Multiple sequence alignment - TraesCS7D01G165300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G165300 chr7D 100.000 3711 0 0 1 3711 115050985 115047275 0.000000e+00 6854.0
1 TraesCS7D01G165300 chr7D 100.000 174 0 0 3997 4170 115046989 115046816 5.200000e-84 322.0
2 TraesCS7D01G165300 chr7D 92.727 165 12 0 575 739 500775454 500775618 5.390000e-59 239.0
3 TraesCS7D01G165300 chr7D 90.286 175 16 1 578 751 183790262 183790436 1.170000e-55 228.0
4 TraesCS7D01G165300 chr7D 91.837 49 4 0 3628 3676 393028432 393028384 7.480000e-08 69.4
5 TraesCS7D01G165300 chr7B 91.691 1035 34 14 2431 3432 74598594 74597579 0.000000e+00 1387.0
6 TraesCS7D01G165300 chr7B 89.955 667 23 17 738 1380 74600736 74600090 0.000000e+00 821.0
7 TraesCS7D01G165300 chr7B 90.924 606 34 8 1882 2478 74599173 74598580 0.000000e+00 795.0
8 TraesCS7D01G165300 chr7B 91.627 418 28 4 1 414 74601668 74601254 4.680000e-159 571.0
9 TraesCS7D01G165300 chr7B 91.243 354 11 10 1450 1787 74600009 74599660 8.170000e-127 464.0
10 TraesCS7D01G165300 chr7B 79.461 594 57 30 3033 3587 74575425 74574858 1.100000e-95 361.0
11 TraesCS7D01G165300 chr7B 81.600 250 31 12 2526 2768 565577310 565577551 4.250000e-45 193.0
12 TraesCS7D01G165300 chr7B 81.707 164 17 6 435 585 74600892 74600729 1.570000e-24 124.0
13 TraesCS7D01G165300 chr7A 92.369 996 34 14 2433 3404 119702753 119701776 0.000000e+00 1380.0
14 TraesCS7D01G165300 chr7A 89.139 1068 59 29 1450 2483 119703781 119702737 0.000000e+00 1277.0
15 TraesCS7D01G165300 chr7A 92.424 660 14 16 738 1380 119704503 119703863 0.000000e+00 909.0
16 TraesCS7D01G165300 chr7A 86.468 436 31 10 1 409 119705126 119704692 1.770000e-123 453.0
17 TraesCS7D01G165300 chr7A 89.831 59 5 1 3625 3682 445216746 445216688 1.610000e-09 75.0
18 TraesCS7D01G165300 chr7A 92.500 40 2 1 4096 4135 732502941 732502979 5.820000e-04 56.5
19 TraesCS7D01G165300 chr6A 86.449 428 51 6 2513 2938 570382535 570382113 2.940000e-126 462.0
20 TraesCS7D01G165300 chr6A 80.563 355 46 12 1493 1844 570383740 570383406 6.920000e-63 252.0
21 TraesCS7D01G165300 chr6A 84.694 98 10 3 3997 4093 552752334 552752427 4.440000e-15 93.5
22 TraesCS7D01G165300 chr6D 85.814 430 54 6 2511 2938 425902769 425902345 2.290000e-122 449.0
23 TraesCS7D01G165300 chr6D 79.718 355 51 20 1493 1844 425903884 425903548 1.940000e-58 237.0
24 TraesCS7D01G165300 chr6D 83.871 93 14 1 3585 3676 451627806 451627714 2.070000e-13 87.9
25 TraesCS7D01G165300 chr6D 82.418 91 15 1 3587 3676 23102091 23102181 1.240000e-10 78.7
26 TraesCS7D01G165300 chr6B 85.581 430 55 6 2511 2938 640978881 640978457 1.060000e-120 444.0
27 TraesCS7D01G165300 chr6B 79.474 380 59 16 1473 1844 640980040 640979672 6.920000e-63 252.0
28 TraesCS7D01G165300 chr2D 78.389 509 90 18 2527 3025 121703540 121703042 3.130000e-81 313.0
29 TraesCS7D01G165300 chr2D 96.914 162 5 0 578 739 447251926 447251765 5.310000e-69 272.0
30 TraesCS7D01G165300 chr2D 92.025 163 13 0 577 739 387193694 387193856 3.240000e-56 230.0
31 TraesCS7D01G165300 chr2D 84.706 85 9 2 4009 4093 49889460 49889540 9.610000e-12 82.4
32 TraesCS7D01G165300 chr2D 97.619 42 1 0 1560 1601 50158223 50158182 5.780000e-09 73.1
33 TraesCS7D01G165300 chr2A 79.279 444 77 14 2527 2962 125900754 125900318 3.150000e-76 296.0
34 TraesCS7D01G165300 chr4D 98.765 162 2 0 578 739 64085088 64085249 5.270000e-74 289.0
35 TraesCS7D01G165300 chr4D 96.296 162 6 0 578 739 403156778 403156617 2.470000e-67 267.0
36 TraesCS7D01G165300 chr4D 95.679 162 7 0 578 739 403157420 403157259 1.150000e-65 261.0
37 TraesCS7D01G165300 chr4D 78.486 251 42 10 1131 1378 464153137 464153378 2.010000e-33 154.0
38 TraesCS7D01G165300 chr4D 97.778 45 1 0 461 505 52451911 52451955 1.240000e-10 78.7
39 TraesCS7D01G165300 chrUn 97.076 171 3 2 578 746 29988263 29988093 1.900000e-73 287.0
40 TraesCS7D01G165300 chr2B 76.735 533 99 22 2527 3044 174828819 174828297 1.480000e-69 274.0
41 TraesCS7D01G165300 chr3D 87.019 208 23 3 536 739 537154656 537154863 9.020000e-57 231.0
42 TraesCS7D01G165300 chr1D 77.165 254 51 7 1128 1379 77838821 77839069 1.560000e-29 141.0
43 TraesCS7D01G165300 chr1D 92.982 57 1 2 441 495 364731399 364731344 3.460000e-11 80.5
44 TraesCS7D01G165300 chr4A 77.291 251 45 8 1131 1378 5839661 5839420 2.020000e-28 137.0
45 TraesCS7D01G165300 chr4A 80.000 95 17 2 3573 3665 743755923 743755829 7.480000e-08 69.4
46 TraesCS7D01G165300 chr4B 80.240 167 28 4 4003 4168 665280216 665280054 2.040000e-23 121.0
47 TraesCS7D01G165300 chr1A 75.591 254 55 7 1128 1379 108922516 108922764 7.320000e-23 119.0
48 TraesCS7D01G165300 chr1A 87.879 66 4 2 1307 1368 7519408 7519473 1.610000e-09 75.0
49 TraesCS7D01G165300 chr5D 86.111 108 15 0 1738 1845 326119199 326119306 2.630000e-22 117.0
50 TraesCS7D01G165300 chr5D 85.185 108 16 0 1738 1845 325664651 325664758 1.230000e-20 111.0
51 TraesCS7D01G165300 chr5B 86.111 108 15 0 1738 1845 378511639 378511746 2.630000e-22 117.0
52 TraesCS7D01G165300 chr5B 87.324 71 9 0 435 505 131015857 131015787 9.610000e-12 82.4
53 TraesCS7D01G165300 chr5A 84.956 113 14 3 1738 1848 430957704 430957593 1.230000e-20 111.0
54 TraesCS7D01G165300 chr5A 83.929 112 17 1 1738 1848 430507384 430507273 5.700000e-19 106.0
55 TraesCS7D01G165300 chr3A 80.882 136 23 3 2639 2773 743377886 743377753 2.050000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G165300 chr7D 115046816 115050985 4169 True 3588.000000 6854 100.0000 1 4170 2 chr7D.!!$R2 4169
1 TraesCS7D01G165300 chr7B 74597579 74601668 4089 True 693.666667 1387 89.5245 1 3432 6 chr7B.!!$R2 3431
2 TraesCS7D01G165300 chr7B 74574858 74575425 567 True 361.000000 361 79.4610 3033 3587 1 chr7B.!!$R1 554
3 TraesCS7D01G165300 chr7A 119701776 119705126 3350 True 1004.750000 1380 90.1000 1 3404 4 chr7A.!!$R2 3403
4 TraesCS7D01G165300 chr6A 570382113 570383740 1627 True 357.000000 462 83.5060 1493 2938 2 chr6A.!!$R1 1445
5 TraesCS7D01G165300 chr6D 425902345 425903884 1539 True 343.000000 449 82.7660 1493 2938 2 chr6D.!!$R2 1445
6 TraesCS7D01G165300 chr6B 640978457 640980040 1583 True 348.000000 444 82.5275 1473 2938 2 chr6B.!!$R1 1465
7 TraesCS7D01G165300 chr4D 403156617 403157420 803 True 264.000000 267 95.9875 578 739 2 chr4D.!!$R1 161
8 TraesCS7D01G165300 chr2B 174828297 174828819 522 True 274.000000 274 76.7350 2527 3044 1 chr2B.!!$R1 517

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
907 1967 0.404040 CCTTGGCCTTGTCCTAACCA 59.596 55.0 3.32 0.0 0.00 3.67 F
1403 2481 0.037605 ACCTTCGGTTGGCTAGTTCG 60.038 55.0 0.00 0.0 27.29 3.95 F
1671 2793 0.175760 ATCGATCGACTGGGTTGGTG 59.824 55.0 22.06 0.0 0.00 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1850 2972 0.460987 GAGCGGGTGGATGAACAGAG 60.461 60.0 0.00 0.0 0.0 3.35 R
3157 5060 0.596083 GCTCCGATCAGATCACACCG 60.596 60.0 11.12 0.0 0.0 4.94 R
3462 5409 0.036388 ATACAGGCAGGTCACAACGG 60.036 55.0 0.00 0.0 0.0 4.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 54 0.532862 ACAAACGACCACTCCTGCTG 60.533 55.000 0.00 0.00 0.00 4.41
125 134 3.933332 GTCACCGTTGATTAGAAAGGGAG 59.067 47.826 2.18 0.00 36.33 4.30
129 138 3.055385 CCGTTGATTAGAAAGGGAGGTCA 60.055 47.826 0.00 0.00 35.09 4.02
198 210 2.949447 CCATCCCCTTTCATACCTTGG 58.051 52.381 0.00 0.00 0.00 3.61
199 211 2.513738 CCATCCCCTTTCATACCTTGGA 59.486 50.000 0.00 0.00 0.00 3.53
270 297 6.880529 TGGCCACACTAATTAACTAACTAACC 59.119 38.462 0.00 0.00 0.00 2.85
327 354 3.067742 CCATGCCAAGGCTAGAATTTGAG 59.932 47.826 12.96 0.00 42.51 3.02
421 486 3.727726 TCGTTCAATGAGAGCAACTTCA 58.272 40.909 0.00 0.00 0.00 3.02
437 810 6.539464 AGCAACTTCATCAATCTCAAGATCTC 59.461 38.462 0.00 0.00 32.75 2.75
445 818 6.922247 TCAATCTCAAGATCTCAAAGATGC 57.078 37.500 12.62 0.00 34.53 3.91
447 820 6.762187 TCAATCTCAAGATCTCAAAGATGCTC 59.238 38.462 12.62 0.00 34.53 4.26
465 838 3.706086 TGCTCATAGAAGTAGGATGTGCA 59.294 43.478 6.71 6.71 43.79 4.57
467 840 4.689812 GCTCATAGAAGTAGGATGTGCATG 59.310 45.833 0.00 0.00 39.01 4.06
518 891 9.533253 TGTGCATATGTATATGTATGTATGAGC 57.467 33.333 12.14 0.00 41.63 4.26
569 976 3.498018 GCGTATGCATCACCAATGATACA 59.502 43.478 0.19 0.00 44.13 2.29
570 977 4.154737 GCGTATGCATCACCAATGATACAT 59.845 41.667 0.19 7.85 46.65 2.29
571 978 5.624292 CGTATGCATCACCAATGATACATG 58.376 41.667 0.19 0.00 45.28 3.21
572 979 3.994204 TGCATCACCAATGATACATGC 57.006 42.857 0.00 0.00 44.13 4.06
573 980 3.558033 TGCATCACCAATGATACATGCT 58.442 40.909 0.00 0.00 44.13 3.79
574 981 3.955551 TGCATCACCAATGATACATGCTT 59.044 39.130 0.00 0.00 44.13 3.91
575 982 4.403113 TGCATCACCAATGATACATGCTTT 59.597 37.500 0.00 0.00 44.13 3.51
576 983 4.980434 GCATCACCAATGATACATGCTTTC 59.020 41.667 0.00 0.00 44.13 2.62
600 1007 7.649715 TCTACTCCCTCCGTTCCATAATATAT 58.350 38.462 0.00 0.00 0.00 0.86
633 1682 5.828859 AGAGCTTTCACTACGGACTACATAT 59.171 40.000 0.00 0.00 0.00 1.78
634 1683 6.016943 AGAGCTTTCACTACGGACTACATATC 60.017 42.308 0.00 0.00 0.00 1.63
642 1691 7.277319 TCACTACGGACTACATATCGATGTATC 59.723 40.741 8.54 4.55 45.42 2.24
703 1752 7.024340 TCCGTATGTAGTCTGTAGTTGAATC 57.976 40.000 0.00 0.00 0.00 2.52
784 1833 9.455847 GCTCTATTTGGCTTGTTAATTAATCAG 57.544 33.333 0.31 2.15 0.00 2.90
812 1868 3.090504 GAGACCCTTCTCCAACCCT 57.909 57.895 0.00 0.00 42.42 4.34
901 1961 4.344237 CCATCCTTGGCCTTGTCC 57.656 61.111 3.32 0.00 35.85 4.02
902 1962 1.693640 CCATCCTTGGCCTTGTCCT 59.306 57.895 3.32 0.00 35.85 3.85
903 1963 0.918983 CCATCCTTGGCCTTGTCCTA 59.081 55.000 3.32 0.00 35.85 2.94
904 1964 1.284785 CCATCCTTGGCCTTGTCCTAA 59.715 52.381 3.32 0.00 35.85 2.69
905 1965 2.369394 CATCCTTGGCCTTGTCCTAAC 58.631 52.381 3.32 0.00 0.00 2.34
906 1966 0.696501 TCCTTGGCCTTGTCCTAACC 59.303 55.000 3.32 0.00 0.00 2.85
907 1967 0.404040 CCTTGGCCTTGTCCTAACCA 59.596 55.000 3.32 0.00 0.00 3.67
908 1968 1.203001 CCTTGGCCTTGTCCTAACCAA 60.203 52.381 3.32 0.00 38.04 3.67
909 1969 1.886542 CTTGGCCTTGTCCTAACCAAC 59.113 52.381 3.32 0.00 35.53 3.77
910 1970 0.847373 TGGCCTTGTCCTAACCAACA 59.153 50.000 3.32 0.00 0.00 3.33
911 1971 1.244816 GGCCTTGTCCTAACCAACAC 58.755 55.000 0.00 0.00 0.00 3.32
912 1972 1.477923 GGCCTTGTCCTAACCAACACA 60.478 52.381 0.00 0.00 0.00 3.72
913 1973 2.303175 GCCTTGTCCTAACCAACACAA 58.697 47.619 0.00 0.00 0.00 3.33
940 2000 2.997315 CGCAGACCACTCCCTCCA 60.997 66.667 0.00 0.00 0.00 3.86
942 2002 1.524482 GCAGACCACTCCCTCCATC 59.476 63.158 0.00 0.00 0.00 3.51
943 2003 1.977293 GCAGACCACTCCCTCCATCC 61.977 65.000 0.00 0.00 0.00 3.51
944 2004 0.618680 CAGACCACTCCCTCCATCCA 60.619 60.000 0.00 0.00 0.00 3.41
945 2005 0.618968 AGACCACTCCCTCCATCCAC 60.619 60.000 0.00 0.00 0.00 4.02
948 2008 1.341156 CCACTCCCTCCATCCACCTC 61.341 65.000 0.00 0.00 0.00 3.85
982 2042 0.460635 GCAGCAGAGAAGAGCAGAGG 60.461 60.000 0.00 0.00 0.00 3.69
988 2048 1.005805 AGAGAAGAGCAGAGGAGAGCA 59.994 52.381 0.00 0.00 0.00 4.26
989 2049 1.824230 GAGAAGAGCAGAGGAGAGCAA 59.176 52.381 0.00 0.00 0.00 3.91
990 2050 1.826720 AGAAGAGCAGAGGAGAGCAAG 59.173 52.381 0.00 0.00 0.00 4.01
991 2051 1.824230 GAAGAGCAGAGGAGAGCAAGA 59.176 52.381 0.00 0.00 0.00 3.02
992 2052 1.935799 AGAGCAGAGGAGAGCAAGAA 58.064 50.000 0.00 0.00 0.00 2.52
994 2054 2.234414 AGAGCAGAGGAGAGCAAGAAAG 59.766 50.000 0.00 0.00 0.00 2.62
1206 2284 1.444553 GGACGAGCTCAAGTCCGTG 60.445 63.158 20.69 2.68 46.08 4.94
1380 2458 2.341101 CGAGTGGCTGGTACGTCCT 61.341 63.158 0.00 0.00 37.07 3.85
1381 2459 1.874345 CGAGTGGCTGGTACGTCCTT 61.874 60.000 0.00 0.00 37.07 3.36
1382 2460 0.108756 GAGTGGCTGGTACGTCCTTC 60.109 60.000 0.00 0.00 37.07 3.46
1384 2462 1.180029 GTGGCTGGTACGTCCTTCTA 58.820 55.000 0.00 0.00 37.07 2.10
1385 2463 1.135170 GTGGCTGGTACGTCCTTCTAC 60.135 57.143 0.00 0.00 37.07 2.59
1386 2464 0.459078 GGCTGGTACGTCCTTCTACC 59.541 60.000 0.00 0.00 37.07 3.18
1388 2466 1.823610 GCTGGTACGTCCTTCTACCTT 59.176 52.381 0.00 0.00 34.52 3.50
1391 2469 1.403323 GGTACGTCCTTCTACCTTCGG 59.597 57.143 0.00 0.00 31.20 4.30
1392 2470 2.087646 GTACGTCCTTCTACCTTCGGT 58.912 52.381 0.00 0.00 40.16 4.69
1393 2471 1.625511 ACGTCCTTCTACCTTCGGTT 58.374 50.000 0.00 0.00 37.09 4.44
1394 2472 1.271656 ACGTCCTTCTACCTTCGGTTG 59.728 52.381 0.00 0.00 37.09 3.77
1397 2475 0.613777 CCTTCTACCTTCGGTTGGCT 59.386 55.000 0.00 0.00 37.09 4.75
1398 2476 1.829222 CCTTCTACCTTCGGTTGGCTA 59.171 52.381 0.00 0.00 37.09 3.93
1399 2477 2.159085 CCTTCTACCTTCGGTTGGCTAG 60.159 54.545 0.00 0.00 37.09 3.42
1400 2478 2.226962 TCTACCTTCGGTTGGCTAGT 57.773 50.000 0.00 0.00 37.09 2.57
1401 2479 2.532843 TCTACCTTCGGTTGGCTAGTT 58.467 47.619 0.00 0.00 37.09 2.24
1403 2481 0.037605 ACCTTCGGTTGGCTAGTTCG 60.038 55.000 0.00 0.00 27.29 3.95
1404 2482 0.037605 CCTTCGGTTGGCTAGTTCGT 60.038 55.000 0.00 0.00 0.00 3.85
1405 2483 1.607251 CCTTCGGTTGGCTAGTTCGTT 60.607 52.381 0.00 0.00 0.00 3.85
1406 2484 1.459592 CTTCGGTTGGCTAGTTCGTTG 59.540 52.381 0.00 0.00 0.00 4.10
1407 2485 0.675083 TCGGTTGGCTAGTTCGTTGA 59.325 50.000 0.00 0.00 0.00 3.18
1411 2489 3.335579 GGTTGGCTAGTTCGTTGATTCT 58.664 45.455 0.00 0.00 0.00 2.40
1412 2490 3.751698 GGTTGGCTAGTTCGTTGATTCTT 59.248 43.478 0.00 0.00 0.00 2.52
1413 2491 4.215613 GGTTGGCTAGTTCGTTGATTCTTT 59.784 41.667 0.00 0.00 0.00 2.52
1414 2492 5.147162 GTTGGCTAGTTCGTTGATTCTTTG 58.853 41.667 0.00 0.00 0.00 2.77
1415 2493 4.637276 TGGCTAGTTCGTTGATTCTTTGA 58.363 39.130 0.00 0.00 0.00 2.69
1416 2494 5.245531 TGGCTAGTTCGTTGATTCTTTGAT 58.754 37.500 0.00 0.00 0.00 2.57
1418 2496 5.447818 GGCTAGTTCGTTGATTCTTTGATGG 60.448 44.000 0.00 0.00 0.00 3.51
1419 2497 5.351465 GCTAGTTCGTTGATTCTTTGATGGA 59.649 40.000 0.00 0.00 0.00 3.41
1420 2498 6.037610 GCTAGTTCGTTGATTCTTTGATGGAT 59.962 38.462 0.00 0.00 0.00 3.41
1421 2499 6.187125 AGTTCGTTGATTCTTTGATGGATG 57.813 37.500 0.00 0.00 0.00 3.51
1422 2500 5.124457 AGTTCGTTGATTCTTTGATGGATGG 59.876 40.000 0.00 0.00 0.00 3.51
1424 2502 5.439721 TCGTTGATTCTTTGATGGATGGAT 58.560 37.500 0.00 0.00 0.00 3.41
1425 2503 5.297527 TCGTTGATTCTTTGATGGATGGATG 59.702 40.000 0.00 0.00 0.00 3.51
1426 2504 5.506815 CGTTGATTCTTTGATGGATGGATGG 60.507 44.000 0.00 0.00 0.00 3.51
1427 2505 5.391577 TGATTCTTTGATGGATGGATGGA 57.608 39.130 0.00 0.00 0.00 3.41
1428 2506 5.960704 TGATTCTTTGATGGATGGATGGAT 58.039 37.500 0.00 0.00 0.00 3.41
1429 2507 5.773176 TGATTCTTTGATGGATGGATGGATG 59.227 40.000 0.00 0.00 0.00 3.51
1431 2509 3.723154 TCTTTGATGGATGGATGGATGGA 59.277 43.478 0.00 0.00 0.00 3.41
1433 2511 3.732048 TGATGGATGGATGGATGGATG 57.268 47.619 0.00 0.00 0.00 3.51
1435 2513 0.406750 TGGATGGATGGATGGATGGC 59.593 55.000 0.00 0.00 0.00 4.40
1437 2515 1.616187 GGATGGATGGATGGATGGCTG 60.616 57.143 0.00 0.00 0.00 4.85
1438 2516 1.353358 GATGGATGGATGGATGGCTGA 59.647 52.381 0.00 0.00 0.00 4.26
1441 2519 2.168496 GGATGGATGGATGGCTGATTG 58.832 52.381 0.00 0.00 0.00 2.67
1442 2520 2.168496 GATGGATGGATGGCTGATTGG 58.832 52.381 0.00 0.00 0.00 3.16
1443 2521 0.928505 TGGATGGATGGCTGATTGGT 59.071 50.000 0.00 0.00 0.00 3.67
1446 2524 2.767960 GGATGGATGGCTGATTGGTTTT 59.232 45.455 0.00 0.00 0.00 2.43
1448 2543 4.405358 GGATGGATGGCTGATTGGTTTTTA 59.595 41.667 0.00 0.00 0.00 1.52
1456 2551 4.244862 GCTGATTGGTTTTTATGGTGTGG 58.755 43.478 0.00 0.00 0.00 4.17
1615 2713 3.244249 ACCTCTTCAACAGTAAGCACTCC 60.244 47.826 0.00 0.00 30.46 3.85
1669 2791 3.274393 GATCGATCGACTGGGTTGG 57.726 57.895 22.06 0.00 0.00 3.77
1670 2792 0.460311 GATCGATCGACTGGGTTGGT 59.540 55.000 22.06 0.00 0.00 3.67
1671 2793 0.175760 ATCGATCGACTGGGTTGGTG 59.824 55.000 22.06 0.00 0.00 4.17
1672 2794 0.896479 TCGATCGACTGGGTTGGTGA 60.896 55.000 15.15 0.00 0.00 4.02
1673 2795 0.175760 CGATCGACTGGGTTGGTGAT 59.824 55.000 10.26 0.00 0.00 3.06
1850 2972 1.064946 CGACTCGGTGAGCTCCATC 59.935 63.158 12.15 1.59 32.04 3.51
1851 2973 1.380403 CGACTCGGTGAGCTCCATCT 61.380 60.000 12.15 0.00 32.04 2.90
1854 2976 0.385029 CTCGGTGAGCTCCATCTCTG 59.615 60.000 12.15 2.23 34.29 3.35
1855 2977 0.323816 TCGGTGAGCTCCATCTCTGT 60.324 55.000 12.15 0.00 34.29 3.41
1859 2988 2.170187 GGTGAGCTCCATCTCTGTTCAT 59.830 50.000 12.15 0.00 34.29 2.57
1874 3003 2.028125 TTCATCCACCCGCTCGATCC 62.028 60.000 0.00 0.00 0.00 3.36
1987 3728 1.135689 GCCGTCCACTTTGCTGTATTG 60.136 52.381 0.00 0.00 0.00 1.90
1989 3730 3.331150 CCGTCCACTTTGCTGTATTGTA 58.669 45.455 0.00 0.00 0.00 2.41
2028 3773 2.198827 TGTTATGGTTGCTGGTCTGG 57.801 50.000 0.00 0.00 0.00 3.86
2107 3857 2.222819 GCCTCGCTCAGTTTACAATTCG 60.223 50.000 0.00 0.00 0.00 3.34
2146 3896 3.670055 CGTGCGAAAATTCAGATTTTGCT 59.330 39.130 11.31 0.00 43.61 3.91
2328 4179 6.542005 CCAACCACTATTATAATGCACAGACA 59.458 38.462 8.28 0.00 0.00 3.41
2335 4186 3.526931 ATAATGCACAGACAGTACGCT 57.473 42.857 0.00 0.00 0.00 5.07
2340 4191 2.159379 TGCACAGACAGTACGCTCATAG 60.159 50.000 0.00 0.00 0.00 2.23
2341 4192 2.159366 GCACAGACAGTACGCTCATAGT 60.159 50.000 0.00 0.00 0.00 2.12
2342 4193 3.686128 CACAGACAGTACGCTCATAGTC 58.314 50.000 0.00 0.00 0.00 2.59
2343 4194 3.127030 CACAGACAGTACGCTCATAGTCA 59.873 47.826 0.00 0.00 0.00 3.41
2344 4195 3.948473 ACAGACAGTACGCTCATAGTCAT 59.052 43.478 0.00 0.00 0.00 3.06
2351 4202 1.959985 ACGCTCATAGTCATAGCAGCT 59.040 47.619 0.00 0.00 35.98 4.24
2500 4392 3.733443 ATTTGCTGACCTTGGTTTGAC 57.267 42.857 0.00 0.00 0.00 3.18
3172 5075 1.068083 CCCCGGTGTGATCTGATCG 59.932 63.158 12.65 1.34 0.00 3.69
3231 5163 7.857885 GTGACGATCTGTTCTTTGATTCTTTTT 59.142 33.333 0.00 0.00 0.00 1.94
3267 5207 7.299787 TCTTTGATGTCATTTCATTCTCTCG 57.700 36.000 0.00 0.00 0.00 4.04
3283 5224 3.510360 TCTCTCGAGAACTTTTAGGGTGG 59.490 47.826 17.36 0.00 33.91 4.61
3286 5227 4.021368 TCTCGAGAACTTTTAGGGTGGAAG 60.021 45.833 14.01 0.00 0.00 3.46
3322 5263 9.407380 TCCATTTTTGTTGCAGATATATGTACT 57.593 29.630 0.00 0.00 0.00 2.73
3363 5304 1.486310 TGATGCCATACCTCCTGTGAC 59.514 52.381 0.00 0.00 0.00 3.67
3364 5305 0.839946 ATGCCATACCTCCTGTGACC 59.160 55.000 0.00 0.00 0.00 4.02
3365 5306 0.252696 TGCCATACCTCCTGTGACCT 60.253 55.000 0.00 0.00 0.00 3.85
3366 5307 0.179000 GCCATACCTCCTGTGACCTG 59.821 60.000 0.00 0.00 0.00 4.00
3427 5374 7.959658 ATTCATGTGAATTCCAATGGACTAA 57.040 32.000 0.00 0.00 41.64 2.24
3442 5389 4.789784 TGGACTAATTTTTGCAACGTAGC 58.210 39.130 0.00 0.00 0.00 3.58
3463 5410 5.806089 GCAAAAATACATGCTATTACGCC 57.194 39.130 0.00 0.00 39.46 5.68
3464 5411 4.378616 GCAAAAATACATGCTATTACGCCG 59.621 41.667 0.00 0.00 39.46 6.46
3465 5412 5.507077 CAAAAATACATGCTATTACGCCGT 58.493 37.500 0.00 0.00 0.00 5.68
3466 5413 5.744666 AAAATACATGCTATTACGCCGTT 57.255 34.783 0.00 0.00 0.00 4.44
3467 5414 4.725556 AATACATGCTATTACGCCGTTG 57.274 40.909 0.00 0.00 0.00 4.10
3468 5415 2.018542 ACATGCTATTACGCCGTTGT 57.981 45.000 0.00 0.00 0.00 3.32
3469 5416 1.663643 ACATGCTATTACGCCGTTGTG 59.336 47.619 0.00 0.00 0.00 3.33
3470 5417 1.930503 CATGCTATTACGCCGTTGTGA 59.069 47.619 0.00 0.00 0.00 3.58
3471 5418 1.352114 TGCTATTACGCCGTTGTGAC 58.648 50.000 0.00 0.00 0.00 3.67
3472 5419 0.648958 GCTATTACGCCGTTGTGACC 59.351 55.000 0.00 0.00 0.00 4.02
3476 5423 3.869473 TACGCCGTTGTGACCTGCC 62.869 63.158 0.00 0.00 0.00 4.85
3477 5424 4.988598 CGCCGTTGTGACCTGCCT 62.989 66.667 0.00 0.00 0.00 4.75
3483 5430 2.354303 CCGTTGTGACCTGCCTGTATTA 60.354 50.000 0.00 0.00 0.00 0.98
3485 5432 3.670625 GTTGTGACCTGCCTGTATTACA 58.329 45.455 0.00 0.00 0.00 2.41
3486 5433 3.328382 TGTGACCTGCCTGTATTACAC 57.672 47.619 0.00 0.00 0.00 2.90
3487 5434 2.635427 TGTGACCTGCCTGTATTACACA 59.365 45.455 0.00 0.00 35.24 3.72
3493 5440 5.076873 ACCTGCCTGTATTACACATTTGTT 58.923 37.500 0.00 0.00 36.29 2.83
3495 5442 6.150474 ACCTGCCTGTATTACACATTTGTTAC 59.850 38.462 0.00 0.00 36.29 2.50
3496 5443 6.404293 CCTGCCTGTATTACACATTTGTTACC 60.404 42.308 0.00 0.00 36.29 2.85
3497 5444 6.004574 TGCCTGTATTACACATTTGTTACCA 58.995 36.000 0.00 0.00 36.29 3.25
3500 5447 8.342634 GCCTGTATTACACATTTGTTACCATAG 58.657 37.037 0.00 0.00 36.29 2.23
3501 5448 9.607988 CCTGTATTACACATTTGTTACCATAGA 57.392 33.333 0.00 0.00 36.29 1.98
3504 5451 9.910511 GTATTACACATTTGTTACCATAGAACG 57.089 33.333 0.00 0.00 37.15 3.95
3505 5452 8.780846 ATTACACATTTGTTACCATAGAACGA 57.219 30.769 0.00 0.00 37.15 3.85
3506 5453 8.604640 TTACACATTTGTTACCATAGAACGAA 57.395 30.769 0.00 0.00 37.15 3.85
3507 5454 7.129109 ACACATTTGTTACCATAGAACGAAG 57.871 36.000 0.00 0.00 34.46 3.79
3508 5455 6.932400 ACACATTTGTTACCATAGAACGAAGA 59.068 34.615 0.00 0.00 34.46 2.87
3509 5456 7.442969 ACACATTTGTTACCATAGAACGAAGAA 59.557 33.333 0.00 0.00 34.46 2.52
3510 5457 7.957484 CACATTTGTTACCATAGAACGAAGAAG 59.043 37.037 0.00 0.00 34.46 2.85
3511 5458 7.660208 ACATTTGTTACCATAGAACGAAGAAGT 59.340 33.333 0.00 0.00 34.46 3.01
3512 5459 9.146984 CATTTGTTACCATAGAACGAAGAAGTA 57.853 33.333 0.00 0.00 34.46 2.24
3513 5460 9.715121 ATTTGTTACCATAGAACGAAGAAGTAA 57.285 29.630 0.00 0.00 34.46 2.24
3514 5461 8.752766 TTGTTACCATAGAACGAAGAAGTAAG 57.247 34.615 0.00 0.00 0.00 2.34
3516 5463 8.746530 TGTTACCATAGAACGAAGAAGTAAGAT 58.253 33.333 0.00 0.00 0.00 2.40
3517 5464 9.021863 GTTACCATAGAACGAAGAAGTAAGATG 57.978 37.037 0.00 0.00 0.00 2.90
3519 5466 7.036220 ACCATAGAACGAAGAAGTAAGATGTG 58.964 38.462 0.00 0.00 0.00 3.21
3520 5467 6.019479 CCATAGAACGAAGAAGTAAGATGTGC 60.019 42.308 0.00 0.00 0.00 4.57
3522 5469 5.542779 AGAACGAAGAAGTAAGATGTGCTT 58.457 37.500 0.00 0.00 40.68 3.91
3523 5470 5.635700 AGAACGAAGAAGTAAGATGTGCTTC 59.364 40.000 0.00 0.00 46.29 3.86
3542 5499 7.389330 TGTGCTTCATCCGTTAATTAAGAAGAA 59.611 33.333 20.18 11.99 34.47 2.52
3544 5501 8.450964 TGCTTCATCCGTTAATTAAGAAGAAAG 58.549 33.333 20.18 11.95 34.47 2.62
3563 5520 8.506168 AAGAAAGAAGAGTGTTACAAATGTCA 57.494 30.769 0.00 0.00 0.00 3.58
3564 5521 8.147642 AGAAAGAAGAGTGTTACAAATGTCAG 57.852 34.615 0.00 0.00 0.00 3.51
3565 5522 6.867662 AAGAAGAGTGTTACAAATGTCAGG 57.132 37.500 0.00 0.00 0.00 3.86
3567 5524 6.357367 AGAAGAGTGTTACAAATGTCAGGTT 58.643 36.000 0.00 0.00 0.00 3.50
3590 5547 9.093970 GGTTATGTTACAAAATTCATTTAGGGC 57.906 33.333 0.00 0.00 0.00 5.19
3591 5548 9.646427 GTTATGTTACAAAATTCATTTAGGGCA 57.354 29.630 0.00 0.00 0.00 5.36
3593 5550 8.947055 ATGTTACAAAATTCATTTAGGGCATC 57.053 30.769 0.00 0.00 0.00 3.91
3594 5551 7.327214 TGTTACAAAATTCATTTAGGGCATCC 58.673 34.615 0.00 0.00 0.00 3.51
3595 5552 5.357742 ACAAAATTCATTTAGGGCATCCC 57.642 39.130 0.00 0.00 45.90 3.85
3611 5568 4.323477 CCCACGCCGACCCTCAAA 62.323 66.667 0.00 0.00 0.00 2.69
3612 5569 3.047877 CCACGCCGACCCTCAAAC 61.048 66.667 0.00 0.00 0.00 2.93
3613 5570 3.047877 CACGCCGACCCTCAAACC 61.048 66.667 0.00 0.00 0.00 3.27
3614 5571 4.675029 ACGCCGACCCTCAAACCG 62.675 66.667 0.00 0.00 0.00 4.44
3615 5572 4.675029 CGCCGACCCTCAAACCGT 62.675 66.667 0.00 0.00 0.00 4.83
3616 5573 2.281276 GCCGACCCTCAAACCGTT 60.281 61.111 0.00 0.00 0.00 4.44
3617 5574 1.895231 GCCGACCCTCAAACCGTTT 60.895 57.895 0.00 0.00 0.00 3.60
3618 5575 1.946267 CCGACCCTCAAACCGTTTG 59.054 57.895 16.53 16.53 41.96 2.93
3619 5576 0.816421 CCGACCCTCAAACCGTTTGT 60.816 55.000 20.71 4.47 41.36 2.83
3620 5577 0.306533 CGACCCTCAAACCGTTTGTG 59.693 55.000 20.71 18.21 41.36 3.33
3621 5578 1.670791 GACCCTCAAACCGTTTGTGA 58.329 50.000 21.93 6.56 41.36 3.58
3622 5579 1.332686 GACCCTCAAACCGTTTGTGAC 59.667 52.381 21.93 12.06 41.36 3.67
3623 5580 1.340211 ACCCTCAAACCGTTTGTGACA 60.340 47.619 21.93 5.54 41.36 3.58
3624 5581 1.333619 CCCTCAAACCGTTTGTGACAG 59.666 52.381 21.93 13.18 41.36 3.51
3625 5582 2.014128 CCTCAAACCGTTTGTGACAGT 58.986 47.619 21.93 0.00 41.36 3.55
3626 5583 2.031683 CCTCAAACCGTTTGTGACAGTC 59.968 50.000 21.93 0.00 41.36 3.51
3627 5584 2.011222 TCAAACCGTTTGTGACAGTCC 58.989 47.619 20.71 0.00 41.36 3.85
3628 5585 1.011333 AAACCGTTTGTGACAGTCCG 58.989 50.000 0.00 0.00 0.00 4.79
3629 5586 0.812412 AACCGTTTGTGACAGTCCGG 60.812 55.000 15.06 15.06 41.09 5.14
3630 5587 1.068417 CCGTTTGTGACAGTCCGGA 59.932 57.895 0.00 0.00 37.66 5.14
3631 5588 1.219522 CCGTTTGTGACAGTCCGGAC 61.220 60.000 27.67 27.67 37.66 4.79
3632 5589 1.219522 CGTTTGTGACAGTCCGGACC 61.220 60.000 30.82 16.33 0.00 4.46
3633 5590 1.068417 TTTGTGACAGTCCGGACCG 59.932 57.895 30.82 23.71 0.00 4.79
3634 5591 2.981977 TTTGTGACAGTCCGGACCGC 62.982 60.000 30.82 21.38 0.00 5.68
3652 5609 2.968697 GCGGTCCGGACGTGTTTT 60.969 61.111 27.68 0.00 0.00 2.43
3653 5610 2.932905 CGGTCCGGACGTGTTTTG 59.067 61.111 27.68 7.80 0.00 2.44
3654 5611 2.635338 GGTCCGGACGTGTTTTGC 59.365 61.111 27.68 7.98 0.00 3.68
3655 5612 2.181521 GGTCCGGACGTGTTTTGCA 61.182 57.895 27.68 0.00 0.00 4.08
3656 5613 1.716826 GGTCCGGACGTGTTTTGCAA 61.717 55.000 27.68 0.00 0.00 4.08
3657 5614 0.309612 GTCCGGACGTGTTTTGCAAT 59.690 50.000 20.85 0.00 0.00 3.56
3658 5615 1.025812 TCCGGACGTGTTTTGCAATT 58.974 45.000 0.00 0.00 0.00 2.32
3659 5616 1.002251 TCCGGACGTGTTTTGCAATTC 60.002 47.619 0.00 0.00 0.00 2.17
3660 5617 1.268794 CCGGACGTGTTTTGCAATTCA 60.269 47.619 0.00 0.00 0.00 2.57
3661 5618 2.455032 CGGACGTGTTTTGCAATTCAA 58.545 42.857 0.00 0.00 0.00 2.69
3662 5619 2.215363 CGGACGTGTTTTGCAATTCAAC 59.785 45.455 0.00 2.39 33.73 3.18
3663 5620 3.182967 GGACGTGTTTTGCAATTCAACA 58.817 40.909 10.41 10.41 33.73 3.33
3664 5621 3.000177 GGACGTGTTTTGCAATTCAACAC 60.000 43.478 25.50 25.50 44.54 3.32
3666 5623 3.567670 GTGTTTTGCAATTCAACACGG 57.432 42.857 22.86 0.00 40.56 4.94
3667 5624 2.926838 GTGTTTTGCAATTCAACACGGT 59.073 40.909 22.86 0.00 40.56 4.83
3668 5625 3.000177 GTGTTTTGCAATTCAACACGGTC 60.000 43.478 22.86 7.24 40.56 4.79
3669 5626 2.500509 TTTGCAATTCAACACGGTCC 57.499 45.000 0.00 0.00 33.73 4.46
3670 5627 1.686355 TTGCAATTCAACACGGTCCT 58.314 45.000 0.00 0.00 0.00 3.85
3671 5628 0.950836 TGCAATTCAACACGGTCCTG 59.049 50.000 0.00 0.00 0.00 3.86
3672 5629 0.951558 GCAATTCAACACGGTCCTGT 59.048 50.000 0.00 0.00 0.00 4.00
3673 5630 2.147958 GCAATTCAACACGGTCCTGTA 58.852 47.619 0.00 0.00 0.00 2.74
3674 5631 2.747446 GCAATTCAACACGGTCCTGTAT 59.253 45.455 0.00 0.00 0.00 2.29
3675 5632 3.181510 GCAATTCAACACGGTCCTGTATC 60.182 47.826 0.00 0.00 0.00 2.24
3676 5633 2.357327 TTCAACACGGTCCTGTATCG 57.643 50.000 0.00 0.00 37.86 2.92
3677 5634 0.528924 TCAACACGGTCCTGTATCGG 59.471 55.000 0.00 0.00 35.41 4.18
3678 5635 0.245539 CAACACGGTCCTGTATCGGT 59.754 55.000 0.00 0.00 35.41 4.69
3679 5636 0.971386 AACACGGTCCTGTATCGGTT 59.029 50.000 0.00 0.00 35.41 4.44
3680 5637 0.529378 ACACGGTCCTGTATCGGTTC 59.471 55.000 0.00 0.00 35.41 3.62
3681 5638 0.524816 CACGGTCCTGTATCGGTTCG 60.525 60.000 0.00 0.00 35.41 3.95
3682 5639 0.962356 ACGGTCCTGTATCGGTTCGT 60.962 55.000 0.00 0.00 35.41 3.85
3683 5640 0.248377 CGGTCCTGTATCGGTTCGTC 60.248 60.000 0.00 0.00 0.00 4.20
3684 5641 0.813184 GGTCCTGTATCGGTTCGTCA 59.187 55.000 0.00 0.00 0.00 4.35
3685 5642 1.203052 GGTCCTGTATCGGTTCGTCAA 59.797 52.381 0.00 0.00 0.00 3.18
3686 5643 2.257034 GTCCTGTATCGGTTCGTCAAC 58.743 52.381 0.00 0.00 0.00 3.18
3695 5652 3.980583 GTTCGTCAACCAGACTGGA 57.019 52.632 28.56 2.45 45.32 3.86
3696 5653 1.499049 GTTCGTCAACCAGACTGGAC 58.501 55.000 28.56 14.55 45.32 4.02
3697 5654 4.245054 CGTCAACCAGACTGGACG 57.755 61.111 28.56 22.01 45.32 4.79
3698 5655 1.362717 CGTCAACCAGACTGGACGT 59.637 57.895 28.56 9.72 45.73 4.34
3699 5656 0.594602 CGTCAACCAGACTGGACGTA 59.405 55.000 28.56 7.44 45.73 3.57
3700 5657 1.201647 CGTCAACCAGACTGGACGTAT 59.798 52.381 28.56 1.60 45.73 3.06
3701 5658 2.352421 CGTCAACCAGACTGGACGTATT 60.352 50.000 28.56 8.49 45.73 1.89
3702 5659 3.660865 GTCAACCAGACTGGACGTATTT 58.339 45.455 28.56 7.73 44.09 1.40
3703 5660 4.062991 GTCAACCAGACTGGACGTATTTT 58.937 43.478 28.56 6.97 44.09 1.82
3704 5661 4.514066 GTCAACCAGACTGGACGTATTTTT 59.486 41.667 28.56 6.20 44.09 1.94
3705 5662 4.753107 TCAACCAGACTGGACGTATTTTTC 59.247 41.667 28.56 0.00 40.96 2.29
3706 5663 3.671716 ACCAGACTGGACGTATTTTTCC 58.328 45.455 28.56 0.00 40.96 3.13
3707 5664 3.007635 CCAGACTGGACGTATTTTTCCC 58.992 50.000 17.22 0.00 40.96 3.97
3708 5665 2.671396 CAGACTGGACGTATTTTTCCCG 59.329 50.000 0.00 0.00 0.00 5.14
3709 5666 1.395954 GACTGGACGTATTTTTCCCGC 59.604 52.381 0.00 0.00 0.00 6.13
3710 5667 1.270947 ACTGGACGTATTTTTCCCGCA 60.271 47.619 0.00 0.00 0.00 5.69
4013 5970 4.090723 CGACCAAAAACCCTCCCC 57.909 61.111 0.00 0.00 0.00 4.81
4014 5971 1.605451 CGACCAAAAACCCTCCCCC 60.605 63.158 0.00 0.00 0.00 5.40
4015 5972 1.858505 GACCAAAAACCCTCCCCCT 59.141 57.895 0.00 0.00 0.00 4.79
4016 5973 0.251653 GACCAAAAACCCTCCCCCTC 60.252 60.000 0.00 0.00 0.00 4.30
4017 5974 1.304134 CCAAAAACCCTCCCCCTCG 60.304 63.158 0.00 0.00 0.00 4.63
4018 5975 1.458927 CAAAAACCCTCCCCCTCGT 59.541 57.895 0.00 0.00 0.00 4.18
4019 5976 0.608308 CAAAAACCCTCCCCCTCGTC 60.608 60.000 0.00 0.00 0.00 4.20
4020 5977 1.786407 AAAAACCCTCCCCCTCGTCC 61.786 60.000 0.00 0.00 0.00 4.79
4039 5996 2.668212 CGCGCTTTCCCACCTGAA 60.668 61.111 5.56 0.00 0.00 3.02
4040 5997 2.680913 CGCGCTTTCCCACCTGAAG 61.681 63.158 5.56 0.00 0.00 3.02
4041 5998 2.982744 GCGCTTTCCCACCTGAAGC 61.983 63.158 0.00 0.00 41.69 3.86
4042 5999 2.335712 CGCTTTCCCACCTGAAGCC 61.336 63.158 0.00 0.00 42.01 4.35
4043 6000 1.228552 GCTTTCCCACCTGAAGCCA 60.229 57.895 0.00 0.00 39.79 4.75
4044 6001 1.246737 GCTTTCCCACCTGAAGCCAG 61.247 60.000 0.00 0.00 39.79 4.85
4045 6002 1.228552 TTTCCCACCTGAAGCCAGC 60.229 57.895 0.00 0.00 39.07 4.85
4046 6003 1.719063 TTTCCCACCTGAAGCCAGCT 61.719 55.000 0.00 0.00 39.07 4.24
4047 6004 2.360852 CCCACCTGAAGCCAGCTG 60.361 66.667 6.78 6.78 39.07 4.24
4048 6005 3.060615 CCACCTGAAGCCAGCTGC 61.061 66.667 8.66 3.91 39.07 5.25
4049 6006 3.060615 CACCTGAAGCCAGCTGCC 61.061 66.667 8.66 0.00 42.71 4.85
4050 6007 4.357279 ACCTGAAGCCAGCTGCCC 62.357 66.667 8.66 0.77 42.71 5.36
4051 6008 4.355720 CCTGAAGCCAGCTGCCCA 62.356 66.667 8.66 1.88 42.71 5.36
4052 6009 3.060615 CTGAAGCCAGCTGCCCAC 61.061 66.667 8.66 0.13 42.71 4.61
4053 6010 3.855503 CTGAAGCCAGCTGCCCACA 62.856 63.158 8.66 5.04 42.71 4.17
4054 6011 2.362120 GAAGCCAGCTGCCCACAT 60.362 61.111 8.66 0.00 42.71 3.21
4055 6012 1.980772 GAAGCCAGCTGCCCACATT 60.981 57.895 8.66 0.00 42.71 2.71
4056 6013 1.941999 GAAGCCAGCTGCCCACATTC 61.942 60.000 8.66 1.93 42.71 2.67
4057 6014 2.677524 GCCAGCTGCCCACATTCA 60.678 61.111 8.66 0.00 0.00 2.57
4058 6015 2.056223 GCCAGCTGCCCACATTCAT 61.056 57.895 8.66 0.00 0.00 2.57
4059 6016 1.610554 GCCAGCTGCCCACATTCATT 61.611 55.000 8.66 0.00 0.00 2.57
4060 6017 0.458669 CCAGCTGCCCACATTCATTC 59.541 55.000 8.66 0.00 0.00 2.67
4061 6018 1.179152 CAGCTGCCCACATTCATTCA 58.821 50.000 0.00 0.00 0.00 2.57
4062 6019 1.754803 CAGCTGCCCACATTCATTCAT 59.245 47.619 0.00 0.00 0.00 2.57
4063 6020 1.754803 AGCTGCCCACATTCATTCATG 59.245 47.619 0.00 0.00 0.00 3.07
4064 6021 1.479323 GCTGCCCACATTCATTCATGT 59.521 47.619 0.00 0.00 37.93 3.21
4065 6022 2.480759 GCTGCCCACATTCATTCATGTC 60.481 50.000 0.00 0.00 35.03 3.06
4066 6023 1.744522 TGCCCACATTCATTCATGTCG 59.255 47.619 0.00 0.00 35.03 4.35
4067 6024 1.534595 GCCCACATTCATTCATGTCGC 60.535 52.381 0.00 0.00 35.03 5.19
4068 6025 2.019249 CCCACATTCATTCATGTCGCT 58.981 47.619 0.00 0.00 35.03 4.93
4069 6026 2.032550 CCCACATTCATTCATGTCGCTC 59.967 50.000 0.00 0.00 35.03 5.03
4070 6027 2.941064 CCACATTCATTCATGTCGCTCT 59.059 45.455 0.00 0.00 35.03 4.09
4071 6028 4.122046 CCACATTCATTCATGTCGCTCTA 58.878 43.478 0.00 0.00 35.03 2.43
4072 6029 4.210746 CCACATTCATTCATGTCGCTCTAG 59.789 45.833 0.00 0.00 35.03 2.43
4073 6030 5.045872 CACATTCATTCATGTCGCTCTAGA 58.954 41.667 0.00 0.00 35.03 2.43
4074 6031 5.175308 CACATTCATTCATGTCGCTCTAGAG 59.825 44.000 15.85 15.85 35.03 2.43
4075 6032 6.247625 ACATTCATTCATGTCGCTCTAGAGC 61.248 44.000 31.12 31.12 39.03 4.09
4094 6051 3.430862 GCCGCTCCGCATTGACAA 61.431 61.111 0.00 0.00 0.00 3.18
4095 6052 2.480555 CCGCTCCGCATTGACAAC 59.519 61.111 0.00 0.00 0.00 3.32
4096 6053 2.096406 CGCTCCGCATTGACAACG 59.904 61.111 0.00 0.00 0.00 4.10
4098 6055 2.480555 CTCCGCATTGACAACGGC 59.519 61.111 11.38 7.75 46.49 5.68
4099 6056 3.039202 CTCCGCATTGACAACGGCC 62.039 63.158 11.38 0.00 46.49 6.13
4100 6057 4.114997 CCGCATTGACAACGGCCC 62.115 66.667 0.00 0.00 40.55 5.80
4101 6058 3.361158 CGCATTGACAACGGCCCA 61.361 61.111 0.00 0.00 0.00 5.36
4102 6059 2.568090 GCATTGACAACGGCCCAG 59.432 61.111 0.00 0.00 0.00 4.45
4103 6060 2.268076 GCATTGACAACGGCCCAGT 61.268 57.895 0.00 0.00 0.00 4.00
4104 6061 1.580942 CATTGACAACGGCCCAGTG 59.419 57.895 0.00 0.00 0.00 3.66
4105 6062 1.150536 ATTGACAACGGCCCAGTGT 59.849 52.632 0.00 0.00 0.00 3.55
4106 6063 1.172180 ATTGACAACGGCCCAGTGTG 61.172 55.000 5.39 0.00 0.00 3.82
4107 6064 2.978010 GACAACGGCCCAGTGTGG 60.978 66.667 5.39 0.00 37.25 4.17
4108 6065 3.469863 GACAACGGCCCAGTGTGGA 62.470 63.158 5.39 0.00 40.96 4.02
4109 6066 2.978010 CAACGGCCCAGTGTGGAC 60.978 66.667 0.00 0.00 40.96 4.02
4110 6067 3.484806 AACGGCCCAGTGTGGACA 61.485 61.111 0.00 0.00 40.96 4.02
4111 6068 3.767630 AACGGCCCAGTGTGGACAC 62.768 63.158 0.00 1.42 46.77 3.67
4119 6076 4.968197 GTGTGGACACGACCTCTC 57.032 61.111 0.00 0.00 37.10 3.20
4120 6077 2.038690 GTGTGGACACGACCTCTCA 58.961 57.895 0.00 0.00 37.10 3.27
4121 6078 0.318784 GTGTGGACACGACCTCTCAC 60.319 60.000 0.00 0.00 37.10 3.51
4122 6079 0.467474 TGTGGACACGACCTCTCACT 60.467 55.000 0.00 0.00 0.00 3.41
4123 6080 1.202842 TGTGGACACGACCTCTCACTA 60.203 52.381 0.00 0.00 0.00 2.74
4124 6081 1.469308 GTGGACACGACCTCTCACTAG 59.531 57.143 0.00 0.00 0.00 2.57
4125 6082 0.452585 GGACACGACCTCTCACTAGC 59.547 60.000 0.00 0.00 0.00 3.42
4126 6083 0.097325 GACACGACCTCTCACTAGCG 59.903 60.000 0.00 0.00 0.00 4.26
4127 6084 0.605860 ACACGACCTCTCACTAGCGT 60.606 55.000 0.00 0.00 0.00 5.07
4128 6085 0.097325 CACGACCTCTCACTAGCGTC 59.903 60.000 0.00 0.00 0.00 5.19
4129 6086 1.348938 CGACCTCTCACTAGCGTCG 59.651 63.158 0.00 0.00 38.21 5.12
4130 6087 1.722677 GACCTCTCACTAGCGTCGG 59.277 63.158 0.00 0.00 0.00 4.79
4131 6088 2.325666 GACCTCTCACTAGCGTCGGC 62.326 65.000 0.00 0.00 40.37 5.54
4132 6089 2.407428 CCTCTCACTAGCGTCGGCA 61.407 63.158 0.00 0.00 43.41 5.69
4133 6090 1.729470 CCTCTCACTAGCGTCGGCAT 61.729 60.000 0.00 0.00 43.41 4.40
4134 6091 0.101399 CTCTCACTAGCGTCGGCATT 59.899 55.000 0.00 0.00 43.41 3.56
4135 6092 0.179137 TCTCACTAGCGTCGGCATTG 60.179 55.000 0.00 0.00 43.41 2.82
4136 6093 0.179137 CTCACTAGCGTCGGCATTGA 60.179 55.000 0.00 0.00 43.41 2.57
4137 6094 0.457853 TCACTAGCGTCGGCATTGAC 60.458 55.000 0.00 0.00 43.41 3.18
4146 6103 4.166011 GGCATTGACGCGGCTCAC 62.166 66.667 15.80 0.00 0.00 3.51
4147 6104 4.166011 GCATTGACGCGGCTCACC 62.166 66.667 15.80 0.00 0.00 4.02
4157 6114 2.338984 GGCTCACCGTTCGAGTGT 59.661 61.111 3.54 0.00 36.58 3.55
4158 6115 2.022129 GGCTCACCGTTCGAGTGTG 61.022 63.158 3.54 4.35 36.58 3.82
4159 6116 2.658707 GCTCACCGTTCGAGTGTGC 61.659 63.158 12.57 12.57 44.46 4.57
4160 6117 1.299850 CTCACCGTTCGAGTGTGCA 60.300 57.895 3.54 0.00 36.58 4.57
4161 6118 1.278172 CTCACCGTTCGAGTGTGCAG 61.278 60.000 3.54 1.55 36.58 4.41
4162 6119 2.661866 ACCGTTCGAGTGTGCAGC 60.662 61.111 0.00 0.00 0.00 5.25
4163 6120 3.414700 CCGTTCGAGTGTGCAGCC 61.415 66.667 0.00 0.00 0.00 4.85
4164 6121 3.414700 CGTTCGAGTGTGCAGCCC 61.415 66.667 0.00 0.00 0.00 5.19
4165 6122 2.280797 GTTCGAGTGTGCAGCCCA 60.281 61.111 0.00 0.00 0.00 5.36
4166 6123 2.280797 TTCGAGTGTGCAGCCCAC 60.281 61.111 0.00 0.00 44.90 4.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 54 0.035458 CGGAGGGAATGGGATAGCAC 59.965 60.000 0.00 0.00 0.00 4.40
181 193 2.091885 GCATCCAAGGTATGAAAGGGGA 60.092 50.000 0.00 0.00 0.00 4.81
270 297 0.529378 GGATGCAGGAAGCTTGGTTG 59.471 55.000 2.10 0.00 45.94 3.77
327 354 0.690762 TGGAACCAACCCACTAGAGC 59.309 55.000 0.00 0.00 0.00 4.09
391 418 4.274459 GCTCTCATTGAACGAATATTGCCT 59.726 41.667 0.00 0.00 0.00 4.75
395 422 6.992063 AGTTGCTCTCATTGAACGAATATT 57.008 33.333 0.00 0.00 0.00 1.28
421 486 7.284074 AGCATCTTTGAGATCTTGAGATTGAT 58.716 34.615 11.53 6.23 31.32 2.57
437 810 7.171167 CACATCCTACTTCTATGAGCATCTTTG 59.829 40.741 0.00 0.00 34.92 2.77
445 818 4.689812 GCATGCACATCCTACTTCTATGAG 59.310 45.833 14.21 0.00 0.00 2.90
447 820 4.383173 TGCATGCACATCCTACTTCTATG 58.617 43.478 18.46 0.00 0.00 2.23
465 838 3.568443 TCACCCTTATGAATGCATGCAT 58.432 40.909 27.46 27.46 38.46 3.96
467 840 2.954318 ACTCACCCTTATGAATGCATGC 59.046 45.455 11.82 11.82 35.94 4.06
476 849 3.872696 TGCACATACACTCACCCTTATG 58.127 45.455 0.00 0.00 0.00 1.90
481 854 3.808728 ACATATGCACATACACTCACCC 58.191 45.455 1.58 0.00 0.00 4.61
512 885 8.775527 TGTTTATTTTTAACACAGACGCTCATA 58.224 29.630 0.00 0.00 30.96 2.15
513 886 7.644490 TGTTTATTTTTAACACAGACGCTCAT 58.356 30.769 0.00 0.00 30.96 2.90
514 887 7.017498 TGTTTATTTTTAACACAGACGCTCA 57.983 32.000 0.00 0.00 30.96 4.26
516 889 6.416750 GCTTGTTTATTTTTAACACAGACGCT 59.583 34.615 0.00 0.00 35.39 5.07
517 890 6.416750 AGCTTGTTTATTTTTAACACAGACGC 59.583 34.615 0.00 0.00 35.39 5.19
518 891 7.908193 AGCTTGTTTATTTTTAACACAGACG 57.092 32.000 0.00 0.00 35.39 4.18
567 974 1.482593 CGGAGGGAGTAGAAAGCATGT 59.517 52.381 0.00 0.00 0.00 3.21
569 976 1.867363 ACGGAGGGAGTAGAAAGCAT 58.133 50.000 0.00 0.00 0.00 3.79
570 977 1.549170 GAACGGAGGGAGTAGAAAGCA 59.451 52.381 0.00 0.00 0.00 3.91
571 978 1.134759 GGAACGGAGGGAGTAGAAAGC 60.135 57.143 0.00 0.00 0.00 3.51
572 979 2.176889 TGGAACGGAGGGAGTAGAAAG 58.823 52.381 0.00 0.00 0.00 2.62
573 980 2.314071 TGGAACGGAGGGAGTAGAAA 57.686 50.000 0.00 0.00 0.00 2.52
574 981 2.544844 ATGGAACGGAGGGAGTAGAA 57.455 50.000 0.00 0.00 0.00 2.10
575 982 3.675348 TTATGGAACGGAGGGAGTAGA 57.325 47.619 0.00 0.00 0.00 2.59
576 983 7.342284 ACATATATTATGGAACGGAGGGAGTAG 59.658 40.741 0.10 0.00 0.00 2.57
600 1007 5.694910 CCGTAGTGAAAGCTCTAAAAAGACA 59.305 40.000 0.00 0.00 0.00 3.41
613 1662 6.296365 TCGATATGTAGTCCGTAGTGAAAG 57.704 41.667 0.00 0.00 0.00 2.62
633 1682 9.529823 ACCCTAAAATATGTCTAGATACATCGA 57.470 33.333 0.00 0.00 40.52 3.59
634 1683 9.574458 CACCCTAAAATATGTCTAGATACATCG 57.426 37.037 0.00 0.00 40.52 3.84
812 1868 1.462432 TGTGGCTTCCTGGTGGGTA 60.462 57.895 0.00 0.00 36.25 3.69
889 1949 1.886542 GTTGGTTAGGACAAGGCCAAG 59.113 52.381 5.01 0.00 39.53 3.61
891 1951 0.847373 TGTTGGTTAGGACAAGGCCA 59.153 50.000 5.01 0.00 0.00 5.36
893 1953 1.975660 TGTGTTGGTTAGGACAAGGC 58.024 50.000 0.00 0.00 0.00 4.35
895 1955 3.692101 TGTGTTGTGTTGGTTAGGACAAG 59.308 43.478 0.00 0.00 0.00 3.16
897 1957 3.055021 TCTGTGTTGTGTTGGTTAGGACA 60.055 43.478 0.00 0.00 0.00 4.02
898 1958 3.537580 TCTGTGTTGTGTTGGTTAGGAC 58.462 45.455 0.00 0.00 0.00 3.85
899 1959 3.916359 TCTGTGTTGTGTTGGTTAGGA 57.084 42.857 0.00 0.00 0.00 2.94
901 1961 4.260212 CGACTTCTGTGTTGTGTTGGTTAG 60.260 45.833 0.00 0.00 0.00 2.34
902 1962 3.619483 CGACTTCTGTGTTGTGTTGGTTA 59.381 43.478 0.00 0.00 0.00 2.85
903 1963 2.418628 CGACTTCTGTGTTGTGTTGGTT 59.581 45.455 0.00 0.00 0.00 3.67
904 1964 2.006888 CGACTTCTGTGTTGTGTTGGT 58.993 47.619 0.00 0.00 0.00 3.67
905 1965 1.268032 GCGACTTCTGTGTTGTGTTGG 60.268 52.381 0.00 0.00 0.00 3.77
906 1966 1.396648 TGCGACTTCTGTGTTGTGTTG 59.603 47.619 0.00 0.00 0.00 3.33
907 1967 1.665679 CTGCGACTTCTGTGTTGTGTT 59.334 47.619 0.00 0.00 0.00 3.32
908 1968 1.134818 TCTGCGACTTCTGTGTTGTGT 60.135 47.619 0.00 0.00 0.00 3.72
909 1969 1.258982 GTCTGCGACTTCTGTGTTGTG 59.741 52.381 0.00 0.00 0.00 3.33
910 1970 1.571919 GTCTGCGACTTCTGTGTTGT 58.428 50.000 0.00 0.00 0.00 3.32
911 1971 0.861837 GGTCTGCGACTTCTGTGTTG 59.138 55.000 8.26 0.00 32.47 3.33
912 1972 0.464036 TGGTCTGCGACTTCTGTGTT 59.536 50.000 8.26 0.00 32.47 3.32
913 1973 0.249489 GTGGTCTGCGACTTCTGTGT 60.249 55.000 8.26 0.00 32.47 3.72
940 2000 1.827969 CGAGGAAGTCAAGAGGTGGAT 59.172 52.381 0.00 0.00 0.00 3.41
942 2002 0.247736 CCGAGGAAGTCAAGAGGTGG 59.752 60.000 0.00 0.00 0.00 4.61
943 2003 1.203523 CTCCGAGGAAGTCAAGAGGTG 59.796 57.143 0.00 0.00 0.00 4.00
944 2004 1.551452 CTCCGAGGAAGTCAAGAGGT 58.449 55.000 0.00 0.00 0.00 3.85
945 2005 0.174617 GCTCCGAGGAAGTCAAGAGG 59.825 60.000 0.00 0.00 0.00 3.69
948 2008 0.739112 GCTGCTCCGAGGAAGTCAAG 60.739 60.000 0.00 0.00 0.00 3.02
982 2042 2.937799 CCATCTCTGCTTTCTTGCTCTC 59.062 50.000 0.00 0.00 0.00 3.20
988 2048 2.376518 TGAACCCCATCTCTGCTTTCTT 59.623 45.455 0.00 0.00 0.00 2.52
989 2049 1.988107 TGAACCCCATCTCTGCTTTCT 59.012 47.619 0.00 0.00 0.00 2.52
990 2050 2.363683 CTGAACCCCATCTCTGCTTTC 58.636 52.381 0.00 0.00 0.00 2.62
991 2051 1.005215 CCTGAACCCCATCTCTGCTTT 59.995 52.381 0.00 0.00 0.00 3.51
992 2052 0.622665 CCTGAACCCCATCTCTGCTT 59.377 55.000 0.00 0.00 0.00 3.91
994 2054 0.620556 TTCCTGAACCCCATCTCTGC 59.379 55.000 0.00 0.00 0.00 4.26
1206 2284 1.797025 CGGTGGAGAAGTTCTTGGTC 58.203 55.000 6.88 0.00 0.00 4.02
1386 2464 1.459592 CAACGAACTAGCCAACCGAAG 59.540 52.381 0.00 0.00 0.00 3.79
1388 2466 0.675083 TCAACGAACTAGCCAACCGA 59.325 50.000 0.00 0.00 0.00 4.69
1391 2469 5.049680 TCAAAGAATCAACGAACTAGCCAAC 60.050 40.000 0.00 0.00 0.00 3.77
1392 2470 5.060506 TCAAAGAATCAACGAACTAGCCAA 58.939 37.500 0.00 0.00 0.00 4.52
1393 2471 4.637276 TCAAAGAATCAACGAACTAGCCA 58.363 39.130 0.00 0.00 0.00 4.75
1394 2472 5.447818 CCATCAAAGAATCAACGAACTAGCC 60.448 44.000 0.00 0.00 0.00 3.93
1397 2475 6.316140 CCATCCATCAAAGAATCAACGAACTA 59.684 38.462 0.00 0.00 0.00 2.24
1398 2476 5.124457 CCATCCATCAAAGAATCAACGAACT 59.876 40.000 0.00 0.00 0.00 3.01
1399 2477 5.123820 TCCATCCATCAAAGAATCAACGAAC 59.876 40.000 0.00 0.00 0.00 3.95
1400 2478 5.252547 TCCATCCATCAAAGAATCAACGAA 58.747 37.500 0.00 0.00 0.00 3.85
1401 2479 4.842574 TCCATCCATCAAAGAATCAACGA 58.157 39.130 0.00 0.00 0.00 3.85
1403 2481 5.595542 TCCATCCATCCATCAAAGAATCAAC 59.404 40.000 0.00 0.00 0.00 3.18
1404 2482 5.768752 TCCATCCATCCATCAAAGAATCAA 58.231 37.500 0.00 0.00 0.00 2.57
1405 2483 5.391577 TCCATCCATCCATCAAAGAATCA 57.608 39.130 0.00 0.00 0.00 2.57
1406 2484 5.185249 CCATCCATCCATCCATCAAAGAATC 59.815 44.000 0.00 0.00 0.00 2.52
1407 2485 5.084519 CCATCCATCCATCCATCAAAGAAT 58.915 41.667 0.00 0.00 0.00 2.40
1411 2489 4.412843 CATCCATCCATCCATCCATCAAA 58.587 43.478 0.00 0.00 0.00 2.69
1412 2490 3.245479 CCATCCATCCATCCATCCATCAA 60.245 47.826 0.00 0.00 0.00 2.57
1413 2491 2.310647 CCATCCATCCATCCATCCATCA 59.689 50.000 0.00 0.00 0.00 3.07
1414 2492 2.949054 GCCATCCATCCATCCATCCATC 60.949 54.545 0.00 0.00 0.00 3.51
1415 2493 1.006758 GCCATCCATCCATCCATCCAT 59.993 52.381 0.00 0.00 0.00 3.41
1416 2494 0.406750 GCCATCCATCCATCCATCCA 59.593 55.000 0.00 0.00 0.00 3.41
1418 2496 1.353358 TCAGCCATCCATCCATCCATC 59.647 52.381 0.00 0.00 0.00 3.51
1419 2497 1.452540 TCAGCCATCCATCCATCCAT 58.547 50.000 0.00 0.00 0.00 3.41
1420 2498 1.452540 ATCAGCCATCCATCCATCCA 58.547 50.000 0.00 0.00 0.00 3.41
1421 2499 2.168496 CAATCAGCCATCCATCCATCC 58.832 52.381 0.00 0.00 0.00 3.51
1422 2500 2.168496 CCAATCAGCCATCCATCCATC 58.832 52.381 0.00 0.00 0.00 3.51
1424 2502 0.928505 ACCAATCAGCCATCCATCCA 59.071 50.000 0.00 0.00 0.00 3.41
1425 2503 2.077687 AACCAATCAGCCATCCATCC 57.922 50.000 0.00 0.00 0.00 3.51
1426 2504 4.476628 AAAAACCAATCAGCCATCCATC 57.523 40.909 0.00 0.00 0.00 3.51
1427 2505 5.163280 CCATAAAAACCAATCAGCCATCCAT 60.163 40.000 0.00 0.00 0.00 3.41
1428 2506 4.161942 CCATAAAAACCAATCAGCCATCCA 59.838 41.667 0.00 0.00 0.00 3.41
1429 2507 4.162131 ACCATAAAAACCAATCAGCCATCC 59.838 41.667 0.00 0.00 0.00 3.51
1431 2509 4.531732 ACACCATAAAAACCAATCAGCCAT 59.468 37.500 0.00 0.00 0.00 4.40
1433 2511 4.244862 CACACCATAAAAACCAATCAGCC 58.755 43.478 0.00 0.00 0.00 4.85
1435 2513 4.021192 AGCCACACCATAAAAACCAATCAG 60.021 41.667 0.00 0.00 0.00 2.90
1437 2515 4.244862 CAGCCACACCATAAAAACCAATC 58.755 43.478 0.00 0.00 0.00 2.67
1438 2516 3.007831 CCAGCCACACCATAAAAACCAAT 59.992 43.478 0.00 0.00 0.00 3.16
1441 2519 1.967779 ACCAGCCACACCATAAAAACC 59.032 47.619 0.00 0.00 0.00 3.27
1442 2520 2.351350 CGACCAGCCACACCATAAAAAC 60.351 50.000 0.00 0.00 0.00 2.43
1443 2521 1.883275 CGACCAGCCACACCATAAAAA 59.117 47.619 0.00 0.00 0.00 1.94
1446 2524 0.249120 CTCGACCAGCCACACCATAA 59.751 55.000 0.00 0.00 0.00 1.90
1448 2543 2.665000 CTCGACCAGCCACACCAT 59.335 61.111 0.00 0.00 0.00 3.55
1669 2791 2.164219 ACACGCCCAATCAATCAATCAC 59.836 45.455 0.00 0.00 0.00 3.06
1670 2792 2.164017 CACACGCCCAATCAATCAATCA 59.836 45.455 0.00 0.00 0.00 2.57
1671 2793 2.423185 TCACACGCCCAATCAATCAATC 59.577 45.455 0.00 0.00 0.00 2.67
1672 2794 2.445427 TCACACGCCCAATCAATCAAT 58.555 42.857 0.00 0.00 0.00 2.57
1673 2795 1.902938 TCACACGCCCAATCAATCAA 58.097 45.000 0.00 0.00 0.00 2.57
1850 2972 0.460987 GAGCGGGTGGATGAACAGAG 60.461 60.000 0.00 0.00 0.00 3.35
1851 2973 1.596934 GAGCGGGTGGATGAACAGA 59.403 57.895 0.00 0.00 0.00 3.41
1854 2976 0.876342 GATCGAGCGGGTGGATGAAC 60.876 60.000 9.45 0.00 0.00 3.18
1855 2977 1.441729 GATCGAGCGGGTGGATGAA 59.558 57.895 9.45 0.00 0.00 2.57
1859 2988 4.807631 TCGGATCGAGCGGGTGGA 62.808 66.667 8.44 0.00 0.00 4.02
1989 3730 9.903682 CATAACAAAATTCAGACAACTTGATCT 57.096 29.630 0.00 0.00 0.00 2.75
2107 3857 2.383527 CGAGCGTGTTGGCTTCTCC 61.384 63.158 0.00 0.00 44.93 3.71
2146 3896 1.377366 TTTTGTCGGGCGTTGCTGAA 61.377 50.000 0.00 0.00 0.00 3.02
2328 4179 3.057876 GCTGCTATGACTATGAGCGTACT 60.058 47.826 0.00 0.00 39.14 2.73
2335 4186 4.347360 AATGCAGCTGCTATGACTATGA 57.653 40.909 36.61 15.08 42.66 2.15
2340 4191 4.083431 CCTCAATAATGCAGCTGCTATGAC 60.083 45.833 36.61 10.03 42.66 3.06
2341 4192 4.070009 CCTCAATAATGCAGCTGCTATGA 58.930 43.478 36.61 27.74 42.66 2.15
2342 4193 3.819337 ACCTCAATAATGCAGCTGCTATG 59.181 43.478 36.61 25.62 42.66 2.23
2343 4194 4.070716 GACCTCAATAATGCAGCTGCTAT 58.929 43.478 36.61 26.86 42.66 2.97
2344 4195 3.470709 GACCTCAATAATGCAGCTGCTA 58.529 45.455 36.61 23.37 42.66 3.49
2351 4202 3.130869 GCACATTGGACCTCAATAATGCA 59.869 43.478 15.90 0.00 46.12 3.96
2402 4261 0.608308 TGATGGTGAGACCGAGACGT 60.608 55.000 0.00 0.00 42.58 4.34
2444 4335 9.573133 TGAACTTCTTTTTCTTGAACTCAATTC 57.427 29.630 0.00 0.00 35.02 2.17
2500 4392 3.185188 CGTAATCCTGCAAATCCAGATCG 59.815 47.826 0.00 0.00 34.77 3.69
3157 5060 0.596083 GCTCCGATCAGATCACACCG 60.596 60.000 11.12 0.00 0.00 4.94
3172 5075 1.917872 ATCCCTCGTCTCTATGCTCC 58.082 55.000 0.00 0.00 0.00 4.70
3231 5163 8.915057 AATGACATCAAAGAAGAAGAGAAAGA 57.085 30.769 0.00 0.00 0.00 2.52
3267 5207 7.014326 ACAAAATCTTCCACCCTAAAAGTTCTC 59.986 37.037 0.00 0.00 0.00 2.87
3322 5263 1.471119 CCGGACTACTCTTGGCAGTA 58.529 55.000 0.00 0.00 0.00 2.74
3363 5304 6.183360 CCTCAAACTTTCATAATACAGGCAGG 60.183 42.308 0.00 0.00 0.00 4.85
3364 5305 6.678900 GCCTCAAACTTTCATAATACAGGCAG 60.679 42.308 0.00 0.00 41.99 4.85
3365 5306 5.125417 GCCTCAAACTTTCATAATACAGGCA 59.875 40.000 0.00 0.00 41.99 4.75
3366 5307 5.125417 TGCCTCAAACTTTCATAATACAGGC 59.875 40.000 0.00 0.00 42.60 4.85
3442 5389 5.507077 ACGGCGTAATAGCATGTATTTTTG 58.493 37.500 12.58 0.00 39.27 2.44
3448 5395 2.861335 CACAACGGCGTAATAGCATGTA 59.139 45.455 15.20 0.00 39.27 2.29
3449 5396 1.663643 CACAACGGCGTAATAGCATGT 59.336 47.619 15.20 9.48 39.27 3.21
3453 5400 0.648958 GGTCACAACGGCGTAATAGC 59.351 55.000 15.20 5.47 0.00 2.97
3455 5402 1.999048 CAGGTCACAACGGCGTAATA 58.001 50.000 15.20 0.00 0.00 0.98
3460 5407 4.988598 AGGCAGGTCACAACGGCG 62.989 66.667 4.80 4.80 0.00 6.46
3461 5408 2.725203 TACAGGCAGGTCACAACGGC 62.725 60.000 0.00 0.00 0.00 5.68
3462 5409 0.036388 ATACAGGCAGGTCACAACGG 60.036 55.000 0.00 0.00 0.00 4.44
3463 5410 1.808411 AATACAGGCAGGTCACAACG 58.192 50.000 0.00 0.00 0.00 4.10
3464 5411 3.435671 GTGTAATACAGGCAGGTCACAAC 59.564 47.826 0.00 0.00 0.00 3.32
3465 5412 3.071747 TGTGTAATACAGGCAGGTCACAA 59.928 43.478 0.00 0.00 33.42 3.33
3466 5413 2.635427 TGTGTAATACAGGCAGGTCACA 59.365 45.455 0.00 0.00 33.42 3.58
3467 5414 3.328382 TGTGTAATACAGGCAGGTCAC 57.672 47.619 0.00 0.00 33.42 3.67
3468 5415 4.568072 AATGTGTAATACAGGCAGGTCA 57.432 40.909 0.00 0.00 43.80 4.02
3469 5416 4.700213 ACAAATGTGTAATACAGGCAGGTC 59.300 41.667 0.00 0.00 43.80 3.85
3470 5417 4.662278 ACAAATGTGTAATACAGGCAGGT 58.338 39.130 0.00 0.00 43.80 4.00
3471 5418 5.643379 AACAAATGTGTAATACAGGCAGG 57.357 39.130 0.00 0.00 43.80 4.85
3472 5419 6.551736 GGTAACAAATGTGTAATACAGGCAG 58.448 40.000 0.00 0.00 43.80 4.85
3493 5440 8.188799 CACATCTTACTTCTTCGTTCTATGGTA 58.811 37.037 0.00 0.00 0.00 3.25
3495 5442 6.019479 GCACATCTTACTTCTTCGTTCTATGG 60.019 42.308 0.00 0.00 0.00 2.74
3496 5443 6.754209 AGCACATCTTACTTCTTCGTTCTATG 59.246 38.462 0.00 0.00 0.00 2.23
3497 5444 6.868622 AGCACATCTTACTTCTTCGTTCTAT 58.131 36.000 0.00 0.00 0.00 1.98
3500 5447 5.405571 TGAAGCACATCTTACTTCTTCGTTC 59.594 40.000 0.00 0.00 40.36 3.95
3501 5448 5.297547 TGAAGCACATCTTACTTCTTCGTT 58.702 37.500 0.00 0.00 40.36 3.85
3516 5463 6.876789 TCTTCTTAATTAACGGATGAAGCACA 59.123 34.615 14.71 1.91 32.19 4.57
3517 5464 7.303634 TCTTCTTAATTAACGGATGAAGCAC 57.696 36.000 14.71 0.00 32.19 4.40
3519 5466 8.665685 TCTTTCTTCTTAATTAACGGATGAAGC 58.334 33.333 14.71 0.00 32.19 3.86
3522 5469 9.938280 TCTTCTTTCTTCTTAATTAACGGATGA 57.062 29.630 0.00 0.00 0.00 2.92
3524 5471 9.945904 ACTCTTCTTTCTTCTTAATTAACGGAT 57.054 29.630 0.00 0.00 0.00 4.18
3542 5499 6.357367 ACCTGACATTTGTAACACTCTTCTT 58.643 36.000 0.00 0.00 0.00 2.52
3544 5501 6.619801 AACCTGACATTTGTAACACTCTTC 57.380 37.500 0.00 0.00 0.00 2.87
3564 5521 9.093970 GCCCTAAATGAATTTTGTAACATAACC 57.906 33.333 0.00 0.00 0.00 2.85
3565 5522 9.646427 TGCCCTAAATGAATTTTGTAACATAAC 57.354 29.630 0.00 0.00 0.00 1.89
3579 5536 1.409521 CGTGGGGATGCCCTAAATGAA 60.410 52.381 24.41 0.00 44.66 2.57
3582 5539 1.152756 GCGTGGGGATGCCCTAAAT 60.153 57.895 24.41 0.00 44.66 1.40
3594 5551 4.323477 TTTGAGGGTCGGCGTGGG 62.323 66.667 6.85 0.00 0.00 4.61
3595 5552 3.047877 GTTTGAGGGTCGGCGTGG 61.048 66.667 6.85 0.00 0.00 4.94
3596 5553 3.047877 GGTTTGAGGGTCGGCGTG 61.048 66.667 6.85 0.00 0.00 5.34
3597 5554 4.675029 CGGTTTGAGGGTCGGCGT 62.675 66.667 6.85 0.00 0.00 5.68
3598 5555 4.675029 ACGGTTTGAGGGTCGGCG 62.675 66.667 0.00 0.00 0.00 6.46
3599 5556 1.895231 AAACGGTTTGAGGGTCGGC 60.895 57.895 5.12 0.00 0.00 5.54
3600 5557 0.816421 ACAAACGGTTTGAGGGTCGG 60.816 55.000 33.41 10.49 43.26 4.79
3601 5558 0.306533 CACAAACGGTTTGAGGGTCG 59.693 55.000 33.41 11.15 43.26 4.79
3602 5559 1.332686 GTCACAAACGGTTTGAGGGTC 59.667 52.381 33.41 18.18 43.26 4.46
3603 5560 1.340211 TGTCACAAACGGTTTGAGGGT 60.340 47.619 33.41 13.47 43.26 4.34
3604 5561 1.333619 CTGTCACAAACGGTTTGAGGG 59.666 52.381 33.41 22.69 43.26 4.30
3605 5562 2.014128 ACTGTCACAAACGGTTTGAGG 58.986 47.619 33.41 24.69 45.54 3.86
3612 5569 1.068417 TCCGGACTGTCACAAACGG 59.932 57.895 13.90 13.90 42.45 4.44
3613 5570 1.219522 GGTCCGGACTGTCACAAACG 61.220 60.000 32.52 3.40 0.00 3.60
3614 5571 1.219522 CGGTCCGGACTGTCACAAAC 61.220 60.000 31.69 12.77 33.13 2.93
3615 5572 1.068417 CGGTCCGGACTGTCACAAA 59.932 57.895 31.69 0.00 33.13 2.83
3616 5573 2.732016 CGGTCCGGACTGTCACAA 59.268 61.111 31.69 0.00 33.13 3.33
3617 5574 3.986006 GCGGTCCGGACTGTCACA 61.986 66.667 37.28 0.00 39.81 3.58
3635 5592 2.968697 AAAACACGTCCGGACCGC 60.969 61.111 28.52 4.56 0.00 5.68
3636 5593 2.932905 CAAAACACGTCCGGACCG 59.067 61.111 28.52 23.77 0.00 4.79
3637 5594 1.716826 TTGCAAAACACGTCCGGACC 61.717 55.000 28.52 12.33 0.00 4.46
3638 5595 0.309612 ATTGCAAAACACGTCCGGAC 59.690 50.000 25.28 25.28 0.00 4.79
3639 5596 1.002251 GAATTGCAAAACACGTCCGGA 60.002 47.619 1.71 0.00 0.00 5.14
3640 5597 1.268794 TGAATTGCAAAACACGTCCGG 60.269 47.619 1.71 0.00 0.00 5.14
3641 5598 2.112475 TGAATTGCAAAACACGTCCG 57.888 45.000 1.71 0.00 0.00 4.79
3642 5599 3.000177 GTGTTGAATTGCAAAACACGTCC 60.000 43.478 22.86 7.24 43.04 4.79
3643 5600 4.163475 GTGTTGAATTGCAAAACACGTC 57.837 40.909 22.86 7.53 43.04 4.34
3646 5603 2.926838 ACCGTGTTGAATTGCAAAACAC 59.073 40.909 25.50 25.50 43.60 3.32
3647 5604 3.182967 GACCGTGTTGAATTGCAAAACA 58.817 40.909 10.41 10.41 43.60 2.83
3648 5605 2.538037 GGACCGTGTTGAATTGCAAAAC 59.462 45.455 1.71 4.20 40.64 2.43
3649 5606 2.428890 AGGACCGTGTTGAATTGCAAAA 59.571 40.909 1.71 0.00 38.44 2.44
3650 5607 2.028130 AGGACCGTGTTGAATTGCAAA 58.972 42.857 1.71 0.00 38.44 3.68
3651 5608 1.336440 CAGGACCGTGTTGAATTGCAA 59.664 47.619 0.00 0.00 0.00 4.08
3652 5609 0.950836 CAGGACCGTGTTGAATTGCA 59.049 50.000 0.00 0.00 0.00 4.08
3653 5610 0.951558 ACAGGACCGTGTTGAATTGC 59.048 50.000 0.00 0.00 0.00 3.56
3654 5611 3.062099 CGATACAGGACCGTGTTGAATTG 59.938 47.826 0.54 0.00 31.46 2.32
3655 5612 3.259064 CGATACAGGACCGTGTTGAATT 58.741 45.455 0.54 0.00 31.46 2.17
3656 5613 2.418197 CCGATACAGGACCGTGTTGAAT 60.418 50.000 0.54 0.00 31.46 2.57
3657 5614 1.067425 CCGATACAGGACCGTGTTGAA 60.067 52.381 0.54 0.00 31.46 2.69
3658 5615 0.528924 CCGATACAGGACCGTGTTGA 59.471 55.000 0.54 0.00 31.46 3.18
3659 5616 0.245539 ACCGATACAGGACCGTGTTG 59.754 55.000 0.54 0.00 34.73 3.33
3660 5617 0.971386 AACCGATACAGGACCGTGTT 59.029 50.000 0.54 0.00 34.73 3.32
3661 5618 0.529378 GAACCGATACAGGACCGTGT 59.471 55.000 0.96 0.96 34.73 4.49
3662 5619 0.524816 CGAACCGATACAGGACCGTG 60.525 60.000 0.00 0.00 34.73 4.94
3663 5620 0.962356 ACGAACCGATACAGGACCGT 60.962 55.000 0.00 0.00 37.74 4.83
3664 5621 0.248377 GACGAACCGATACAGGACCG 60.248 60.000 0.00 0.00 36.39 4.79
3665 5622 0.813184 TGACGAACCGATACAGGACC 59.187 55.000 0.00 0.00 34.73 4.46
3666 5623 2.257034 GTTGACGAACCGATACAGGAC 58.743 52.381 0.00 0.00 34.73 3.85
3667 5624 1.203052 GGTTGACGAACCGATACAGGA 59.797 52.381 0.00 0.00 42.47 3.86
3668 5625 1.636988 GGTTGACGAACCGATACAGG 58.363 55.000 0.00 0.00 42.47 4.00
3681 5638 3.314541 AATACGTCCAGTCTGGTTGAC 57.685 47.619 18.65 8.79 45.67 3.18
3682 5639 4.345859 AAAATACGTCCAGTCTGGTTGA 57.654 40.909 18.65 3.65 39.03 3.18
3683 5640 4.083484 GGAAAAATACGTCCAGTCTGGTTG 60.083 45.833 18.65 13.98 39.03 3.77
3684 5641 4.070009 GGAAAAATACGTCCAGTCTGGTT 58.930 43.478 18.65 7.14 39.03 3.67
3685 5642 3.558533 GGGAAAAATACGTCCAGTCTGGT 60.559 47.826 18.65 2.16 39.03 4.00
3686 5643 3.007635 GGGAAAAATACGTCCAGTCTGG 58.992 50.000 13.21 13.21 39.43 3.86
3687 5644 2.671396 CGGGAAAAATACGTCCAGTCTG 59.329 50.000 0.00 0.00 35.44 3.51
3688 5645 2.933928 GCGGGAAAAATACGTCCAGTCT 60.934 50.000 0.00 0.00 35.44 3.24
3689 5646 1.395954 GCGGGAAAAATACGTCCAGTC 59.604 52.381 0.00 0.00 35.44 3.51
3690 5647 1.270947 TGCGGGAAAAATACGTCCAGT 60.271 47.619 0.00 0.00 35.44 4.00
3691 5648 1.444836 TGCGGGAAAAATACGTCCAG 58.555 50.000 0.00 0.00 35.44 3.86
3692 5649 3.627645 TGCGGGAAAAATACGTCCA 57.372 47.368 0.00 0.00 35.44 4.02
3996 5953 1.605451 GGGGGAGGGTTTTTGGTCG 60.605 63.158 0.00 0.00 0.00 4.79
3997 5954 0.251653 GAGGGGGAGGGTTTTTGGTC 60.252 60.000 0.00 0.00 0.00 4.02
3998 5955 1.858505 GAGGGGGAGGGTTTTTGGT 59.141 57.895 0.00 0.00 0.00 3.67
3999 5956 1.304134 CGAGGGGGAGGGTTTTTGG 60.304 63.158 0.00 0.00 0.00 3.28
4000 5957 0.608308 GACGAGGGGGAGGGTTTTTG 60.608 60.000 0.00 0.00 0.00 2.44
4001 5958 1.765727 GACGAGGGGGAGGGTTTTT 59.234 57.895 0.00 0.00 0.00 1.94
4002 5959 2.229203 GGACGAGGGGGAGGGTTTT 61.229 63.158 0.00 0.00 0.00 2.43
4003 5960 2.609921 GGACGAGGGGGAGGGTTT 60.610 66.667 0.00 0.00 0.00 3.27
4022 5979 2.668212 TTCAGGTGGGAAAGCGCG 60.668 61.111 0.00 0.00 0.00 6.86
4023 5980 2.982744 GCTTCAGGTGGGAAAGCGC 61.983 63.158 0.00 0.00 0.00 5.92
4024 5981 2.335712 GGCTTCAGGTGGGAAAGCG 61.336 63.158 0.00 0.00 0.00 4.68
4025 5982 1.228552 TGGCTTCAGGTGGGAAAGC 60.229 57.895 0.00 0.00 0.00 3.51
4026 5983 1.246737 GCTGGCTTCAGGTGGGAAAG 61.247 60.000 0.00 0.00 38.87 2.62
4027 5984 1.228552 GCTGGCTTCAGGTGGGAAA 60.229 57.895 0.00 0.00 38.87 3.13
4028 5985 2.156098 AGCTGGCTTCAGGTGGGAA 61.156 57.895 0.00 0.00 46.21 3.97
4029 5986 2.530151 AGCTGGCTTCAGGTGGGA 60.530 61.111 0.00 0.00 46.21 4.37
4034 5991 4.355720 TGGGCAGCTGGCTTCAGG 62.356 66.667 35.64 0.00 44.01 3.86
4035 5992 3.060615 GTGGGCAGCTGGCTTCAG 61.061 66.667 35.64 0.00 44.01 3.02
4036 5993 2.718487 AATGTGGGCAGCTGGCTTCA 62.718 55.000 35.64 31.19 44.01 3.02
4037 5994 1.941999 GAATGTGGGCAGCTGGCTTC 61.942 60.000 35.64 26.96 44.01 3.86
4038 5995 1.980772 GAATGTGGGCAGCTGGCTT 60.981 57.895 35.64 23.81 44.01 4.35
4039 5996 2.362120 GAATGTGGGCAGCTGGCT 60.362 61.111 35.64 18.91 44.01 4.75
4040 5997 1.610554 AATGAATGTGGGCAGCTGGC 61.611 55.000 30.97 30.97 43.74 4.85
4041 5998 0.458669 GAATGAATGTGGGCAGCTGG 59.541 55.000 17.12 0.00 0.00 4.85
4042 5999 1.179152 TGAATGAATGTGGGCAGCTG 58.821 50.000 10.11 10.11 0.00 4.24
4043 6000 1.754803 CATGAATGAATGTGGGCAGCT 59.245 47.619 0.00 0.00 0.00 4.24
4044 6001 1.479323 ACATGAATGAATGTGGGCAGC 59.521 47.619 0.00 0.00 39.32 5.25
4045 6002 2.223409 CGACATGAATGAATGTGGGCAG 60.223 50.000 0.00 0.00 40.87 4.85
4046 6003 1.744522 CGACATGAATGAATGTGGGCA 59.255 47.619 0.00 0.00 40.87 5.36
4047 6004 1.534595 GCGACATGAATGAATGTGGGC 60.535 52.381 0.00 0.00 40.87 5.36
4048 6005 2.019249 AGCGACATGAATGAATGTGGG 58.981 47.619 0.00 0.00 40.87 4.61
4049 6006 2.941064 AGAGCGACATGAATGAATGTGG 59.059 45.455 0.00 0.00 40.87 4.17
4050 6007 5.045872 TCTAGAGCGACATGAATGAATGTG 58.954 41.667 0.00 0.00 40.87 3.21
4051 6008 5.268118 TCTAGAGCGACATGAATGAATGT 57.732 39.130 0.00 0.00 43.47 2.71
4052 6009 4.150274 GCTCTAGAGCGACATGAATGAATG 59.850 45.833 28.04 0.00 45.29 2.67
4053 6010 4.305769 GCTCTAGAGCGACATGAATGAAT 58.694 43.478 28.04 0.00 45.29 2.57
4054 6011 3.711086 GCTCTAGAGCGACATGAATGAA 58.289 45.455 28.04 0.00 45.29 2.57
4055 6012 3.361794 GCTCTAGAGCGACATGAATGA 57.638 47.619 28.04 0.00 45.29 2.57
4084 6041 3.326889 CTGGGCCGTTGTCAATGCG 62.327 63.158 0.00 0.00 0.00 4.73
4085 6042 2.268076 ACTGGGCCGTTGTCAATGC 61.268 57.895 0.00 0.74 0.00 3.56
4086 6043 1.172180 ACACTGGGCCGTTGTCAATG 61.172 55.000 4.06 0.00 0.00 2.82
4087 6044 1.150536 ACACTGGGCCGTTGTCAAT 59.849 52.632 4.06 0.00 0.00 2.57
4088 6045 1.821759 CACACTGGGCCGTTGTCAA 60.822 57.895 6.85 0.00 0.00 3.18
4089 6046 2.203139 CACACTGGGCCGTTGTCA 60.203 61.111 6.85 0.00 0.00 3.58
4090 6047 2.978010 CCACACTGGGCCGTTGTC 60.978 66.667 6.85 0.00 32.67 3.18
4091 6048 3.484806 TCCACACTGGGCCGTTGT 61.485 61.111 4.06 4.06 38.32 3.32
4092 6049 2.978010 GTCCACACTGGGCCGTTG 60.978 66.667 0.00 0.00 35.72 4.10
4093 6050 3.484806 TGTCCACACTGGGCCGTT 61.485 61.111 0.00 0.00 42.76 4.44
4094 6051 4.250305 GTGTCCACACTGGGCCGT 62.250 66.667 0.00 0.00 42.76 5.68
4096 6053 3.936203 TCGTGTCCACACTGGGCC 61.936 66.667 8.19 0.00 42.76 5.80
4097 6054 2.665185 GTCGTGTCCACACTGGGC 60.665 66.667 8.19 0.00 43.98 5.36
4098 6055 2.030562 GGTCGTGTCCACACTGGG 59.969 66.667 8.19 0.00 44.34 4.45
4099 6056 1.006102 GAGGTCGTGTCCACACTGG 60.006 63.158 8.19 0.00 44.34 4.00
4100 6057 0.039074 GAGAGGTCGTGTCCACACTG 60.039 60.000 8.19 2.48 44.34 3.66
4101 6058 0.467474 TGAGAGGTCGTGTCCACACT 60.467 55.000 8.19 0.00 44.34 3.55
4102 6059 0.318784 GTGAGAGGTCGTGTCCACAC 60.319 60.000 0.00 0.00 43.15 3.82
4103 6060 0.467474 AGTGAGAGGTCGTGTCCACA 60.467 55.000 0.00 0.00 0.00 4.17
4104 6061 1.469308 CTAGTGAGAGGTCGTGTCCAC 59.531 57.143 0.00 0.00 0.00 4.02
4105 6062 1.822506 CTAGTGAGAGGTCGTGTCCA 58.177 55.000 0.00 0.00 0.00 4.02
4106 6063 0.452585 GCTAGTGAGAGGTCGTGTCC 59.547 60.000 0.00 0.00 0.00 4.02
4107 6064 0.097325 CGCTAGTGAGAGGTCGTGTC 59.903 60.000 0.00 0.00 0.00 3.67
4108 6065 0.605860 ACGCTAGTGAGAGGTCGTGT 60.606 55.000 10.99 0.00 0.00 4.49
4109 6066 0.097325 GACGCTAGTGAGAGGTCGTG 59.903 60.000 10.99 0.00 0.00 4.35
4110 6067 1.360194 CGACGCTAGTGAGAGGTCGT 61.360 60.000 10.99 0.00 41.96 4.34
4111 6068 1.348938 CGACGCTAGTGAGAGGTCG 59.651 63.158 10.99 4.55 41.53 4.79
4112 6069 1.722677 CCGACGCTAGTGAGAGGTC 59.277 63.158 10.99 0.00 0.00 3.85
4113 6070 2.408241 GCCGACGCTAGTGAGAGGT 61.408 63.158 10.99 0.00 0.00 3.85
4114 6071 1.729470 ATGCCGACGCTAGTGAGAGG 61.729 60.000 10.99 10.70 35.36 3.69
4115 6072 0.101399 AATGCCGACGCTAGTGAGAG 59.899 55.000 10.99 0.54 35.36 3.20
4116 6073 0.179137 CAATGCCGACGCTAGTGAGA 60.179 55.000 10.99 0.00 35.36 3.27
4117 6074 0.179137 TCAATGCCGACGCTAGTGAG 60.179 55.000 10.99 3.48 35.36 3.51
4118 6075 0.457853 GTCAATGCCGACGCTAGTGA 60.458 55.000 10.99 0.00 35.36 3.41
4119 6076 1.999051 GTCAATGCCGACGCTAGTG 59.001 57.895 0.59 0.59 35.36 2.74
4120 6077 4.496670 GTCAATGCCGACGCTAGT 57.503 55.556 0.00 0.00 35.36 2.57
4129 6086 4.166011 GTGAGCCGCGTCAATGCC 62.166 66.667 4.92 0.00 0.00 4.40
4130 6087 4.166011 GGTGAGCCGCGTCAATGC 62.166 66.667 4.92 0.00 0.00 3.56
4140 6097 2.022129 CACACTCGAACGGTGAGCC 61.022 63.158 9.98 0.00 36.94 4.70
4141 6098 2.658707 GCACACTCGAACGGTGAGC 61.659 63.158 9.98 9.61 41.96 4.26
4142 6099 1.278172 CTGCACACTCGAACGGTGAG 61.278 60.000 9.98 3.69 38.01 3.51
4143 6100 1.299850 CTGCACACTCGAACGGTGA 60.300 57.895 9.98 0.00 38.01 4.02
4144 6101 2.943345 GCTGCACACTCGAACGGTG 61.943 63.158 2.01 2.01 40.19 4.94
4145 6102 2.661866 GCTGCACACTCGAACGGT 60.662 61.111 0.00 0.00 0.00 4.83
4146 6103 3.414700 GGCTGCACACTCGAACGG 61.415 66.667 0.50 0.00 0.00 4.44
4147 6104 3.414700 GGGCTGCACACTCGAACG 61.415 66.667 0.50 0.00 0.00 3.95
4148 6105 2.280797 TGGGCTGCACACTCGAAC 60.281 61.111 0.00 0.00 0.00 3.95
4149 6106 2.280797 GTGGGCTGCACACTCGAA 60.281 61.111 26.87 0.00 35.98 3.71
4150 6107 4.662961 CGTGGGCTGCACACTCGA 62.663 66.667 30.04 0.00 36.71 4.04


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.