Multiple sequence alignment - TraesCS7D01G160300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G160300 chr7D 100.000 5491 0 0 1 5491 110578301 110583791 0.000000e+00 10141.0
1 TraesCS7D01G160300 chr7D 91.531 307 21 4 5186 5491 123202153 123201851 8.510000e-113 418.0
2 TraesCS7D01G160300 chr7D 92.308 39 2 1 449 486 219833954 219833992 3.000000e-03 54.7
3 TraesCS7D01G160300 chr7A 91.317 2810 182 39 482 3269 115807475 115804706 0.000000e+00 3781.0
4 TraesCS7D01G160300 chr7A 91.980 985 64 11 3398 4378 115804500 115803527 0.000000e+00 1367.0
5 TraesCS7D01G160300 chr7A 92.023 514 16 13 4367 4877 115803502 115803011 0.000000e+00 699.0
6 TraesCS7D01G160300 chr7A 86.892 473 48 7 3738 4206 115840325 115840787 8.150000e-143 518.0
7 TraesCS7D01G160300 chr7A 96.591 264 2 4 4368 4625 115842085 115842347 1.090000e-116 431.0
8 TraesCS7D01G160300 chr7A 95.597 159 7 0 3237 3395 115804703 115804545 7.060000e-64 255.0
9 TraesCS7D01G160300 chr7A 83.007 306 21 15 4914 5189 115803015 115802711 1.180000e-61 248.0
10 TraesCS7D01G160300 chr7B 90.814 2112 134 30 634 2709 69658313 69660400 0.000000e+00 2771.0
11 TraesCS7D01G160300 chr7B 90.200 1602 80 26 3477 5007 69662100 69663695 0.000000e+00 2017.0
12 TraesCS7D01G160300 chr7B 90.208 480 37 4 2714 3191 69660989 69661460 7.810000e-173 617.0
13 TraesCS7D01G160300 chr7B 87.104 473 48 7 3738 4206 69748512 69748975 1.750000e-144 523.0
14 TraesCS7D01G160300 chr7B 95.597 159 7 0 3237 3395 69661856 69662014 7.060000e-64 255.0
15 TraesCS7D01G160300 chr7B 80.866 277 47 4 2 277 69657771 69658042 4.310000e-51 213.0
16 TraesCS7D01G160300 chr4D 96.040 303 12 0 5189 5491 450326611 450326913 1.370000e-135 494.0
17 TraesCS7D01G160300 chr6D 95.380 303 14 0 5189 5491 462475222 462475524 2.970000e-132 483.0
18 TraesCS7D01G160300 chr3A 94.371 302 16 1 5190 5491 65741588 65741288 3.870000e-126 462.0
19 TraesCS7D01G160300 chr3A 90.132 304 30 0 5188 5491 434821828 434821525 3.990000e-106 396.0
20 TraesCS7D01G160300 chr3A 100.000 28 0 0 458 485 16928648 16928621 1.000000e-02 52.8
21 TraesCS7D01G160300 chr4A 93.750 304 19 0 5188 5491 732862968 732863271 1.800000e-124 457.0
22 TraesCS7D01G160300 chr5D 90.196 306 27 3 5187 5491 189162252 189162555 3.990000e-106 396.0
23 TraesCS7D01G160300 chr5B 89.180 305 28 2 5187 5491 526116375 526116076 5.190000e-100 375.0
24 TraesCS7D01G160300 chr2D 88.673 309 32 3 5184 5491 627037533 627037227 1.870000e-99 374.0
25 TraesCS7D01G160300 chr2D 90.909 55 4 1 4156 4210 398307183 398307130 7.630000e-09 73.1
26 TraesCS7D01G160300 chr2D 96.875 32 1 0 457 488 99733170 99733139 3.000000e-03 54.7
27 TraesCS7D01G160300 chr1B 82.890 263 23 16 812 1055 199479103 199479362 3.330000e-52 217.0
28 TraesCS7D01G160300 chr1B 90.000 60 5 1 4157 4216 473827136 473827078 5.900000e-10 76.8
29 TraesCS7D01G160300 chr1B 93.023 43 1 1 458 498 542688093 542688135 1.650000e-05 62.1
30 TraesCS7D01G160300 chrUn 100.000 32 0 0 452 483 49212477 49212446 5.940000e-05 60.2
31 TraesCS7D01G160300 chrUn 100.000 32 0 0 452 483 273542869 273542838 5.940000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G160300 chr7D 110578301 110583791 5490 False 10141.0 10141 100.0000 1 5491 1 chr7D.!!$F1 5490
1 TraesCS7D01G160300 chr7A 115802711 115807475 4764 True 1270.0 3781 90.7848 482 5189 5 chr7A.!!$R1 4707
2 TraesCS7D01G160300 chr7A 115840325 115842347 2022 False 474.5 518 91.7415 3738 4625 2 chr7A.!!$F1 887
3 TraesCS7D01G160300 chr7B 69657771 69663695 5924 False 1174.6 2771 89.5370 2 5007 5 chr7B.!!$F2 5005

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
429 432 0.042131 ACTCCCTCCGTCCCATAACA 59.958 55.000 0.0 0.0 0.00 2.41 F
431 434 0.252330 TCCCTCCGTCCCATAACACA 60.252 55.000 0.0 0.0 0.00 3.72 F
432 435 0.616371 CCCTCCGTCCCATAACACAA 59.384 55.000 0.0 0.0 0.00 3.33 F
1878 1914 0.984230 TTCCACCCTGAAGTAGGCAG 59.016 55.000 0.0 0.0 45.89 4.85 F
2197 2235 1.490490 TGTGATTCCCAGTAGCCATCC 59.510 52.381 0.0 0.0 0.00 3.51 F
3115 3758 0.676782 ACTTTGGTAGCATCGGTGGC 60.677 55.000 0.0 0.0 0.00 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1304 1336 1.001520 TCGTCGATTTCAGGAAAGCCA 59.998 47.619 4.61 0.0 33.51 4.75 R
1858 1894 1.351017 CTGCCTACTTCAGGGTGGAAA 59.649 52.381 0.00 0.0 45.66 3.13 R
2408 2456 1.730902 CTCGACAGTGGTCAGCGTG 60.731 63.158 0.00 0.0 44.54 5.34 R
2908 3550 0.034670 GGCCTTCATCTTGCTCACCT 60.035 55.000 0.00 0.0 0.00 4.00 R
3197 3840 0.324552 CCATCCCAACCCATCTTGCA 60.325 55.000 0.00 0.0 0.00 4.08 R
4650 6838 0.392327 CCGTACCATGCACCATGTGA 60.392 55.000 0.00 0.0 39.94 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.216411 GGCCCAGACAGTCAAAGTTATA 57.784 45.455 2.66 0.00 0.00 0.98
25 26 6.183360 GGCCCAGACAGTCAAAGTTATATAGA 60.183 42.308 2.66 0.00 0.00 1.98
37 38 9.011095 TCAAAGTTATATAGACAGAGGATACGG 57.989 37.037 0.00 0.00 46.39 4.02
42 43 8.614346 GTTATATAGACAGAGGATACGGCTTAG 58.386 40.741 0.00 0.00 46.39 2.18
54 55 3.906720 ACGGCTTAGAACACACCATAT 57.093 42.857 0.00 0.00 0.00 1.78
56 57 4.189231 ACGGCTTAGAACACACCATATTC 58.811 43.478 0.00 0.00 0.00 1.75
61 62 5.050972 GCTTAGAACACACCATATTCGTAGC 60.051 44.000 0.00 0.00 31.42 3.58
65 66 2.689471 ACACACCATATTCGTAGCCGTA 59.311 45.455 0.00 0.00 35.01 4.02
68 69 3.825014 ACACCATATTCGTAGCCGTAGAT 59.175 43.478 0.00 0.00 35.01 1.98
69 70 4.280174 ACACCATATTCGTAGCCGTAGATT 59.720 41.667 0.00 0.00 35.01 2.40
78 79 1.890876 AGCCGTAGATTGCAACAACA 58.109 45.000 0.00 0.00 0.00 3.33
81 82 3.623060 AGCCGTAGATTGCAACAACATAG 59.377 43.478 0.00 0.00 0.00 2.23
83 84 4.494199 GCCGTAGATTGCAACAACATAGAC 60.494 45.833 0.00 0.00 0.00 2.59
90 91 8.340618 AGATTGCAACAACATAGACTTGTAAT 57.659 30.769 0.00 0.00 33.35 1.89
105 106 7.833786 AGACTTGTAATATCAACAGAACCGTA 58.166 34.615 0.00 0.00 0.00 4.02
110 111 6.748658 TGTAATATCAACAGAACCGTAGAACG 59.251 38.462 0.00 0.00 42.11 3.95
115 116 3.555917 ACAGAACCGTAGAACGAGAAG 57.444 47.619 0.15 0.00 46.05 2.85
119 120 3.946558 AGAACCGTAGAACGAGAAGCTAT 59.053 43.478 0.15 0.00 46.05 2.97
140 141 5.552870 ATTTGTAAGCTATCATCGACCCT 57.447 39.130 0.00 0.00 0.00 4.34
143 144 1.794714 AAGCTATCATCGACCCTGGT 58.205 50.000 0.00 0.00 0.00 4.00
153 154 4.881273 TCATCGACCCTGGTGAAAAATATG 59.119 41.667 0.00 0.00 0.00 1.78
154 155 3.616219 TCGACCCTGGTGAAAAATATGG 58.384 45.455 0.00 0.00 0.00 2.74
157 158 4.600062 GACCCTGGTGAAAAATATGGTCT 58.400 43.478 0.00 0.00 38.36 3.85
158 159 5.628200 CGACCCTGGTGAAAAATATGGTCTA 60.628 44.000 0.00 0.00 39.05 2.59
159 160 6.147437 ACCCTGGTGAAAAATATGGTCTAA 57.853 37.500 0.00 0.00 0.00 2.10
184 185 4.625607 ATCTAAATAGCTGGCCCACTAC 57.374 45.455 0.00 0.00 0.00 2.73
191 192 3.330126 AGCTGGCCCACTACTAGATTA 57.670 47.619 0.00 0.00 0.00 1.75
200 202 5.765182 GCCCACTACTAGATTATTTGCACAT 59.235 40.000 0.00 0.00 0.00 3.21
201 203 6.293626 GCCCACTACTAGATTATTTGCACATG 60.294 42.308 0.00 0.00 0.00 3.21
202 204 6.205464 CCCACTACTAGATTATTTGCACATGG 59.795 42.308 0.00 0.00 0.00 3.66
229 231 5.762045 CTTTCATGTCACCTTAGTTGTTGG 58.238 41.667 0.00 0.00 0.00 3.77
234 236 3.139077 GTCACCTTAGTTGTTGGGAGTG 58.861 50.000 0.00 0.00 0.00 3.51
235 237 1.880027 CACCTTAGTTGTTGGGAGTGC 59.120 52.381 0.00 0.00 0.00 4.40
273 275 2.300433 GGCATCAACCAGTCATGCATA 58.700 47.619 0.00 0.00 44.04 3.14
277 279 4.516321 GCATCAACCAGTCATGCATATACA 59.484 41.667 0.00 0.00 42.18 2.29
278 280 5.182570 GCATCAACCAGTCATGCATATACAT 59.817 40.000 0.00 0.00 42.18 2.29
279 281 6.622245 GCATCAACCAGTCATGCATATACATC 60.622 42.308 0.00 0.00 42.18 3.06
283 285 8.210265 TCAACCAGTCATGCATATACATCTAAA 58.790 33.333 0.00 0.00 0.00 1.85
284 286 8.839343 CAACCAGTCATGCATATACATCTAAAA 58.161 33.333 0.00 0.00 0.00 1.52
285 287 8.613060 ACCAGTCATGCATATACATCTAAAAG 57.387 34.615 0.00 0.00 0.00 2.27
286 288 8.432013 ACCAGTCATGCATATACATCTAAAAGA 58.568 33.333 0.00 0.00 0.00 2.52
307 309 9.945904 AAAAGATCTTACTTAGTTTACAGAGGG 57.054 33.333 8.75 0.00 0.00 4.30
308 310 8.896722 AAGATCTTACTTAGTTTACAGAGGGA 57.103 34.615 6.06 0.00 0.00 4.20
309 311 8.896722 AGATCTTACTTAGTTTACAGAGGGAA 57.103 34.615 0.00 0.00 0.00 3.97
310 312 8.751242 AGATCTTACTTAGTTTACAGAGGGAAC 58.249 37.037 0.00 0.00 0.00 3.62
311 313 7.844493 TCTTACTTAGTTTACAGAGGGAACA 57.156 36.000 0.00 0.00 0.00 3.18
312 314 8.431910 TCTTACTTAGTTTACAGAGGGAACAT 57.568 34.615 0.00 0.00 0.00 2.71
313 315 8.529476 TCTTACTTAGTTTACAGAGGGAACATC 58.471 37.037 0.00 0.00 0.00 3.06
314 316 6.936968 ACTTAGTTTACAGAGGGAACATCT 57.063 37.500 0.00 0.00 0.00 2.90
315 317 7.317722 ACTTAGTTTACAGAGGGAACATCTT 57.682 36.000 0.00 0.00 0.00 2.40
316 318 7.746703 ACTTAGTTTACAGAGGGAACATCTTT 58.253 34.615 0.00 0.00 0.00 2.52
317 319 8.218488 ACTTAGTTTACAGAGGGAACATCTTTT 58.782 33.333 0.00 0.00 0.00 2.27
318 320 6.884280 AGTTTACAGAGGGAACATCTTTTG 57.116 37.500 0.00 0.00 0.00 2.44
319 321 5.241728 AGTTTACAGAGGGAACATCTTTTGC 59.758 40.000 0.00 0.00 0.00 3.68
320 322 3.228188 ACAGAGGGAACATCTTTTGCA 57.772 42.857 0.00 0.00 0.00 4.08
321 323 3.771216 ACAGAGGGAACATCTTTTGCAT 58.229 40.909 0.00 0.00 0.00 3.96
322 324 4.154942 ACAGAGGGAACATCTTTTGCATT 58.845 39.130 0.00 0.00 0.00 3.56
323 325 5.324409 ACAGAGGGAACATCTTTTGCATTA 58.676 37.500 0.00 0.00 0.00 1.90
324 326 5.774690 ACAGAGGGAACATCTTTTGCATTAA 59.225 36.000 0.00 0.00 0.00 1.40
325 327 6.438425 ACAGAGGGAACATCTTTTGCATTAAT 59.562 34.615 0.00 0.00 0.00 1.40
326 328 7.615365 ACAGAGGGAACATCTTTTGCATTAATA 59.385 33.333 0.00 0.00 0.00 0.98
327 329 8.636213 CAGAGGGAACATCTTTTGCATTAATAT 58.364 33.333 0.00 0.00 0.00 1.28
328 330 9.866655 AGAGGGAACATCTTTTGCATTAATATA 57.133 29.630 0.00 0.00 0.00 0.86
331 333 9.860898 GGGAACATCTTTTGCATTAATATATCC 57.139 33.333 0.00 0.00 0.00 2.59
356 358 4.201940 CGCAATCCTCATCAAGTTATGCAA 60.202 41.667 0.00 0.00 0.00 4.08
362 364 8.757982 ATCCTCATCAAGTTATGCAAGTTATT 57.242 30.769 0.00 0.00 0.00 1.40
401 404 0.598065 AAAATGCCACCTCGTCAAGC 59.402 50.000 0.00 0.00 0.00 4.01
403 406 0.322816 AATGCCACCTCGTCAAGCAT 60.323 50.000 0.00 0.00 45.68 3.79
411 414 4.034048 CCACCTCGTCAAGCATTTACATAC 59.966 45.833 0.00 0.00 0.00 2.39
413 416 5.005779 CACCTCGTCAAGCATTTACATACTC 59.994 44.000 0.00 0.00 0.00 2.59
415 418 4.439057 TCGTCAAGCATTTACATACTCCC 58.561 43.478 0.00 0.00 0.00 4.30
417 420 4.508124 CGTCAAGCATTTACATACTCCCTC 59.492 45.833 0.00 0.00 0.00 4.30
418 421 4.816925 GTCAAGCATTTACATACTCCCTCC 59.183 45.833 0.00 0.00 0.00 4.30
420 423 3.039011 AGCATTTACATACTCCCTCCGT 58.961 45.455 0.00 0.00 0.00 4.69
421 424 3.069729 AGCATTTACATACTCCCTCCGTC 59.930 47.826 0.00 0.00 0.00 4.79
422 425 3.802675 GCATTTACATACTCCCTCCGTCC 60.803 52.174 0.00 0.00 0.00 4.79
423 426 2.077687 TTACATACTCCCTCCGTCCC 57.922 55.000 0.00 0.00 0.00 4.46
424 427 0.928505 TACATACTCCCTCCGTCCCA 59.071 55.000 0.00 0.00 0.00 4.37
425 428 0.264955 ACATACTCCCTCCGTCCCAT 59.735 55.000 0.00 0.00 0.00 4.00
426 429 1.502039 ACATACTCCCTCCGTCCCATA 59.498 52.381 0.00 0.00 0.00 2.74
427 430 2.090943 ACATACTCCCTCCGTCCCATAA 60.091 50.000 0.00 0.00 0.00 1.90
428 431 2.077687 TACTCCCTCCGTCCCATAAC 57.922 55.000 0.00 0.00 0.00 1.89
429 432 0.042131 ACTCCCTCCGTCCCATAACA 59.958 55.000 0.00 0.00 0.00 2.41
430 433 0.464452 CTCCCTCCGTCCCATAACAC 59.536 60.000 0.00 0.00 0.00 3.32
431 434 0.252330 TCCCTCCGTCCCATAACACA 60.252 55.000 0.00 0.00 0.00 3.72
432 435 0.616371 CCCTCCGTCCCATAACACAA 59.384 55.000 0.00 0.00 0.00 3.33
433 436 1.406887 CCCTCCGTCCCATAACACAAG 60.407 57.143 0.00 0.00 0.00 3.16
434 437 1.553248 CCTCCGTCCCATAACACAAGA 59.447 52.381 0.00 0.00 0.00 3.02
435 438 2.170607 CCTCCGTCCCATAACACAAGAT 59.829 50.000 0.00 0.00 0.00 2.40
436 439 3.198068 CTCCGTCCCATAACACAAGATG 58.802 50.000 0.00 0.00 0.00 2.90
437 440 2.569853 TCCGTCCCATAACACAAGATGT 59.430 45.455 0.00 0.00 46.42 3.06
478 481 9.705103 AAACATCTTATATTATGGGATGGATGG 57.295 33.333 17.20 0.00 38.33 3.51
489 492 4.111577 TGGGATGGATGGAGTACTTCTTT 58.888 43.478 2.07 0.00 0.00 2.52
490 493 4.080356 TGGGATGGATGGAGTACTTCTTTG 60.080 45.833 2.07 0.00 0.00 2.77
583 593 9.528489 TTTAAGCACCTACTTATCCATCTTTTT 57.472 29.630 0.00 0.00 32.35 1.94
611 623 9.228949 GAAGACATTGGCATATTATGAAGAGAT 57.771 33.333 7.87 0.00 0.00 2.75
650 666 5.606761 ACTTCCAGGGGTCCTTTAGTATAA 58.393 41.667 0.00 0.00 0.00 0.98
651 667 6.034003 ACTTCCAGGGGTCCTTTAGTATAAA 58.966 40.000 0.00 0.00 0.00 1.40
658 677 9.955102 CAGGGGTCCTTTAGTATAAATAATACC 57.045 37.037 0.00 0.00 41.33 2.73
722 741 1.445582 CTACACGTGGAAGCCGGAC 60.446 63.158 21.57 0.00 0.00 4.79
751 770 4.135153 CGAGGCCAGTCTCCACGG 62.135 72.222 5.01 0.00 34.73 4.94
752 771 2.680352 GAGGCCAGTCTCCACGGA 60.680 66.667 5.01 0.00 0.00 4.69
765 784 1.006102 CACGGAGAAGCAACGACCT 60.006 57.895 0.00 0.00 0.00 3.85
775 794 2.110213 AACGACCTCGGCAAGCAA 59.890 55.556 0.00 0.00 44.95 3.91
778 800 1.082104 CGACCTCGGCAAGCAAAAC 60.082 57.895 0.00 0.00 35.37 2.43
812 834 2.508439 GATCTCGACGGCCGCAAA 60.508 61.111 28.58 9.67 38.37 3.68
813 835 2.509336 ATCTCGACGGCCGCAAAG 60.509 61.111 28.58 19.63 38.37 2.77
1304 1336 4.008933 GGCCAGCAGTCCGTCACT 62.009 66.667 0.00 0.00 34.67 3.41
1313 1345 1.122019 AGTCCGTCACTGGCTTTCCT 61.122 55.000 0.00 0.00 32.26 3.36
1360 1392 1.080907 TGGGTGCCTCTCCATCTCA 59.919 57.895 0.00 0.00 0.00 3.27
1387 1419 1.513800 CATTTCGCGCAATTGCCGA 60.514 52.632 28.44 28.44 40.20 5.54
1406 1438 3.125829 CCGACATCTTCCAAGTTCATGTG 59.874 47.826 0.00 0.00 0.00 3.21
1523 1558 7.431376 GTGCATGATGTCATATCAAAGAAACAG 59.569 37.037 0.00 0.00 34.26 3.16
1525 1560 8.350722 GCATGATGTCATATCAAAGAAACAGAT 58.649 33.333 0.00 0.00 34.26 2.90
1542 1577 9.775854 AGAAACAGATGAATGGTATAGAGAATG 57.224 33.333 0.00 0.00 0.00 2.67
1579 1614 4.459337 GGTCTGGATGGAGAAAAACGAATT 59.541 41.667 0.00 0.00 0.00 2.17
1592 1627 7.196331 AGAAAAACGAATTATTAGGCATCAGC 58.804 34.615 0.00 0.00 41.10 4.26
1626 1661 4.578516 CCACTTACATTGTCCAAACTGTGA 59.421 41.667 0.00 0.00 0.00 3.58
1629 1664 7.202526 CACTTACATTGTCCAAACTGTGAAAT 58.797 34.615 0.00 0.00 0.00 2.17
1642 1677 6.436843 AACTGTGAAATTTTCTCACTTCGT 57.563 33.333 10.33 4.82 43.03 3.85
1645 1680 7.312899 ACTGTGAAATTTTCTCACTTCGTTTT 58.687 30.769 10.33 0.00 43.03 2.43
1685 1720 7.795047 TGTAGCTATCCAATCTGAAATCTCAA 58.205 34.615 0.00 0.00 0.00 3.02
1822 1858 5.048013 GGCTAAAGAATTGGCAGTTAACTGT 60.048 40.000 30.90 15.13 44.18 3.55
1858 1894 8.853077 TGATTTGTCTTTCATGTAGTCTGATT 57.147 30.769 0.00 0.00 0.00 2.57
1878 1914 0.984230 TTCCACCCTGAAGTAGGCAG 59.016 55.000 0.00 0.00 45.89 4.85
1891 1927 3.725634 AGTAGGCAGGGTTAGAAGATGT 58.274 45.455 0.00 0.00 0.00 3.06
1940 1976 2.101415 TGTATTCCTGCAGATCGTGAGG 59.899 50.000 17.39 0.00 0.00 3.86
2023 2059 1.877637 CAACACATGAGGACACGGAA 58.122 50.000 0.00 0.00 0.00 4.30
2096 2132 9.401058 GAGGTTAGTGTGATACCTAGTAAGTTA 57.599 37.037 0.00 0.00 42.21 2.24
2097 2133 9.406113 AGGTTAGTGTGATACCTAGTAAGTTAG 57.594 37.037 0.00 0.00 40.42 2.34
2098 2134 8.134261 GGTTAGTGTGATACCTAGTAAGTTAGC 58.866 40.741 0.00 0.00 0.00 3.09
2197 2235 1.490490 TGTGATTCCCAGTAGCCATCC 59.510 52.381 0.00 0.00 0.00 3.51
2277 2322 6.185511 CCACTCCCAATGCATCATATCTAAT 58.814 40.000 0.00 0.00 0.00 1.73
2344 2389 4.693566 TGTGCTTTGTATCTAAAGGGTTCG 59.306 41.667 0.00 0.00 37.96 3.95
2395 2443 6.670695 AGAATTCCAACTATGTGGCTTTTT 57.329 33.333 0.65 0.00 38.68 1.94
2450 2498 4.331168 CCTAATCAAGCACAGCTGAGTTAC 59.669 45.833 23.35 4.41 39.62 2.50
2451 2499 2.908688 TCAAGCACAGCTGAGTTACA 57.091 45.000 23.35 0.00 39.62 2.41
2493 2541 7.705325 ACCACGTAACTAATACTAGCAAATCAG 59.295 37.037 0.00 0.00 31.96 2.90
2578 2635 4.281435 TCACCACAAGCAATTTGATCACAT 59.719 37.500 0.00 0.00 39.21 3.21
2600 2657 8.408601 CACATATTTTAGTGAAGCATTAAGCCT 58.591 33.333 0.00 0.00 40.22 4.58
2645 2702 8.124823 CGTAGCAATTTGATTCACACAATCTAT 58.875 33.333 0.00 0.00 0.00 1.98
2646 2703 9.229784 GTAGCAATTTGATTCACACAATCTATG 57.770 33.333 0.00 0.00 0.00 2.23
2756 3397 2.550606 GCAAATACACGACCAAACTGGA 59.449 45.455 0.00 0.00 40.96 3.86
2760 3401 6.212955 CAAATACACGACCAAACTGGAATTT 58.787 36.000 0.00 0.00 40.96 1.82
2767 3408 6.920758 CACGACCAAACTGGAATTTATTTTCA 59.079 34.615 0.00 0.00 40.96 2.69
2768 3409 7.436673 CACGACCAAACTGGAATTTATTTTCAA 59.563 33.333 0.00 0.00 40.96 2.69
2887 3529 2.632377 CACGGAGGCAGTACATTCAAT 58.368 47.619 0.00 0.00 0.00 2.57
2908 3550 2.563620 TGGGAGCATGTACGTAACTCAA 59.436 45.455 15.51 4.59 0.00 3.02
2994 3637 1.285962 CAATGATGGAGGAGGGTTGGT 59.714 52.381 0.00 0.00 0.00 3.67
3027 3670 1.147817 GGATTGGGGGCATACAGGATT 59.852 52.381 0.00 0.00 0.00 3.01
3028 3671 2.242043 GATTGGGGGCATACAGGATTG 58.758 52.381 0.00 0.00 0.00 2.67
3042 3685 4.019174 ACAGGATTGGAACAGCATTTAGG 58.981 43.478 0.00 0.00 42.39 2.69
3043 3686 4.019174 CAGGATTGGAACAGCATTTAGGT 58.981 43.478 0.00 0.00 42.39 3.08
3044 3687 4.463891 CAGGATTGGAACAGCATTTAGGTT 59.536 41.667 0.00 0.00 42.39 3.50
3045 3688 5.652014 CAGGATTGGAACAGCATTTAGGTTA 59.348 40.000 0.00 0.00 42.39 2.85
3046 3689 5.888161 AGGATTGGAACAGCATTTAGGTTAG 59.112 40.000 0.00 0.00 42.39 2.34
3047 3690 5.885912 GGATTGGAACAGCATTTAGGTTAGA 59.114 40.000 0.00 0.00 42.39 2.10
3048 3691 6.183360 GGATTGGAACAGCATTTAGGTTAGAC 60.183 42.308 0.00 0.00 42.39 2.59
3049 3692 5.499004 TGGAACAGCATTTAGGTTAGACT 57.501 39.130 0.00 0.00 0.00 3.24
3111 3754 2.868583 CTGATGACTTTGGTAGCATCGG 59.131 50.000 0.00 0.00 38.83 4.18
3115 3758 0.676782 ACTTTGGTAGCATCGGTGGC 60.677 55.000 0.00 0.00 0.00 5.01
3171 3814 0.819582 GCATGGGAATGTGTTGGGAG 59.180 55.000 0.00 0.00 0.00 4.30
3196 3839 3.564218 GGGGAGGATGCAGCGGAT 61.564 66.667 0.00 0.00 0.00 4.18
3197 3840 2.512896 GGGAGGATGCAGCGGATT 59.487 61.111 0.00 0.00 0.00 3.01
3209 3852 2.192605 GCGGATTGCAAGATGGGTT 58.807 52.632 4.94 0.00 45.45 4.11
3245 4238 2.997897 GTGAGGCAGGAGGACGGT 60.998 66.667 0.00 0.00 0.00 4.83
3290 4283 1.632409 AGGGTATCATGGCATAGCAGG 59.368 52.381 0.00 0.00 0.00 4.85
3313 4306 8.482128 CAGGACCTGAGAAGAGAAACTTATATT 58.518 37.037 17.22 0.00 34.55 1.28
3391 4384 4.275936 GGTAGGTGGATAATTGACACATGC 59.724 45.833 9.99 7.07 36.87 4.06
3395 4388 4.158394 GGTGGATAATTGACACATGCTGTT 59.842 41.667 9.99 0.00 36.87 3.16
3417 4452 8.450578 TGTTAATGTTCTTGAATCAAGTGACT 57.549 30.769 20.91 9.83 41.66 3.41
3425 4460 4.754372 TGAATCAAGTGACTGACAATGC 57.246 40.909 0.00 0.00 0.00 3.56
3458 4493 0.393820 CAACTGCCAAGCCCAAATGT 59.606 50.000 0.00 0.00 0.00 2.71
3468 4503 2.137810 GCCCAAATGTTACCAGGCTA 57.862 50.000 0.00 0.00 37.42 3.93
3494 4529 5.356882 TTTAGCAGCTTGTATTGTGTGTC 57.643 39.130 0.00 0.00 0.00 3.67
3495 4530 2.849942 AGCAGCTTGTATTGTGTGTCA 58.150 42.857 0.00 0.00 0.00 3.58
3547 4583 5.304686 TGGGCATTCTTAAATCCTATCGT 57.695 39.130 0.00 0.00 0.00 3.73
3560 4596 1.705873 CTATCGTTAGGCCCAGGACT 58.294 55.000 0.00 0.00 37.24 3.85
3608 4644 8.824756 AGACTTATTACTAGGAACTCATGTGA 57.175 34.615 0.94 0.00 41.75 3.58
3691 4730 7.514784 TTTATTGAATCATGTATGAGCCCTG 57.485 36.000 0.74 0.00 40.64 4.45
3704 4743 3.614092 TGAGCCCTGAATCTTGAATGTC 58.386 45.455 0.00 0.00 0.00 3.06
3775 4814 2.945668 GACTATTGGAGGTGTGATTGCC 59.054 50.000 0.00 0.00 0.00 4.52
3797 4836 6.434965 TGCCTAAAATATGTGATGCATGCTAT 59.565 34.615 20.33 10.71 38.47 2.97
3807 4846 7.895975 TGTGATGCATGCTATCTATTTAGTC 57.104 36.000 20.33 1.02 0.00 2.59
3833 4872 6.710744 GCCTAACTTAATCTAGCTTAATGGCA 59.289 38.462 17.68 0.00 34.00 4.92
3839 4878 5.702349 AATCTAGCTTAATGGCATGCTTC 57.298 39.130 18.92 1.78 37.02 3.86
3856 4895 5.630415 TGCTTCTGGTATTATACAGGCTT 57.370 39.130 4.67 0.00 35.47 4.35
3910 4949 3.462021 AGATCAGAAGGTAAGATTGCGC 58.538 45.455 0.00 0.00 0.00 6.09
4164 5203 5.356751 ACATGCACTGTTTGTTCAAGAACTA 59.643 36.000 13.49 3.94 37.19 2.24
4327 6471 8.665685 GTGGTCTTGTTACAGTATTTTCTATGG 58.334 37.037 0.00 0.00 0.00 2.74
4337 6481 7.118723 ACAGTATTTTCTATGGATTCAGGCAA 58.881 34.615 0.00 0.00 0.00 4.52
4359 6504 7.600065 GCAATATGACATTTGCCTTCATAGAT 58.400 34.615 17.46 0.00 41.82 1.98
4364 6509 5.945191 TGACATTTGCCTTCATAGATGTGAA 59.055 36.000 0.00 0.00 36.70 3.18
4634 6822 5.382618 AACTCCGATTACAACTTAGACGT 57.617 39.130 0.00 0.00 0.00 4.34
4640 6828 5.393124 CGATTACAACTTAGACGTACACCA 58.607 41.667 0.00 0.00 0.00 4.17
4642 6830 5.512753 TTACAACTTAGACGTACACCACA 57.487 39.130 0.00 0.00 0.00 4.17
4643 6831 3.709987 ACAACTTAGACGTACACCACAC 58.290 45.455 0.00 0.00 0.00 3.82
4644 6832 3.130869 ACAACTTAGACGTACACCACACA 59.869 43.478 0.00 0.00 0.00 3.72
4646 6834 2.287188 ACTTAGACGTACACCACACACG 60.287 50.000 0.00 0.00 41.32 4.49
4648 6836 2.641783 GACGTACACCACACACGCG 61.642 63.158 3.53 3.53 39.23 6.01
4650 6838 2.660552 GTACACCACACACGCGCT 60.661 61.111 5.73 0.00 0.00 5.92
4652 6840 3.140225 TACACCACACACGCGCTCA 62.140 57.895 5.73 0.00 0.00 4.26
4654 6842 4.522689 ACCACACACGCGCTCACA 62.523 61.111 5.73 0.00 0.00 3.58
4655 6843 3.043713 CCACACACGCGCTCACAT 61.044 61.111 5.73 0.00 0.00 3.21
4656 6844 2.171701 CACACACGCGCTCACATG 59.828 61.111 5.73 0.00 0.00 3.21
4657 6845 3.043713 ACACACGCGCTCACATGG 61.044 61.111 5.73 0.00 0.00 3.66
4658 6846 3.043713 CACACGCGCTCACATGGT 61.044 61.111 5.73 0.00 0.00 3.55
4663 6851 2.101575 GCGCTCACATGGTGCATG 59.898 61.111 0.00 0.00 46.18 4.06
4667 6855 0.734889 GCTCACATGGTGCATGGTAC 59.265 55.000 0.00 0.00 45.16 3.34
4669 6857 0.392327 TCACATGGTGCATGGTACGG 60.392 55.000 0.00 0.00 45.16 4.02
4725 6913 2.250924 CTTGGAATGCTTGAACCCCTT 58.749 47.619 0.00 0.00 0.00 3.95
4820 7009 1.989165 GCTGCTTCTCTAGTGTCAACG 59.011 52.381 0.00 0.00 0.00 4.10
4887 7076 5.417894 CACAGGTATACTAGTTGAGTGTCCA 59.582 44.000 0.00 0.00 39.39 4.02
4893 7082 2.027745 ACTAGTTGAGTGTCCATGCTGG 60.028 50.000 0.00 0.00 36.87 4.85
4908 7097 0.033920 GCTGGCAGGAAACAAAAGGG 59.966 55.000 17.64 0.00 0.00 3.95
4927 7116 5.763876 AGGGATACACTAAAGCAGAAAGT 57.236 39.130 0.00 0.00 39.74 2.66
4935 7124 5.822519 ACACTAAAGCAGAAAGTGAATGACA 59.177 36.000 13.34 0.00 42.59 3.58
4938 7127 7.864379 CACTAAAGCAGAAAGTGAATGACAATT 59.136 33.333 3.26 0.00 42.59 2.32
4952 7149 2.042297 TGACAATTTGCACCATAGGGGA 59.958 45.455 0.00 0.00 41.15 4.81
4968 7165 1.530771 GGATCAGAGGCAGGCACAT 59.469 57.895 0.00 0.00 0.00 3.21
5043 7240 5.296813 GGTTTGACAGCGAGTTGAATATT 57.703 39.130 0.00 0.00 0.00 1.28
5045 7242 5.795441 GGTTTGACAGCGAGTTGAATATTTC 59.205 40.000 0.00 0.00 0.00 2.17
5052 7249 7.522374 ACAGCGAGTTGAATATTTCTTTTCTC 58.478 34.615 0.00 0.00 0.00 2.87
5075 7272 8.258007 TCTCGATGTCCTTATGTTTTCATAGTT 58.742 33.333 0.00 0.00 42.71 2.24
5082 7279 9.391006 GTCCTTATGTTTTCATAGTTGATGGTA 57.609 33.333 0.00 0.00 42.71 3.25
5089 7286 5.628797 TTCATAGTTGATGGTATCCTGCA 57.371 39.130 0.00 0.00 36.08 4.41
5090 7287 5.830799 TCATAGTTGATGGTATCCTGCAT 57.169 39.130 0.00 0.00 36.08 3.96
5091 7288 5.798132 TCATAGTTGATGGTATCCTGCATC 58.202 41.667 0.00 0.00 36.08 3.91
5092 7289 3.498774 AGTTGATGGTATCCTGCATCC 57.501 47.619 0.00 0.00 0.00 3.51
5093 7290 2.107204 AGTTGATGGTATCCTGCATCCC 59.893 50.000 0.00 0.00 0.00 3.85
5095 7292 3.274281 TGATGGTATCCTGCATCCCTA 57.726 47.619 0.00 0.00 0.00 3.53
5096 7293 3.806975 TGATGGTATCCTGCATCCCTAT 58.193 45.455 0.00 0.00 0.00 2.57
5097 7294 3.776969 TGATGGTATCCTGCATCCCTATC 59.223 47.826 0.00 0.00 0.00 2.08
5098 7295 3.567375 TGGTATCCTGCATCCCTATCT 57.433 47.619 0.00 0.00 0.00 1.98
5099 7296 3.176411 TGGTATCCTGCATCCCTATCTG 58.824 50.000 0.00 0.00 0.00 2.90
5103 7327 3.619900 TCCTGCATCCCTATCTGTAGT 57.380 47.619 0.00 0.00 0.00 2.73
5117 7341 7.005296 CCTATCTGTAGTGTGTACCCTTATCT 58.995 42.308 0.00 0.00 0.00 1.98
5124 7348 6.374417 AGTGTGTACCCTTATCTGATTTGT 57.626 37.500 0.00 0.00 0.00 2.83
5125 7349 7.490657 AGTGTGTACCCTTATCTGATTTGTA 57.509 36.000 0.00 0.00 0.00 2.41
5126 7350 7.913789 AGTGTGTACCCTTATCTGATTTGTAA 58.086 34.615 0.00 0.00 0.00 2.41
5127 7351 8.548877 AGTGTGTACCCTTATCTGATTTGTAAT 58.451 33.333 0.00 0.00 0.00 1.89
5169 7397 3.635373 TGTGCTCTTACCTATTAGACCCG 59.365 47.826 0.00 0.00 0.00 5.28
5170 7398 3.005578 GTGCTCTTACCTATTAGACCCGG 59.994 52.174 0.00 0.00 0.00 5.73
5189 7417 3.947834 CCGGATTATTTGCCTTTGACTCT 59.052 43.478 0.00 0.00 0.00 3.24
5190 7418 4.035675 CCGGATTATTTGCCTTTGACTCTC 59.964 45.833 0.00 0.00 0.00 3.20
5191 7419 4.260375 CGGATTATTTGCCTTTGACTCTCG 60.260 45.833 0.00 0.00 0.00 4.04
5192 7420 4.876107 GGATTATTTGCCTTTGACTCTCGA 59.124 41.667 0.00 0.00 0.00 4.04
5193 7421 5.354234 GGATTATTTGCCTTTGACTCTCGAA 59.646 40.000 0.00 0.00 0.00 3.71
5194 7422 6.128007 GGATTATTTGCCTTTGACTCTCGAAA 60.128 38.462 0.00 0.00 0.00 3.46
5195 7423 6.817765 TTATTTGCCTTTGACTCTCGAAAT 57.182 33.333 0.00 0.00 0.00 2.17
5196 7424 7.915293 TTATTTGCCTTTGACTCTCGAAATA 57.085 32.000 0.00 0.00 0.00 1.40
5197 7425 5.862924 TTTGCCTTTGACTCTCGAAATAG 57.137 39.130 0.00 0.00 0.00 1.73
5198 7426 3.861840 TGCCTTTGACTCTCGAAATAGG 58.138 45.455 0.00 0.00 0.00 2.57
5199 7427 2.609916 GCCTTTGACTCTCGAAATAGGC 59.390 50.000 0.00 0.00 0.00 3.93
5200 7428 3.680196 GCCTTTGACTCTCGAAATAGGCT 60.680 47.826 0.00 0.00 30.26 4.58
5201 7429 4.508662 CCTTTGACTCTCGAAATAGGCTT 58.491 43.478 0.00 0.00 0.00 4.35
5202 7430 4.938226 CCTTTGACTCTCGAAATAGGCTTT 59.062 41.667 0.00 0.00 0.00 3.51
5203 7431 5.064071 CCTTTGACTCTCGAAATAGGCTTTC 59.936 44.000 0.00 0.00 0.00 2.62
5215 7443 3.509659 GCTTTCGCCCCGCTTTAT 58.490 55.556 0.00 0.00 0.00 1.40
5216 7444 2.697819 GCTTTCGCCCCGCTTTATA 58.302 52.632 0.00 0.00 0.00 0.98
5217 7445 1.018910 GCTTTCGCCCCGCTTTATAA 58.981 50.000 0.00 0.00 0.00 0.98
5218 7446 1.402613 GCTTTCGCCCCGCTTTATAAA 59.597 47.619 0.00 0.00 0.00 1.40
5219 7447 2.034179 GCTTTCGCCCCGCTTTATAAAT 59.966 45.455 0.00 0.00 0.00 1.40
5220 7448 3.251487 GCTTTCGCCCCGCTTTATAAATA 59.749 43.478 0.00 0.00 0.00 1.40
5221 7449 4.261280 GCTTTCGCCCCGCTTTATAAATAA 60.261 41.667 0.00 0.00 0.00 1.40
5222 7450 5.733937 GCTTTCGCCCCGCTTTATAAATAAA 60.734 40.000 0.00 0.00 0.00 1.40
5241 7469 4.900635 AAAGCAACGATCCATACAATCC 57.099 40.909 0.00 0.00 0.00 3.01
5242 7470 3.558931 AGCAACGATCCATACAATCCA 57.441 42.857 0.00 0.00 0.00 3.41
5243 7471 3.884895 AGCAACGATCCATACAATCCAA 58.115 40.909 0.00 0.00 0.00 3.53
5244 7472 3.879295 AGCAACGATCCATACAATCCAAG 59.121 43.478 0.00 0.00 0.00 3.61
5245 7473 3.627577 GCAACGATCCATACAATCCAAGT 59.372 43.478 0.00 0.00 0.00 3.16
5246 7474 4.096382 GCAACGATCCATACAATCCAAGTT 59.904 41.667 0.00 0.00 0.00 2.66
5247 7475 5.730568 GCAACGATCCATACAATCCAAGTTC 60.731 44.000 0.00 0.00 0.00 3.01
5248 7476 5.097742 ACGATCCATACAATCCAAGTTCA 57.902 39.130 0.00 0.00 0.00 3.18
5249 7477 5.496556 ACGATCCATACAATCCAAGTTCAA 58.503 37.500 0.00 0.00 0.00 2.69
5250 7478 5.354234 ACGATCCATACAATCCAAGTTCAAC 59.646 40.000 0.00 0.00 0.00 3.18
5251 7479 5.586243 CGATCCATACAATCCAAGTTCAACT 59.414 40.000 0.00 0.00 0.00 3.16
5252 7480 6.457392 CGATCCATACAATCCAAGTTCAACTG 60.457 42.308 0.00 0.00 0.00 3.16
5253 7481 4.458989 TCCATACAATCCAAGTTCAACTGC 59.541 41.667 0.00 0.00 0.00 4.40
5254 7482 4.218200 CCATACAATCCAAGTTCAACTGCA 59.782 41.667 0.00 0.00 0.00 4.41
5255 7483 5.105635 CCATACAATCCAAGTTCAACTGCAT 60.106 40.000 0.00 0.00 0.00 3.96
5256 7484 4.942761 ACAATCCAAGTTCAACTGCATT 57.057 36.364 0.00 0.00 0.00 3.56
5257 7485 4.624015 ACAATCCAAGTTCAACTGCATTG 58.376 39.130 12.03 12.03 39.94 2.82
5258 7486 4.341806 ACAATCCAAGTTCAACTGCATTGA 59.658 37.500 17.45 7.27 45.92 2.57
5270 7498 3.240684 GCATTGAGCATACAACGGC 57.759 52.632 0.00 0.00 44.79 5.68
5271 7499 0.734889 GCATTGAGCATACAACGGCT 59.265 50.000 0.00 0.00 44.79 5.52
5272 7500 1.532505 GCATTGAGCATACAACGGCTG 60.533 52.381 0.00 0.00 44.79 4.85
5273 7501 1.064505 CATTGAGCATACAACGGCTGG 59.935 52.381 0.00 0.00 41.22 4.85
5274 7502 0.676466 TTGAGCATACAACGGCTGGG 60.676 55.000 0.00 0.00 41.22 4.45
5275 7503 1.819632 GAGCATACAACGGCTGGGG 60.820 63.158 0.00 0.00 41.22 4.96
5276 7504 3.518068 GCATACAACGGCTGGGGC 61.518 66.667 0.00 0.00 37.82 5.80
5290 7518 3.776158 GGGCCACAGCACAATCAA 58.224 55.556 4.39 0.00 44.19 2.57
5291 7519 1.588082 GGGCCACAGCACAATCAAG 59.412 57.895 4.39 0.00 44.19 3.02
5292 7520 1.080298 GGCCACAGCACAATCAAGC 60.080 57.895 0.00 0.00 42.56 4.01
5293 7521 1.080298 GCCACAGCACAATCAAGCC 60.080 57.895 0.00 0.00 39.53 4.35
5294 7522 1.588082 CCACAGCACAATCAAGCCC 59.412 57.895 0.00 0.00 0.00 5.19
5295 7523 1.180456 CCACAGCACAATCAAGCCCA 61.180 55.000 0.00 0.00 0.00 5.36
5296 7524 0.675083 CACAGCACAATCAAGCCCAA 59.325 50.000 0.00 0.00 0.00 4.12
5297 7525 1.068895 CACAGCACAATCAAGCCCAAA 59.931 47.619 0.00 0.00 0.00 3.28
5298 7526 1.761784 ACAGCACAATCAAGCCCAAAA 59.238 42.857 0.00 0.00 0.00 2.44
5299 7527 2.170187 ACAGCACAATCAAGCCCAAAAA 59.830 40.909 0.00 0.00 0.00 1.94
5330 7558 8.662781 AAAAGAAATAGAAAGAAAAAGCCACC 57.337 30.769 0.00 0.00 0.00 4.61
5331 7559 7.603180 AAGAAATAGAAAGAAAAAGCCACCT 57.397 32.000 0.00 0.00 0.00 4.00
5332 7560 8.706322 AAGAAATAGAAAGAAAAAGCCACCTA 57.294 30.769 0.00 0.00 0.00 3.08
5333 7561 8.341892 AGAAATAGAAAGAAAAAGCCACCTAG 57.658 34.615 0.00 0.00 0.00 3.02
5334 7562 7.945109 AGAAATAGAAAGAAAAAGCCACCTAGT 59.055 33.333 0.00 0.00 0.00 2.57
5335 7563 7.454260 AATAGAAAGAAAAAGCCACCTAGTG 57.546 36.000 0.00 0.00 0.00 2.74
5344 7572 4.063967 CACCTAGTGGCGTCCGCA 62.064 66.667 14.19 0.00 44.11 5.69
5345 7573 3.075005 ACCTAGTGGCGTCCGCAT 61.075 61.111 14.19 1.47 44.11 4.73
5346 7574 1.755395 ACCTAGTGGCGTCCGCATA 60.755 57.895 14.19 0.00 44.11 3.14
5347 7575 1.324740 ACCTAGTGGCGTCCGCATAA 61.325 55.000 14.19 0.00 44.11 1.90
5348 7576 0.874607 CCTAGTGGCGTCCGCATAAC 60.875 60.000 14.19 8.42 44.11 1.89
5349 7577 1.206745 CTAGTGGCGTCCGCATAACG 61.207 60.000 14.19 0.00 44.11 3.18
5358 7586 4.388007 CGCATAACGGCACTACGA 57.612 55.556 0.00 0.00 38.44 3.43
5359 7587 2.204491 CGCATAACGGCACTACGAG 58.796 57.895 0.00 0.00 38.44 4.18
5360 7588 0.248336 CGCATAACGGCACTACGAGA 60.248 55.000 0.00 0.00 38.44 4.04
5361 7589 1.796253 CGCATAACGGCACTACGAGAA 60.796 52.381 0.00 0.00 38.44 2.87
5362 7590 2.264813 GCATAACGGCACTACGAGAAA 58.735 47.619 0.00 0.00 37.61 2.52
5363 7591 2.281762 GCATAACGGCACTACGAGAAAG 59.718 50.000 0.00 0.00 37.61 2.62
5364 7592 3.766151 CATAACGGCACTACGAGAAAGA 58.234 45.455 0.00 0.00 37.61 2.52
5365 7593 4.360563 CATAACGGCACTACGAGAAAGAT 58.639 43.478 0.00 0.00 37.61 2.40
5366 7594 5.516996 CATAACGGCACTACGAGAAAGATA 58.483 41.667 0.00 0.00 37.61 1.98
5367 7595 3.694535 ACGGCACTACGAGAAAGATAG 57.305 47.619 0.00 0.00 37.61 2.08
5368 7596 3.015327 ACGGCACTACGAGAAAGATAGT 58.985 45.455 0.00 0.00 37.61 2.12
5369 7597 3.065095 ACGGCACTACGAGAAAGATAGTC 59.935 47.826 0.00 0.00 37.61 2.59
5370 7598 3.619729 GGCACTACGAGAAAGATAGTCG 58.380 50.000 0.00 0.00 39.63 4.18
5371 7599 3.311871 GGCACTACGAGAAAGATAGTCGA 59.688 47.826 0.00 0.00 37.16 4.20
5372 7600 4.273274 GCACTACGAGAAAGATAGTCGAC 58.727 47.826 7.70 7.70 37.16 4.20
5373 7601 4.507134 CACTACGAGAAAGATAGTCGACG 58.493 47.826 10.46 0.00 37.16 5.12
5374 7602 2.455295 ACGAGAAAGATAGTCGACGC 57.545 50.000 10.46 3.92 37.16 5.19
5375 7603 1.736126 ACGAGAAAGATAGTCGACGCA 59.264 47.619 10.46 2.27 37.16 5.24
5376 7604 2.102633 CGAGAAAGATAGTCGACGCAC 58.897 52.381 10.46 5.40 35.70 5.34
5377 7605 2.452105 GAGAAAGATAGTCGACGCACC 58.548 52.381 10.46 1.08 0.00 5.01
5378 7606 1.189403 GAAAGATAGTCGACGCACCG 58.811 55.000 10.46 0.00 0.00 4.94
5379 7607 0.806868 AAAGATAGTCGACGCACCGA 59.193 50.000 10.46 0.00 36.06 4.69
5380 7608 0.806868 AAGATAGTCGACGCACCGAA 59.193 50.000 10.46 0.00 40.51 4.30
5381 7609 0.377554 AGATAGTCGACGCACCGAAG 59.622 55.000 10.46 0.00 40.51 3.79
5382 7610 1.201098 GATAGTCGACGCACCGAAGC 61.201 60.000 10.46 0.00 40.51 3.86
5383 7611 2.609183 ATAGTCGACGCACCGAAGCC 62.609 60.000 10.46 0.00 40.51 4.35
5385 7613 4.717629 TCGACGCACCGAAGCCAG 62.718 66.667 0.00 0.00 35.42 4.85
5386 7614 4.717629 CGACGCACCGAAGCCAGA 62.718 66.667 0.00 0.00 0.00 3.86
5387 7615 2.357034 GACGCACCGAAGCCAGAA 60.357 61.111 0.00 0.00 0.00 3.02
5388 7616 2.357517 ACGCACCGAAGCCAGAAG 60.358 61.111 0.00 0.00 0.00 2.85
5389 7617 3.793144 CGCACCGAAGCCAGAAGC 61.793 66.667 0.00 0.00 44.25 3.86
5398 7626 3.028969 GCCAGAAGCGCATCCATC 58.971 61.111 11.47 0.00 0.00 3.51
5399 7627 1.820906 GCCAGAAGCGCATCCATCA 60.821 57.895 11.47 0.00 0.00 3.07
5400 7628 1.170919 GCCAGAAGCGCATCCATCAT 61.171 55.000 11.47 0.00 0.00 2.45
5401 7629 0.873054 CCAGAAGCGCATCCATCATC 59.127 55.000 11.47 0.00 0.00 2.92
5402 7630 1.589803 CAGAAGCGCATCCATCATCA 58.410 50.000 11.47 0.00 0.00 3.07
5403 7631 1.944709 CAGAAGCGCATCCATCATCAA 59.055 47.619 11.47 0.00 0.00 2.57
5404 7632 2.552743 CAGAAGCGCATCCATCATCAAT 59.447 45.455 11.47 0.00 0.00 2.57
5405 7633 2.812591 AGAAGCGCATCCATCATCAATC 59.187 45.455 11.47 0.00 0.00 2.67
5406 7634 1.531423 AGCGCATCCATCATCAATCC 58.469 50.000 11.47 0.00 0.00 3.01
5407 7635 1.202842 AGCGCATCCATCATCAATCCA 60.203 47.619 11.47 0.00 0.00 3.41
5408 7636 1.610038 GCGCATCCATCATCAATCCAA 59.390 47.619 0.30 0.00 0.00 3.53
5409 7637 2.351447 GCGCATCCATCATCAATCCAAG 60.351 50.000 0.30 0.00 0.00 3.61
5410 7638 2.882761 CGCATCCATCATCAATCCAAGT 59.117 45.455 0.00 0.00 0.00 3.16
5411 7639 3.058432 CGCATCCATCATCAATCCAAGTC 60.058 47.826 0.00 0.00 0.00 3.01
5412 7640 3.058432 GCATCCATCATCAATCCAAGTCG 60.058 47.826 0.00 0.00 0.00 4.18
5413 7641 3.198409 TCCATCATCAATCCAAGTCGG 57.802 47.619 0.00 0.00 0.00 4.79
5414 7642 2.505407 TCCATCATCAATCCAAGTCGGT 59.495 45.455 0.00 0.00 35.57 4.69
5415 7643 2.874701 CCATCATCAATCCAAGTCGGTC 59.125 50.000 0.00 0.00 35.57 4.79
5416 7644 3.534554 CATCATCAATCCAAGTCGGTCA 58.465 45.455 0.00 0.00 35.57 4.02
5417 7645 2.972625 TCATCAATCCAAGTCGGTCAC 58.027 47.619 0.00 0.00 35.57 3.67
5418 7646 1.660607 CATCAATCCAAGTCGGTCACG 59.339 52.381 0.00 0.00 42.74 4.35
5427 7655 2.178273 TCGGTCACGATCACGCTG 59.822 61.111 0.00 0.00 45.59 5.18
5428 7656 3.545481 CGGTCACGATCACGCTGC 61.545 66.667 0.00 0.00 44.60 5.25
5429 7657 3.188786 GGTCACGATCACGCTGCC 61.189 66.667 0.00 0.00 43.96 4.85
5430 7658 2.125912 GTCACGATCACGCTGCCT 60.126 61.111 0.00 0.00 43.96 4.75
5431 7659 2.161486 GTCACGATCACGCTGCCTC 61.161 63.158 0.00 0.00 43.96 4.70
5432 7660 3.250323 CACGATCACGCTGCCTCG 61.250 66.667 0.00 0.62 43.96 4.63
5433 7661 3.440415 ACGATCACGCTGCCTCGA 61.440 61.111 13.15 0.00 43.96 4.04
5434 7662 2.653448 CGATCACGCTGCCTCGAG 60.653 66.667 5.13 5.13 33.07 4.04
5435 7663 2.801421 GATCACGCTGCCTCGAGA 59.199 61.111 15.71 0.00 33.97 4.04
5436 7664 1.299014 GATCACGCTGCCTCGAGAG 60.299 63.158 15.71 5.26 33.06 3.20
5437 7665 3.423162 ATCACGCTGCCTCGAGAGC 62.423 63.158 15.71 14.99 33.06 4.09
5438 7666 4.426112 CACGCTGCCTCGAGAGCA 62.426 66.667 21.82 21.90 38.82 4.26
5443 7671 4.074526 TGCCTCGAGAGCAGGTGC 62.075 66.667 20.28 11.53 42.49 5.01
5444 7672 4.828925 GCCTCGAGAGCAGGTGCC 62.829 72.222 15.71 0.00 43.38 5.01
5445 7673 4.504916 CCTCGAGAGCAGGTGCCG 62.505 72.222 15.71 0.00 43.38 5.69
5446 7674 4.504916 CTCGAGAGCAGGTGCCGG 62.505 72.222 6.58 0.00 43.38 6.13
5458 7686 4.577677 TGCCGGTGCTGCAGGAAA 62.578 61.111 17.12 0.00 38.71 3.13
5459 7687 3.741476 GCCGGTGCTGCAGGAAAG 61.741 66.667 17.12 9.98 34.10 2.62
5460 7688 3.741476 CCGGTGCTGCAGGAAAGC 61.741 66.667 17.12 1.14 41.22 3.51
5465 7693 4.085876 GCTGCAGGAAAGCAAGGA 57.914 55.556 17.12 0.00 45.13 3.36
5466 7694 2.344535 GCTGCAGGAAAGCAAGGAA 58.655 52.632 17.12 0.00 45.13 3.36
5467 7695 0.893447 GCTGCAGGAAAGCAAGGAAT 59.107 50.000 17.12 0.00 45.13 3.01
5468 7696 1.274447 GCTGCAGGAAAGCAAGGAATT 59.726 47.619 17.12 0.00 45.13 2.17
5469 7697 2.289257 GCTGCAGGAAAGCAAGGAATTT 60.289 45.455 17.12 0.00 45.13 1.82
5470 7698 3.323243 CTGCAGGAAAGCAAGGAATTTG 58.677 45.455 5.57 0.00 45.13 2.32
5471 7699 2.964464 TGCAGGAAAGCAAGGAATTTGA 59.036 40.909 0.00 0.00 42.46 2.69
5472 7700 3.387374 TGCAGGAAAGCAAGGAATTTGAA 59.613 39.130 0.00 0.00 42.46 2.69
5473 7701 3.992427 GCAGGAAAGCAAGGAATTTGAAG 59.008 43.478 0.00 0.00 39.21 3.02
5474 7702 4.262164 GCAGGAAAGCAAGGAATTTGAAGA 60.262 41.667 0.00 0.00 39.21 2.87
5475 7703 5.467705 CAGGAAAGCAAGGAATTTGAAGAG 58.532 41.667 0.00 0.00 39.21 2.85
5476 7704 4.525874 AGGAAAGCAAGGAATTTGAAGAGG 59.474 41.667 0.00 0.00 39.21 3.69
5477 7705 4.322273 GGAAAGCAAGGAATTTGAAGAGGG 60.322 45.833 0.00 0.00 39.21 4.30
5478 7706 3.814504 AGCAAGGAATTTGAAGAGGGA 57.185 42.857 0.00 0.00 39.21 4.20
5479 7707 3.694926 AGCAAGGAATTTGAAGAGGGAG 58.305 45.455 0.00 0.00 39.21 4.30
5480 7708 3.075134 AGCAAGGAATTTGAAGAGGGAGT 59.925 43.478 0.00 0.00 39.21 3.85
5481 7709 3.441922 GCAAGGAATTTGAAGAGGGAGTC 59.558 47.826 0.00 0.00 39.21 3.36
5482 7710 4.655963 CAAGGAATTTGAAGAGGGAGTCA 58.344 43.478 0.00 0.00 39.21 3.41
5483 7711 4.293662 AGGAATTTGAAGAGGGAGTCAC 57.706 45.455 0.00 0.00 0.00 3.67
5484 7712 3.652869 AGGAATTTGAAGAGGGAGTCACA 59.347 43.478 0.00 0.00 0.00 3.58
5485 7713 3.753797 GGAATTTGAAGAGGGAGTCACAC 59.246 47.826 0.00 0.00 0.00 3.82
5486 7714 2.526304 TTTGAAGAGGGAGTCACACG 57.474 50.000 0.00 0.00 0.00 4.49
5487 7715 0.033504 TTGAAGAGGGAGTCACACGC 59.966 55.000 0.00 0.00 0.00 5.34
5488 7716 1.079750 GAAGAGGGAGTCACACGCC 60.080 63.158 0.00 0.00 37.34 5.68
5489 7717 1.534235 AAGAGGGAGTCACACGCCT 60.534 57.895 0.00 0.00 38.21 5.52
5490 7718 1.122019 AAGAGGGAGTCACACGCCTT 61.122 55.000 0.00 0.00 38.21 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 6.702282 GTCTATATAACTTTGACTGTCTGGGC 59.298 42.308 9.51 0.00 0.00 5.36
2 3 7.782049 TGTCTATATAACTTTGACTGTCTGGG 58.218 38.462 9.51 1.69 0.00 4.45
4 5 9.729023 CTCTGTCTATATAACTTTGACTGTCTG 57.271 37.037 9.51 2.35 0.00 3.51
5 6 8.908903 CCTCTGTCTATATAACTTTGACTGTCT 58.091 37.037 9.51 0.00 0.00 3.41
6 7 8.904834 TCCTCTGTCTATATAACTTTGACTGTC 58.095 37.037 0.00 0.00 0.00 3.51
7 8 8.824756 TCCTCTGTCTATATAACTTTGACTGT 57.175 34.615 0.00 0.00 0.00 3.55
10 11 9.828852 CGTATCCTCTGTCTATATAACTTTGAC 57.171 37.037 0.00 0.00 0.00 3.18
11 12 9.011095 CCGTATCCTCTGTCTATATAACTTTGA 57.989 37.037 0.00 0.00 0.00 2.69
15 16 6.723339 AGCCGTATCCTCTGTCTATATAACT 58.277 40.000 0.00 0.00 0.00 2.24
16 17 7.393841 AAGCCGTATCCTCTGTCTATATAAC 57.606 40.000 0.00 0.00 0.00 1.89
21 22 5.244189 TCTAAGCCGTATCCTCTGTCTAT 57.756 43.478 0.00 0.00 0.00 1.98
25 26 3.130693 GTGTTCTAAGCCGTATCCTCTGT 59.869 47.826 0.00 0.00 0.00 3.41
35 36 3.245284 CGAATATGGTGTGTTCTAAGCCG 59.755 47.826 0.00 0.00 0.00 5.52
37 38 5.050972 GCTACGAATATGGTGTGTTCTAAGC 60.051 44.000 0.00 0.00 31.46 3.09
42 43 2.538449 CGGCTACGAATATGGTGTGTTC 59.462 50.000 0.00 0.00 44.60 3.18
54 55 2.264813 GTTGCAATCTACGGCTACGAA 58.735 47.619 0.59 0.00 44.60 3.85
61 62 4.870426 AGTCTATGTTGTTGCAATCTACGG 59.130 41.667 0.59 0.10 0.00 4.02
65 66 7.744087 TTACAAGTCTATGTTGTTGCAATCT 57.256 32.000 0.59 0.00 38.98 2.40
68 69 9.225436 TGATATTACAAGTCTATGTTGTTGCAA 57.775 29.630 0.00 0.00 38.98 4.08
69 70 8.785329 TGATATTACAAGTCTATGTTGTTGCA 57.215 30.769 0.00 0.00 38.98 4.08
78 79 8.475639 ACGGTTCTGTTGATATTACAAGTCTAT 58.524 33.333 0.00 0.00 0.00 1.98
81 82 6.963049 ACGGTTCTGTTGATATTACAAGTC 57.037 37.500 0.00 0.00 0.00 3.01
83 84 8.592998 GTTCTACGGTTCTGTTGATATTACAAG 58.407 37.037 0.00 0.00 0.00 3.16
90 91 4.696877 TCTCGTTCTACGGTTCTGTTGATA 59.303 41.667 0.00 0.00 42.81 2.15
98 99 2.633199 AGCTTCTCGTTCTACGGTTC 57.367 50.000 0.00 0.00 42.81 3.62
100 101 4.082354 ACAAATAGCTTCTCGTTCTACGGT 60.082 41.667 0.00 0.00 42.81 4.83
105 106 5.725362 AGCTTACAAATAGCTTCTCGTTCT 58.275 37.500 0.00 0.00 46.42 3.01
110 111 7.810282 TCGATGATAGCTTACAAATAGCTTCTC 59.190 37.037 2.39 2.26 46.42 2.87
115 116 5.348997 GGGTCGATGATAGCTTACAAATAGC 59.651 44.000 0.00 0.00 38.93 2.97
119 120 4.442893 CCAGGGTCGATGATAGCTTACAAA 60.443 45.833 0.00 0.00 0.00 2.83
128 129 4.561500 TTTTTCACCAGGGTCGATGATA 57.438 40.909 0.00 0.00 0.00 2.15
130 131 2.940994 TTTTTCACCAGGGTCGATGA 57.059 45.000 0.00 0.00 0.00 2.92
135 136 4.600062 AGACCATATTTTTCACCAGGGTC 58.400 43.478 0.00 0.00 42.94 4.46
153 154 8.151596 GGGCCAGCTATTTAGATATATTAGACC 58.848 40.741 4.39 0.00 0.00 3.85
154 155 8.705594 TGGGCCAGCTATTTAGATATATTAGAC 58.294 37.037 0.00 0.00 0.00 2.59
157 158 8.624019 AGTGGGCCAGCTATTTAGATATATTA 57.376 34.615 6.40 0.00 0.00 0.98
158 159 7.516450 AGTGGGCCAGCTATTTAGATATATT 57.484 36.000 6.40 0.00 0.00 1.28
159 160 7.846823 AGTAGTGGGCCAGCTATTTAGATATAT 59.153 37.037 6.40 0.00 0.00 0.86
165 166 4.833380 TCTAGTAGTGGGCCAGCTATTTAG 59.167 45.833 6.40 15.63 0.00 1.85
167 168 3.654273 TCTAGTAGTGGGCCAGCTATTT 58.346 45.455 6.40 7.29 0.00 1.40
175 176 4.515567 GTGCAAATAATCTAGTAGTGGGCC 59.484 45.833 0.00 0.00 0.00 5.80
176 177 5.123227 TGTGCAAATAATCTAGTAGTGGGC 58.877 41.667 0.00 0.00 0.00 5.36
200 202 3.034924 GGTGACATGAAAGCACCCA 57.965 52.632 15.78 0.00 44.86 4.51
209 211 3.392947 TCCCAACAACTAAGGTGACATGA 59.607 43.478 0.00 0.00 0.00 3.07
229 231 4.219288 ACTCAATTTTGATTGGAGCACTCC 59.781 41.667 9.88 9.88 42.29 3.85
238 240 5.121142 GGTTGATGCCACTCAATTTTGATTG 59.879 40.000 4.22 4.22 37.47 2.67
239 241 5.221682 TGGTTGATGCCACTCAATTTTGATT 60.222 36.000 0.00 0.00 37.47 2.57
283 285 8.896722 TCCCTCTGTAAACTAAGTAAGATCTT 57.103 34.615 13.56 13.56 0.00 2.40
284 286 8.751242 GTTCCCTCTGTAAACTAAGTAAGATCT 58.249 37.037 0.00 0.00 0.00 2.75
285 287 8.529476 TGTTCCCTCTGTAAACTAAGTAAGATC 58.471 37.037 0.00 0.00 0.00 2.75
286 288 8.431910 TGTTCCCTCTGTAAACTAAGTAAGAT 57.568 34.615 0.00 0.00 0.00 2.40
288 290 8.532819 AGATGTTCCCTCTGTAAACTAAGTAAG 58.467 37.037 0.00 0.00 0.00 2.34
289 291 8.431910 AGATGTTCCCTCTGTAAACTAAGTAA 57.568 34.615 0.00 0.00 0.00 2.24
294 296 6.430000 GCAAAAGATGTTCCCTCTGTAAACTA 59.570 38.462 0.00 0.00 0.00 2.24
295 297 5.241728 GCAAAAGATGTTCCCTCTGTAAACT 59.758 40.000 0.00 0.00 0.00 2.66
296 298 5.009610 TGCAAAAGATGTTCCCTCTGTAAAC 59.990 40.000 0.00 0.00 0.00 2.01
298 300 4.724399 TGCAAAAGATGTTCCCTCTGTAA 58.276 39.130 0.00 0.00 0.00 2.41
299 301 4.365514 TGCAAAAGATGTTCCCTCTGTA 57.634 40.909 0.00 0.00 0.00 2.74
300 302 3.228188 TGCAAAAGATGTTCCCTCTGT 57.772 42.857 0.00 0.00 0.00 3.41
301 303 4.796038 AATGCAAAAGATGTTCCCTCTG 57.204 40.909 0.00 0.00 0.00 3.35
302 304 8.773033 ATATTAATGCAAAAGATGTTCCCTCT 57.227 30.769 0.00 0.00 0.00 3.69
305 307 9.860898 GGATATATTAATGCAAAAGATGTTCCC 57.139 33.333 0.00 0.00 0.00 3.97
308 310 9.897744 CGTGGATATATTAATGCAAAAGATGTT 57.102 29.630 0.00 0.00 0.00 2.71
309 311 8.023128 GCGTGGATATATTAATGCAAAAGATGT 58.977 33.333 0.00 0.00 0.00 3.06
310 312 8.022550 TGCGTGGATATATTAATGCAAAAGATG 58.977 33.333 11.17 0.00 31.88 2.90
311 313 8.109705 TGCGTGGATATATTAATGCAAAAGAT 57.890 30.769 11.17 0.00 31.88 2.40
312 314 7.503521 TGCGTGGATATATTAATGCAAAAGA 57.496 32.000 11.17 0.00 31.88 2.52
313 315 8.746922 ATTGCGTGGATATATTAATGCAAAAG 57.253 30.769 22.07 0.00 44.93 2.27
314 316 7.812191 GGATTGCGTGGATATATTAATGCAAAA 59.188 33.333 22.07 9.43 44.93 2.44
315 317 7.176515 AGGATTGCGTGGATATATTAATGCAAA 59.823 33.333 22.07 12.22 44.93 3.68
316 318 6.658816 AGGATTGCGTGGATATATTAATGCAA 59.341 34.615 21.17 21.17 45.60 4.08
317 319 6.179756 AGGATTGCGTGGATATATTAATGCA 58.820 36.000 10.03 10.03 32.92 3.96
318 320 6.316140 TGAGGATTGCGTGGATATATTAATGC 59.684 38.462 0.00 6.05 0.00 3.56
319 321 7.848223 TGAGGATTGCGTGGATATATTAATG 57.152 36.000 0.00 0.00 0.00 1.90
320 322 8.267183 TGATGAGGATTGCGTGGATATATTAAT 58.733 33.333 0.00 0.00 0.00 1.40
321 323 7.619965 TGATGAGGATTGCGTGGATATATTAA 58.380 34.615 0.00 0.00 0.00 1.40
322 324 7.181569 TGATGAGGATTGCGTGGATATATTA 57.818 36.000 0.00 0.00 0.00 0.98
323 325 6.053632 TGATGAGGATTGCGTGGATATATT 57.946 37.500 0.00 0.00 0.00 1.28
324 326 5.682234 TGATGAGGATTGCGTGGATATAT 57.318 39.130 0.00 0.00 0.00 0.86
325 327 5.012046 ACTTGATGAGGATTGCGTGGATATA 59.988 40.000 0.00 0.00 0.00 0.86
326 328 4.202398 ACTTGATGAGGATTGCGTGGATAT 60.202 41.667 0.00 0.00 0.00 1.63
327 329 3.134623 ACTTGATGAGGATTGCGTGGATA 59.865 43.478 0.00 0.00 0.00 2.59
328 330 2.092753 ACTTGATGAGGATTGCGTGGAT 60.093 45.455 0.00 0.00 0.00 3.41
329 331 1.278985 ACTTGATGAGGATTGCGTGGA 59.721 47.619 0.00 0.00 0.00 4.02
330 332 1.742761 ACTTGATGAGGATTGCGTGG 58.257 50.000 0.00 0.00 0.00 4.94
331 333 4.787563 GCATAACTTGATGAGGATTGCGTG 60.788 45.833 0.00 0.00 0.00 5.34
332 334 3.313526 GCATAACTTGATGAGGATTGCGT 59.686 43.478 0.00 0.00 0.00 5.24
333 335 3.313249 TGCATAACTTGATGAGGATTGCG 59.687 43.478 0.00 0.00 0.00 4.85
395 398 4.816925 GGAGGGAGTATGTAAATGCTTGAC 59.183 45.833 0.00 0.00 0.00 3.18
401 404 3.244112 GGGACGGAGGGAGTATGTAAATG 60.244 52.174 0.00 0.00 0.00 2.32
403 406 2.292389 TGGGACGGAGGGAGTATGTAAA 60.292 50.000 0.00 0.00 0.00 2.01
411 414 0.464452 GTGTTATGGGACGGAGGGAG 59.536 60.000 0.00 0.00 0.00 4.30
413 416 0.616371 TTGTGTTATGGGACGGAGGG 59.384 55.000 0.00 0.00 0.00 4.30
415 418 3.198068 CATCTTGTGTTATGGGACGGAG 58.802 50.000 0.00 0.00 0.00 4.63
417 420 2.985896 ACATCTTGTGTTATGGGACGG 58.014 47.619 0.00 0.00 38.01 4.79
452 455 9.705103 CCATCCATCCCATAATATAAGATGTTT 57.295 33.333 9.45 0.00 33.95 2.83
453 456 9.072460 TCCATCCATCCCATAATATAAGATGTT 57.928 33.333 9.45 0.00 33.95 2.71
454 457 8.642964 TCCATCCATCCCATAATATAAGATGT 57.357 34.615 9.45 0.00 33.95 3.06
455 458 8.721479 ACTCCATCCATCCCATAATATAAGATG 58.279 37.037 5.26 5.26 35.24 2.90
456 459 8.882704 ACTCCATCCATCCCATAATATAAGAT 57.117 34.615 0.00 0.00 0.00 2.40
457 460 9.213777 GTACTCCATCCATCCCATAATATAAGA 57.786 37.037 0.00 0.00 0.00 2.10
458 461 9.218525 AGTACTCCATCCATCCCATAATATAAG 57.781 37.037 0.00 0.00 0.00 1.73
461 464 7.908917 AGAAGTACTCCATCCATCCCATAATAT 59.091 37.037 0.00 0.00 0.00 1.28
467 470 3.421394 AGAAGTACTCCATCCATCCCA 57.579 47.619 0.00 0.00 0.00 4.37
472 475 4.993705 AACCAAAGAAGTACTCCATCCA 57.006 40.909 0.00 0.00 0.00 3.41
473 476 7.393515 ACAATAAACCAAAGAAGTACTCCATCC 59.606 37.037 0.00 0.00 0.00 3.51
474 477 8.336801 ACAATAAACCAAAGAAGTACTCCATC 57.663 34.615 0.00 0.00 0.00 3.51
475 478 8.706322 AACAATAAACCAAAGAAGTACTCCAT 57.294 30.769 0.00 0.00 0.00 3.41
476 479 8.528044 AAACAATAAACCAAAGAAGTACTCCA 57.472 30.769 0.00 0.00 0.00 3.86
556 566 9.528489 AAAAGATGGATAAGTAGGTGCTTAAAA 57.472 29.630 0.00 0.00 34.98 1.52
574 584 6.271488 TGCCAATGTCTTCTAAAAAGATGG 57.729 37.500 2.83 2.83 30.77 3.51
583 593 9.716531 CTCTTCATAATATGCCAATGTCTTCTA 57.283 33.333 0.00 0.00 0.00 2.10
584 594 8.435187 TCTCTTCATAATATGCCAATGTCTTCT 58.565 33.333 0.00 0.00 0.00 2.85
611 623 8.163408 CCCCTGGAAGTATTTTCATACATATGA 58.837 37.037 10.38 0.00 40.69 2.15
614 626 7.420913 GGACCCCTGGAAGTATTTTCATACATA 60.421 40.741 0.00 0.00 38.24 2.29
616 628 5.339695 GGACCCCTGGAAGTATTTTCATACA 60.340 44.000 0.00 0.00 38.24 2.29
619 631 3.858638 AGGACCCCTGGAAGTATTTTCAT 59.141 43.478 0.00 0.00 29.57 2.57
628 641 6.570654 TTTATACTAAAGGACCCCTGGAAG 57.429 41.667 0.00 0.00 32.13 3.46
629 642 8.641498 TTATTTATACTAAAGGACCCCTGGAA 57.359 34.615 0.00 0.00 32.13 3.53
631 644 9.955102 GTATTATTTATACTAAAGGACCCCTGG 57.045 37.037 0.00 0.00 36.88 4.45
650 666 3.390135 CGCGTCAGTGATGGGTATTATT 58.610 45.455 18.73 0.00 0.00 1.40
651 667 2.866460 GCGCGTCAGTGATGGGTATTAT 60.866 50.000 25.20 0.00 34.61 1.28
658 677 3.190849 CAGGCGCGTCAGTGATGG 61.191 66.667 15.58 5.60 0.00 3.51
737 756 2.680352 TCTCCGTGGAGACTGGCC 60.680 66.667 14.57 0.00 45.26 5.36
751 770 2.095252 GCCGAGGTCGTTGCTTCTC 61.095 63.158 0.00 0.00 37.74 2.87
752 771 2.048127 GCCGAGGTCGTTGCTTCT 60.048 61.111 0.00 0.00 37.74 2.85
765 784 2.548295 GGGACGTTTTGCTTGCCGA 61.548 57.895 0.00 0.00 0.00 5.54
815 837 3.969802 GTGCCTGGTGCTGTGTGC 61.970 66.667 0.00 0.00 42.00 4.57
816 838 3.653009 CGTGCCTGGTGCTGTGTG 61.653 66.667 0.00 0.00 42.00 3.82
817 839 3.814615 CTCGTGCCTGGTGCTGTGT 62.815 63.158 0.00 0.00 42.00 3.72
818 840 3.046087 CTCGTGCCTGGTGCTGTG 61.046 66.667 0.00 0.00 42.00 3.66
819 841 3.231889 CTCTCGTGCCTGGTGCTGT 62.232 63.158 0.00 0.00 42.00 4.40
821 843 2.601666 TCTCTCGTGCCTGGTGCT 60.602 61.111 0.00 0.00 42.00 4.40
822 844 2.433318 GTCTCTCGTGCCTGGTGC 60.433 66.667 0.00 0.00 41.77 5.01
823 845 2.262915 GGTCTCTCGTGCCTGGTG 59.737 66.667 0.00 0.00 0.00 4.17
1146 1176 2.159435 AGTTCCTCGCAACAACAACAAC 60.159 45.455 0.00 0.00 0.00 3.32
1304 1336 1.001520 TCGTCGATTTCAGGAAAGCCA 59.998 47.619 4.61 0.00 33.51 4.75
1310 1342 1.541379 TGGAGTCGTCGATTTCAGGA 58.459 50.000 0.00 0.00 0.00 3.86
1313 1345 3.130516 AGCTATTGGAGTCGTCGATTTCA 59.869 43.478 0.00 0.00 0.00 2.69
1360 1392 3.773860 TTGCGCGAAATGAAACCATAT 57.226 38.095 12.10 0.00 0.00 1.78
1387 1419 5.010012 GGTTTCACATGAACTTGGAAGATGT 59.990 40.000 0.00 0.00 33.13 3.06
1406 1438 8.229811 GCTTGATCAATTTAAAACCATGGTTTC 58.770 33.333 36.64 23.52 46.22 2.78
1505 1540 8.680001 CCATTCATCTGTTTCTTTGATATGACA 58.320 33.333 0.00 0.00 0.00 3.58
1506 1541 8.680903 ACCATTCATCTGTTTCTTTGATATGAC 58.319 33.333 0.00 0.00 0.00 3.06
1523 1558 9.330063 TGTTTGTCATTCTCTATACCATTCATC 57.670 33.333 0.00 0.00 0.00 2.92
1525 1560 9.685276 AATGTTTGTCATTCTCTATACCATTCA 57.315 29.630 0.00 0.00 42.35 2.57
1542 1577 5.106157 CCATCCAGACCTTACAATGTTTGTC 60.106 44.000 0.00 0.00 44.12 3.18
1579 1614 3.455910 AGGTGAACAGCTGATGCCTAATA 59.544 43.478 23.35 0.00 40.80 0.98
1592 1627 2.254546 TGTAAGTGGCAGGTGAACAG 57.745 50.000 0.00 0.00 0.00 3.16
1626 1661 7.093992 TCCAACAAAACGAAGTGAGAAAATTT 58.906 30.769 0.00 0.00 45.00 1.82
1629 1664 5.630661 TCCAACAAAACGAAGTGAGAAAA 57.369 34.783 0.00 0.00 45.00 2.29
1764 1800 2.770447 AGGTTGGGATTTTGGGTTTGT 58.230 42.857 0.00 0.00 0.00 2.83
1775 1811 6.041979 GCCACAAAATATCATTAGGTTGGGAT 59.958 38.462 0.00 0.00 0.00 3.85
1858 1894 1.351017 CTGCCTACTTCAGGGTGGAAA 59.649 52.381 0.00 0.00 45.66 3.13
1891 1927 4.973168 AGTCAAGCCTAGATGTTGAACAA 58.027 39.130 0.62 0.00 32.15 2.83
1940 1976 3.137533 GGCTGATGAATCAAGAGTAGGC 58.862 50.000 0.00 0.00 36.18 3.93
2023 2059 3.696045 TGCAAGTGGCTATGTAACCATT 58.304 40.909 0.00 0.00 45.15 3.16
2096 2132 7.934855 ACAGATTCTTCAACATATCAAAGCT 57.065 32.000 0.00 0.00 0.00 3.74
2167 2205 6.936900 GCTACTGGGAATCACATAATGTACAT 59.063 38.462 1.41 1.41 0.00 2.29
2197 2235 6.909550 AGCTTTACTCCTGACCATAGATAG 57.090 41.667 0.00 0.00 0.00 2.08
2315 2360 6.259608 CCCTTTAGATACAAAGCACATGAGAG 59.740 42.308 0.00 0.00 34.74 3.20
2322 2367 4.694037 ACGAACCCTTTAGATACAAAGCAC 59.306 41.667 0.00 0.00 34.74 4.40
2408 2456 1.730902 CTCGACAGTGGTCAGCGTG 60.731 63.158 0.00 0.00 44.54 5.34
2409 2457 2.645567 CTCGACAGTGGTCAGCGT 59.354 61.111 0.00 0.00 44.54 5.07
2453 2501 7.466746 AGTTACGTGGTTAACATCTAGGTAA 57.533 36.000 8.10 9.43 0.00 2.85
2454 2502 8.574251 TTAGTTACGTGGTTAACATCTAGGTA 57.426 34.615 8.10 4.35 0.00 3.08
2455 2503 5.990120 AGTTACGTGGTTAACATCTAGGT 57.010 39.130 8.10 5.22 0.00 3.08
2456 2504 9.455847 GTATTAGTTACGTGGTTAACATCTAGG 57.544 37.037 8.10 0.00 0.00 3.02
2517 2566 6.860080 AGATGTTGATGAATAAGCTTTGTGG 58.140 36.000 3.20 0.00 0.00 4.17
2578 2635 7.228706 GGCTAGGCTTAATGCTTCACTAAAATA 59.771 37.037 9.46 0.00 42.39 1.40
2595 2652 3.244840 GGATGATTCTCATGGCTAGGCTT 60.245 47.826 18.18 8.48 37.20 4.35
2596 2653 2.305343 GGATGATTCTCATGGCTAGGCT 59.695 50.000 18.18 0.00 37.20 4.58
2600 2657 2.700371 ACGTGGATGATTCTCATGGCTA 59.300 45.455 0.00 0.00 37.20 3.93
2606 2663 3.885724 TTGCTACGTGGATGATTCTCA 57.114 42.857 1.81 0.00 0.00 3.27
2620 2677 9.229784 CATAGATTGTGTGAATCAAATTGCTAC 57.770 33.333 0.00 0.00 0.00 3.58
2760 3401 8.243961 TCAGACACCAAGGAATTTTGAAAATA 57.756 30.769 3.26 0.00 0.00 1.40
2767 3408 5.930837 TGTTTCAGACACCAAGGAATTTT 57.069 34.783 0.00 0.00 32.00 1.82
2768 3409 5.835280 AGATGTTTCAGACACCAAGGAATTT 59.165 36.000 0.00 0.00 42.04 1.82
2887 3529 2.172679 TGAGTTACGTACATGCTCCCA 58.827 47.619 0.00 0.00 0.00 4.37
2908 3550 0.034670 GGCCTTCATCTTGCTCACCT 60.035 55.000 0.00 0.00 0.00 4.00
2991 3634 1.844296 ATCCCACCCCCTCCTTACCA 61.844 60.000 0.00 0.00 0.00 3.25
2994 3637 0.626277 CCAATCCCACCCCCTCCTTA 60.626 60.000 0.00 0.00 0.00 2.69
3018 3661 5.829924 CCTAAATGCTGTTCCAATCCTGTAT 59.170 40.000 0.00 0.00 0.00 2.29
3027 3670 5.221843 ACAGTCTAACCTAAATGCTGTTCCA 60.222 40.000 0.00 0.00 32.62 3.53
3028 3671 5.246307 ACAGTCTAACCTAAATGCTGTTCC 58.754 41.667 0.00 0.00 32.62 3.62
3042 3685 3.193056 AGGCGTTCCTCTAACAGTCTAAC 59.807 47.826 0.00 0.00 38.72 2.34
3043 3686 3.192844 CAGGCGTTCCTCTAACAGTCTAA 59.807 47.826 0.00 0.00 41.93 2.10
3044 3687 2.753452 CAGGCGTTCCTCTAACAGTCTA 59.247 50.000 0.00 0.00 41.93 2.59
3045 3688 1.546476 CAGGCGTTCCTCTAACAGTCT 59.454 52.381 0.00 0.00 41.93 3.24
3046 3689 1.404315 CCAGGCGTTCCTCTAACAGTC 60.404 57.143 0.00 0.00 41.93 3.51
3047 3690 0.608640 CCAGGCGTTCCTCTAACAGT 59.391 55.000 0.00 0.00 41.93 3.55
3048 3691 0.608640 ACCAGGCGTTCCTCTAACAG 59.391 55.000 0.00 0.00 41.93 3.16
3049 3692 0.606604 GACCAGGCGTTCCTCTAACA 59.393 55.000 0.00 0.00 41.93 2.41
3193 3836 0.826062 CCCAACCCATCTTGCAATCC 59.174 55.000 0.00 0.00 0.00 3.01
3196 3839 1.559368 CATCCCAACCCATCTTGCAA 58.441 50.000 0.00 0.00 0.00 4.08
3197 3840 0.324552 CCATCCCAACCCATCTTGCA 60.325 55.000 0.00 0.00 0.00 4.08
3209 3852 3.083349 CCGCAGTCCTCCATCCCA 61.083 66.667 0.00 0.00 0.00 4.37
3245 4238 3.418047 GCCTAGCCAGGAAACTACAAAA 58.582 45.455 0.85 0.00 45.91 2.44
3290 4283 9.528018 CAGAATATAAGTTTCTCTTCTCAGGTC 57.472 37.037 0.00 0.00 37.56 3.85
3313 4306 4.287845 AGGATGCTCACCATATAATGCAGA 59.712 41.667 0.00 0.00 33.29 4.26
3391 4384 8.562892 AGTCACTTGATTCAAGAACATTAACAG 58.437 33.333 28.60 3.11 43.42 3.16
3395 4388 7.714813 TGTCAGTCACTTGATTCAAGAACATTA 59.285 33.333 28.60 13.82 43.42 1.90
3417 4452 4.764308 TGCAAGTTATTGTAGGCATTGTCA 59.236 37.500 0.00 0.00 38.76 3.58
3425 4460 3.505680 TGGCAGTTGCAAGTTATTGTAGG 59.494 43.478 3.38 0.00 44.36 3.18
3492 4527 5.927030 ACGACAACAATTACATGACATGAC 58.073 37.500 22.19 0.00 0.00 3.06
3494 4529 6.247903 GGTACGACAACAATTACATGACATG 58.752 40.000 14.02 14.02 0.00 3.21
3495 4530 6.417191 GGTACGACAACAATTACATGACAT 57.583 37.500 0.00 0.00 0.00 3.06
3547 4583 2.124411 GATGGTTAGTCCTGGGCCTAA 58.876 52.381 4.53 0.00 37.07 2.69
3591 4627 7.907389 AGAATTGTTCACATGAGTTCCTAGTA 58.093 34.615 0.00 0.00 0.00 1.82
3630 4668 9.843334 AAAGAAACATACAGTAAAACAAAACGA 57.157 25.926 0.00 0.00 0.00 3.85
3677 4716 4.711399 TCAAGATTCAGGGCTCATACATG 58.289 43.478 0.00 0.00 0.00 3.21
3679 4718 4.842531 TTCAAGATTCAGGGCTCATACA 57.157 40.909 0.00 0.00 0.00 2.29
3685 4724 3.726557 TGACATTCAAGATTCAGGGCT 57.273 42.857 0.00 0.00 0.00 5.19
3691 4730 7.875971 ACCTGTAAAGTTGACATTCAAGATTC 58.124 34.615 0.00 0.00 37.00 2.52
3807 4846 6.128526 GCCATTAAGCTAGATTAAGTTAGGCG 60.129 42.308 22.05 7.83 30.16 5.52
3833 4872 5.832539 AGCCTGTATAATACCAGAAGCAT 57.167 39.130 0.00 0.00 0.00 3.79
3839 4878 8.450578 TCAATTTCAAGCCTGTATAATACCAG 57.549 34.615 0.00 0.00 0.00 4.00
3856 4895 4.151883 CCTTGTCCTTTCCCTCAATTTCA 58.848 43.478 0.00 0.00 0.00 2.69
3910 4949 0.469917 AGCCTCCCGTATCAACATGG 59.530 55.000 0.00 0.00 0.00 3.66
4272 6414 8.405531 GGTAATAGCTGAATCTATTGCAACAAA 58.594 33.333 0.00 0.00 40.85 2.83
4309 6453 8.560374 GCCTGAATCCATAGAAAATACTGTAAC 58.440 37.037 0.00 0.00 0.00 2.50
4337 6481 7.940688 TCACATCTATGAAGGCAAATGTCATAT 59.059 33.333 0.00 0.00 34.58 1.78
4634 6822 2.355363 GAGCGCGTGTGTGGTGTA 60.355 61.111 8.43 0.00 36.25 2.90
4640 6828 3.043713 CCATGTGAGCGCGTGTGT 61.044 61.111 8.43 0.00 0.00 3.72
4642 6830 3.043713 CACCATGTGAGCGCGTGT 61.044 61.111 8.43 0.00 35.23 4.49
4643 6831 4.450122 GCACCATGTGAGCGCGTG 62.450 66.667 8.43 3.02 35.23 5.34
4644 6832 4.986645 TGCACCATGTGAGCGCGT 62.987 61.111 8.43 0.00 35.23 6.01
4646 6834 2.101575 CATGCACCATGTGAGCGC 59.898 61.111 0.00 0.00 37.12 5.92
4648 6836 0.734889 GTACCATGCACCATGTGAGC 59.265 55.000 0.00 0.00 39.94 4.26
4650 6838 0.392327 CCGTACCATGCACCATGTGA 60.392 55.000 0.00 0.00 39.94 3.58
4652 6840 1.748879 GCCGTACCATGCACCATGT 60.749 57.895 0.00 0.00 39.94 3.21
4654 6842 1.153168 GAGCCGTACCATGCACCAT 60.153 57.895 0.00 0.00 0.00 3.55
4655 6843 2.267642 GAGCCGTACCATGCACCA 59.732 61.111 0.00 0.00 0.00 4.17
4656 6844 1.815421 CAGAGCCGTACCATGCACC 60.815 63.158 0.00 0.00 0.00 5.01
4657 6845 1.079127 ACAGAGCCGTACCATGCAC 60.079 57.895 0.00 0.00 0.00 4.57
4658 6846 1.218047 GACAGAGCCGTACCATGCA 59.782 57.895 0.00 0.00 0.00 3.96
4725 6913 4.161565 AGTCACACAAAGTCTTACTGTCCA 59.838 41.667 0.00 0.00 0.00 4.02
4820 7009 3.994392 TCTCTTTGCATCGTAACCAGTTC 59.006 43.478 0.00 0.00 0.00 3.01
4887 7076 1.345415 CCTTTTGTTTCCTGCCAGCAT 59.655 47.619 0.00 0.00 0.00 3.79
4893 7082 3.826729 AGTGTATCCCTTTTGTTTCCTGC 59.173 43.478 0.00 0.00 0.00 4.85
4908 7097 8.171840 GTCATTCACTTTCTGCTTTAGTGTATC 58.828 37.037 0.00 0.00 40.08 2.24
4927 7116 4.160065 CCCTATGGTGCAAATTGTCATTCA 59.840 41.667 0.00 0.00 0.00 2.57
4935 7124 3.205056 TCTGATCCCCTATGGTGCAAATT 59.795 43.478 0.00 0.00 34.77 1.82
4938 7127 1.770658 CTCTGATCCCCTATGGTGCAA 59.229 52.381 0.00 0.00 34.77 4.08
4952 7149 1.504912 AGTATGTGCCTGCCTCTGAT 58.495 50.000 0.00 0.00 0.00 2.90
5020 7217 0.934496 TTCAACTCGCTGTCAAACCG 59.066 50.000 0.00 0.00 0.00 4.44
5043 7240 7.979444 AAACATAAGGACATCGAGAAAAGAA 57.021 32.000 0.00 0.00 0.00 2.52
5045 7242 7.806690 TGAAAACATAAGGACATCGAGAAAAG 58.193 34.615 0.00 0.00 0.00 2.27
5052 7249 8.196802 TCAACTATGAAAACATAAGGACATCG 57.803 34.615 0.00 0.00 30.99 3.84
5075 7272 2.123018 AGGGATGCAGGATACCATCA 57.877 50.000 5.85 0.00 37.56 3.07
5082 7279 3.837146 CACTACAGATAGGGATGCAGGAT 59.163 47.826 0.00 0.00 33.05 3.24
5089 7286 4.170251 AGGGTACACACTACAGATAGGGAT 59.830 45.833 0.00 0.00 35.14 3.85
5090 7287 3.530564 AGGGTACACACTACAGATAGGGA 59.469 47.826 0.00 0.00 35.14 4.20
5091 7288 3.912248 AGGGTACACACTACAGATAGGG 58.088 50.000 0.00 0.00 37.88 3.53
5092 7289 7.005296 AGATAAGGGTACACACTACAGATAGG 58.995 42.308 0.00 0.00 32.08 2.57
5093 7290 7.720074 TCAGATAAGGGTACACACTACAGATAG 59.280 40.741 0.00 0.00 34.25 2.08
5095 7292 6.432581 TCAGATAAGGGTACACACTACAGAT 58.567 40.000 0.00 0.00 0.00 2.90
5096 7293 5.823312 TCAGATAAGGGTACACACTACAGA 58.177 41.667 0.00 0.00 0.00 3.41
5097 7294 6.716934 ATCAGATAAGGGTACACACTACAG 57.283 41.667 0.00 0.00 0.00 2.74
5098 7295 7.038587 ACAAATCAGATAAGGGTACACACTACA 60.039 37.037 0.00 0.00 0.00 2.74
5099 7296 7.328737 ACAAATCAGATAAGGGTACACACTAC 58.671 38.462 0.00 0.00 0.00 2.73
5117 7341 7.065324 CGGAGGTAGCAAAACTATTACAAATCA 59.935 37.037 0.00 0.00 32.15 2.57
5169 7397 4.876107 TCGAGAGTCAAAGGCAAATAATCC 59.124 41.667 0.00 0.00 0.00 3.01
5170 7398 6.422776 TTCGAGAGTCAAAGGCAAATAATC 57.577 37.500 0.00 0.00 0.00 1.75
5199 7427 3.982576 ATTTATAAAGCGGGGCGAAAG 57.017 42.857 3.94 0.00 0.00 2.62
5200 7428 5.823353 CTTTATTTATAAAGCGGGGCGAAA 58.177 37.500 8.78 0.00 41.69 3.46
5201 7429 5.427036 CTTTATTTATAAAGCGGGGCGAA 57.573 39.130 8.78 0.00 41.69 4.70
5215 7443 8.564574 GGATTGTATGGATCGTTGCTTTATTTA 58.435 33.333 0.00 0.00 0.00 1.40
5216 7444 7.068103 TGGATTGTATGGATCGTTGCTTTATTT 59.932 33.333 0.00 0.00 0.00 1.40
5217 7445 6.545666 TGGATTGTATGGATCGTTGCTTTATT 59.454 34.615 0.00 0.00 0.00 1.40
5218 7446 6.061441 TGGATTGTATGGATCGTTGCTTTAT 58.939 36.000 0.00 0.00 0.00 1.40
5219 7447 5.432645 TGGATTGTATGGATCGTTGCTTTA 58.567 37.500 0.00 0.00 0.00 1.85
5220 7448 4.269183 TGGATTGTATGGATCGTTGCTTT 58.731 39.130 0.00 0.00 0.00 3.51
5221 7449 3.884895 TGGATTGTATGGATCGTTGCTT 58.115 40.909 0.00 0.00 0.00 3.91
5222 7450 3.558931 TGGATTGTATGGATCGTTGCT 57.441 42.857 0.00 0.00 0.00 3.91
5223 7451 3.627577 ACTTGGATTGTATGGATCGTTGC 59.372 43.478 0.00 0.00 0.00 4.17
5224 7452 5.353956 TGAACTTGGATTGTATGGATCGTTG 59.646 40.000 0.00 0.00 0.00 4.10
5225 7453 5.496556 TGAACTTGGATTGTATGGATCGTT 58.503 37.500 0.00 0.00 0.00 3.85
5226 7454 5.097742 TGAACTTGGATTGTATGGATCGT 57.902 39.130 0.00 0.00 0.00 3.73
5227 7455 5.586243 AGTTGAACTTGGATTGTATGGATCG 59.414 40.000 0.00 0.00 0.00 3.69
5228 7456 6.678900 GCAGTTGAACTTGGATTGTATGGATC 60.679 42.308 0.00 0.00 0.00 3.36
5229 7457 5.126061 GCAGTTGAACTTGGATTGTATGGAT 59.874 40.000 0.00 0.00 0.00 3.41
5230 7458 4.458989 GCAGTTGAACTTGGATTGTATGGA 59.541 41.667 0.00 0.00 0.00 3.41
5231 7459 4.218200 TGCAGTTGAACTTGGATTGTATGG 59.782 41.667 0.00 0.00 0.00 2.74
5232 7460 5.375417 TGCAGTTGAACTTGGATTGTATG 57.625 39.130 0.00 0.00 0.00 2.39
5233 7461 6.209192 TCAATGCAGTTGAACTTGGATTGTAT 59.791 34.615 25.06 8.80 43.64 2.29
5234 7462 5.534278 TCAATGCAGTTGAACTTGGATTGTA 59.466 36.000 25.06 16.63 43.64 2.41
5235 7463 4.341806 TCAATGCAGTTGAACTTGGATTGT 59.658 37.500 25.06 5.44 43.64 2.71
5236 7464 4.873817 TCAATGCAGTTGAACTTGGATTG 58.126 39.130 22.74 22.74 43.64 2.67
5237 7465 4.560108 GCTCAATGCAGTTGAACTTGGATT 60.560 41.667 0.00 2.18 45.74 3.01
5238 7466 3.057033 GCTCAATGCAGTTGAACTTGGAT 60.057 43.478 0.00 0.00 45.74 3.41
5239 7467 2.294233 GCTCAATGCAGTTGAACTTGGA 59.706 45.455 0.00 0.00 45.74 3.53
5240 7468 2.669364 GCTCAATGCAGTTGAACTTGG 58.331 47.619 0.00 0.00 45.74 3.61
5252 7480 0.734889 AGCCGTTGTATGCTCAATGC 59.265 50.000 0.00 0.00 43.25 3.56
5253 7481 1.064505 CCAGCCGTTGTATGCTCAATG 59.935 52.381 0.00 0.00 35.12 2.82
5254 7482 1.382522 CCAGCCGTTGTATGCTCAAT 58.617 50.000 0.00 0.00 35.12 2.57
5255 7483 0.676466 CCCAGCCGTTGTATGCTCAA 60.676 55.000 0.00 0.00 35.12 3.02
5256 7484 1.078497 CCCAGCCGTTGTATGCTCA 60.078 57.895 0.00 0.00 35.12 4.26
5257 7485 1.819632 CCCCAGCCGTTGTATGCTC 60.820 63.158 0.00 0.00 35.12 4.26
5258 7486 2.272146 CCCCAGCCGTTGTATGCT 59.728 61.111 0.00 0.00 38.67 3.79
5259 7487 3.518068 GCCCCAGCCGTTGTATGC 61.518 66.667 0.00 0.00 0.00 3.14
5270 7498 2.283388 ATTGTGCTGTGGCCCCAG 60.283 61.111 11.40 11.40 37.74 4.45
5271 7499 2.283101 GATTGTGCTGTGGCCCCA 60.283 61.111 0.00 0.00 37.74 4.96
5272 7500 1.880819 CTTGATTGTGCTGTGGCCCC 61.881 60.000 0.00 0.00 37.74 5.80
5273 7501 1.588082 CTTGATTGTGCTGTGGCCC 59.412 57.895 0.00 0.00 37.74 5.80
5274 7502 1.080298 GCTTGATTGTGCTGTGGCC 60.080 57.895 0.00 0.00 37.74 5.36
5275 7503 1.080298 GGCTTGATTGTGCTGTGGC 60.080 57.895 0.00 0.00 39.26 5.01
5276 7504 1.180456 TGGGCTTGATTGTGCTGTGG 61.180 55.000 0.00 0.00 0.00 4.17
5277 7505 0.675083 TTGGGCTTGATTGTGCTGTG 59.325 50.000 0.00 0.00 0.00 3.66
5278 7506 1.412079 TTTGGGCTTGATTGTGCTGT 58.588 45.000 0.00 0.00 0.00 4.40
5279 7507 2.529780 TTTTGGGCTTGATTGTGCTG 57.470 45.000 0.00 0.00 0.00 4.41
5304 7532 9.758651 GGTGGCTTTTTCTTTCTATTTCTTTTA 57.241 29.630 0.00 0.00 0.00 1.52
5305 7533 8.486210 AGGTGGCTTTTTCTTTCTATTTCTTTT 58.514 29.630 0.00 0.00 0.00 2.27
5306 7534 8.023021 AGGTGGCTTTTTCTTTCTATTTCTTT 57.977 30.769 0.00 0.00 0.00 2.52
5307 7535 7.603180 AGGTGGCTTTTTCTTTCTATTTCTT 57.397 32.000 0.00 0.00 0.00 2.52
5308 7536 7.945109 ACTAGGTGGCTTTTTCTTTCTATTTCT 59.055 33.333 0.00 0.00 0.00 2.52
5309 7537 8.023706 CACTAGGTGGCTTTTTCTTTCTATTTC 58.976 37.037 0.00 0.00 0.00 2.17
5310 7538 7.886338 CACTAGGTGGCTTTTTCTTTCTATTT 58.114 34.615 0.00 0.00 0.00 1.40
5311 7539 7.454260 CACTAGGTGGCTTTTTCTTTCTATT 57.546 36.000 0.00 0.00 0.00 1.73
5328 7556 1.324740 TTATGCGGACGCCACTAGGT 61.325 55.000 14.61 0.00 41.09 3.08
5329 7557 0.874607 GTTATGCGGACGCCACTAGG 60.875 60.000 14.61 0.00 41.09 3.02
5330 7558 1.206745 CGTTATGCGGACGCCACTAG 61.207 60.000 14.61 0.00 41.09 2.57
5331 7559 1.226745 CGTTATGCGGACGCCACTA 60.227 57.895 14.61 0.73 41.09 2.74
5332 7560 2.508439 CGTTATGCGGACGCCACT 60.508 61.111 14.61 1.70 41.09 4.00
5341 7569 0.248336 TCTCGTAGTGCCGTTATGCG 60.248 55.000 0.00 0.00 40.95 4.73
5342 7570 1.917273 TTCTCGTAGTGCCGTTATGC 58.083 50.000 0.00 0.00 0.00 3.14
5343 7571 3.766151 TCTTTCTCGTAGTGCCGTTATG 58.234 45.455 0.00 0.00 0.00 1.90
5344 7572 4.650754 ATCTTTCTCGTAGTGCCGTTAT 57.349 40.909 0.00 0.00 0.00 1.89
5345 7573 4.637534 ACTATCTTTCTCGTAGTGCCGTTA 59.362 41.667 0.00 0.00 0.00 3.18
5346 7574 3.442977 ACTATCTTTCTCGTAGTGCCGTT 59.557 43.478 0.00 0.00 0.00 4.44
5347 7575 3.015327 ACTATCTTTCTCGTAGTGCCGT 58.985 45.455 0.00 0.00 0.00 5.68
5348 7576 3.619729 GACTATCTTTCTCGTAGTGCCG 58.380 50.000 0.00 0.00 0.00 5.69
5349 7577 3.311871 TCGACTATCTTTCTCGTAGTGCC 59.688 47.826 0.00 0.00 0.00 5.01
5350 7578 4.273274 GTCGACTATCTTTCTCGTAGTGC 58.727 47.826 8.70 0.00 0.00 4.40
5351 7579 4.507134 CGTCGACTATCTTTCTCGTAGTG 58.493 47.826 14.70 0.00 0.00 2.74
5352 7580 3.001127 GCGTCGACTATCTTTCTCGTAGT 59.999 47.826 14.70 0.00 0.00 2.73
5353 7581 3.001026 TGCGTCGACTATCTTTCTCGTAG 59.999 47.826 14.70 0.00 0.00 3.51
5354 7582 2.931969 TGCGTCGACTATCTTTCTCGTA 59.068 45.455 14.70 0.00 0.00 3.43
5355 7583 1.736126 TGCGTCGACTATCTTTCTCGT 59.264 47.619 14.70 0.00 0.00 4.18
5356 7584 2.102633 GTGCGTCGACTATCTTTCTCG 58.897 52.381 14.70 0.00 0.00 4.04
5357 7585 2.452105 GGTGCGTCGACTATCTTTCTC 58.548 52.381 14.70 0.00 0.00 2.87
5358 7586 1.202154 CGGTGCGTCGACTATCTTTCT 60.202 52.381 14.70 0.00 0.00 2.52
5359 7587 1.189403 CGGTGCGTCGACTATCTTTC 58.811 55.000 14.70 0.00 0.00 2.62
5360 7588 0.806868 TCGGTGCGTCGACTATCTTT 59.193 50.000 14.70 0.00 33.92 2.52
5361 7589 0.806868 TTCGGTGCGTCGACTATCTT 59.193 50.000 14.70 0.00 39.01 2.40
5362 7590 0.377554 CTTCGGTGCGTCGACTATCT 59.622 55.000 14.70 0.00 39.01 1.98
5363 7591 1.201098 GCTTCGGTGCGTCGACTATC 61.201 60.000 14.70 1.85 39.01 2.08
5364 7592 1.226603 GCTTCGGTGCGTCGACTAT 60.227 57.895 14.70 0.00 39.01 2.12
5365 7593 2.177531 GCTTCGGTGCGTCGACTA 59.822 61.111 14.70 0.00 39.01 2.59
5366 7594 4.719369 GGCTTCGGTGCGTCGACT 62.719 66.667 14.70 0.00 39.01 4.18
5368 7596 4.717629 CTGGCTTCGGTGCGTCGA 62.718 66.667 0.00 0.00 37.38 4.20
5369 7597 4.717629 TCTGGCTTCGGTGCGTCG 62.718 66.667 0.00 0.00 0.00 5.12
5370 7598 2.357034 TTCTGGCTTCGGTGCGTC 60.357 61.111 0.00 0.00 0.00 5.19
5371 7599 2.357517 CTTCTGGCTTCGGTGCGT 60.358 61.111 0.00 0.00 0.00 5.24
5372 7600 3.793144 GCTTCTGGCTTCGGTGCG 61.793 66.667 0.00 0.00 38.06 5.34
5373 7601 3.793144 CGCTTCTGGCTTCGGTGC 61.793 66.667 0.00 0.00 39.13 5.01
5374 7602 3.793144 GCGCTTCTGGCTTCGGTG 61.793 66.667 0.00 0.00 39.13 4.94
5375 7603 3.612247 ATGCGCTTCTGGCTTCGGT 62.612 57.895 9.73 0.00 39.13 4.69
5376 7604 2.817423 GATGCGCTTCTGGCTTCGG 61.817 63.158 15.51 0.00 39.13 4.30
5377 7605 2.705826 GATGCGCTTCTGGCTTCG 59.294 61.111 15.51 0.00 39.13 3.79
5378 7606 1.099879 ATGGATGCGCTTCTGGCTTC 61.100 55.000 21.05 5.76 39.13 3.86
5379 7607 1.077212 ATGGATGCGCTTCTGGCTT 60.077 52.632 21.05 2.62 39.13 4.35
5380 7608 1.525535 GATGGATGCGCTTCTGGCT 60.526 57.895 21.05 5.43 39.13 4.75
5381 7609 1.170919 ATGATGGATGCGCTTCTGGC 61.171 55.000 21.05 11.61 37.64 4.85
5382 7610 0.873054 GATGATGGATGCGCTTCTGG 59.127 55.000 21.05 0.00 0.00 3.86
5383 7611 1.589803 TGATGATGGATGCGCTTCTG 58.410 50.000 21.05 0.00 0.00 3.02
5384 7612 2.336945 TTGATGATGGATGCGCTTCT 57.663 45.000 21.05 4.08 0.00 2.85
5385 7613 2.095364 GGATTGATGATGGATGCGCTTC 60.095 50.000 14.55 14.55 0.00 3.86
5386 7614 1.884579 GGATTGATGATGGATGCGCTT 59.115 47.619 9.73 0.55 0.00 4.68
5387 7615 1.202842 TGGATTGATGATGGATGCGCT 60.203 47.619 9.73 0.00 0.00 5.92
5388 7616 1.241165 TGGATTGATGATGGATGCGC 58.759 50.000 0.00 0.00 0.00 6.09
5389 7617 2.882761 ACTTGGATTGATGATGGATGCG 59.117 45.455 0.00 0.00 0.00 4.73
5390 7618 3.058432 CGACTTGGATTGATGATGGATGC 60.058 47.826 0.00 0.00 0.00 3.91
5391 7619 3.501062 CCGACTTGGATTGATGATGGATG 59.499 47.826 0.00 0.00 42.00 3.51
5392 7620 3.137176 ACCGACTTGGATTGATGATGGAT 59.863 43.478 0.00 0.00 42.00 3.41
5393 7621 2.505407 ACCGACTTGGATTGATGATGGA 59.495 45.455 0.00 0.00 42.00 3.41
5394 7622 2.874701 GACCGACTTGGATTGATGATGG 59.125 50.000 0.00 0.00 42.00 3.51
5395 7623 3.310774 GTGACCGACTTGGATTGATGATG 59.689 47.826 0.00 0.00 42.00 3.07
5396 7624 3.535561 GTGACCGACTTGGATTGATGAT 58.464 45.455 0.00 0.00 42.00 2.45
5397 7625 2.673893 CGTGACCGACTTGGATTGATGA 60.674 50.000 0.00 0.00 42.00 2.92
5398 7626 1.660607 CGTGACCGACTTGGATTGATG 59.339 52.381 0.00 0.00 42.00 3.07
5399 7627 1.548719 TCGTGACCGACTTGGATTGAT 59.451 47.619 0.00 0.00 42.00 2.57
5400 7628 0.963225 TCGTGACCGACTTGGATTGA 59.037 50.000 0.00 0.00 42.00 2.57
5401 7629 3.507597 TCGTGACCGACTTGGATTG 57.492 52.632 0.00 0.00 42.00 2.67
5411 7639 3.545481 GCAGCGTGATCGTGACCG 61.545 66.667 0.00 0.00 39.49 4.79
5412 7640 3.188786 GGCAGCGTGATCGTGACC 61.189 66.667 0.00 0.00 39.49 4.02
5413 7641 2.125912 AGGCAGCGTGATCGTGAC 60.126 61.111 0.00 0.00 39.49 3.67
5414 7642 2.181777 GAGGCAGCGTGATCGTGA 59.818 61.111 0.00 0.00 39.49 4.35
5415 7643 3.250323 CGAGGCAGCGTGATCGTG 61.250 66.667 0.00 0.00 39.49 4.35
5416 7644 3.402691 CTCGAGGCAGCGTGATCGT 62.403 63.158 3.91 0.00 39.49 3.73
5417 7645 2.653448 CTCGAGGCAGCGTGATCG 60.653 66.667 3.91 0.00 40.37 3.69
5418 7646 1.299014 CTCTCGAGGCAGCGTGATC 60.299 63.158 13.56 0.00 33.96 2.92
5419 7647 2.804167 CTCTCGAGGCAGCGTGAT 59.196 61.111 13.56 0.00 33.96 3.06
5420 7648 4.121669 GCTCTCGAGGCAGCGTGA 62.122 66.667 13.56 4.88 33.45 4.35
5421 7649 4.426112 TGCTCTCGAGGCAGCGTG 62.426 66.667 20.28 2.54 38.59 5.34
5426 7654 4.074526 GCACCTGCTCTCGAGGCA 62.075 66.667 21.98 21.98 38.21 4.75
5427 7655 4.828925 GGCACCTGCTCTCGAGGC 62.829 72.222 13.56 15.15 41.70 4.70
5428 7656 4.504916 CGGCACCTGCTCTCGAGG 62.505 72.222 13.56 4.50 41.70 4.63
5429 7657 4.504916 CCGGCACCTGCTCTCGAG 62.505 72.222 5.93 5.93 41.70 4.04
5441 7669 4.577677 TTTCCTGCAGCACCGGCA 62.578 61.111 8.66 0.00 44.61 5.69
5442 7670 3.741476 CTTTCCTGCAGCACCGGC 61.741 66.667 8.66 0.00 41.61 6.13
5443 7671 3.741476 GCTTTCCTGCAGCACCGG 61.741 66.667 8.66 0.00 37.22 5.28
5444 7672 2.979676 TGCTTTCCTGCAGCACCG 60.980 61.111 8.66 0.00 42.49 4.94
5447 7675 0.467844 TTCCTTGCTTTCCTGCAGCA 60.468 50.000 8.66 0.00 45.73 4.41
5448 7676 0.893447 ATTCCTTGCTTTCCTGCAGC 59.107 50.000 8.66 0.00 44.27 5.25
5449 7677 3.006110 TCAAATTCCTTGCTTTCCTGCAG 59.994 43.478 6.78 6.78 44.27 4.41
5450 7678 2.964464 TCAAATTCCTTGCTTTCCTGCA 59.036 40.909 0.00 0.00 41.65 4.41
5451 7679 3.665745 TCAAATTCCTTGCTTTCCTGC 57.334 42.857 0.00 0.00 34.76 4.85
5452 7680 5.458041 TCTTCAAATTCCTTGCTTTCCTG 57.542 39.130 0.00 0.00 34.76 3.86
5453 7681 4.525874 CCTCTTCAAATTCCTTGCTTTCCT 59.474 41.667 0.00 0.00 34.76 3.36
5454 7682 4.322273 CCCTCTTCAAATTCCTTGCTTTCC 60.322 45.833 0.00 0.00 34.76 3.13
5455 7683 4.524328 TCCCTCTTCAAATTCCTTGCTTTC 59.476 41.667 0.00 0.00 34.76 2.62
5456 7684 4.482990 TCCCTCTTCAAATTCCTTGCTTT 58.517 39.130 0.00 0.00 34.76 3.51
5457 7685 4.085009 CTCCCTCTTCAAATTCCTTGCTT 58.915 43.478 0.00 0.00 34.76 3.91
5458 7686 3.075134 ACTCCCTCTTCAAATTCCTTGCT 59.925 43.478 0.00 0.00 34.76 3.91
5459 7687 3.425659 ACTCCCTCTTCAAATTCCTTGC 58.574 45.455 0.00 0.00 34.76 4.01
5460 7688 4.457257 GTGACTCCCTCTTCAAATTCCTTG 59.543 45.833 0.00 0.00 36.25 3.61
5461 7689 4.104738 TGTGACTCCCTCTTCAAATTCCTT 59.895 41.667 0.00 0.00 0.00 3.36
5462 7690 3.652869 TGTGACTCCCTCTTCAAATTCCT 59.347 43.478 0.00 0.00 0.00 3.36
5463 7691 3.753797 GTGTGACTCCCTCTTCAAATTCC 59.246 47.826 0.00 0.00 0.00 3.01
5464 7692 3.433615 CGTGTGACTCCCTCTTCAAATTC 59.566 47.826 0.00 0.00 0.00 2.17
5465 7693 3.403038 CGTGTGACTCCCTCTTCAAATT 58.597 45.455 0.00 0.00 0.00 1.82
5466 7694 2.872038 GCGTGTGACTCCCTCTTCAAAT 60.872 50.000 0.00 0.00 0.00 2.32
5467 7695 1.540363 GCGTGTGACTCCCTCTTCAAA 60.540 52.381 0.00 0.00 0.00 2.69
5468 7696 0.033504 GCGTGTGACTCCCTCTTCAA 59.966 55.000 0.00 0.00 0.00 2.69
5469 7697 1.666011 GCGTGTGACTCCCTCTTCA 59.334 57.895 0.00 0.00 0.00 3.02
5470 7698 1.079750 GGCGTGTGACTCCCTCTTC 60.080 63.158 0.00 0.00 0.00 2.87
5471 7699 1.122019 AAGGCGTGTGACTCCCTCTT 61.122 55.000 0.00 0.00 28.00 2.85
5472 7700 1.534235 AAGGCGTGTGACTCCCTCT 60.534 57.895 0.00 0.00 28.00 3.69
5473 7701 3.060866 AAGGCGTGTGACTCCCTC 58.939 61.111 0.00 0.00 28.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.