178 CTCTGCTCTTCGACGCCG 60.578 66.667 0.00 0.00 37.07 6.46
5942 13842 4.116328 TCTGCTCTTCGACGCCGG 62.116 66.667 0.00 0.00 36.24 6.13
5989 13889 4.113815 CCGCCATGCCTTCCTGGA 62.114 66.667 0.00 0.00 38.35 3.86
5990 13890 2.045045 CGCCATGCCTTCCTGGAA 60.045 61.111 9.14 9.14 38.35 3.53
5991 13891 1.454479 CGCCATGCCTTCCTGGAAT 60.454 57.895 10.03 0.00 38.35 3.01
5995 13895 3.483954 ATGCCTTCCTGGAATGACG 57.516 52.632 14.88 1.52 38.35 4.35
5996 13896 0.107017 ATGCCTTCCTGGAATGACGG 60.107 55.000 14.88 11.23 38.35 4.79
5997 13897 1.452108 GCCTTCCTGGAATGACGGG 60.452 63.158 14.88 10.89 38.35 5.28
5998 13898 1.224592 CCTTCCTGGAATGACGGGG 59.775 63.158 10.03 2.60 37.50 5.73
5999 13899 1.271840 CCTTCCTGGAATGACGGGGA 61.272 60.000 10.03 0.00 37.50 4.81
6000 13900 0.839946 CTTCCTGGAATGACGGGGAT 59.160 55.000 10.03 0.00 37.50 3.85
6001 13901 2.047061 CTTCCTGGAATGACGGGGATA 58.953 52.381 10.03 0.00 37.50 2.59
6002 13902 1.420430 TCCTGGAATGACGGGGATAC 58.580 55.000 0.00 0.00 37.50 2.24
6003 13903 0.033504 CCTGGAATGACGGGGATACG 59.966 60.000 0.00 0.00 40.31 3.06
6004 13904 1.037493 CTGGAATGACGGGGATACGA 58.963 55.000 0.00 0.00 37.61 3.43
6005 13905 1.000163 CTGGAATGACGGGGATACGAG 60.000 57.143 0.00 0.00 37.61 4.18
6006 13906 0.319641 GGAATGACGGGGATACGAGC 60.320 60.000 0.00 0.00 37.61 5.03
6007 13907 0.674534 GAATGACGGGGATACGAGCT 59.325 55.000 0.00 0.00 37.61 4.09
6008 13908 0.674534 AATGACGGGGATACGAGCTC 59.325 55.000 2.73 2.73 37.61 4.09
6009 13909 0.467474 ATGACGGGGATACGAGCTCA 60.467 55.000 15.40 0.00 37.61 4.26
6010 13910 1.101635 TGACGGGGATACGAGCTCAG 61.102 60.000 15.40 9.21 37.61 3.35
6011 13911 0.818445 GACGGGGATACGAGCTCAGA 60.818 60.000 15.40 0.00 37.61 3.27
6012 13912 0.820074 ACGGGGATACGAGCTCAGAG 60.820 60.000 15.40 0.00 37.61 3.35
6013 13913 1.519751 CGGGGATACGAGCTCAGAGG 61.520 65.000 15.40 0.00 35.47 3.69
6014 13914 0.178987 GGGGATACGAGCTCAGAGGA 60.179 60.000 15.40 0.00 37.60 3.71
6015 13915 1.549037 GGGGATACGAGCTCAGAGGAT 60.549 57.143 15.40 0.00 37.60 3.24
6016 13916 1.543802 GGGATACGAGCTCAGAGGATG 59.456 57.143 15.40 0.00 37.60 3.51
6017 13917 2.509569 GGATACGAGCTCAGAGGATGA 58.490 52.381 15.40 0.00 36.21 2.92
6025 13925 2.961424 TCAGAGGATGAGTGCGACA 58.039 52.632 0.00 0.00 32.77 4.35
6026 13926 1.478631 TCAGAGGATGAGTGCGACAT 58.521 50.000 0.00 0.00 32.77 3.06
6027 13927 1.406898 TCAGAGGATGAGTGCGACATC 59.593 52.381 0.00 0.00 42.07 3.06
6028 13928 1.135721 CAGAGGATGAGTGCGACATCA 59.864 52.381 15.63 2.12 43.84 3.07
6029 13929 1.135915 AGAGGATGAGTGCGACATCAC 59.864 52.381 15.63 10.58 43.84 3.06
6030 13930 0.897621 AGGATGAGTGCGACATCACA 59.102 50.000 15.63 0.00 43.84 3.58
6031 13931 1.276138 AGGATGAGTGCGACATCACAA 59.724 47.619 15.63 0.00 43.84 3.33
6032 13932 1.662629 GGATGAGTGCGACATCACAAG 59.337 52.381 15.63 0.00 43.84 3.16
6033 13933 1.061711 GATGAGTGCGACATCACAAGC 59.938 52.381 11.02 0.00 42.28 4.01
6034 13934 0.249826 TGAGTGCGACATCACAAGCA 60.250 50.000 0.00 0.00 39.35 3.91
6035 13935 1.081892 GAGTGCGACATCACAAGCAT 58.918 50.000 0.00 0.00 41.88 3.79
6036 13936 0.800631 AGTGCGACATCACAAGCATG 59.199 50.000 0.00 0.00 41.88 4.06
6037 13937 0.179181 GTGCGACATCACAAGCATGG 60.179 55.000 0.00 0.00 41.88 3.66
6038 13938 0.321475 TGCGACATCACAAGCATGGA 60.321 50.000 0.00 0.00 34.39 3.41
6039 13939 0.097674 GCGACATCACAAGCATGGAC 59.902 55.000 0.00 0.00 0.00 4.02
6040 13940 1.441738 CGACATCACAAGCATGGACA 58.558 50.000 0.00 0.00 0.00 4.02
6041 13941 2.011947 CGACATCACAAGCATGGACAT 58.988 47.619 0.00 0.00 0.00 3.06
6042 13942 2.223180 CGACATCACAAGCATGGACATG 60.223 50.000 7.91 7.91 41.60 3.21
6043 13943 2.097036 ACATCACAAGCATGGACATGG 58.903 47.619 13.63 0.70 39.16 3.66
6044 13944 1.108776 ATCACAAGCATGGACATGGC 58.891 50.000 13.63 0.00 39.16 4.40
6045 13945 0.038599 TCACAAGCATGGACATGGCT 59.961 50.000 13.63 8.49 39.16 4.75
6046 13946 0.454600 CACAAGCATGGACATGGCTC 59.545 55.000 13.63 0.00 39.16 4.70
6047 13947 0.330604 ACAAGCATGGACATGGCTCT 59.669 50.000 13.63 0.47 39.16 4.09
6048 13948 1.272313 ACAAGCATGGACATGGCTCTT 60.272 47.619 13.63 6.21 39.16 2.85
6049 13949 1.822990 CAAGCATGGACATGGCTCTTT 59.177 47.619 13.63 0.00 39.16 2.52
6050 13950 1.471119 AGCATGGACATGGCTCTTTG 58.529 50.000 13.63 0.00 39.16 2.77
6051 13951 0.458669 GCATGGACATGGCTCTTTGG 59.541 55.000 13.63 0.00 39.16 3.28
6052 13952 1.108776 CATGGACATGGCTCTTTGGG 58.891 55.000 0.00 0.00 35.24 4.12
6053 13953 0.706433 ATGGACATGGCTCTTTGGGT 59.294 50.000 0.00 0.00 0.00 4.51
6054 13954 1.367346 TGGACATGGCTCTTTGGGTA 58.633 50.000 0.00 0.00 0.00 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 9.787532 CTGTATCTTTCTTTTGTTGAGAAACAA 57.212 29.630 0.04 0.04 38.00 2.83
112 113 9.198837 TGCATGATATATGATTTGTTTTGATGC 57.801 29.630 0.00 0.00 0.00 3.91
232 233 6.667414 TGGTTTAGCTATTTCATGACCCATTT 59.333 34.615 0.00 0.00 0.00 2.32
251 252 3.211045 GGTGCAGAGTTTGACTGGTTTA 58.789 45.455 0.00 0.00 36.09 2.01
256 257 1.003545 CGTTGGTGCAGAGTTTGACTG 60.004 52.381 0.00 0.00 38.27 3.51
258 259 1.295792 TCGTTGGTGCAGAGTTTGAC 58.704 50.000 0.00 0.00 0.00 3.18
273 274 1.317613 TGTGCTGCCTTTTCATCGTT 58.682 45.000 0.00 0.00 0.00 3.85
275 276 1.469703 TCATGTGCTGCCTTTTCATCG 59.530 47.619 0.00 0.00 0.00 3.84
321 630 1.877443 GGCAGTCCGTGTGTAAAATGT 59.123 47.619 0.00 0.00 0.00 2.71
344 653 1.159905 TGTGGCTGGGGAGGAACTA 59.840 57.895 0.00 0.00 41.55 2.24
357 666 1.827789 TGACTTTGGGCAGTGTGGC 60.828 57.895 0.00 0.00 42.88 5.01
358 667 0.751277 TGTGACTTTGGGCAGTGTGG 60.751 55.000 0.00 0.00 0.00 4.17
366 675 1.876156 GAAGCTCTGTGTGACTTTGGG 59.124 52.381 0.00 0.00 0.00 4.12
401 712 1.978712 CTCCGCTCTGCTGCATGTTG 61.979 60.000 1.31 0.00 0.00 3.33
417 728 2.360475 GGACAGCAACCTGCCTCC 60.360 66.667 0.00 0.00 46.52 4.30
438 749 7.386299 AGGAATCATATCGTAGTTTGCTGAATC 59.614 37.037 0.00 0.00 0.00 2.52
452 763 3.759086 TCTTCGAGGGAGGAATCATATCG 59.241 47.826 0.00 0.00 0.00 2.92
529 840 2.132352 AGAGATCCGCCCCCGTAAC 61.132 63.158 0.00 0.00 0.00 2.50
552 863 0.601311 GGCGGAGGAATTCGATCTGG 60.601 60.000 15.92 7.80 0.00 3.86
580 891 1.716760 CTCGACGCTCGCTCTAGTT 59.283 57.895 0.00 0.00 40.21 2.24
582 893 2.052590 GCTCGACGCTCGCTCTAG 60.053 66.667 0.00 0.00 40.21 2.43
775 1104 4.933064 CTGCTCGTCGGCCGATCC 62.933 72.222 33.58 18.87 46.23 3.36
807 1136 1.671845 CTAGAGTCCGCACTGGTCTAC 59.328 57.143 0.00 0.00 36.15 2.59
918 1247 2.775032 GAACGGTTGCTACTGGGCGA 62.775 60.000 11.84 0.00 34.80 5.54
920 1249 2.388232 CGAACGGTTGCTACTGGGC 61.388 63.158 11.84 2.27 34.80 5.36
923 1252 0.914551 CGATCGAACGGTTGCTACTG 59.085 55.000 10.26 5.52 36.67 2.74
924 1253 0.801067 GCGATCGAACGGTTGCTACT 60.801 55.000 21.57 0.00 0.00 2.57
925 1254 1.074319 TGCGATCGAACGGTTGCTAC 61.074 55.000 21.57 0.00 0.00 3.58
926 1255 0.388778 TTGCGATCGAACGGTTGCTA 60.389 50.000 21.57 9.92 0.00 3.49
927 1256 1.019278 ATTGCGATCGAACGGTTGCT 61.019 50.000 21.57 0.00 0.00 3.91
928 1257 0.586502 GATTGCGATCGAACGGTTGC 60.587 55.000 21.57 12.08 0.00 4.17
937 1272 2.324477 GCCGTTGGATTGCGATCG 59.676 61.111 11.69 11.69 32.84 3.69
955 1290 1.680651 CTCAGCAGACCGTCTCCCT 60.681 63.158 0.00 0.00 0.00 4.20
998 1334 1.285950 GAAAAAGTGGCCGCACTCC 59.714 57.895 20.59 0.00 33.73 3.85
1113 1449 1.550409 GGTACCGGATAGCAGGGAGAT 60.550 57.143 9.46 0.00 33.18 2.75
1114 1450 0.178970 GGTACCGGATAGCAGGGAGA 60.179 60.000 9.46 0.00 33.18 3.71
1127 1473 2.001361 AATCGGCGAGAGTGGTACCG 62.001 60.000 17.22 0.00 45.15 4.02
1204 1550 1.338484 TGTGGCAGAGCACAGAGAATC 60.338 52.381 0.00 0.00 0.00 2.52
1212 1558 0.250038 TGAGAAGTGTGGCAGAGCAC 60.250 55.000 0.00 0.00 35.98 4.40
1258 1605 2.273370 TTTGACCTAGCGCTTCTACG 57.727 50.000 18.68 0.77 0.00 3.51
1268 1615 4.276926 GCCATGGAGCTTATTTTGACCTAG 59.723 45.833 18.40 0.00 0.00 3.02
1272 1619 4.276926 CCTAGCCATGGAGCTTATTTTGAC 59.723 45.833 18.40 0.00 41.41 3.18
1305 1652 3.284617 CATGAATCCATCAGGCAGACAA 58.715 45.455 0.00 0.00 42.53 3.18
1384 1733 5.607477 AGAGGTCTCTGTTAGAGTATCTCG 58.393 45.833 5.81 0.00 41.51 4.04
1407 1756 4.222145 CAGAACCTAACCAGTAAGCCACTA 59.778 45.833 0.00 0.00 34.98 2.74
1458 1807 2.475466 CCTACGCTGCCATTGCCAG 61.475 63.158 0.00 0.00 36.33 4.85
1479 1828 5.940617 TGATTATTTCTTGGTCGGATCCAT 58.059 37.500 13.41 0.00 37.33 3.41
1572 1921 4.893608 TGCTGCTCTGTAACAAAGTATCA 58.106 39.130 0.00 0.00 0.00 2.15
1574 1923 6.127897 GGATTTGCTGCTCTGTAACAAAGTAT 60.128 38.462 0.00 0.00 34.08 2.12
1630 1979 9.116067 TGACCACTTATATTTGGCATTACTTAC 57.884 33.333 0.00 0.00 36.20 2.34
1671 2020 7.226523 AGCATTTTATACACAATCATCGCTGTA 59.773 33.333 0.00 0.00 0.00 2.74
1777 2146 5.357314 AGATGAGCCATCAACATTTCAAGAG 59.643 40.000 14.93 0.00 42.72 2.85
1779 2148 5.340803 CAGATGAGCCATCAACATTTCAAG 58.659 41.667 14.93 0.00 42.72 3.02
1800 2169 5.809464 TCTGATTATAAATTGTGCACGCAG 58.191 37.500 13.13 6.56 0.00 5.18
1854 2223 8.887717 AGTCTACAGCTATTCATTTTTCATCAC 58.112 33.333 0.00 0.00 0.00 3.06
1878 2247 7.124901 ACCATCTTATCTCATTGTGACTACAGT 59.875 37.037 0.00 0.00 38.23 3.55
1879 2248 7.495901 ACCATCTTATCTCATTGTGACTACAG 58.504 38.462 0.00 0.00 38.23 2.74
1880 2249 7.423844 ACCATCTTATCTCATTGTGACTACA 57.576 36.000 0.00 0.00 34.31 2.74
1881 2250 8.607459 CAAACCATCTTATCTCATTGTGACTAC 58.393 37.037 0.00 0.00 0.00 2.73
1882 2251 8.321353 ACAAACCATCTTATCTCATTGTGACTA 58.679 33.333 0.00 0.00 0.00 2.59
1883 2252 7.170965 ACAAACCATCTTATCTCATTGTGACT 58.829 34.615 0.00 0.00 0.00 3.41
1884 2253 7.335422 AGACAAACCATCTTATCTCATTGTGAC 59.665 37.037 0.00 0.00 30.58 3.67
1885 2254 7.397221 AGACAAACCATCTTATCTCATTGTGA 58.603 34.615 0.00 0.00 30.58 3.58
1886 2255 7.621428 AGACAAACCATCTTATCTCATTGTG 57.379 36.000 0.00 0.00 30.58 3.33
1972 2341 9.558396 TGCAGTTTCTTTTATTTCCATGATTTT 57.442 25.926 0.00 0.00 0.00 1.82
1976 2345 6.646240 GCTTGCAGTTTCTTTTATTTCCATGA 59.354 34.615 0.00 0.00 0.00 3.07
1989 2358 2.305343 AGGAGATGAGCTTGCAGTTTCT 59.695 45.455 0.00 0.00 0.00 2.52
2001 2370 8.729805 AAATAGTTAGCAAGAAAGGAGATGAG 57.270 34.615 0.00 0.00 0.00 2.90
2097 2468 8.930846 ATAATAAACTTTGGATAGCTCAGCAT 57.069 30.769 0.00 0.00 0.00 3.79
2138 2509 1.404391 GCAAGCATTCCATGACTCAGG 59.596 52.381 0.00 0.00 0.00 3.86
2195 2566 1.264749 AACATACCTCCTGCTCGGCA 61.265 55.000 0.00 0.00 36.92 5.69
2283 2654 7.872483 AGTTTTAAACTACAAAGCAATGGGATG 59.128 33.333 8.76 0.00 40.69 3.51
2485 2857 5.015178 ACTTTCTTCCCACCCAAGATATTCA 59.985 40.000 0.00 0.00 29.89 2.57
2510 2882 6.367969 AGTTACCTAGAACAAATACAACTGCG 59.632 38.462 0.00 0.00 0.00 5.18
3165 3539 5.454755 CCTTACCAACTCTTCCTCAGAACAA 60.455 44.000 0.00 0.00 0.00 2.83
3181 3555 0.323629 CCCAGAAGACGCCTTACCAA 59.676 55.000 0.00 0.00 31.62 3.67
3287 3661 2.886523 TCCCTGCAGTTGATCAACAAAG 59.113 45.455 33.92 26.22 43.47 2.77
3351 3742 7.049754 ACAGGCAAACTTGATTCTTCAAAAAT 58.950 30.769 0.00 0.00 41.22 1.82
3440 3839 0.316196 GTTGTGCAGAAGCGTGTCAC 60.316 55.000 0.00 0.00 46.23 3.67
3489 3890 9.973246 GATATGTGCCTATTATAAATCACAACG 57.027 33.333 12.91 0.00 37.86 4.10
3501 3902 6.296026 GTTTCCTGGTGATATGTGCCTATTA 58.704 40.000 0.00 0.00 0.00 0.98
3502 3903 5.133221 GTTTCCTGGTGATATGTGCCTATT 58.867 41.667 0.00 0.00 0.00 1.73
3507 3908 2.627945 TCGTTTCCTGGTGATATGTGC 58.372 47.619 0.00 0.00 0.00 4.57
3512 3913 4.819105 ACTGAATCGTTTCCTGGTGATA 57.181 40.909 3.85 0.00 0.00 2.15
3513 3914 3.703001 ACTGAATCGTTTCCTGGTGAT 57.297 42.857 3.85 0.00 0.00 3.06
3713 4125 5.127194 TGAACTACAGGAGCATTTACGAGAT 59.873 40.000 0.00 0.00 0.00 2.75
3792 7717 3.030291 ACTTGTTTCCACCATGCTTGAA 58.970 40.909 0.22 0.00 0.00 2.69
3868 7793 1.002069 TTCCCAATGTCCCTGCTGAT 58.998 50.000 0.00 0.00 0.00 2.90
3959 8389 9.619316 TGAAAATTTTGATACATCGGTTTGTAG 57.381 29.630 8.47 0.00 35.65 2.74
3965 8395 7.083858 CACACTGAAAATTTTGATACATCGGT 58.916 34.615 8.47 0.23 0.00 4.69
3971 8401 7.591426 GTCCTGACACACTGAAAATTTTGATAC 59.409 37.037 8.47 0.00 0.00 2.24
3978 8408 7.823745 ATAAAGTCCTGACACACTGAAAATT 57.176 32.000 0.00 0.00 0.00 1.82
3979 8409 7.823745 AATAAAGTCCTGACACACTGAAAAT 57.176 32.000 0.00 0.00 0.00 1.82
4015 8445 2.083774 CAACCAAGCGCTAATGGAAGA 58.916 47.619 30.19 0.00 39.12 2.87
4054 8484 2.618241 GACAACAGGTGATCAAAGTGCA 59.382 45.455 0.00 0.00 0.00 4.57
4148 8578 1.005924 ACCTTTGGGCCATAAGACTGG 59.994 52.381 22.16 12.05 39.45 4.00
4154 8584 4.323569 TGACATTACCTTTGGGCCATAA 57.676 40.909 7.26 2.92 35.63 1.90
4228 8937 9.199982 CGGTCTGTCGTAAATAATGGTATTTAT 57.800 33.333 3.06 0.00 41.80 1.40
4230 8939 7.043565 ACGGTCTGTCGTAAATAATGGTATTT 58.956 34.615 0.00 0.00 41.98 1.40
4250 8959 5.918011 TGTTATCATTTGCAAAAAGACGGTC 59.082 36.000 17.19 0.00 0.00 4.79
4269 8978 8.844244 GCCTGATTGAGAAGAACATATTGTTAT 58.156 33.333 0.00 0.00 41.28 1.89
4304 9013 4.032703 ACCACATATTTTTCGCATGAGC 57.967 40.909 0.00 0.00 37.42 4.26
4305 9014 4.730042 CGAACCACATATTTTTCGCATGAG 59.270 41.667 0.00 0.00 34.96 2.90
4306 9015 4.657055 CGAACCACATATTTTTCGCATGA 58.343 39.130 0.00 0.00 34.96 3.07
4307 9016 4.997171 CGAACCACATATTTTTCGCATG 57.003 40.909 0.00 0.00 34.96 4.06
4311 9020 6.236838 CGTTTTAGCGAACCACATATTTTTCG 60.237 38.462 0.00 0.00 42.91 3.46
4312 9021 6.033091 CCGTTTTAGCGAACCACATATTTTTC 59.967 38.462 0.00 0.00 0.00 2.29
4328 9040 4.048241 AGAGAGCTCATACCGTTTTAGC 57.952 45.455 17.77 0.00 0.00 3.09
4467 9835 2.169789 CATCGAGCAAGTCTGGCCG 61.170 63.158 0.00 0.00 0.00 6.13
4468 9836 0.391661 TTCATCGAGCAAGTCTGGCC 60.392 55.000 0.00 0.00 0.00 5.36
4535 9903 2.542595 GGTCACCTGAAAACACACGTAG 59.457 50.000 0.00 0.00 0.00 3.51
4561 9929 2.614734 CCACCCTTTTCCTTCGGTACTC 60.615 54.545 0.00 0.00 0.00 2.59
4574 9952 1.073199 CCGTGAGCTTCCACCCTTT 59.927 57.895 0.29 0.00 33.67 3.11
4575 9953 2.750350 CCGTGAGCTTCCACCCTT 59.250 61.111 0.29 0.00 33.67 3.95
4576 9954 4.021925 GCCGTGAGCTTCCACCCT 62.022 66.667 0.29 0.00 38.99 4.34
4609 9987 6.812656 CAGATGATGAACTATCTAGTGGCATC 59.187 42.308 17.80 17.80 42.75 3.91
4657 10038 7.523052 GCTCCAGTTCCTCTATACTCACTAATG 60.523 44.444 0.00 0.00 0.00 1.90
4669 10050 4.546674 TGATATGTGCTCCAGTTCCTCTA 58.453 43.478 0.00 0.00 0.00 2.43
4672 10053 3.110705 ACTGATATGTGCTCCAGTTCCT 58.889 45.455 0.00 0.00 36.57 3.36
4879 10265 6.995364 ACATAATGCATATGGCTTAATTGCA 58.005 32.000 0.00 10.06 44.82 4.08
4940 10335 1.615883 CCGCTACTGTGATATCAGCCT 59.384 52.381 5.42 0.00 38.84 4.58
4943 10338 1.341209 TGCCCGCTACTGTGATATCAG 59.659 52.381 5.42 0.00 40.80 2.90
4961 10357 8.086851 ACAAATAACCATTTTGTCTGAAATGC 57.913 30.769 5.12 0.00 42.11 3.56
4970 10366 6.126911 ACCTTGTGGACAAATAACCATTTTGT 60.127 34.615 1.72 1.72 46.89 2.83
4971 10367 6.202570 CACCTTGTGGACAAATAACCATTTTG 59.797 38.462 0.00 0.00 38.48 2.44
4975 10371 4.735369 TCACCTTGTGGACAAATAACCAT 58.265 39.130 0.00 0.00 38.48 3.55
4998 10394 8.545472 ACTTTAGGGTACATAATGCAAGTCTAA 58.455 33.333 0.00 0.00 0.00 2.10
5045 10441 7.366551 CCCCTATTATAGACTCTGTTTTTGGGT 60.367 40.741 0.03 0.00 0.00 4.51
5103 10499 8.707938 AAATACATAGAAATGAAGGCAAAAGC 57.292 30.769 0.00 0.00 36.54 3.51
5144 10540 4.218200 TCGTGAACATTTTTGCATCCATCT 59.782 37.500 0.00 0.00 0.00 2.90
5182 10578 4.259690 GCAACGTTGTGATCCTAATCGTAC 60.260 45.833 27.78 3.13 34.39 3.67
5190 10587 1.333619 GTGTTGCAACGTTGTGATCCT 59.666 47.619 27.78 0.00 0.00 3.24
5210 10607 2.159352 TCATCAATGCCACATTCTTGCG 60.159 45.455 0.00 0.00 0.00 4.85
5224 10621 2.173669 CGACGCCGCCTTCATCAAT 61.174 57.895 0.00 0.00 0.00 2.57
5315 10712 6.857956 TGGTTGTCAATTGATTAAATACCCG 58.142 36.000 12.12 0.00 0.00 5.28
5410 10807 5.998363 CCTGTTTGGCTCTAAAGTTCTAACT 59.002 40.000 0.00 0.00 42.04 2.24
5433 10973 2.010497 GAATCGCTCCAAGTTCTTCCC 58.990 52.381 0.00 0.00 0.00 3.97
5450 10990 7.823635 TCCCTTACACTAGTACTATCTGGAAT 58.176 38.462 2.33 0.00 0.00 3.01
5455 13355 6.411789 CCCCTTCCCTTACACTAGTACTATCT 60.412 46.154 2.33 0.00 0.00 1.98
5466 13366 0.035725 CCGTTCCCCTTCCCTTACAC 60.036 60.000 0.00 0.00 0.00 2.90
5467 13367 0.474273 ACCGTTCCCCTTCCCTTACA 60.474 55.000 0.00 0.00 0.00 2.41
5473 13373 2.577593 CTCGACCGTTCCCCTTCC 59.422 66.667 0.00 0.00 0.00 3.46
5542 13442 3.118038 ACACCTGGCTCAAGTTCAGTTAA 60.118 43.478 0.00 0.00 0.00 2.01
5554 13454 3.620488 TGAATATTTGGACACCTGGCTC 58.380 45.455 0.00 0.00 0.00 4.70
5555 13455 3.266772 TCTGAATATTTGGACACCTGGCT 59.733 43.478 0.00 0.00 0.00 4.75
5556 13456 3.620488 TCTGAATATTTGGACACCTGGC 58.380 45.455 0.00 0.00 0.00 4.85
5557 13457 4.848357 ACTCTGAATATTTGGACACCTGG 58.152 43.478 0.00 0.00 0.00 4.45
5558 13458 7.921786 TTTACTCTGAATATTTGGACACCTG 57.078 36.000 0.00 0.00 0.00 4.00
5559 13459 9.838339 CTATTTACTCTGAATATTTGGACACCT 57.162 33.333 0.00 0.00 0.00 4.00
5560 13460 8.560374 GCTATTTACTCTGAATATTTGGACACC 58.440 37.037 0.00 0.00 0.00 4.16
5561 13461 9.109393 TGCTATTTACTCTGAATATTTGGACAC 57.891 33.333 0.00 0.00 0.00 3.67
5562 13462 9.851686 ATGCTATTTACTCTGAATATTTGGACA 57.148 29.630 0.00 0.00 0.00 4.02
5573 13473 9.595823 GTGGTAGTTTTATGCTATTTACTCTGA 57.404 33.333 0.00 0.00 0.00 3.27
5574 13474 9.601217 AGTGGTAGTTTTATGCTATTTACTCTG 57.399 33.333 0.00 0.00 0.00 3.35
5580 13480 8.789762 ACGAAAAGTGGTAGTTTTATGCTATTT 58.210 29.630 0.00 0.00 31.40 1.40
5581 13481 8.331730 ACGAAAAGTGGTAGTTTTATGCTATT 57.668 30.769 0.00 0.00 31.40 1.73
5582 13482 7.065443 GGACGAAAAGTGGTAGTTTTATGCTAT 59.935 37.037 0.00 0.00 31.40 2.97
5583 13483 6.369615 GGACGAAAAGTGGTAGTTTTATGCTA 59.630 38.462 0.00 0.00 31.40 3.49
5584 13484 5.180680 GGACGAAAAGTGGTAGTTTTATGCT 59.819 40.000 0.00 0.00 31.40 3.79
5585 13485 5.180680 AGGACGAAAAGTGGTAGTTTTATGC 59.819 40.000 0.00 0.00 31.40 3.14
5586 13486 6.796705 AGGACGAAAAGTGGTAGTTTTATG 57.203 37.500 0.00 0.00 31.40 1.90
5587 13487 7.551617 CCATAGGACGAAAAGTGGTAGTTTTAT 59.448 37.037 0.00 0.00 31.40 1.40
5588 13488 6.875195 CCATAGGACGAAAAGTGGTAGTTTTA 59.125 38.462 0.00 0.00 31.40 1.52
5589 13489 5.704053 CCATAGGACGAAAAGTGGTAGTTTT 59.296 40.000 0.00 0.00 33.74 2.43
5590 13490 5.221783 ACCATAGGACGAAAAGTGGTAGTTT 60.222 40.000 0.00 0.00 38.13 2.66
5591 13491 4.285260 ACCATAGGACGAAAAGTGGTAGTT 59.715 41.667 0.00 0.00 38.13 2.24
5592 13492 3.836562 ACCATAGGACGAAAAGTGGTAGT 59.163 43.478 0.00 0.00 38.13 2.73
5593 13493 4.467198 ACCATAGGACGAAAAGTGGTAG 57.533 45.455 0.00 0.00 38.13 3.18
5594 13494 4.322953 GGAACCATAGGACGAAAAGTGGTA 60.323 45.833 6.90 0.00 38.91 3.25
5595 13495 3.558533 GGAACCATAGGACGAAAAGTGGT 60.559 47.826 0.00 0.00 41.42 4.16
5596 13496 3.007635 GGAACCATAGGACGAAAAGTGG 58.992 50.000 0.00 0.00 0.00 4.00
5597 13497 3.670625 TGGAACCATAGGACGAAAAGTG 58.329 45.455 0.00 0.00 0.00 3.16
5598 13498 4.360951 TTGGAACCATAGGACGAAAAGT 57.639 40.909 0.00 0.00 0.00 2.66
5599 13499 5.699097 TTTTGGAACCATAGGACGAAAAG 57.301 39.130 0.00 0.00 0.00 2.27
5632 13532 6.829298 TGGTAGGTATCAGTCACAAACAAAAA 59.171 34.615 0.00 0.00 0.00 1.94
5633 13533 6.261381 GTGGTAGGTATCAGTCACAAACAAAA 59.739 38.462 0.00 0.00 0.00 2.44
5634 13534 5.761234 GTGGTAGGTATCAGTCACAAACAAA 59.239 40.000 0.00 0.00 0.00 2.83
5635 13535 5.071250 AGTGGTAGGTATCAGTCACAAACAA 59.929 40.000 0.00 0.00 0.00 2.83
5636 13536 4.591498 AGTGGTAGGTATCAGTCACAAACA 59.409 41.667 0.00 0.00 0.00 2.83
5637 13537 5.148651 AGTGGTAGGTATCAGTCACAAAC 57.851 43.478 0.00 0.00 0.00 2.93
5638 13538 5.818678 AAGTGGTAGGTATCAGTCACAAA 57.181 39.130 0.00 0.00 0.00 2.83
5639 13539 5.818678 AAAGTGGTAGGTATCAGTCACAA 57.181 39.130 0.00 0.00 0.00 3.33
5640 13540 5.818678 AAAAGTGGTAGGTATCAGTCACA 57.181 39.130 0.00 0.00 0.00 3.58
5660 13560 4.681835 TTTTGAGACAACCGACGAAAAA 57.318 36.364 0.00 0.00 0.00 1.94
5661 13561 4.681835 TTTTTGAGACAACCGACGAAAA 57.318 36.364 0.00 0.00 0.00 2.29
5679 13579 0.753867 AACGGGCGATTTGGGTTTTT 59.246 45.000 0.00 0.00 0.00 1.94
5680 13580 0.032815 CAACGGGCGATTTGGGTTTT 59.967 50.000 0.00 0.00 0.00 2.43
5681 13581 1.663173 CAACGGGCGATTTGGGTTT 59.337 52.632 0.00 0.00 0.00 3.27
5682 13582 2.926420 GCAACGGGCGATTTGGGTT 61.926 57.895 0.00 0.00 0.00 4.11
5683 13583 3.370231 GCAACGGGCGATTTGGGT 61.370 61.111 0.00 0.00 0.00 4.51
5692 13592 0.518195 TTAAAACGCTAGCAACGGGC 59.482 50.000 16.45 0.00 45.30 6.13
5693 13593 2.577450 GTTTAAAACGCTAGCAACGGG 58.423 47.619 16.45 0.00 34.00 5.28
5694 13594 2.577450 GGTTTAAAACGCTAGCAACGG 58.423 47.619 16.45 0.05 34.00 4.44
5695 13595 2.227556 CGGTTTAAAACGCTAGCAACG 58.772 47.619 13.44 3.55 0.00 4.10
5696 13596 3.257745 ACGGTTTAAAACGCTAGCAAC 57.742 42.857 24.87 10.01 0.00 4.17
5697 13597 3.967203 AACGGTTTAAAACGCTAGCAA 57.033 38.095 24.87 0.00 0.00 3.91
5698 13598 3.967203 AAACGGTTTAAAACGCTAGCA 57.033 38.095 24.87 0.00 0.00 3.49
5699 13599 4.377738 CAGAAAACGGTTTAAAACGCTAGC 59.622 41.667 24.87 12.42 0.00 3.42
5700 13600 5.618395 GTCAGAAAACGGTTTAAAACGCTAG 59.382 40.000 24.87 9.65 0.00 3.42
5701 13601 5.500825 GTCAGAAAACGGTTTAAAACGCTA 58.499 37.500 24.87 0.00 0.00 4.26
5702 13602 4.345288 GTCAGAAAACGGTTTAAAACGCT 58.655 39.130 24.87 10.92 0.00 5.07
5703 13603 3.176287 CGTCAGAAAACGGTTTAAAACGC 59.824 43.478 24.87 9.09 38.96 4.84
5704 13604 4.899579 CGTCAGAAAACGGTTTAAAACG 57.100 40.909 23.48 23.48 38.96 3.60
5714 13614 2.025418 CCCGGACCGTCAGAAAACG 61.025 63.158 13.94 0.00 42.24 3.60
5715 13615 2.322830 GCCCGGACCGTCAGAAAAC 61.323 63.158 13.94 0.00 0.00 2.43
5716 13616 2.031465 GCCCGGACCGTCAGAAAA 59.969 61.111 13.94 0.00 0.00 2.29
5717 13617 4.011517 GGCCCGGACCGTCAGAAA 62.012 66.667 13.94 0.00 0.00 2.52
5737 13637 2.047844 CTGACGTGGCCTGACAGG 60.048 66.667 17.83 17.83 38.80 4.00
5738 13638 2.740055 GCTGACGTGGCCTGACAG 60.740 66.667 18.37 18.37 33.26 3.51
5739 13639 4.662961 CGCTGACGTGGCCTGACA 62.663 66.667 3.32 2.21 33.53 3.58
5823 13723 0.526524 AGAGTAATGAGCGCACGAGC 60.527 55.000 11.47 0.00 37.42 5.03
5824 13724 1.195347 CAGAGTAATGAGCGCACGAG 58.805 55.000 11.47 0.00 0.00 4.18
5825 13725 0.802222 GCAGAGTAATGAGCGCACGA 60.802 55.000 11.47 0.00 0.00 4.35
5826 13726 0.803768 AGCAGAGTAATGAGCGCACG 60.804 55.000 11.47 0.00 0.00 5.34
5827 13727 0.926846 GAGCAGAGTAATGAGCGCAC 59.073 55.000 11.47 3.13 0.00 5.34
5828 13728 0.179100 GGAGCAGAGTAATGAGCGCA 60.179 55.000 11.47 0.00 0.00 6.09
5829 13729 0.878086 GGGAGCAGAGTAATGAGCGC 60.878 60.000 0.00 0.00 0.00 5.92
5830 13730 0.249657 GGGGAGCAGAGTAATGAGCG 60.250 60.000 0.00 0.00 0.00 5.03
5831 13731 1.127343 AGGGGAGCAGAGTAATGAGC 58.873 55.000 0.00 0.00 0.00 4.26
5832 13732 1.202627 GCAGGGGAGCAGAGTAATGAG 60.203 57.143 0.00 0.00 0.00 2.90
5833 13733 0.833287 GCAGGGGAGCAGAGTAATGA 59.167 55.000 0.00 0.00 0.00 2.57
5834 13734 0.179034 GGCAGGGGAGCAGAGTAATG 60.179 60.000 0.00 0.00 35.83 1.90
5835 13735 1.348775 GGGCAGGGGAGCAGAGTAAT 61.349 60.000 0.00 0.00 35.83 1.89
5836 13736 1.995626 GGGCAGGGGAGCAGAGTAA 60.996 63.158 0.00 0.00 35.83 2.24
5837 13737 2.365635 GGGCAGGGGAGCAGAGTA 60.366 66.667 0.00 0.00 35.83 2.59
5838 13738 4.345286 AGGGCAGGGGAGCAGAGT 62.345 66.667 0.00 0.00 35.83 3.24
5839 13739 3.478274 GAGGGCAGGGGAGCAGAG 61.478 72.222 0.00 0.00 35.83 3.35
5840 13740 4.337304 TGAGGGCAGGGGAGCAGA 62.337 66.667 0.00 0.00 35.83 4.26
5841 13741 4.106925 GTGAGGGCAGGGGAGCAG 62.107 72.222 0.00 0.00 35.83 4.24
5842 13742 4.664267 AGTGAGGGCAGGGGAGCA 62.664 66.667 0.00 0.00 35.83 4.26
5843 13743 3.791586 GAGTGAGGGCAGGGGAGC 61.792 72.222 0.00 0.00 0.00 4.70
5844 13744 2.040278 AGAGTGAGGGCAGGGGAG 59.960 66.667 0.00 0.00 0.00 4.30
5845 13745 2.039624 GAGAGTGAGGGCAGGGGA 59.960 66.667 0.00 0.00 0.00 4.81
5846 13746 2.284921 TGAGAGTGAGGGCAGGGG 60.285 66.667 0.00 0.00 0.00 4.79
5847 13747 1.611851 AGTGAGAGTGAGGGCAGGG 60.612 63.158 0.00 0.00 0.00 4.45
5848 13748 0.614415 AGAGTGAGAGTGAGGGCAGG 60.614 60.000 0.00 0.00 0.00 4.85
5849 13749 0.817013 GAGAGTGAGAGTGAGGGCAG 59.183 60.000 0.00 0.00 0.00 4.85
5850 13750 0.407528 AGAGAGTGAGAGTGAGGGCA 59.592 55.000 0.00 0.00 0.00 5.36
5851 13751 1.102978 GAGAGAGTGAGAGTGAGGGC 58.897 60.000 0.00 0.00 0.00 5.19
5852 13752 1.684869 GGGAGAGAGTGAGAGTGAGGG 60.685 61.905 0.00 0.00 0.00 4.30
5853 13753 1.684869 GGGGAGAGAGTGAGAGTGAGG 60.685 61.905 0.00 0.00 0.00 3.86
5854 13754 1.284785 AGGGGAGAGAGTGAGAGTGAG 59.715 57.143 0.00 0.00 0.00 3.51
5855 13755 1.005332 CAGGGGAGAGAGTGAGAGTGA 59.995 57.143 0.00 0.00 0.00 3.41
5856 13756 1.473258 CAGGGGAGAGAGTGAGAGTG 58.527 60.000 0.00 0.00 0.00 3.51
5857 13757 0.324275 GCAGGGGAGAGAGTGAGAGT 60.324 60.000 0.00 0.00 0.00 3.24
5858 13758 1.042559 GGCAGGGGAGAGAGTGAGAG 61.043 65.000 0.00 0.00 0.00 3.20
5859 13759 1.000993 GGCAGGGGAGAGAGTGAGA 59.999 63.158 0.00 0.00 0.00 3.27
5860 13760 2.063378 GGGCAGGGGAGAGAGTGAG 61.063 68.421 0.00 0.00 0.00 3.51
5861 13761 2.039624 GGGCAGGGGAGAGAGTGA 59.960 66.667 0.00 0.00 0.00 3.41
5862 13762 3.465403 CGGGCAGGGGAGAGAGTG 61.465 72.222 0.00 0.00 0.00 3.51
5870 13770 4.431131 AATGAGTGCGGGCAGGGG 62.431 66.667 0.00 0.00 0.00 4.79
5871 13771 2.825836 GAATGAGTGCGGGCAGGG 60.826 66.667 0.00 0.00 0.00 4.45
5872 13772 2.825836 GGAATGAGTGCGGGCAGG 60.826 66.667 0.00 0.00 0.00 4.85
5873 13773 1.817099 GAGGAATGAGTGCGGGCAG 60.817 63.158 0.00 0.00 0.00 4.85
5874 13774 2.268920 GAGGAATGAGTGCGGGCA 59.731 61.111 0.00 0.00 0.00 5.36
5875 13775 1.817099 CAGAGGAATGAGTGCGGGC 60.817 63.158 0.00 0.00 0.00 6.13
5876 13776 1.817099 GCAGAGGAATGAGTGCGGG 60.817 63.158 0.00 0.00 0.00 6.13
5877 13777 0.809241 GAGCAGAGGAATGAGTGCGG 60.809 60.000 0.00 0.00 40.97 5.69
5878 13778 0.175302 AGAGCAGAGGAATGAGTGCG 59.825 55.000 0.00 0.00 40.97 5.34
5879 13779 1.206610 TGAGAGCAGAGGAATGAGTGC 59.793 52.381 0.00 0.00 36.10 4.40
5880 13780 2.496871 AGTGAGAGCAGAGGAATGAGTG 59.503 50.000 0.00 0.00 0.00 3.51
5881 13781 2.760092 GAGTGAGAGCAGAGGAATGAGT 59.240 50.000 0.00 0.00 0.00 3.41
5882 13782 3.025978 AGAGTGAGAGCAGAGGAATGAG 58.974 50.000 0.00 0.00 0.00 2.90
5883 13783 3.023119 GAGAGTGAGAGCAGAGGAATGA 58.977 50.000 0.00 0.00 0.00 2.57
5884 13784 2.759535 TGAGAGTGAGAGCAGAGGAATG 59.240 50.000 0.00 0.00 0.00 2.67
5885 13785 2.760092 GTGAGAGTGAGAGCAGAGGAAT 59.240 50.000 0.00 0.00 0.00 3.01
5886 13786 2.166829 GTGAGAGTGAGAGCAGAGGAA 58.833 52.381 0.00 0.00 0.00 3.36
5887 13787 1.354031 AGTGAGAGTGAGAGCAGAGGA 59.646 52.381 0.00 0.00 0.00 3.71
5888 13788 1.745087 GAGTGAGAGTGAGAGCAGAGG 59.255 57.143 0.00 0.00 0.00 3.69
5889 13789 2.679837 GAGAGTGAGAGTGAGAGCAGAG 59.320 54.545 0.00 0.00 0.00 3.35
5890 13790 2.305635 AGAGAGTGAGAGTGAGAGCAGA 59.694 50.000 0.00 0.00 0.00 4.26
5891 13791 2.679837 GAGAGAGTGAGAGTGAGAGCAG 59.320 54.545 0.00 0.00 0.00 4.24
5892 13792 2.710377 GAGAGAGTGAGAGTGAGAGCA 58.290 52.381 0.00 0.00 0.00 4.26
5893 13793 1.665679 CGAGAGAGTGAGAGTGAGAGC 59.334 57.143 0.00 0.00 0.00 4.09
5894 13794 1.665679 GCGAGAGAGTGAGAGTGAGAG 59.334 57.143 0.00 0.00 0.00 3.20
5895 13795 1.277842 AGCGAGAGAGTGAGAGTGAGA 59.722 52.381 0.00 0.00 0.00 3.27
5896 13796 1.665679 GAGCGAGAGAGTGAGAGTGAG 59.334 57.143 0.00 0.00 0.00 3.51
5897 13797 1.677518 GGAGCGAGAGAGTGAGAGTGA 60.678 57.143 0.00 0.00 0.00 3.41
5898 13798 0.732571 GGAGCGAGAGAGTGAGAGTG 59.267 60.000 0.00 0.00 0.00 3.51
5899 13799 0.618458 AGGAGCGAGAGAGTGAGAGT 59.382 55.000 0.00 0.00 0.00 3.24
5900 13800 1.134401 AGAGGAGCGAGAGAGTGAGAG 60.134 57.143 0.00 0.00 0.00 3.20
5901 13801 0.908910 AGAGGAGCGAGAGAGTGAGA 59.091 55.000 0.00 0.00 0.00 3.27
5902 13802 1.299541 GAGAGGAGCGAGAGAGTGAG 58.700 60.000 0.00 0.00 0.00 3.51
5903 13803 0.107410 GGAGAGGAGCGAGAGAGTGA 60.107 60.000 0.00 0.00 0.00 3.41
5904 13804 0.107214 AGGAGAGGAGCGAGAGAGTG 60.107 60.000 0.00 0.00 0.00 3.51
5905 13805 0.180406 GAGGAGAGGAGCGAGAGAGT 59.820 60.000 0.00 0.00 0.00 3.24
5906 13806 0.469917 AGAGGAGAGGAGCGAGAGAG 59.530 60.000 0.00 0.00 0.00 3.20
5907 13807 0.468226 GAGAGGAGAGGAGCGAGAGA 59.532 60.000 0.00 0.00 0.00 3.10
5908 13808 0.469917 AGAGAGGAGAGGAGCGAGAG 59.530 60.000 0.00 0.00 0.00 3.20
5909 13809 0.180171 CAGAGAGGAGAGGAGCGAGA 59.820 60.000 0.00 0.00 0.00 4.04
5910 13810 1.447317 GCAGAGAGGAGAGGAGCGAG 61.447 65.000 0.00 0.00 0.00 5.03
5911 13811 1.453015 GCAGAGAGGAGAGGAGCGA 60.453 63.158 0.00 0.00 0.00 4.93
5912 13812 1.447317 GAGCAGAGAGGAGAGGAGCG 61.447 65.000 0.00 0.00 0.00 5.03
5913 13813 0.106519 AGAGCAGAGAGGAGAGGAGC 60.107 60.000 0.00 0.00 0.00 4.70
5914 13814 2.301346 GAAGAGCAGAGAGGAGAGGAG 58.699 57.143 0.00 0.00 0.00 3.69
5915 13815 1.408127 CGAAGAGCAGAGAGGAGAGGA 60.408 57.143 0.00 0.00 0.00 3.71
5916 13816 1.024271 CGAAGAGCAGAGAGGAGAGG 58.976 60.000 0.00 0.00 0.00 3.69
5917 13817 1.670811 GTCGAAGAGCAGAGAGGAGAG 59.329 57.143 0.00 0.00 36.95 3.20
5918 13818 1.745232 GTCGAAGAGCAGAGAGGAGA 58.255 55.000 0.00 0.00 36.95 3.71
5919 13819 0.376852 CGTCGAAGAGCAGAGAGGAG 59.623 60.000 0.00 0.00 36.95 3.69
5920 13820 1.649390 GCGTCGAAGAGCAGAGAGGA 61.649 60.000 1.37 0.00 36.95 3.71
5921 13821 1.226547 GCGTCGAAGAGCAGAGAGG 60.227 63.158 1.37 0.00 36.95 3.69
5922 13822 1.226547 GGCGTCGAAGAGCAGAGAG 60.227 63.158 1.37 0.00 36.95 3.20
5923 13823 2.878429 GGCGTCGAAGAGCAGAGA 59.122 61.111 1.37 0.00 36.95 3.10
5924 13824 2.578178 CGGCGTCGAAGAGCAGAG 60.578 66.667 1.44 0.00 36.95 3.35
5925 13825 4.116328 CCGGCGTCGAAGAGCAGA 62.116 66.667 12.93 0.00 36.95 4.26
5946 13846 2.856032 CTTCCACAGCGCAAGTCG 59.144 61.111 11.47 0.00 42.12 4.18
5947 13847 2.558313 GCTTCCACAGCGCAAGTC 59.442 61.111 11.47 0.00 39.29 3.01
5972 13872 2.916527 ATTCCAGGAAGGCATGGCGG 62.917 60.000 14.30 8.70 45.39 6.13
5973 13873 1.454479 ATTCCAGGAAGGCATGGCG 60.454 57.895 14.30 0.00 45.39 5.69
5974 13874 0.396139 TCATTCCAGGAAGGCATGGC 60.396 55.000 12.14 12.14 45.39 4.40
5976 13876 1.019673 CGTCATTCCAGGAAGGCATG 58.980 55.000 9.14 1.53 41.76 4.06
5977 13877 0.107017 CCGTCATTCCAGGAAGGCAT 60.107 55.000 9.14 0.00 37.29 4.40
5978 13878 1.299648 CCGTCATTCCAGGAAGGCA 59.700 57.895 9.14 0.00 37.29 4.75
5979 13879 1.452108 CCCGTCATTCCAGGAAGGC 60.452 63.158 9.14 3.84 37.29 4.35
5980 13880 1.224592 CCCCGTCATTCCAGGAAGG 59.775 63.158 7.60 7.60 39.47 3.46
5981 13881 0.839946 ATCCCCGTCATTCCAGGAAG 59.160 55.000 8.20 0.35 0.00 3.46
5982 13882 1.766496 GTATCCCCGTCATTCCAGGAA 59.234 52.381 3.72 3.72 0.00 3.36
5983 13883 1.420430 GTATCCCCGTCATTCCAGGA 58.580 55.000 0.00 0.00 0.00 3.86
5984 13884 0.033504 CGTATCCCCGTCATTCCAGG 59.966 60.000 0.00 0.00 0.00 4.45
5985 13885 1.000163 CTCGTATCCCCGTCATTCCAG 60.000 57.143 0.00 0.00 0.00 3.86
5986 13886 1.037493 CTCGTATCCCCGTCATTCCA 58.963 55.000 0.00 0.00 0.00 3.53
5987 13887 0.319641 GCTCGTATCCCCGTCATTCC 60.320 60.000 0.00 0.00 0.00 3.01
5988 13888 0.674534 AGCTCGTATCCCCGTCATTC 59.325 55.000 0.00 0.00 0.00 2.67
5989 13889 0.674534 GAGCTCGTATCCCCGTCATT 59.325 55.000 0.00 0.00 0.00 2.57
5990 13890 0.467474 TGAGCTCGTATCCCCGTCAT 60.467 55.000 9.64 0.00 0.00 3.06
5991 13891 1.077285 TGAGCTCGTATCCCCGTCA 60.077 57.895 9.64 0.00 0.00 4.35
5992 13892 0.818445 TCTGAGCTCGTATCCCCGTC 60.818 60.000 9.64 0.00 0.00 4.79
5993 13893 0.820074 CTCTGAGCTCGTATCCCCGT 60.820 60.000 9.64 0.00 0.00 5.28
5994 13894 1.519751 CCTCTGAGCTCGTATCCCCG 61.520 65.000 9.64 0.00 0.00 5.73
5995 13895 0.178987 TCCTCTGAGCTCGTATCCCC 60.179 60.000 9.64 0.00 0.00 4.81
5996 13896 1.543802 CATCCTCTGAGCTCGTATCCC 59.456 57.143 9.64 0.00 0.00 3.85
5997 13897 2.487762 CTCATCCTCTGAGCTCGTATCC 59.512 54.545 9.64 0.00 44.73 2.59
5998 13898 3.829886 CTCATCCTCTGAGCTCGTATC 57.170 52.381 9.64 0.00 44.73 2.24
6007 13907 1.406898 GATGTCGCACTCATCCTCTGA 59.593 52.381 0.00 0.00 36.62 3.27
6008 13908 1.135721 TGATGTCGCACTCATCCTCTG 59.864 52.381 9.27 0.00 40.38 3.35
6009 13909 1.135915 GTGATGTCGCACTCATCCTCT 59.864 52.381 9.27 0.00 40.38 3.69
6010 13910 1.134995 TGTGATGTCGCACTCATCCTC 60.135 52.381 9.27 5.04 40.38 3.71
6011 13911 0.897621 TGTGATGTCGCACTCATCCT 59.102 50.000 9.27 0.00 40.38 3.24
6012 13912 1.662629 CTTGTGATGTCGCACTCATCC 59.337 52.381 9.27 3.73 40.38 3.51
6013 13913 1.061711 GCTTGTGATGTCGCACTCATC 59.938 52.381 0.00 6.01 41.16 2.92
6014 13914 1.081892 GCTTGTGATGTCGCACTCAT 58.918 50.000 0.00 0.00 39.49 2.90
6015 13915 0.249826 TGCTTGTGATGTCGCACTCA 60.250 50.000 0.00 0.00 39.49 3.41
6016 13916 1.081892 ATGCTTGTGATGTCGCACTC 58.918 50.000 0.00 0.00 39.49 3.51
6017 13917 0.800631 CATGCTTGTGATGTCGCACT 59.199 50.000 0.00 0.00 39.49 4.40
6018 13918 0.179181 CCATGCTTGTGATGTCGCAC 60.179 55.000 0.00 0.00 35.92 5.34
6019 13919 0.321475 TCCATGCTTGTGATGTCGCA 60.321 50.000 0.00 0.00 36.75 5.10
6020 13920 0.097674 GTCCATGCTTGTGATGTCGC 59.902 55.000 0.00 0.00 0.00 5.19
6021 13921 1.441738 TGTCCATGCTTGTGATGTCG 58.558 50.000 0.00 0.00 0.00 4.35
6022 13922 2.098607 CCATGTCCATGCTTGTGATGTC 59.901 50.000 1.64 0.00 37.49 3.06
6023 13923 2.097036 CCATGTCCATGCTTGTGATGT 58.903 47.619 1.64 0.00 37.49 3.06
6024 13924 1.202371 GCCATGTCCATGCTTGTGATG 60.202 52.381 1.64 0.00 37.49 3.07
6025 13925 1.108776 GCCATGTCCATGCTTGTGAT 58.891 50.000 1.64 0.00 37.49 3.06
6026 13926 0.038599 AGCCATGTCCATGCTTGTGA 59.961 50.000 1.64 0.00 37.49 3.58
6027 13927 0.454600 GAGCCATGTCCATGCTTGTG 59.545 55.000 1.64 0.00 37.49 3.33
6028 13928 0.330604 AGAGCCATGTCCATGCTTGT 59.669 50.000 1.64 0.00 37.49 3.16
6029 13929 1.471119 AAGAGCCATGTCCATGCTTG 58.529 50.000 1.64 0.00 37.49 4.01
6030 13930 1.822990 CAAAGAGCCATGTCCATGCTT 59.177 47.619 1.64 0.00 37.49 3.91
6031 13931 1.471119 CAAAGAGCCATGTCCATGCT 58.529 50.000 1.64 3.34 37.49 3.79
6032 13932 0.458669 CCAAAGAGCCATGTCCATGC 59.541 55.000 1.64 0.00 37.49 4.06
6033 13933 1.108776 CCCAAAGAGCCATGTCCATG 58.891 55.000 0.14 0.14 38.51 3.66
6034 13934 0.706433 ACCCAAAGAGCCATGTCCAT 59.294 50.000 0.00 0.00 0.00 3.41
6035 13935 1.367346 TACCCAAAGAGCCATGTCCA 58.633 50.000 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.