Multiple sequence alignment - TraesCS7D01G158900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G158900 chr7D 100.000 2741 0 0 1 2741 108084490 108087230 0.000000e+00 5062.0
1 TraesCS7D01G158900 chr7D 91.169 838 56 7 703 1531 108412134 108412962 0.000000e+00 1122.0
2 TraesCS7D01G158900 chr7D 91.768 413 34 0 1104 1516 91699845 91699433 2.370000e-160 575.0
3 TraesCS7D01G158900 chr7D 89.627 241 18 6 1557 1795 108413313 108413548 1.600000e-77 300.0
4 TraesCS7D01G158900 chr7D 78.544 522 63 21 1 480 108411428 108411942 5.740000e-77 298.0
5 TraesCS7D01G158900 chr7D 90.083 121 8 2 1527 1646 108413189 108413306 1.310000e-33 154.0
6 TraesCS7D01G158900 chr7D 87.500 88 10 1 1960 2047 108414112 108414198 1.740000e-17 100.0
7 TraesCS7D01G158900 chr7B 88.889 1350 96 23 703 2045 66978324 66979626 0.000000e+00 1613.0
8 TraesCS7D01G158900 chr7B 86.660 967 78 27 769 1729 67807862 67808783 0.000000e+00 1024.0
9 TraesCS7D01G158900 chr7B 92.010 413 33 0 1104 1516 63934978 63935390 5.090000e-162 580.0
10 TraesCS7D01G158900 chr7B 84.746 177 22 4 2569 2741 742919318 742919493 3.630000e-39 172.0
11 TraesCS7D01G158900 chr7B 93.023 43 3 0 2443 2485 66979619 66979661 2.280000e-06 63.9
12 TraesCS7D01G158900 chr7A 88.738 1101 73 24 703 1795 113370637 113371694 0.000000e+00 1299.0
13 TraesCS7D01G158900 chr7A 91.525 413 35 0 1104 1516 93260965 93260553 1.100000e-158 569.0
14 TraesCS7D01G158900 chr1B 91.546 414 33 2 1104 1516 434409084 434409496 1.100000e-158 569.0
15 TraesCS7D01G158900 chr1B 91.304 414 34 2 1104 1516 434423195 434422783 5.120000e-157 564.0
16 TraesCS7D01G158900 chr1D 87.530 417 33 7 2048 2446 468569320 468568905 5.350000e-127 464.0
17 TraesCS7D01G158900 chr2D 87.229 415 33 7 2048 2443 8337829 8338242 3.220000e-124 455.0
18 TraesCS7D01G158900 chr2D 86.019 422 31 16 2044 2443 639826975 639827390 7.010000e-116 427.0
19 TraesCS7D01G158900 chr2D 84.726 419 43 12 2049 2449 434339585 434339170 1.530000e-107 399.0
20 TraesCS7D01G158900 chr2D 84.450 418 45 13 2048 2446 16233304 16233720 7.110000e-106 394.0
21 TraesCS7D01G158900 chr2D 84.382 429 37 17 2044 2443 641973177 641973604 7.110000e-106 394.0
22 TraesCS7D01G158900 chr2D 82.944 428 44 17 2044 2443 597960657 597961083 2.600000e-95 359.0
23 TraesCS7D01G158900 chr5D 84.870 423 47 10 2050 2458 162416421 162416002 7.060000e-111 411.0
24 TraesCS7D01G158900 chr6D 84.977 426 33 11 2047 2443 268069639 268069216 1.180000e-108 403.0
25 TraesCS7D01G158900 chr4A 83.710 442 42 11 2040 2452 13062416 13061976 9.200000e-105 390.0
26 TraesCS7D01G158900 chr2B 84.262 413 46 6 2047 2440 212179506 212179918 4.280000e-103 385.0
27 TraesCS7D01G158900 chr4D 82.857 420 51 13 2039 2440 493333619 493334035 9.330000e-95 357.0
28 TraesCS7D01G158900 chr5A 86.039 308 34 5 2146 2444 36362099 36362406 3.410000e-84 322.0
29 TraesCS7D01G158900 chr6A 78.431 408 63 14 2052 2441 584248101 584247701 2.730000e-60 243.0
30 TraesCS7D01G158900 chr6A 85.311 177 21 4 2569 2741 84436770 84436945 7.800000e-41 178.0
31 TraesCS7D01G158900 chr6A 84.746 177 22 4 2569 2741 608880619 608880444 3.630000e-39 172.0
32 TraesCS7D01G158900 chr5B 85.795 176 21 3 2569 2741 34068799 34068973 1.680000e-42 183.0
33 TraesCS7D01G158900 chr1A 85.227 176 22 3 2569 2741 238111561 238111735 7.800000e-41 178.0
34 TraesCS7D01G158900 chr1A 84.746 177 22 4 2569 2741 94785931 94786106 3.630000e-39 172.0
35 TraesCS7D01G158900 chrUn 84.746 177 22 4 2569 2741 86507389 86507214 3.630000e-39 172.0
36 TraesCS7D01G158900 chr6B 84.746 177 22 4 2569 2741 596622947 596623122 3.630000e-39 172.0
37 TraesCS7D01G158900 chr3B 84.746 177 22 4 2569 2741 92320458 92320633 3.630000e-39 172.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G158900 chr7D 108084490 108087230 2740 False 5062.00 5062 100.0000 1 2741 1 chr7D.!!$F1 2740
1 TraesCS7D01G158900 chr7D 108411428 108414198 2770 False 394.80 1122 87.3846 1 2047 5 chr7D.!!$F2 2046
2 TraesCS7D01G158900 chr7B 67807862 67808783 921 False 1024.00 1024 86.6600 769 1729 1 chr7B.!!$F2 960
3 TraesCS7D01G158900 chr7B 66978324 66979661 1337 False 838.45 1613 90.9560 703 2485 2 chr7B.!!$F4 1782
4 TraesCS7D01G158900 chr7A 113370637 113371694 1057 False 1299.00 1299 88.7380 703 1795 1 chr7A.!!$F1 1092

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
307 309 0.31716 TCCTACCTGTCAGTGCAACG 59.683 55.0 0.0 0.0 45.86 4.1 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2069 2917 0.028902 CTATTTAAAGGGCGCGCACC 59.971 55.0 32.95 28.45 0.0 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
86 88 8.889717 TCGTAAGGATTTTCATACTCCAAATTC 58.110 33.333 0.00 0.00 38.47 2.17
99 101 9.617975 CATACTCCAAATTCTTTTGAAAGTCTC 57.382 33.333 3.63 0.00 44.11 3.36
100 102 7.043961 ACTCCAAATTCTTTTGAAAGTCTCC 57.956 36.000 3.63 0.00 44.11 3.71
112 114 1.535833 AAGTCTCCGAAGCGAAGAGA 58.464 50.000 0.00 0.00 34.33 3.10
138 140 0.671781 GCGGTGAGCCTATGCCTATG 60.672 60.000 0.00 0.00 40.81 2.23
142 144 1.277557 GTGAGCCTATGCCTATGGGAG 59.722 57.143 0.00 0.00 37.11 4.30
153 155 2.027653 GCCTATGGGAGTAAGAGCATCC 60.028 54.545 0.00 0.00 31.30 3.51
154 156 3.515562 CCTATGGGAGTAAGAGCATCCT 58.484 50.000 0.00 0.00 33.40 3.24
160 162 2.224018 GGAGTAAGAGCATCCTGAGCAG 60.224 54.545 0.00 0.00 33.66 4.24
169 171 2.356125 GCATCCTGAGCAGTTCCCTAAA 60.356 50.000 0.00 0.00 0.00 1.85
172 174 1.630878 CCTGAGCAGTTCCCTAAACCT 59.369 52.381 0.00 0.00 38.76 3.50
173 175 2.355209 CCTGAGCAGTTCCCTAAACCTC 60.355 54.545 0.00 0.00 38.76 3.85
174 176 2.569404 CTGAGCAGTTCCCTAAACCTCT 59.431 50.000 0.00 0.00 38.76 3.69
175 177 2.567615 TGAGCAGTTCCCTAAACCTCTC 59.432 50.000 0.00 0.00 38.76 3.20
176 178 2.835156 GAGCAGTTCCCTAAACCTCTCT 59.165 50.000 0.00 0.00 38.76 3.10
181 183 2.239150 GTTCCCTAAACCTCTCTTCCCC 59.761 54.545 0.00 0.00 31.20 4.81
190 192 2.111972 ACCTCTCTTCCCCTTGAGTGTA 59.888 50.000 0.00 0.00 0.00 2.90
206 208 6.374417 TGAGTGTATTTAAGGGCTCTTTCT 57.626 37.500 2.94 0.00 34.59 2.52
238 240 1.581934 GGTTTTACGGGTATACGGCC 58.418 55.000 0.00 0.00 38.39 6.13
240 242 0.529555 TTTTACGGGTATACGGCCGC 60.530 55.000 28.58 8.81 38.39 6.53
242 244 1.670949 TTACGGGTATACGGCCGCAA 61.671 55.000 28.58 15.21 38.39 4.85
243 245 2.348605 TACGGGTATACGGCCGCAAC 62.349 60.000 28.58 20.41 38.39 4.17
246 248 1.708193 GGGTATACGGCCGCAACAAC 61.708 60.000 28.58 16.19 0.00 3.32
250 252 3.765660 TATACGGCCGCAACAACTCCC 62.766 57.143 28.58 0.00 0.00 4.30
253 255 2.349755 GCCGCAACAACTCCCCTA 59.650 61.111 0.00 0.00 0.00 3.53
254 256 2.038837 GCCGCAACAACTCCCCTAC 61.039 63.158 0.00 0.00 0.00 3.18
264 266 3.462205 ACAACTCCCCTACAAACCTCTTT 59.538 43.478 0.00 0.00 0.00 2.52
276 278 7.665974 CCTACAAACCTCTTTCCAAACTAAGAT 59.334 37.037 0.00 0.00 30.57 2.40
282 284 6.486993 ACCTCTTTCCAAACTAAGATTGACAC 59.513 38.462 0.00 0.00 30.57 3.67
303 305 0.679505 TGTGTCCTACCTGTCAGTGC 59.320 55.000 0.00 0.00 0.00 4.40
305 307 1.070134 GTGTCCTACCTGTCAGTGCAA 59.930 52.381 0.00 0.00 0.00 4.08
307 309 0.317160 TCCTACCTGTCAGTGCAACG 59.683 55.000 0.00 0.00 45.86 4.10
314 340 0.319040 TGTCAGTGCAACGCTCTCTC 60.319 55.000 0.00 0.00 45.86 3.20
334 360 4.166011 GCGCGTGCATGGAAGACC 62.166 66.667 17.66 0.00 42.15 3.85
335 361 2.434884 CGCGTGCATGGAAGACCT 60.435 61.111 8.27 0.00 37.04 3.85
337 363 2.456119 GCGTGCATGGAAGACCTCG 61.456 63.158 8.27 0.00 37.04 4.63
360 386 1.330655 ACCGATGAAGCTCCGATGGT 61.331 55.000 0.00 0.00 0.00 3.55
371 397 0.908910 TCCGATGGTTGCCTACATGT 59.091 50.000 2.69 2.69 0.00 3.21
379 405 4.489771 GCCTACATGTGGCGGCCT 62.490 66.667 21.46 1.18 41.03 5.19
408 452 2.633657 GCAGCGGCGATAACATGG 59.366 61.111 12.98 0.00 0.00 3.66
418 462 1.153249 ATAACATGGGTGTCCGGCG 60.153 57.895 0.00 0.00 37.67 6.46
450 494 3.043713 CGTGCTGACGTGGCATGT 61.044 61.111 13.11 13.11 41.86 3.21
452 496 2.110835 TGCTGACGTGGCATGTGT 59.889 55.556 18.67 3.04 34.56 3.72
455 499 1.506309 GCTGACGTGGCATGTGTTGA 61.506 55.000 18.67 0.00 0.00 3.18
532 576 4.007581 TCTTCTATTGGAGGGGTGATGA 57.992 45.455 0.00 0.00 0.00 2.92
571 616 8.171164 AGAGATTCAACTTTCTTTGGTTTAGG 57.829 34.615 0.00 0.00 0.00 2.69
579 651 5.593095 ACTTTCTTTGGTTTAGGGTCTCAAC 59.407 40.000 0.00 0.00 0.00 3.18
582 654 5.374071 TCTTTGGTTTAGGGTCTCAACTTC 58.626 41.667 0.00 0.00 0.00 3.01
630 702 6.628919 AAACGGGGCTATATGTGTATTTTC 57.371 37.500 0.00 0.00 0.00 2.29
650 745 8.664211 ATTTTCTAATAGACCGGAGATGTTTC 57.336 34.615 9.46 0.00 0.00 2.78
651 746 6.785337 TTCTAATAGACCGGAGATGTTTCA 57.215 37.500 9.46 0.00 0.00 2.69
652 747 6.785337 TCTAATAGACCGGAGATGTTTCAA 57.215 37.500 9.46 0.00 0.00 2.69
653 748 7.361457 TCTAATAGACCGGAGATGTTTCAAT 57.639 36.000 9.46 0.00 0.00 2.57
654 749 8.473358 TCTAATAGACCGGAGATGTTTCAATA 57.527 34.615 9.46 0.00 0.00 1.90
655 750 8.920174 TCTAATAGACCGGAGATGTTTCAATAA 58.080 33.333 9.46 0.00 0.00 1.40
656 751 9.197694 CTAATAGACCGGAGATGTTTCAATAAG 57.802 37.037 9.46 0.00 0.00 1.73
657 752 5.677319 AGACCGGAGATGTTTCAATAAGA 57.323 39.130 9.46 0.00 0.00 2.10
658 753 5.665459 AGACCGGAGATGTTTCAATAAGAG 58.335 41.667 9.46 0.00 0.00 2.85
659 754 4.770795 ACCGGAGATGTTTCAATAAGAGG 58.229 43.478 9.46 0.00 0.00 3.69
660 755 3.561725 CCGGAGATGTTTCAATAAGAGGC 59.438 47.826 0.00 0.00 0.00 4.70
661 756 4.446371 CGGAGATGTTTCAATAAGAGGCT 58.554 43.478 0.00 0.00 0.00 4.58
662 757 4.509600 CGGAGATGTTTCAATAAGAGGCTC 59.490 45.833 6.34 6.34 0.00 4.70
663 758 5.679601 GGAGATGTTTCAATAAGAGGCTCT 58.320 41.667 12.24 12.24 0.00 4.09
664 759 6.118852 GGAGATGTTTCAATAAGAGGCTCTT 58.881 40.000 30.67 30.67 40.35 2.85
665 760 6.601217 GGAGATGTTTCAATAAGAGGCTCTTT 59.399 38.462 32.69 18.24 37.89 2.52
666 761 7.121907 GGAGATGTTTCAATAAGAGGCTCTTTT 59.878 37.037 32.69 23.00 37.89 2.27
667 762 9.167311 GAGATGTTTCAATAAGAGGCTCTTTTA 57.833 33.333 32.69 17.87 37.89 1.52
668 763 9.692325 AGATGTTTCAATAAGAGGCTCTTTTAT 57.308 29.630 32.69 19.31 37.89 1.40
679 774 6.712276 AGAGGCTCTTTTATAAATATCCCCG 58.288 40.000 12.24 0.00 0.00 5.73
680 775 5.254115 AGGCTCTTTTATAAATATCCCCGC 58.746 41.667 0.00 0.00 0.00 6.13
681 776 5.007682 GGCTCTTTTATAAATATCCCCGCA 58.992 41.667 0.00 0.00 0.00 5.69
682 777 5.475564 GGCTCTTTTATAAATATCCCCGCAA 59.524 40.000 0.00 0.00 0.00 4.85
683 778 6.015772 GGCTCTTTTATAAATATCCCCGCAAA 60.016 38.462 0.00 0.00 0.00 3.68
684 779 7.430441 GCTCTTTTATAAATATCCCCGCAAAA 58.570 34.615 0.00 0.00 0.00 2.44
685 780 7.923878 GCTCTTTTATAAATATCCCCGCAAAAA 59.076 33.333 0.00 0.00 0.00 1.94
750 845 2.095461 TCAACTGACTCGGGAGATGAG 58.905 52.381 2.08 0.00 38.80 2.90
751 846 1.135915 CAACTGACTCGGGAGATGAGG 59.864 57.143 2.08 0.00 37.79 3.86
817 914 3.147595 TCGGGGATCTCGCACCAG 61.148 66.667 0.00 0.00 0.00 4.00
819 916 2.125326 CGGGGATCTCGCACCAGTA 61.125 63.158 0.00 0.00 0.00 2.74
852 949 1.901085 GGATCGTGTGCTTCCTCCT 59.099 57.895 0.00 0.00 0.00 3.69
887 984 4.450976 CCGTTAGATCCAATCAATCACCA 58.549 43.478 0.00 0.00 0.00 4.17
899 996 2.625314 TCAATCACCAAAACGCAATCCA 59.375 40.909 0.00 0.00 0.00 3.41
911 1008 0.620556 GCAATCCAAGACCCTCTCCA 59.379 55.000 0.00 0.00 0.00 3.86
1017 1121 2.740826 ACAACCCAATCCGTCGCG 60.741 61.111 0.00 0.00 0.00 5.87
1018 1122 2.433491 CAACCCAATCCGTCGCGA 60.433 61.111 3.71 3.71 0.00 5.87
1039 1149 3.611025 TCCACTTCAAGTTCCCCAAAT 57.389 42.857 0.00 0.00 0.00 2.32
1040 1150 3.496331 TCCACTTCAAGTTCCCCAAATC 58.504 45.455 0.00 0.00 0.00 2.17
1041 1151 2.562738 CCACTTCAAGTTCCCCAAATCC 59.437 50.000 0.00 0.00 0.00 3.01
1042 1152 2.562738 CACTTCAAGTTCCCCAAATCCC 59.437 50.000 0.00 0.00 0.00 3.85
1043 1153 2.179427 CTTCAAGTTCCCCAAATCCCC 58.821 52.381 0.00 0.00 0.00 4.81
1044 1154 1.162505 TCAAGTTCCCCAAATCCCCA 58.837 50.000 0.00 0.00 0.00 4.96
1045 1155 1.505538 TCAAGTTCCCCAAATCCCCAA 59.494 47.619 0.00 0.00 0.00 4.12
1046 1156 1.623311 CAAGTTCCCCAAATCCCCAAC 59.377 52.381 0.00 0.00 0.00 3.77
1047 1157 0.116342 AGTTCCCCAAATCCCCAACC 59.884 55.000 0.00 0.00 0.00 3.77
1093 1206 1.442184 TTCGCAGTCGACGAGAAGC 60.442 57.895 17.30 13.31 45.43 3.86
1137 1251 3.382832 CAGACCGCCCGGAAGTCT 61.383 66.667 14.44 9.25 41.49 3.24
1532 1877 3.139850 CCTAGATCAAGCATCTGCCTTG 58.860 50.000 0.00 3.73 42.37 3.61
1565 1910 1.382522 CCGGATTGCTGCAATGTAGT 58.617 50.000 30.62 8.94 33.90 2.73
1566 1911 1.064505 CCGGATTGCTGCAATGTAGTG 59.935 52.381 30.62 14.99 33.90 2.74
1567 1912 1.739466 CGGATTGCTGCAATGTAGTGT 59.261 47.619 30.62 7.37 33.90 3.55
1684 2125 9.952030 TTACATAGTTACAATGACTCATTTCCA 57.048 29.630 1.17 0.00 31.05 3.53
1772 2215 3.664107 TGTAATTTCAGCGCTCTGTTCT 58.336 40.909 7.13 0.00 41.10 3.01
1773 2216 4.065088 TGTAATTTCAGCGCTCTGTTCTT 58.935 39.130 7.13 0.00 41.10 2.52
1774 2217 4.515191 TGTAATTTCAGCGCTCTGTTCTTT 59.485 37.500 7.13 0.00 41.10 2.52
1775 2218 3.549299 ATTTCAGCGCTCTGTTCTTTG 57.451 42.857 7.13 0.00 41.10 2.77
1776 2219 2.238942 TTCAGCGCTCTGTTCTTTGA 57.761 45.000 7.13 0.00 41.10 2.69
1810 2275 0.877743 GCTGTCCTGGCTTTGTCTTC 59.122 55.000 0.00 0.00 0.00 2.87
1843 2319 1.654023 CCGTTTGGCCTTCGGATTCC 61.654 60.000 22.48 0.00 46.05 3.01
1844 2320 0.676782 CGTTTGGCCTTCGGATTCCT 60.677 55.000 3.32 0.00 0.00 3.36
1847 2323 0.322456 TTGGCCTTCGGATTCCTGTG 60.322 55.000 3.32 0.00 0.00 3.66
1919 2519 6.000891 TGTCATTGTGATCTTTGTAACAGC 57.999 37.500 0.00 0.00 0.00 4.40
1936 2536 2.096417 ACAGCGCGAACATAAAAGACAC 60.096 45.455 12.10 0.00 0.00 3.67
1954 2554 2.591715 GCAGCACGACCACCACTT 60.592 61.111 0.00 0.00 0.00 3.16
1957 2805 1.359848 CAGCACGACCACCACTTATC 58.640 55.000 0.00 0.00 0.00 1.75
1958 2806 1.066858 CAGCACGACCACCACTTATCT 60.067 52.381 0.00 0.00 0.00 1.98
2053 2901 9.666163 CAATAATACTAATAATTTACGGACGCG 57.334 33.333 3.53 3.53 0.00 6.01
2054 2902 6.695292 AATACTAATAATTTACGGACGCGG 57.305 37.500 12.47 0.00 0.00 6.46
2055 2903 4.305989 ACTAATAATTTACGGACGCGGA 57.694 40.909 12.47 0.00 0.00 5.54
2056 2904 4.874970 ACTAATAATTTACGGACGCGGAT 58.125 39.130 12.47 0.00 0.00 4.18
2057 2905 5.291971 ACTAATAATTTACGGACGCGGATT 58.708 37.500 12.47 1.61 0.00 3.01
2058 2906 5.754890 ACTAATAATTTACGGACGCGGATTT 59.245 36.000 12.47 0.00 0.00 2.17
2059 2907 2.817538 AATTTACGGACGCGGATTTG 57.182 45.000 12.47 0.00 0.00 2.32
2060 2908 1.011333 ATTTACGGACGCGGATTTGG 58.989 50.000 12.47 0.00 0.00 3.28
2061 2909 0.320596 TTTACGGACGCGGATTTGGT 60.321 50.000 12.47 1.72 0.00 3.67
2062 2910 1.015085 TTACGGACGCGGATTTGGTG 61.015 55.000 12.47 0.00 0.00 4.17
2063 2911 1.875420 TACGGACGCGGATTTGGTGA 61.875 55.000 12.47 0.00 0.00 4.02
2064 2912 2.030401 CGGACGCGGATTTGGTGAA 61.030 57.895 12.47 0.00 0.00 3.18
2065 2913 1.500396 GGACGCGGATTTGGTGAAC 59.500 57.895 12.47 0.00 0.00 3.18
2066 2914 1.231958 GGACGCGGATTTGGTGAACA 61.232 55.000 12.47 0.00 0.00 3.18
2067 2915 0.802494 GACGCGGATTTGGTGAACAT 59.198 50.000 12.47 0.00 0.00 2.71
2068 2916 0.521291 ACGCGGATTTGGTGAACATG 59.479 50.000 12.47 0.00 0.00 3.21
2069 2917 0.179166 CGCGGATTTGGTGAACATGG 60.179 55.000 0.00 0.00 0.00 3.66
2070 2918 0.173255 GCGGATTTGGTGAACATGGG 59.827 55.000 0.00 0.00 0.00 4.00
2071 2919 1.544724 CGGATTTGGTGAACATGGGT 58.455 50.000 0.00 0.00 0.00 4.51
2072 2920 1.202114 CGGATTTGGTGAACATGGGTG 59.798 52.381 0.00 0.00 0.00 4.61
2073 2921 1.066929 GGATTTGGTGAACATGGGTGC 60.067 52.381 0.00 0.00 0.00 5.01
2074 2922 0.602562 ATTTGGTGAACATGGGTGCG 59.397 50.000 0.00 0.00 0.00 5.34
2075 2923 2.081425 TTTGGTGAACATGGGTGCGC 62.081 55.000 0.00 0.00 31.86 6.09
2076 2924 4.101790 GGTGAACATGGGTGCGCG 62.102 66.667 0.00 0.00 33.58 6.86
2077 2925 4.759096 GTGAACATGGGTGCGCGC 62.759 66.667 27.26 27.26 0.00 6.86
2085 2933 3.366915 GGGTGCGCGCCCTTTAAA 61.367 61.111 44.49 4.37 45.22 1.52
2086 2934 2.706834 GGGTGCGCGCCCTTTAAAT 61.707 57.895 44.49 0.00 45.22 1.40
2087 2935 1.378124 GGGTGCGCGCCCTTTAAATA 61.378 55.000 44.49 2.53 45.22 1.40
2088 2936 0.028902 GGTGCGCGCCCTTTAAATAG 59.971 55.000 29.80 0.00 0.00 1.73
2089 2937 0.730840 GTGCGCGCCCTTTAAATAGT 59.269 50.000 30.77 0.00 0.00 2.12
2090 2938 1.935199 GTGCGCGCCCTTTAAATAGTA 59.065 47.619 30.77 0.71 0.00 1.82
2091 2939 2.352342 GTGCGCGCCCTTTAAATAGTAA 59.648 45.455 30.77 0.16 0.00 2.24
2092 2940 3.008330 TGCGCGCCCTTTAAATAGTAAA 58.992 40.909 30.77 0.00 0.00 2.01
2093 2941 3.628487 TGCGCGCCCTTTAAATAGTAAAT 59.372 39.130 30.77 0.00 0.00 1.40
2094 2942 4.096682 TGCGCGCCCTTTAAATAGTAAATT 59.903 37.500 30.77 0.00 0.00 1.82
2095 2943 5.038683 GCGCGCCCTTTAAATAGTAAATTT 58.961 37.500 23.24 0.00 0.00 1.82
2096 2944 6.183360 TGCGCGCCCTTTAAATAGTAAATTTA 60.183 34.615 30.77 0.00 0.00 1.40
2097 2945 6.358822 GCGCGCCCTTTAAATAGTAAATTTAG 59.641 38.462 23.24 0.00 0.00 1.85
2098 2946 7.632721 CGCGCCCTTTAAATAGTAAATTTAGA 58.367 34.615 0.00 0.00 0.00 2.10
2099 2947 8.124199 CGCGCCCTTTAAATAGTAAATTTAGAA 58.876 33.333 0.00 0.00 0.00 2.10
2100 2948 9.791820 GCGCCCTTTAAATAGTAAATTTAGAAA 57.208 29.630 0.00 0.00 0.00 2.52
2167 3015 8.997621 ATATACATAGCAAACCGGTATACTTG 57.002 34.615 8.00 10.30 36.13 3.16
2168 3016 3.875134 ACATAGCAAACCGGTATACTTGC 59.125 43.478 26.91 26.91 43.56 4.01
2169 3017 2.483014 AGCAAACCGGTATACTTGCA 57.517 45.000 32.38 0.00 45.22 4.08
2170 3018 2.999331 AGCAAACCGGTATACTTGCAT 58.001 42.857 32.38 19.88 45.22 3.96
2171 3019 4.145365 AGCAAACCGGTATACTTGCATA 57.855 40.909 32.38 0.00 45.22 3.14
2172 3020 4.714632 AGCAAACCGGTATACTTGCATAT 58.285 39.130 32.38 16.80 45.22 1.78
2173 3021 4.515191 AGCAAACCGGTATACTTGCATATG 59.485 41.667 32.38 6.09 45.22 1.78
2174 3022 4.513692 GCAAACCGGTATACTTGCATATGA 59.486 41.667 28.44 0.00 42.91 2.15
2175 3023 5.008217 GCAAACCGGTATACTTGCATATGAA 59.992 40.000 28.44 0.00 42.91 2.57
2176 3024 6.658831 CAAACCGGTATACTTGCATATGAAG 58.341 40.000 8.00 9.71 0.00 3.02
2177 3025 5.546621 ACCGGTATACTTGCATATGAAGT 57.453 39.130 4.49 18.35 37.43 3.01
2178 3026 5.925509 ACCGGTATACTTGCATATGAAGTT 58.074 37.500 4.49 12.53 35.30 2.66
2179 3027 6.354130 ACCGGTATACTTGCATATGAAGTTT 58.646 36.000 4.49 15.39 35.30 2.66
2180 3028 6.482308 ACCGGTATACTTGCATATGAAGTTTC 59.518 38.462 4.49 12.52 35.30 2.78
2181 3029 6.481976 CCGGTATACTTGCATATGAAGTTTCA 59.518 38.462 19.07 0.00 42.14 2.69
2182 3030 7.345192 CGGTATACTTGCATATGAAGTTTCAC 58.655 38.462 19.07 15.06 40.49 3.18
2183 3031 7.345192 GGTATACTTGCATATGAAGTTTCACG 58.655 38.462 19.07 4.14 40.49 4.35
2184 3032 7.223971 GGTATACTTGCATATGAAGTTTCACGA 59.776 37.037 19.07 6.95 40.49 4.35
2185 3033 5.940192 ACTTGCATATGAAGTTTCACGAA 57.060 34.783 6.97 0.00 40.49 3.85
2186 3034 5.931532 ACTTGCATATGAAGTTTCACGAAG 58.068 37.500 6.97 0.00 40.49 3.79
2187 3035 5.700832 ACTTGCATATGAAGTTTCACGAAGA 59.299 36.000 6.97 0.00 40.49 2.87
2188 3036 6.204688 ACTTGCATATGAAGTTTCACGAAGAA 59.795 34.615 6.97 0.00 40.49 2.52
2189 3037 6.552859 TGCATATGAAGTTTCACGAAGAAA 57.447 33.333 6.97 0.00 43.71 2.52
2199 3047 5.811399 TTTCACGAAGAAATCACAACAGT 57.189 34.783 0.00 0.00 41.17 3.55
2200 3048 4.794248 TCACGAAGAAATCACAACAGTG 57.206 40.909 0.00 0.00 34.56 3.66
2201 3049 3.559655 TCACGAAGAAATCACAACAGTGG 59.440 43.478 0.00 0.00 34.04 4.00
2202 3050 3.312421 CACGAAGAAATCACAACAGTGGT 59.688 43.478 0.00 0.00 34.04 4.16
2203 3051 4.509970 CACGAAGAAATCACAACAGTGGTA 59.490 41.667 0.00 0.00 34.04 3.25
2204 3052 5.007234 CACGAAGAAATCACAACAGTGGTAA 59.993 40.000 0.00 0.00 34.04 2.85
2205 3053 5.587043 ACGAAGAAATCACAACAGTGGTAAA 59.413 36.000 0.00 0.00 34.04 2.01
2206 3054 6.094325 ACGAAGAAATCACAACAGTGGTAAAA 59.906 34.615 0.00 0.00 34.04 1.52
2207 3055 7.138736 CGAAGAAATCACAACAGTGGTAAAAT 58.861 34.615 0.00 0.00 34.04 1.82
2208 3056 7.113404 CGAAGAAATCACAACAGTGGTAAAATG 59.887 37.037 0.00 0.00 34.04 2.32
2209 3057 7.581213 AGAAATCACAACAGTGGTAAAATGA 57.419 32.000 0.00 0.00 34.04 2.57
2210 3058 8.181904 AGAAATCACAACAGTGGTAAAATGAT 57.818 30.769 0.00 0.00 34.04 2.45
2211 3059 9.295825 AGAAATCACAACAGTGGTAAAATGATA 57.704 29.630 0.00 0.00 34.04 2.15
2212 3060 9.906660 GAAATCACAACAGTGGTAAAATGATAA 57.093 29.630 0.00 0.00 34.04 1.75
2216 3064 9.906660 TCACAACAGTGGTAAAATGATAAAATC 57.093 29.630 0.00 0.00 34.04 2.17
2217 3065 9.689976 CACAACAGTGGTAAAATGATAAAATCA 57.310 29.630 0.00 0.00 44.55 2.57
2258 3106 8.420374 ACACTGTTTAATGAATAGTATGGTCG 57.580 34.615 0.00 0.00 37.58 4.79
2259 3107 8.255206 ACACTGTTTAATGAATAGTATGGTCGA 58.745 33.333 0.00 0.00 37.58 4.20
2260 3108 9.093970 CACTGTTTAATGAATAGTATGGTCGAA 57.906 33.333 0.00 0.00 37.58 3.71
2261 3109 9.832445 ACTGTTTAATGAATAGTATGGTCGAAT 57.168 29.630 0.00 0.00 37.86 3.34
2293 3141 8.712285 TTTCTTTACTAGAAATATCGTGGGTG 57.288 34.615 0.00 0.00 45.60 4.61
2294 3142 7.414222 TCTTTACTAGAAATATCGTGGGTGT 57.586 36.000 0.00 0.00 0.00 4.16
2295 3143 7.486647 TCTTTACTAGAAATATCGTGGGTGTC 58.513 38.462 0.00 0.00 0.00 3.67
2296 3144 6.778834 TTACTAGAAATATCGTGGGTGTCA 57.221 37.500 0.00 0.00 0.00 3.58
2297 3145 5.670792 ACTAGAAATATCGTGGGTGTCAA 57.329 39.130 0.00 0.00 0.00 3.18
2298 3146 6.235231 ACTAGAAATATCGTGGGTGTCAAT 57.765 37.500 0.00 0.00 0.00 2.57
2299 3147 7.356089 ACTAGAAATATCGTGGGTGTCAATA 57.644 36.000 0.00 0.00 0.00 1.90
2300 3148 7.208080 ACTAGAAATATCGTGGGTGTCAATAC 58.792 38.462 0.00 0.00 0.00 1.89
2301 3149 5.984725 AGAAATATCGTGGGTGTCAATACA 58.015 37.500 0.00 0.00 0.00 2.29
2302 3150 6.591935 AGAAATATCGTGGGTGTCAATACAT 58.408 36.000 0.00 0.00 38.08 2.29
2303 3151 6.706270 AGAAATATCGTGGGTGTCAATACATC 59.294 38.462 0.00 0.00 38.08 3.06
2304 3152 3.904800 ATCGTGGGTGTCAATACATCA 57.095 42.857 0.00 0.00 38.58 3.07
2305 3153 3.904800 TCGTGGGTGTCAATACATCAT 57.095 42.857 0.00 0.00 38.58 2.45
2306 3154 3.530535 TCGTGGGTGTCAATACATCATG 58.469 45.455 0.00 0.00 38.58 3.07
2307 3155 3.196685 TCGTGGGTGTCAATACATCATGA 59.803 43.478 0.00 0.00 38.58 3.07
2308 3156 3.938334 CGTGGGTGTCAATACATCATGAA 59.062 43.478 0.00 0.00 38.58 2.57
2309 3157 4.394610 CGTGGGTGTCAATACATCATGAAA 59.605 41.667 0.00 0.00 38.58 2.69
2310 3158 5.640732 GTGGGTGTCAATACATCATGAAAC 58.359 41.667 0.00 0.00 38.58 2.78
2311 3159 5.415701 GTGGGTGTCAATACATCATGAAACT 59.584 40.000 0.00 0.00 38.58 2.66
2312 3160 6.009589 TGGGTGTCAATACATCATGAAACTT 58.990 36.000 0.00 0.00 38.58 2.66
2313 3161 6.150976 TGGGTGTCAATACATCATGAAACTTC 59.849 38.462 0.00 0.00 38.58 3.01
2314 3162 6.150976 GGGTGTCAATACATCATGAAACTTCA 59.849 38.462 0.00 0.00 38.58 3.02
2315 3163 7.023575 GGTGTCAATACATCATGAAACTTCAC 58.976 38.462 0.00 2.74 37.76 3.18
2316 3164 7.308529 GGTGTCAATACATCATGAAACTTCACA 60.309 37.037 0.00 0.00 37.76 3.58
2317 3165 7.535258 GTGTCAATACATCATGAAACTTCACAC 59.465 37.037 0.00 4.57 37.76 3.82
2318 3166 6.738200 GTCAATACATCATGAAACTTCACACG 59.262 38.462 0.00 0.00 40.49 4.49
2319 3167 6.426633 TCAATACATCATGAAACTTCACACGT 59.573 34.615 0.00 0.00 40.49 4.49
2320 3168 4.472691 ACATCATGAAACTTCACACGTG 57.527 40.909 15.48 15.48 40.49 4.49
2321 3169 3.876914 ACATCATGAAACTTCACACGTGT 59.123 39.130 17.22 17.22 40.49 4.49
2322 3170 3.942539 TCATGAAACTTCACACGTGTG 57.057 42.857 37.04 37.04 46.91 3.82
2323 3171 3.266636 TCATGAAACTTCACACGTGTGT 58.733 40.909 39.25 25.17 45.76 3.72
2324 3172 4.434520 TCATGAAACTTCACACGTGTGTA 58.565 39.130 39.25 31.80 45.76 2.90
2325 3173 4.870991 TCATGAAACTTCACACGTGTGTAA 59.129 37.500 39.25 30.18 45.76 2.41
2326 3174 5.351740 TCATGAAACTTCACACGTGTGTAAA 59.648 36.000 39.25 28.58 45.76 2.01
2327 3175 5.608676 TGAAACTTCACACGTGTGTAAAA 57.391 34.783 39.25 27.96 45.76 1.52
2328 3176 6.184580 TGAAACTTCACACGTGTGTAAAAT 57.815 33.333 39.25 26.59 45.76 1.82
2329 3177 6.024664 TGAAACTTCACACGTGTGTAAAATG 58.975 36.000 39.25 26.34 45.76 2.32
2330 3178 5.804692 AACTTCACACGTGTGTAAAATGA 57.195 34.783 39.25 21.56 45.76 2.57
2331 3179 6.371809 AACTTCACACGTGTGTAAAATGAT 57.628 33.333 39.25 19.18 45.76 2.45
2332 3180 5.985781 ACTTCACACGTGTGTAAAATGATC 58.014 37.500 39.25 0.00 45.76 2.92
2333 3181 5.758296 ACTTCACACGTGTGTAAAATGATCT 59.242 36.000 39.25 14.46 45.76 2.75
2334 3182 6.926826 ACTTCACACGTGTGTAAAATGATCTA 59.073 34.615 39.25 19.04 45.76 1.98
2335 3183 6.699895 TCACACGTGTGTAAAATGATCTAC 57.300 37.500 39.25 0.00 45.76 2.59
2336 3184 6.452242 TCACACGTGTGTAAAATGATCTACT 58.548 36.000 39.25 3.05 45.76 2.57
2337 3185 7.595604 TCACACGTGTGTAAAATGATCTACTA 58.404 34.615 39.25 17.85 45.76 1.82
2338 3186 8.083462 TCACACGTGTGTAAAATGATCTACTAA 58.917 33.333 39.25 17.50 45.76 2.24
2339 3187 8.705134 CACACGTGTGTAAAATGATCTACTAAA 58.295 33.333 35.03 0.00 42.83 1.85
2340 3188 9.431887 ACACGTGTGTAAAATGATCTACTAAAT 57.568 29.630 22.71 0.00 42.90 1.40
2409 3257 7.513371 TTTTGAATTTACTATTCACGTGGGT 57.487 32.000 17.00 11.87 37.71 4.51
2410 3258 6.489127 TTGAATTTACTATTCACGTGGGTG 57.511 37.500 17.00 6.47 45.78 4.61
2411 3259 4.393680 TGAATTTACTATTCACGTGGGTGC 59.606 41.667 17.00 1.35 44.03 5.01
2412 3260 1.999048 TTACTATTCACGTGGGTGCG 58.001 50.000 17.00 3.60 44.03 5.34
2413 3261 0.458889 TACTATTCACGTGGGTGCGC 60.459 55.000 17.00 0.00 44.03 6.09
2414 3262 2.798501 CTATTCACGTGGGTGCGCG 61.799 63.158 17.00 0.00 44.03 6.86
2415 3263 3.284133 TATTCACGTGGGTGCGCGA 62.284 57.895 17.00 0.00 44.03 5.87
2431 3279 3.867055 CGCGAGCATTCATGTTTATCT 57.133 42.857 0.00 0.00 0.00 1.98
2432 3280 4.201208 CGCGAGCATTCATGTTTATCTT 57.799 40.909 0.00 0.00 0.00 2.40
2433 3281 4.591202 CGCGAGCATTCATGTTTATCTTT 58.409 39.130 0.00 0.00 0.00 2.52
2434 3282 4.435554 CGCGAGCATTCATGTTTATCTTTG 59.564 41.667 0.00 0.00 0.00 2.77
2435 3283 5.335127 GCGAGCATTCATGTTTATCTTTGT 58.665 37.500 0.00 0.00 0.00 2.83
2436 3284 6.486248 GCGAGCATTCATGTTTATCTTTGTA 58.514 36.000 0.00 0.00 0.00 2.41
2437 3285 7.134815 GCGAGCATTCATGTTTATCTTTGTAT 58.865 34.615 0.00 0.00 0.00 2.29
2438 3286 7.645340 GCGAGCATTCATGTTTATCTTTGTATT 59.355 33.333 0.00 0.00 0.00 1.89
2439 3287 9.507280 CGAGCATTCATGTTTATCTTTGTATTT 57.493 29.630 0.00 0.00 0.00 1.40
2487 3335 9.753674 AAACATGGAGATTTTATCTTAGTTGGA 57.246 29.630 0.00 0.00 40.38 3.53
2488 3336 8.738645 ACATGGAGATTTTATCTTAGTTGGAC 57.261 34.615 0.00 0.00 40.38 4.02
2489 3337 8.328758 ACATGGAGATTTTATCTTAGTTGGACA 58.671 33.333 0.00 0.00 40.38 4.02
2490 3338 9.177608 CATGGAGATTTTATCTTAGTTGGACAA 57.822 33.333 0.00 0.00 40.38 3.18
2491 3339 8.561738 TGGAGATTTTATCTTAGTTGGACAAC 57.438 34.615 7.08 7.08 40.38 3.32
2492 3340 8.160765 TGGAGATTTTATCTTAGTTGGACAACA 58.839 33.333 16.58 1.38 40.72 3.33
2493 3341 9.010029 GGAGATTTTATCTTAGTTGGACAACAA 57.990 33.333 16.58 8.39 40.72 2.83
2498 3346 8.740123 TTTATCTTAGTTGGACAACAAAGTCA 57.260 30.769 16.58 0.00 43.47 3.41
2499 3347 6.619801 ATCTTAGTTGGACAACAAAGTCAC 57.380 37.500 16.58 0.00 43.47 3.67
2500 3348 5.492895 TCTTAGTTGGACAACAAAGTCACA 58.507 37.500 16.58 0.00 43.47 3.58
2501 3349 5.941058 TCTTAGTTGGACAACAAAGTCACAA 59.059 36.000 16.58 0.00 43.47 3.33
2502 3350 6.601613 TCTTAGTTGGACAACAAAGTCACAAT 59.398 34.615 16.58 0.00 43.47 2.71
2503 3351 7.771361 TCTTAGTTGGACAACAAAGTCACAATA 59.229 33.333 16.58 0.00 43.47 1.90
2504 3352 6.767524 AGTTGGACAACAAAGTCACAATAA 57.232 33.333 16.58 0.00 43.47 1.40
2505 3353 7.164230 AGTTGGACAACAAAGTCACAATAAA 57.836 32.000 16.58 0.00 43.47 1.40
2506 3354 7.033185 AGTTGGACAACAAAGTCACAATAAAC 58.967 34.615 16.58 0.00 43.47 2.01
2507 3355 5.574082 TGGACAACAAAGTCACAATAAACG 58.426 37.500 0.00 0.00 40.29 3.60
2508 3356 4.439776 GGACAACAAAGTCACAATAAACGC 59.560 41.667 0.00 0.00 40.29 4.84
2509 3357 4.032355 ACAACAAAGTCACAATAAACGCG 58.968 39.130 3.53 3.53 0.00 6.01
2510 3358 3.262135 ACAAAGTCACAATAAACGCGG 57.738 42.857 12.47 0.00 0.00 6.46
2511 3359 2.873472 ACAAAGTCACAATAAACGCGGA 59.127 40.909 12.47 0.00 0.00 5.54
2512 3360 3.312973 ACAAAGTCACAATAAACGCGGAA 59.687 39.130 12.47 0.00 0.00 4.30
2513 3361 4.023536 ACAAAGTCACAATAAACGCGGAAT 60.024 37.500 12.47 0.00 0.00 3.01
2514 3362 5.179742 ACAAAGTCACAATAAACGCGGAATA 59.820 36.000 12.47 0.00 0.00 1.75
2515 3363 4.852609 AGTCACAATAAACGCGGAATAC 57.147 40.909 12.47 0.00 0.00 1.89
2516 3364 3.619929 AGTCACAATAAACGCGGAATACC 59.380 43.478 12.47 0.00 0.00 2.73
2517 3365 2.937799 TCACAATAAACGCGGAATACCC 59.062 45.455 12.47 0.00 0.00 3.69
2518 3366 2.678836 CACAATAAACGCGGAATACCCA 59.321 45.455 12.47 0.00 34.14 4.51
2519 3367 3.314080 CACAATAAACGCGGAATACCCAT 59.686 43.478 12.47 0.00 34.14 4.00
2520 3368 3.314080 ACAATAAACGCGGAATACCCATG 59.686 43.478 12.47 0.00 34.14 3.66
2521 3369 2.695127 TAAACGCGGAATACCCATGT 57.305 45.000 12.47 0.00 34.14 3.21
2522 3370 1.828979 AAACGCGGAATACCCATGTT 58.171 45.000 12.47 0.00 34.51 2.71
2523 3371 1.828979 AACGCGGAATACCCATGTTT 58.171 45.000 12.47 0.00 30.41 2.83
2524 3372 1.375551 ACGCGGAATACCCATGTTTC 58.624 50.000 12.47 0.00 34.14 2.78
2525 3373 0.661020 CGCGGAATACCCATGTTTCC 59.339 55.000 0.00 0.00 36.40 3.13
2526 3374 1.757682 GCGGAATACCCATGTTTCCA 58.242 50.000 11.96 0.00 39.09 3.53
2527 3375 2.306847 GCGGAATACCCATGTTTCCAT 58.693 47.619 11.96 0.00 39.09 3.41
2528 3376 2.693074 GCGGAATACCCATGTTTCCATT 59.307 45.455 11.96 0.00 39.09 3.16
2529 3377 3.132111 GCGGAATACCCATGTTTCCATTT 59.868 43.478 11.96 0.00 39.09 2.32
2530 3378 4.681744 CGGAATACCCATGTTTCCATTTG 58.318 43.478 11.96 0.00 39.09 2.32
2531 3379 4.441356 CGGAATACCCATGTTTCCATTTGG 60.441 45.833 11.96 0.00 39.09 3.28
2532 3380 4.469586 GGAATACCCATGTTTCCATTTGGT 59.530 41.667 8.35 0.00 39.00 3.67
2533 3381 5.045942 GGAATACCCATGTTTCCATTTGGTT 60.046 40.000 8.35 0.00 39.00 3.67
2534 3382 6.155393 GGAATACCCATGTTTCCATTTGGTTA 59.845 38.462 8.35 0.00 39.00 2.85
2535 3383 7.147567 GGAATACCCATGTTTCCATTTGGTTAT 60.148 37.037 8.35 0.00 39.00 1.89
2536 3384 7.747809 ATACCCATGTTTCCATTTGGTTATT 57.252 32.000 0.00 0.00 35.93 1.40
2537 3385 6.446909 ACCCATGTTTCCATTTGGTTATTT 57.553 33.333 0.00 0.00 32.30 1.40
2538 3386 6.237154 ACCCATGTTTCCATTTGGTTATTTG 58.763 36.000 0.00 0.00 32.30 2.32
2539 3387 6.183361 ACCCATGTTTCCATTTGGTTATTTGT 60.183 34.615 0.00 0.00 32.30 2.83
2540 3388 6.371271 CCCATGTTTCCATTTGGTTATTTGTC 59.629 38.462 0.00 0.00 36.34 3.18
2541 3389 7.160726 CCATGTTTCCATTTGGTTATTTGTCT 58.839 34.615 0.00 0.00 36.34 3.41
2542 3390 7.331687 CCATGTTTCCATTTGGTTATTTGTCTC 59.668 37.037 0.00 0.00 36.34 3.36
2543 3391 7.353414 TGTTTCCATTTGGTTATTTGTCTCA 57.647 32.000 0.00 0.00 36.34 3.27
2544 3392 7.432869 TGTTTCCATTTGGTTATTTGTCTCAG 58.567 34.615 0.00 0.00 36.34 3.35
2545 3393 7.069331 TGTTTCCATTTGGTTATTTGTCTCAGT 59.931 33.333 0.00 0.00 36.34 3.41
2546 3394 7.595819 TTCCATTTGGTTATTTGTCTCAGTT 57.404 32.000 0.00 0.00 36.34 3.16
2547 3395 7.214467 TCCATTTGGTTATTTGTCTCAGTTC 57.786 36.000 0.00 0.00 36.34 3.01
2548 3396 7.004086 TCCATTTGGTTATTTGTCTCAGTTCT 58.996 34.615 0.00 0.00 36.34 3.01
2549 3397 7.505585 TCCATTTGGTTATTTGTCTCAGTTCTT 59.494 33.333 0.00 0.00 36.34 2.52
2550 3398 7.596248 CCATTTGGTTATTTGTCTCAGTTCTTG 59.404 37.037 0.00 0.00 0.00 3.02
2551 3399 7.873719 TTTGGTTATTTGTCTCAGTTCTTGA 57.126 32.000 0.00 0.00 0.00 3.02
2552 3400 8.463930 TTTGGTTATTTGTCTCAGTTCTTGAT 57.536 30.769 0.00 0.00 34.68 2.57
2553 3401 9.567776 TTTGGTTATTTGTCTCAGTTCTTGATA 57.432 29.630 0.00 0.00 34.68 2.15
2554 3402 8.547967 TGGTTATTTGTCTCAGTTCTTGATAC 57.452 34.615 0.00 0.00 34.68 2.24
2555 3403 7.606456 TGGTTATTTGTCTCAGTTCTTGATACC 59.394 37.037 0.00 0.00 33.26 2.73
2556 3404 7.201530 GGTTATTTGTCTCAGTTCTTGATACCG 60.202 40.741 0.00 0.00 33.26 4.02
2557 3405 3.868757 TGTCTCAGTTCTTGATACCGG 57.131 47.619 0.00 0.00 33.26 5.28
2558 3406 2.094182 TGTCTCAGTTCTTGATACCGGC 60.094 50.000 0.00 0.00 33.26 6.13
2559 3407 2.094182 GTCTCAGTTCTTGATACCGGCA 60.094 50.000 0.00 0.00 34.68 5.69
2560 3408 2.166459 TCTCAGTTCTTGATACCGGCAG 59.834 50.000 0.00 0.00 34.68 4.85
2561 3409 1.899814 TCAGTTCTTGATACCGGCAGT 59.100 47.619 0.00 0.00 0.00 4.40
2562 3410 2.301870 TCAGTTCTTGATACCGGCAGTT 59.698 45.455 0.00 0.00 0.00 3.16
2563 3411 2.416547 CAGTTCTTGATACCGGCAGTTG 59.583 50.000 0.00 0.00 0.00 3.16
2564 3412 1.737793 GTTCTTGATACCGGCAGTTGG 59.262 52.381 0.00 0.00 0.00 3.77
2565 3413 0.981183 TCTTGATACCGGCAGTTGGT 59.019 50.000 0.00 0.00 43.62 3.67
2566 3414 1.086696 CTTGATACCGGCAGTTGGTG 58.913 55.000 0.00 0.00 40.73 4.17
2567 3415 0.687920 TTGATACCGGCAGTTGGTGA 59.312 50.000 0.00 0.00 40.73 4.02
2568 3416 0.687920 TGATACCGGCAGTTGGTGAA 59.312 50.000 0.00 0.00 40.73 3.18
2569 3417 1.072489 TGATACCGGCAGTTGGTGAAA 59.928 47.619 0.00 0.00 40.73 2.69
2570 3418 2.156098 GATACCGGCAGTTGGTGAAAA 58.844 47.619 0.00 0.00 40.73 2.29
2571 3419 2.054232 TACCGGCAGTTGGTGAAAAA 57.946 45.000 0.00 0.00 40.73 1.94
2587 3435 3.921521 AAAAACCGGCGTTGGTGA 58.078 50.000 6.01 0.00 42.89 4.02
2588 3436 2.190756 AAAAACCGGCGTTGGTGAA 58.809 47.368 6.01 0.00 42.89 3.18
2589 3437 0.531200 AAAAACCGGCGTTGGTGAAA 59.469 45.000 6.01 0.00 42.89 2.69
2590 3438 0.531200 AAAACCGGCGTTGGTGAAAA 59.469 45.000 6.01 0.00 42.89 2.29
2591 3439 0.531200 AAACCGGCGTTGGTGAAAAA 59.469 45.000 6.01 0.00 42.89 1.94
2621 3469 9.768662 AATCATTTGATTTAGTTTGTTGCTCTT 57.231 25.926 0.00 0.00 41.64 2.85
2622 3470 8.801715 TCATTTGATTTAGTTTGTTGCTCTTC 57.198 30.769 0.00 0.00 0.00 2.87
2623 3471 8.412456 TCATTTGATTTAGTTTGTTGCTCTTCA 58.588 29.630 0.00 0.00 0.00 3.02
2624 3472 9.199982 CATTTGATTTAGTTTGTTGCTCTTCAT 57.800 29.630 0.00 0.00 0.00 2.57
2625 3473 9.768662 ATTTGATTTAGTTTGTTGCTCTTCATT 57.231 25.926 0.00 0.00 0.00 2.57
2627 3475 9.897744 TTGATTTAGTTTGTTGCTCTTCATTAG 57.102 29.630 0.00 0.00 0.00 1.73
2628 3476 8.023128 TGATTTAGTTTGTTGCTCTTCATTAGC 58.977 33.333 0.00 0.00 40.50 3.09
2634 3482 1.583556 TGCTCTTCATTAGCAGGGGA 58.416 50.000 0.00 0.00 44.78 4.81
2635 3483 1.915489 TGCTCTTCATTAGCAGGGGAA 59.085 47.619 0.00 0.00 44.78 3.97
2636 3484 2.308570 TGCTCTTCATTAGCAGGGGAAA 59.691 45.455 0.00 0.00 44.78 3.13
2637 3485 3.245229 TGCTCTTCATTAGCAGGGGAAAA 60.245 43.478 0.00 0.00 44.78 2.29
2638 3486 3.379688 GCTCTTCATTAGCAGGGGAAAAG 59.620 47.826 0.00 0.00 39.83 2.27
2639 3487 3.950395 CTCTTCATTAGCAGGGGAAAAGG 59.050 47.826 0.00 0.00 0.00 3.11
2640 3488 3.591527 TCTTCATTAGCAGGGGAAAAGGA 59.408 43.478 0.00 0.00 0.00 3.36
2641 3489 4.044065 TCTTCATTAGCAGGGGAAAAGGAA 59.956 41.667 0.00 0.00 0.00 3.36
2642 3490 4.608170 TCATTAGCAGGGGAAAAGGAAT 57.392 40.909 0.00 0.00 0.00 3.01
2643 3491 5.725551 TCATTAGCAGGGGAAAAGGAATA 57.274 39.130 0.00 0.00 0.00 1.75
2644 3492 6.279813 TCATTAGCAGGGGAAAAGGAATAT 57.720 37.500 0.00 0.00 0.00 1.28
2645 3493 6.306987 TCATTAGCAGGGGAAAAGGAATATC 58.693 40.000 0.00 0.00 0.00 1.63
2646 3494 5.994416 TTAGCAGGGGAAAAGGAATATCT 57.006 39.130 0.00 0.00 0.00 1.98
2647 3495 7.294720 TCATTAGCAGGGGAAAAGGAATATCTA 59.705 37.037 0.00 0.00 0.00 1.98
2648 3496 7.648177 TTAGCAGGGGAAAAGGAATATCTAT 57.352 36.000 0.00 0.00 0.00 1.98
2649 3497 6.133253 AGCAGGGGAAAAGGAATATCTATC 57.867 41.667 0.00 0.00 0.00 2.08
2650 3498 5.854481 AGCAGGGGAAAAGGAATATCTATCT 59.146 40.000 0.00 0.00 0.00 1.98
2651 3499 5.942826 GCAGGGGAAAAGGAATATCTATCTG 59.057 44.000 0.00 0.00 0.00 2.90
2652 3500 5.942826 CAGGGGAAAAGGAATATCTATCTGC 59.057 44.000 0.00 0.00 0.00 4.26
2653 3501 5.014649 AGGGGAAAAGGAATATCTATCTGCC 59.985 44.000 0.00 0.00 0.00 4.85
2654 3502 5.014649 GGGGAAAAGGAATATCTATCTGCCT 59.985 44.000 0.00 0.00 0.00 4.75
2655 3503 6.215636 GGGGAAAAGGAATATCTATCTGCCTA 59.784 42.308 0.00 0.00 0.00 3.93
2656 3504 7.334858 GGGAAAAGGAATATCTATCTGCCTAG 58.665 42.308 0.00 0.00 0.00 3.02
2657 3505 6.821160 GGAAAAGGAATATCTATCTGCCTAGC 59.179 42.308 0.00 0.00 0.00 3.42
2658 3506 7.310983 GGAAAAGGAATATCTATCTGCCTAGCT 60.311 40.741 0.00 0.00 0.00 3.32
2659 3507 7.566658 AAAGGAATATCTATCTGCCTAGCTT 57.433 36.000 0.00 0.00 0.00 3.74
2660 3508 7.566658 AAGGAATATCTATCTGCCTAGCTTT 57.433 36.000 0.00 0.00 0.00 3.51
2661 3509 6.945218 AGGAATATCTATCTGCCTAGCTTTG 58.055 40.000 0.00 0.00 0.00 2.77
2662 3510 6.070309 AGGAATATCTATCTGCCTAGCTTTGG 60.070 42.308 0.00 0.00 0.00 3.28
2663 3511 6.296145 GGAATATCTATCTGCCTAGCTTTGGT 60.296 42.308 0.00 0.00 0.00 3.67
2664 3512 7.093289 GGAATATCTATCTGCCTAGCTTTGGTA 60.093 40.741 0.00 0.00 0.00 3.25
2665 3513 5.736951 ATCTATCTGCCTAGCTTTGGTAG 57.263 43.478 14.40 14.40 38.42 3.18
2669 3517 4.844349 TCTGCCTAGCTTTGGTAGATTT 57.156 40.909 17.68 0.00 40.49 2.17
2670 3518 4.770795 TCTGCCTAGCTTTGGTAGATTTC 58.229 43.478 17.68 0.00 40.49 2.17
2671 3519 3.879892 CTGCCTAGCTTTGGTAGATTTCC 59.120 47.826 15.13 0.00 39.22 3.13
2672 3520 3.523564 TGCCTAGCTTTGGTAGATTTCCT 59.476 43.478 0.00 0.00 35.90 3.36
2673 3521 4.130857 GCCTAGCTTTGGTAGATTTCCTC 58.869 47.826 0.00 0.00 35.90 3.71
2674 3522 4.384208 GCCTAGCTTTGGTAGATTTCCTCA 60.384 45.833 0.00 0.00 35.90 3.86
2675 3523 5.745227 CCTAGCTTTGGTAGATTTCCTCAA 58.255 41.667 0.00 0.00 35.90 3.02
2676 3524 5.586643 CCTAGCTTTGGTAGATTTCCTCAAC 59.413 44.000 0.00 0.00 35.90 3.18
2677 3525 4.336280 AGCTTTGGTAGATTTCCTCAACC 58.664 43.478 0.00 0.00 0.00 3.77
2678 3526 3.444034 GCTTTGGTAGATTTCCTCAACCC 59.556 47.826 0.00 0.00 0.00 4.11
2679 3527 4.662278 CTTTGGTAGATTTCCTCAACCCA 58.338 43.478 0.00 0.00 0.00 4.51
2680 3528 4.733077 TTGGTAGATTTCCTCAACCCAA 57.267 40.909 0.00 0.00 0.00 4.12
2681 3529 4.733077 TGGTAGATTTCCTCAACCCAAA 57.267 40.909 0.00 0.00 0.00 3.28
2682 3530 5.269554 TGGTAGATTTCCTCAACCCAAAT 57.730 39.130 0.00 0.00 0.00 2.32
2683 3531 5.016173 TGGTAGATTTCCTCAACCCAAATG 58.984 41.667 0.00 0.00 0.00 2.32
2684 3532 5.222233 TGGTAGATTTCCTCAACCCAAATGA 60.222 40.000 0.00 0.00 0.00 2.57
2685 3533 5.714806 GGTAGATTTCCTCAACCCAAATGAA 59.285 40.000 0.00 0.00 0.00 2.57
2686 3534 6.210584 GGTAGATTTCCTCAACCCAAATGAAA 59.789 38.462 0.00 0.00 0.00 2.69
2687 3535 6.745794 AGATTTCCTCAACCCAAATGAAAA 57.254 33.333 0.00 0.00 0.00 2.29
2688 3536 7.135591 AGATTTCCTCAACCCAAATGAAAAA 57.864 32.000 0.00 0.00 0.00 1.94
2689 3537 6.992123 AGATTTCCTCAACCCAAATGAAAAAC 59.008 34.615 0.00 0.00 0.00 2.43
2690 3538 5.683876 TTCCTCAACCCAAATGAAAAACA 57.316 34.783 0.00 0.00 0.00 2.83
2691 3539 5.683876 TCCTCAACCCAAATGAAAAACAA 57.316 34.783 0.00 0.00 0.00 2.83
2692 3540 6.054860 TCCTCAACCCAAATGAAAAACAAA 57.945 33.333 0.00 0.00 0.00 2.83
2693 3541 6.476378 TCCTCAACCCAAATGAAAAACAAAA 58.524 32.000 0.00 0.00 0.00 2.44
2694 3542 6.942576 TCCTCAACCCAAATGAAAAACAAAAA 59.057 30.769 0.00 0.00 0.00 1.94
2695 3543 7.613411 TCCTCAACCCAAATGAAAAACAAAAAT 59.387 29.630 0.00 0.00 0.00 1.82
2696 3544 8.249638 CCTCAACCCAAATGAAAAACAAAAATT 58.750 29.630 0.00 0.00 0.00 1.82
2697 3545 9.288124 CTCAACCCAAATGAAAAACAAAAATTC 57.712 29.630 0.00 0.00 0.00 2.17
2698 3546 9.018582 TCAACCCAAATGAAAAACAAAAATTCT 57.981 25.926 0.00 0.00 0.00 2.40
2699 3547 9.074443 CAACCCAAATGAAAAACAAAAATTCTG 57.926 29.630 0.00 0.00 0.00 3.02
2700 3548 8.572855 ACCCAAATGAAAAACAAAAATTCTGA 57.427 26.923 0.00 0.00 0.00 3.27
2701 3549 8.676401 ACCCAAATGAAAAACAAAAATTCTGAG 58.324 29.630 0.00 0.00 0.00 3.35
2702 3550 8.891720 CCCAAATGAAAAACAAAAATTCTGAGA 58.108 29.630 0.00 0.00 0.00 3.27
2714 3562 9.918630 ACAAAAATTCTGAGAATTTATGAGGTG 57.081 29.630 27.66 20.22 30.38 4.00
2715 3563 9.362539 CAAAAATTCTGAGAATTTATGAGGTGG 57.637 33.333 27.66 9.84 30.38 4.61
2716 3564 8.884124 AAAATTCTGAGAATTTATGAGGTGGA 57.116 30.769 27.66 0.00 30.38 4.02
2717 3565 9.484806 AAAATTCTGAGAATTTATGAGGTGGAT 57.515 29.630 27.66 10.07 30.38 3.41
2720 3568 9.790344 ATTCTGAGAATTTATGAGGTGGATAAG 57.210 33.333 0.97 0.00 0.00 1.73
2721 3569 8.324191 TCTGAGAATTTATGAGGTGGATAAGT 57.676 34.615 0.00 0.00 0.00 2.24
2722 3570 8.424918 TCTGAGAATTTATGAGGTGGATAAGTC 58.575 37.037 0.00 0.00 0.00 3.01
2723 3571 7.509546 TGAGAATTTATGAGGTGGATAAGTCC 58.490 38.462 0.00 0.00 45.31 3.85
2736 3584 3.268986 AGTCCGACGACTCAGCAG 58.731 61.111 0.00 0.00 46.90 4.24
2737 3585 1.601197 AGTCCGACGACTCAGCAGT 60.601 57.895 0.00 0.00 46.90 4.40
2738 3586 0.321387 AGTCCGACGACTCAGCAGTA 60.321 55.000 0.00 0.00 46.90 2.74
2739 3587 0.097325 GTCCGACGACTCAGCAGTAG 59.903 60.000 0.00 0.00 35.99 2.57
2740 3588 0.321387 TCCGACGACTCAGCAGTAGT 60.321 55.000 0.00 0.00 40.86 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 29 9.968870 GTTGTATGGGTTGTTTATTTTGTAAGA 57.031 29.630 0.00 0.00 0.00 2.10
28 30 9.751542 TGTTGTATGGGTTGTTTATTTTGTAAG 57.248 29.630 0.00 0.00 0.00 2.34
31 33 9.620259 ATTTGTTGTATGGGTTGTTTATTTTGT 57.380 25.926 0.00 0.00 0.00 2.83
36 38 9.796120 CGAATATTTGTTGTATGGGTTGTTTAT 57.204 29.630 0.00 0.00 0.00 1.40
79 81 6.072112 TCGGAGACTTTCAAAAGAATTTGG 57.928 37.500 9.39 0.00 44.88 3.28
80 82 6.142958 GCTTCGGAGACTTTCAAAAGAATTTG 59.857 38.462 9.39 0.00 41.64 2.32
81 83 6.209361 GCTTCGGAGACTTTCAAAAGAATTT 58.791 36.000 9.39 0.00 36.05 1.82
86 88 2.800544 TCGCTTCGGAGACTTTCAAAAG 59.199 45.455 0.00 0.97 41.73 2.27
90 92 1.611977 TCTTCGCTTCGGAGACTTTCA 59.388 47.619 0.00 0.00 36.49 2.69
99 101 1.801913 CACGGTCTCTTCGCTTCGG 60.802 63.158 0.00 0.00 0.00 4.30
100 102 0.794981 CTCACGGTCTCTTCGCTTCG 60.795 60.000 0.00 0.00 0.00 3.79
130 132 2.694397 TGCTCTTACTCCCATAGGCAT 58.306 47.619 0.00 0.00 0.00 4.40
138 140 1.069978 GCTCAGGATGCTCTTACTCCC 59.930 57.143 0.00 0.00 34.76 4.30
142 144 2.977772 ACTGCTCAGGATGCTCTTAC 57.022 50.000 1.66 0.00 34.76 2.34
153 155 2.569404 AGAGGTTTAGGGAACTGCTCAG 59.431 50.000 0.00 0.00 43.88 3.35
154 156 2.567615 GAGAGGTTTAGGGAACTGCTCA 59.432 50.000 0.00 0.00 43.88 4.26
160 162 2.239150 GGGGAAGAGAGGTTTAGGGAAC 59.761 54.545 0.00 0.00 37.53 3.62
169 171 1.132689 ACACTCAAGGGGAAGAGAGGT 60.133 52.381 0.00 0.00 35.83 3.85
172 174 6.070194 CCTTAAATACACTCAAGGGGAAGAGA 60.070 42.308 0.00 0.00 35.01 3.10
173 175 6.116126 CCTTAAATACACTCAAGGGGAAGAG 58.884 44.000 0.00 0.00 35.01 2.85
174 176 6.062258 CCTTAAATACACTCAAGGGGAAGA 57.938 41.667 0.00 0.00 35.01 2.87
181 183 6.881602 AGAAAGAGCCCTTAAATACACTCAAG 59.118 38.462 0.00 0.00 31.15 3.02
219 221 1.581934 GGCCGTATACCCGTAAAACC 58.418 55.000 0.00 0.00 0.00 3.27
224 226 2.124060 TTGCGGCCGTATACCCGTA 61.124 57.895 28.70 12.99 45.98 4.02
231 233 1.743995 GGAGTTGTTGCGGCCGTAT 60.744 57.895 28.70 6.48 0.00 3.06
238 240 1.265905 GTTTGTAGGGGAGTTGTTGCG 59.734 52.381 0.00 0.00 0.00 4.85
240 242 3.146847 GAGGTTTGTAGGGGAGTTGTTG 58.853 50.000 0.00 0.00 0.00 3.33
242 244 2.702748 AGAGGTTTGTAGGGGAGTTGT 58.297 47.619 0.00 0.00 0.00 3.32
243 245 3.790089 AAGAGGTTTGTAGGGGAGTTG 57.210 47.619 0.00 0.00 0.00 3.16
246 248 2.642807 TGGAAAGAGGTTTGTAGGGGAG 59.357 50.000 0.00 0.00 0.00 4.30
250 252 6.996282 TCTTAGTTTGGAAAGAGGTTTGTAGG 59.004 38.462 0.00 0.00 0.00 3.18
253 255 7.559897 TCAATCTTAGTTTGGAAAGAGGTTTGT 59.440 33.333 3.57 0.00 35.32 2.83
254 256 7.862873 GTCAATCTTAGTTTGGAAAGAGGTTTG 59.137 37.037 3.57 0.00 35.32 2.93
264 266 6.061441 ACACATGTGTCAATCTTAGTTTGGA 58.939 36.000 25.76 0.00 40.24 3.53
282 284 2.932622 GCACTGACAGGTAGGACACATG 60.933 54.545 7.51 0.00 44.55 3.21
292 294 1.595382 GAGCGTTGCACTGACAGGT 60.595 57.895 7.51 0.00 0.00 4.00
293 295 1.287730 GAGAGCGTTGCACTGACAGG 61.288 60.000 7.51 0.00 28.14 4.00
324 350 1.519455 GTCGCCGAGGTCTTCCATG 60.519 63.158 0.00 0.00 35.89 3.66
337 363 2.586357 GGAGCTTCATCGGTCGCC 60.586 66.667 0.00 0.00 32.39 5.54
387 431 3.941836 GTTATCGCCGCTGCTGCC 61.942 66.667 10.48 0.00 35.36 4.85
390 434 1.889105 CCATGTTATCGCCGCTGCT 60.889 57.895 0.00 0.00 34.43 4.24
393 437 1.523711 CACCCATGTTATCGCCGCT 60.524 57.895 0.00 0.00 0.00 5.52
399 443 1.157870 CGCCGGACACCCATGTTATC 61.158 60.000 5.05 0.00 39.95 1.75
400 444 1.153249 CGCCGGACACCCATGTTAT 60.153 57.895 5.05 0.00 39.95 1.89
401 445 2.266372 CGCCGGACACCCATGTTA 59.734 61.111 5.05 0.00 39.95 2.41
402 446 4.715523 CCGCCGGACACCCATGTT 62.716 66.667 5.05 0.00 39.95 2.71
407 451 3.912745 AAATGACCGCCGGACACCC 62.913 63.158 11.71 0.00 29.43 4.61
408 452 2.359478 AAATGACCGCCGGACACC 60.359 61.111 11.71 0.00 29.43 4.16
418 462 3.419759 ACGTCGCCGCAAATGACC 61.420 61.111 0.00 0.00 37.70 4.02
434 478 1.785041 AACACATGCCACGTCAGCAC 61.785 55.000 11.74 0.00 44.40 4.40
435 479 1.525765 AACACATGCCACGTCAGCA 60.526 52.632 11.88 11.88 45.94 4.41
436 480 1.081906 CAACACATGCCACGTCAGC 60.082 57.895 0.00 0.04 0.00 4.26
483 527 7.036220 CGATGCTTCTCTTCTAGAGGTAAAAA 58.964 38.462 1.31 0.00 42.54 1.94
484 528 6.565234 CGATGCTTCTCTTCTAGAGGTAAAA 58.435 40.000 1.31 0.00 42.54 1.52
485 529 5.450688 GCGATGCTTCTCTTCTAGAGGTAAA 60.451 44.000 1.31 0.00 42.54 2.01
486 530 4.036971 GCGATGCTTCTCTTCTAGAGGTAA 59.963 45.833 1.31 0.00 42.54 2.85
487 531 3.566322 GCGATGCTTCTCTTCTAGAGGTA 59.434 47.826 1.31 0.00 42.54 3.08
488 532 2.360801 GCGATGCTTCTCTTCTAGAGGT 59.639 50.000 1.31 0.00 42.54 3.85
489 533 2.622942 AGCGATGCTTCTCTTCTAGAGG 59.377 50.000 4.03 0.00 42.54 3.69
490 534 3.988379 AGCGATGCTTCTCTTCTAGAG 57.012 47.619 0.00 0.00 43.64 2.43
502 546 3.494048 CCTCCAATAGAAGAAGCGATGCT 60.494 47.826 0.00 0.00 42.56 3.79
503 547 2.805099 CCTCCAATAGAAGAAGCGATGC 59.195 50.000 0.00 0.00 0.00 3.91
504 548 3.397482 CCCTCCAATAGAAGAAGCGATG 58.603 50.000 0.00 0.00 0.00 3.84
505 549 2.370189 CCCCTCCAATAGAAGAAGCGAT 59.630 50.000 0.00 0.00 0.00 4.58
506 550 1.762957 CCCCTCCAATAGAAGAAGCGA 59.237 52.381 0.00 0.00 0.00 4.93
520 564 2.586648 AAAACACTCATCACCCCTCC 57.413 50.000 0.00 0.00 0.00 4.30
556 601 5.828328 AGTTGAGACCCTAAACCAAAGAAAG 59.172 40.000 0.00 0.00 0.00 2.62
558 603 5.382664 AGTTGAGACCCTAAACCAAAGAA 57.617 39.130 0.00 0.00 0.00 2.52
560 605 5.377478 AGAAGTTGAGACCCTAAACCAAAG 58.623 41.667 0.00 0.00 0.00 2.77
564 609 4.893829 AGAGAAGTTGAGACCCTAAACC 57.106 45.455 0.00 0.00 0.00 3.27
565 610 7.701501 CGTATAAGAGAAGTTGAGACCCTAAAC 59.298 40.741 0.00 0.00 0.00 2.01
566 611 7.395489 ACGTATAAGAGAAGTTGAGACCCTAAA 59.605 37.037 0.00 0.00 0.00 1.85
567 612 6.888632 ACGTATAAGAGAAGTTGAGACCCTAA 59.111 38.462 0.00 0.00 0.00 2.69
568 613 6.318144 CACGTATAAGAGAAGTTGAGACCCTA 59.682 42.308 0.00 0.00 0.00 3.53
569 614 5.125739 CACGTATAAGAGAAGTTGAGACCCT 59.874 44.000 0.00 0.00 0.00 4.34
570 615 5.105837 ACACGTATAAGAGAAGTTGAGACCC 60.106 44.000 0.00 0.00 0.00 4.46
571 616 5.952033 ACACGTATAAGAGAAGTTGAGACC 58.048 41.667 0.00 0.00 0.00 3.85
605 677 7.340999 AGAAAATACACATATAGCCCCGTTTTT 59.659 33.333 0.00 0.00 0.00 1.94
630 702 9.197694 CTTATTGAAACATCTCCGGTCTATTAG 57.802 37.037 0.00 0.00 0.00 1.73
639 734 4.446371 AGCCTCTTATTGAAACATCTCCG 58.554 43.478 0.00 0.00 0.00 4.63
653 748 8.319146 CGGGGATATTTATAAAAGAGCCTCTTA 58.681 37.037 7.53 0.00 35.27 2.10
654 749 7.168905 CGGGGATATTTATAAAAGAGCCTCTT 58.831 38.462 0.00 0.00 38.59 2.85
655 750 6.712276 CGGGGATATTTATAAAAGAGCCTCT 58.288 40.000 13.06 0.00 0.00 3.69
656 751 5.354513 GCGGGGATATTTATAAAAGAGCCTC 59.645 44.000 14.15 10.90 0.00 4.70
657 752 5.222048 TGCGGGGATATTTATAAAAGAGCCT 60.222 40.000 14.15 0.00 0.00 4.58
658 753 5.007682 TGCGGGGATATTTATAAAAGAGCC 58.992 41.667 1.21 5.70 0.00 4.70
659 754 6.569179 TTGCGGGGATATTTATAAAAGAGC 57.431 37.500 1.21 2.85 0.00 4.09
744 839 0.039764 TGTGGGTCTCGTCCTCATCT 59.960 55.000 0.00 0.00 0.00 2.90
750 845 1.327690 TATGGCTGTGGGTCTCGTCC 61.328 60.000 0.00 0.00 0.00 4.79
751 846 0.753262 ATATGGCTGTGGGTCTCGTC 59.247 55.000 0.00 0.00 0.00 4.20
887 984 1.886542 GAGGGTCTTGGATTGCGTTTT 59.113 47.619 0.00 0.00 0.00 2.43
899 996 1.550976 GATCGTGTTGGAGAGGGTCTT 59.449 52.381 0.00 0.00 0.00 3.01
1017 1121 2.879103 TGGGGAACTTGAAGTGGATC 57.121 50.000 0.00 0.00 0.00 3.36
1018 1122 3.611025 TTTGGGGAACTTGAAGTGGAT 57.389 42.857 0.00 0.00 0.00 3.41
1079 1189 0.179176 CTCCTGCTTCTCGTCGACTG 60.179 60.000 14.70 7.51 0.00 3.51
1093 1206 1.372748 GCGCCATCGATCTCTCCTG 60.373 63.158 0.00 0.00 38.10 3.86
1532 1877 3.508840 CCGGCGATGGAAGTTGCC 61.509 66.667 9.30 0.00 43.93 4.52
1565 1910 1.208358 CGACGAACGGACAGCTACA 59.792 57.895 0.00 0.00 38.46 2.74
1566 1911 2.150837 GCGACGAACGGACAGCTAC 61.151 63.158 0.00 0.00 42.83 3.58
1567 1912 2.177531 GCGACGAACGGACAGCTA 59.822 61.111 0.00 0.00 42.83 3.32
1645 2085 9.439500 TTGTAACTATGTAACCAACCAGAATAC 57.561 33.333 0.00 0.00 0.00 1.89
1684 2125 7.173218 CACAAGCCAACCATATAGACGAAATAT 59.827 37.037 0.00 0.00 0.00 1.28
1772 2215 5.916318 ACAGCAAAATTCAACAGGATCAAA 58.084 33.333 0.00 0.00 0.00 2.69
1773 2216 5.509501 GGACAGCAAAATTCAACAGGATCAA 60.510 40.000 0.00 0.00 0.00 2.57
1774 2217 4.022068 GGACAGCAAAATTCAACAGGATCA 60.022 41.667 0.00 0.00 0.00 2.92
1775 2218 4.219288 AGGACAGCAAAATTCAACAGGATC 59.781 41.667 0.00 0.00 0.00 3.36
1776 2219 4.021719 CAGGACAGCAAAATTCAACAGGAT 60.022 41.667 0.00 0.00 0.00 3.24
1810 2275 1.101049 AAACGGCACCACACCAAGAG 61.101 55.000 0.00 0.00 0.00 2.85
1835 2311 1.375396 CCGCAACACAGGAATCCGA 60.375 57.895 0.00 0.00 0.00 4.55
1838 2314 0.951558 AACACCGCAACACAGGAATC 59.048 50.000 0.00 0.00 0.00 2.52
1843 2319 0.583438 CTCTCAACACCGCAACACAG 59.417 55.000 0.00 0.00 0.00 3.66
1844 2320 0.176910 TCTCTCAACACCGCAACACA 59.823 50.000 0.00 0.00 0.00 3.72
1847 2323 3.626028 AAATTCTCTCAACACCGCAAC 57.374 42.857 0.00 0.00 0.00 4.17
1919 2519 1.136474 TGCGTGTCTTTTATGTTCGCG 60.136 47.619 0.00 0.00 44.02 5.87
1936 2536 4.969196 AGTGGTGGTCGTGCTGCG 62.969 66.667 0.00 0.00 43.01 5.18
1946 2546 6.151144 CCCAGAAAAGTTAAGATAAGTGGTGG 59.849 42.308 0.00 0.00 0.00 4.61
1949 2549 5.163754 CGCCCAGAAAAGTTAAGATAAGTGG 60.164 44.000 0.00 0.00 0.00 4.00
1952 2552 5.064834 GGTCGCCCAGAAAAGTTAAGATAAG 59.935 44.000 0.00 0.00 0.00 1.73
1953 2553 4.939439 GGTCGCCCAGAAAAGTTAAGATAA 59.061 41.667 0.00 0.00 0.00 1.75
1954 2554 4.224370 AGGTCGCCCAGAAAAGTTAAGATA 59.776 41.667 0.00 0.00 0.00 1.98
1957 2805 2.779506 AGGTCGCCCAGAAAAGTTAAG 58.220 47.619 0.00 0.00 0.00 1.85
1958 2806 2.943036 AGGTCGCCCAGAAAAGTTAA 57.057 45.000 0.00 0.00 0.00 2.01
1994 2842 6.420604 CGGTATCAAAACTGCAACAGAAAATT 59.579 34.615 0.78 0.00 35.18 1.82
2003 2851 3.880490 AGTGAACGGTATCAAAACTGCAA 59.120 39.130 0.00 0.00 0.00 4.08
2004 2852 3.472652 AGTGAACGGTATCAAAACTGCA 58.527 40.909 0.00 0.00 0.00 4.41
2047 2895 1.231958 TGTTCACCAAATCCGCGTCC 61.232 55.000 4.92 0.00 0.00 4.79
2048 2896 0.802494 ATGTTCACCAAATCCGCGTC 59.198 50.000 4.92 0.00 0.00 5.19
2049 2897 0.521291 CATGTTCACCAAATCCGCGT 59.479 50.000 4.92 0.00 0.00 6.01
2050 2898 0.179166 CCATGTTCACCAAATCCGCG 60.179 55.000 0.00 0.00 0.00 6.46
2051 2899 0.173255 CCCATGTTCACCAAATCCGC 59.827 55.000 0.00 0.00 0.00 5.54
2052 2900 1.202114 CACCCATGTTCACCAAATCCG 59.798 52.381 0.00 0.00 0.00 4.18
2053 2901 1.066929 GCACCCATGTTCACCAAATCC 60.067 52.381 0.00 0.00 0.00 3.01
2054 2902 1.402720 CGCACCCATGTTCACCAAATC 60.403 52.381 0.00 0.00 0.00 2.17
2055 2903 0.602562 CGCACCCATGTTCACCAAAT 59.397 50.000 0.00 0.00 0.00 2.32
2056 2904 2.037053 CGCACCCATGTTCACCAAA 58.963 52.632 0.00 0.00 0.00 3.28
2057 2905 2.560119 GCGCACCCATGTTCACCAA 61.560 57.895 0.30 0.00 0.00 3.67
2058 2906 2.983030 GCGCACCCATGTTCACCA 60.983 61.111 0.30 0.00 0.00 4.17
2059 2907 4.101790 CGCGCACCCATGTTCACC 62.102 66.667 8.75 0.00 0.00 4.02
2060 2908 4.759096 GCGCGCACCCATGTTCAC 62.759 66.667 29.10 0.00 0.00 3.18
2069 2917 0.028902 CTATTTAAAGGGCGCGCACC 59.971 55.000 32.95 28.45 0.00 5.01
2070 2918 0.730840 ACTATTTAAAGGGCGCGCAC 59.269 50.000 34.42 32.15 0.00 5.34
2071 2919 2.312722 TACTATTTAAAGGGCGCGCA 57.687 45.000 34.42 11.01 0.00 6.09
2072 2920 3.678915 TTTACTATTTAAAGGGCGCGC 57.321 42.857 25.94 25.94 0.00 6.86
2073 2921 7.632721 TCTAAATTTACTATTTAAAGGGCGCG 58.367 34.615 0.00 0.00 0.00 6.86
2074 2922 9.791820 TTTCTAAATTTACTATTTAAAGGGCGC 57.208 29.630 0.00 0.00 0.00 6.53
2141 2989 9.431887 CAAGTATACCGGTTTGCTATGTATATT 57.568 33.333 15.04 0.00 29.87 1.28
2142 2990 7.548075 GCAAGTATACCGGTTTGCTATGTATAT 59.452 37.037 26.91 8.56 41.89 0.86
2143 2991 6.869913 GCAAGTATACCGGTTTGCTATGTATA 59.130 38.462 26.91 8.77 41.89 1.47
2144 2992 5.699458 GCAAGTATACCGGTTTGCTATGTAT 59.301 40.000 26.91 9.70 41.89 2.29
2145 2993 5.051816 GCAAGTATACCGGTTTGCTATGTA 58.948 41.667 26.91 2.51 41.89 2.29
2146 2994 3.875134 GCAAGTATACCGGTTTGCTATGT 59.125 43.478 26.91 7.13 41.89 2.29
2147 2995 3.874543 TGCAAGTATACCGGTTTGCTATG 59.125 43.478 31.23 22.59 44.59 2.23
2148 2996 4.145365 TGCAAGTATACCGGTTTGCTAT 57.855 40.909 31.23 15.73 44.59 2.97
2149 2997 3.613494 TGCAAGTATACCGGTTTGCTA 57.387 42.857 31.23 19.96 44.59 3.49
2150 2998 2.483014 TGCAAGTATACCGGTTTGCT 57.517 45.000 31.23 22.47 44.59 3.91
2151 2999 4.513692 TCATATGCAAGTATACCGGTTTGC 59.486 41.667 27.28 27.28 44.56 3.68
2152 3000 6.260050 ACTTCATATGCAAGTATACCGGTTTG 59.740 38.462 15.04 12.90 32.08 2.93
2153 3001 6.354130 ACTTCATATGCAAGTATACCGGTTT 58.646 36.000 15.04 7.86 32.08 3.27
2154 3002 5.925509 ACTTCATATGCAAGTATACCGGTT 58.074 37.500 15.04 3.05 32.08 4.44
2155 3003 5.546621 ACTTCATATGCAAGTATACCGGT 57.453 39.130 13.98 13.98 32.08 5.28
2156 3004 6.481976 TGAAACTTCATATGCAAGTATACCGG 59.518 38.462 16.08 0.00 32.71 5.28
2157 3005 7.345192 GTGAAACTTCATATGCAAGTATACCG 58.655 38.462 16.08 0.00 39.73 4.02
2158 3006 7.223971 TCGTGAAACTTCATATGCAAGTATACC 59.776 37.037 16.08 9.41 39.73 2.73
2159 3007 8.126871 TCGTGAAACTTCATATGCAAGTATAC 57.873 34.615 16.08 14.09 39.73 1.47
2160 3008 8.710835 TTCGTGAAACTTCATATGCAAGTATA 57.289 30.769 16.08 7.37 39.73 1.47
2161 3009 7.549134 TCTTCGTGAAACTTCATATGCAAGTAT 59.451 33.333 16.08 8.03 39.73 2.12
2162 3010 6.871492 TCTTCGTGAAACTTCATATGCAAGTA 59.129 34.615 16.08 4.12 39.73 2.24
2163 3011 5.700832 TCTTCGTGAAACTTCATATGCAAGT 59.299 36.000 12.15 12.15 39.73 3.16
2164 3012 6.169419 TCTTCGTGAAACTTCATATGCAAG 57.831 37.500 0.00 5.71 39.73 4.01
2165 3013 6.552859 TTCTTCGTGAAACTTCATATGCAA 57.447 33.333 0.00 0.00 39.73 4.08
2166 3014 6.552859 TTTCTTCGTGAAACTTCATATGCA 57.447 33.333 0.00 0.00 39.50 3.96
2167 3015 7.217070 GTGATTTCTTCGTGAAACTTCATATGC 59.783 37.037 0.00 0.00 46.08 3.14
2168 3016 8.229811 TGTGATTTCTTCGTGAAACTTCATATG 58.770 33.333 0.00 0.00 46.08 1.78
2169 3017 8.322906 TGTGATTTCTTCGTGAAACTTCATAT 57.677 30.769 8.09 0.00 46.08 1.78
2170 3018 7.722795 TGTGATTTCTTCGTGAAACTTCATA 57.277 32.000 8.09 5.90 46.08 2.15
2171 3019 6.618287 TGTGATTTCTTCGTGAAACTTCAT 57.382 33.333 8.09 0.00 46.08 2.57
2172 3020 6.128145 TGTTGTGATTTCTTCGTGAAACTTCA 60.128 34.615 8.09 7.01 46.08 3.02
2173 3021 6.255215 TGTTGTGATTTCTTCGTGAAACTTC 58.745 36.000 8.09 5.07 46.08 3.01
2174 3022 6.128007 ACTGTTGTGATTTCTTCGTGAAACTT 60.128 34.615 8.09 0.00 46.08 2.66
2175 3023 5.354234 ACTGTTGTGATTTCTTCGTGAAACT 59.646 36.000 8.09 0.78 46.08 2.66
2176 3024 5.452302 CACTGTTGTGATTTCTTCGTGAAAC 59.548 40.000 8.09 4.80 46.55 2.78
2177 3025 5.448496 CCACTGTTGTGATTTCTTCGTGAAA 60.448 40.000 8.30 8.30 46.55 2.69
2178 3026 4.035091 CCACTGTTGTGATTTCTTCGTGAA 59.965 41.667 0.00 0.00 46.55 3.18
2179 3027 3.559655 CCACTGTTGTGATTTCTTCGTGA 59.440 43.478 0.00 0.00 46.55 4.35
2180 3028 3.312421 ACCACTGTTGTGATTTCTTCGTG 59.688 43.478 0.00 0.00 46.55 4.35
2181 3029 3.541632 ACCACTGTTGTGATTTCTTCGT 58.458 40.909 0.00 0.00 46.55 3.85
2182 3030 5.666969 TTACCACTGTTGTGATTTCTTCG 57.333 39.130 0.00 0.00 46.55 3.79
2183 3031 8.134895 TCATTTTACCACTGTTGTGATTTCTTC 58.865 33.333 0.00 0.00 46.55 2.87
2184 3032 8.006298 TCATTTTACCACTGTTGTGATTTCTT 57.994 30.769 0.00 0.00 46.55 2.52
2185 3033 7.581213 TCATTTTACCACTGTTGTGATTTCT 57.419 32.000 0.00 0.00 46.55 2.52
2186 3034 9.906660 TTATCATTTTACCACTGTTGTGATTTC 57.093 29.630 0.00 0.00 46.55 2.17
2190 3038 9.906660 GATTTTATCATTTTACCACTGTTGTGA 57.093 29.630 0.00 0.00 46.55 3.58
2191 3039 9.689976 TGATTTTATCATTTTACCACTGTTGTG 57.310 29.630 0.00 0.00 37.89 3.33
2232 3080 8.879759 CGACCATACTATTCATTAAACAGTGTT 58.120 33.333 1.64 1.64 0.00 3.32
2233 3081 8.255206 TCGACCATACTATTCATTAAACAGTGT 58.745 33.333 0.00 0.00 0.00 3.55
2234 3082 8.642908 TCGACCATACTATTCATTAAACAGTG 57.357 34.615 0.00 0.00 0.00 3.66
2235 3083 9.832445 ATTCGACCATACTATTCATTAAACAGT 57.168 29.630 0.00 0.00 0.00 3.55
2269 3117 7.844009 ACACCCACGATATTTCTAGTAAAGAA 58.156 34.615 0.00 0.00 42.62 2.52
2270 3118 7.123098 TGACACCCACGATATTTCTAGTAAAGA 59.877 37.037 0.00 0.00 0.00 2.52
2271 3119 7.262772 TGACACCCACGATATTTCTAGTAAAG 58.737 38.462 0.00 0.00 0.00 1.85
2272 3120 7.172868 TGACACCCACGATATTTCTAGTAAA 57.827 36.000 0.00 0.00 0.00 2.01
2273 3121 6.778834 TGACACCCACGATATTTCTAGTAA 57.221 37.500 0.00 0.00 0.00 2.24
2274 3122 6.778834 TTGACACCCACGATATTTCTAGTA 57.221 37.500 0.00 0.00 0.00 1.82
2275 3123 5.670792 TTGACACCCACGATATTTCTAGT 57.329 39.130 0.00 0.00 0.00 2.57
2276 3124 7.207383 TGTATTGACACCCACGATATTTCTAG 58.793 38.462 0.00 0.00 0.00 2.43
2277 3125 7.114866 TGTATTGACACCCACGATATTTCTA 57.885 36.000 0.00 0.00 0.00 2.10
2278 3126 5.984725 TGTATTGACACCCACGATATTTCT 58.015 37.500 0.00 0.00 0.00 2.52
2279 3127 6.481976 TGATGTATTGACACCCACGATATTTC 59.518 38.462 0.00 0.00 38.76 2.17
2280 3128 6.353323 TGATGTATTGACACCCACGATATTT 58.647 36.000 0.00 0.00 38.76 1.40
2281 3129 5.924356 TGATGTATTGACACCCACGATATT 58.076 37.500 0.00 0.00 38.76 1.28
2282 3130 5.545063 TGATGTATTGACACCCACGATAT 57.455 39.130 0.00 0.00 38.76 1.63
2283 3131 5.069781 TCATGATGTATTGACACCCACGATA 59.930 40.000 0.00 0.00 38.76 2.92
2284 3132 3.904800 TGATGTATTGACACCCACGAT 57.095 42.857 0.00 0.00 38.76 3.73
2285 3133 3.196685 TCATGATGTATTGACACCCACGA 59.803 43.478 0.00 0.00 38.76 4.35
2286 3134 3.530535 TCATGATGTATTGACACCCACG 58.469 45.455 0.00 0.00 38.76 4.94
2287 3135 5.415701 AGTTTCATGATGTATTGACACCCAC 59.584 40.000 0.00 0.00 38.76 4.61
2288 3136 5.569355 AGTTTCATGATGTATTGACACCCA 58.431 37.500 0.00 0.00 38.76 4.51
2289 3137 6.150976 TGAAGTTTCATGATGTATTGACACCC 59.849 38.462 0.00 0.00 33.08 4.61
2290 3138 7.023575 GTGAAGTTTCATGATGTATTGACACC 58.976 38.462 0.00 0.00 37.74 4.16
2291 3139 7.535258 GTGTGAAGTTTCATGATGTATTGACAC 59.465 37.037 13.25 13.25 37.74 3.67
2292 3140 7.571059 CGTGTGAAGTTTCATGATGTATTGACA 60.571 37.037 0.00 0.00 39.73 3.58
2293 3141 6.738200 CGTGTGAAGTTTCATGATGTATTGAC 59.262 38.462 0.00 0.00 39.73 3.18
2294 3142 6.426633 ACGTGTGAAGTTTCATGATGTATTGA 59.573 34.615 0.00 0.00 39.73 2.57
2295 3143 6.520790 CACGTGTGAAGTTTCATGATGTATTG 59.479 38.462 7.58 0.00 39.73 1.90
2296 3144 6.204688 ACACGTGTGAAGTTTCATGATGTATT 59.795 34.615 22.71 0.00 39.73 1.89
2297 3145 5.700832 ACACGTGTGAAGTTTCATGATGTAT 59.299 36.000 22.71 0.00 39.73 2.29
2298 3146 5.053811 ACACGTGTGAAGTTTCATGATGTA 58.946 37.500 22.71 0.00 39.73 2.29
2299 3147 3.876914 ACACGTGTGAAGTTTCATGATGT 59.123 39.130 22.71 0.00 39.73 3.06
2300 3148 4.472691 ACACGTGTGAAGTTTCATGATG 57.527 40.909 22.71 0.00 39.73 3.07
2314 3162 8.821147 TTTAGTAGATCATTTTACACACGTGT 57.179 30.769 17.22 17.22 46.87 4.49
2384 3232 7.863375 CACCCACGTGAATAGTAAATTCAAAAA 59.137 33.333 19.30 0.00 43.14 1.94
2385 3233 7.364200 CACCCACGTGAATAGTAAATTCAAAA 58.636 34.615 19.30 0.00 43.14 2.44
2386 3234 6.568844 GCACCCACGTGAATAGTAAATTCAAA 60.569 38.462 19.30 0.00 43.14 2.69
2387 3235 5.106475 GCACCCACGTGAATAGTAAATTCAA 60.106 40.000 19.30 0.00 43.14 2.69
2388 3236 4.393680 GCACCCACGTGAATAGTAAATTCA 59.606 41.667 19.30 0.00 43.14 2.57
2389 3237 4.493545 CGCACCCACGTGAATAGTAAATTC 60.494 45.833 19.30 0.00 43.14 2.17
2390 3238 3.372822 CGCACCCACGTGAATAGTAAATT 59.627 43.478 19.30 0.00 43.14 1.82
2391 3239 2.933906 CGCACCCACGTGAATAGTAAAT 59.066 45.455 19.30 0.00 43.14 1.40
2392 3240 2.339418 CGCACCCACGTGAATAGTAAA 58.661 47.619 19.30 0.00 43.14 2.01
2393 3241 1.999048 CGCACCCACGTGAATAGTAA 58.001 50.000 19.30 0.00 43.14 2.24
2394 3242 0.458889 GCGCACCCACGTGAATAGTA 60.459 55.000 19.30 0.00 43.14 1.82
2395 3243 1.740296 GCGCACCCACGTGAATAGT 60.740 57.895 19.30 5.88 43.14 2.12
2396 3244 2.798501 CGCGCACCCACGTGAATAG 61.799 63.158 19.30 5.19 46.13 1.73
2397 3245 2.811747 CGCGCACCCACGTGAATA 60.812 61.111 19.30 0.00 46.13 1.75
2410 3258 2.032549 AGATAAACATGAATGCTCGCGC 60.033 45.455 0.00 0.00 0.00 6.86
2411 3259 3.867055 AGATAAACATGAATGCTCGCG 57.133 42.857 0.00 0.00 0.00 5.87
2412 3260 5.335127 ACAAAGATAAACATGAATGCTCGC 58.665 37.500 0.00 0.00 0.00 5.03
2413 3261 9.507280 AAATACAAAGATAAACATGAATGCTCG 57.493 29.630 0.00 0.00 0.00 5.03
2485 3333 4.439776 GCGTTTATTGTGACTTTGTTGTCC 59.560 41.667 0.00 0.00 36.21 4.02
2486 3334 4.144051 CGCGTTTATTGTGACTTTGTTGTC 59.856 41.667 0.00 0.00 37.47 3.18
2487 3335 4.032355 CGCGTTTATTGTGACTTTGTTGT 58.968 39.130 0.00 0.00 0.00 3.32
2488 3336 3.420576 CCGCGTTTATTGTGACTTTGTTG 59.579 43.478 4.92 0.00 0.00 3.33
2489 3337 3.312973 TCCGCGTTTATTGTGACTTTGTT 59.687 39.130 4.92 0.00 0.00 2.83
2490 3338 2.873472 TCCGCGTTTATTGTGACTTTGT 59.127 40.909 4.92 0.00 0.00 2.83
2491 3339 3.529634 TCCGCGTTTATTGTGACTTTG 57.470 42.857 4.92 0.00 0.00 2.77
2492 3340 4.759516 ATTCCGCGTTTATTGTGACTTT 57.240 36.364 4.92 0.00 0.00 2.66
2493 3341 4.093850 GGTATTCCGCGTTTATTGTGACTT 59.906 41.667 4.92 0.00 0.00 3.01
2494 3342 3.619929 GGTATTCCGCGTTTATTGTGACT 59.380 43.478 4.92 0.00 0.00 3.41
2495 3343 3.242511 GGGTATTCCGCGTTTATTGTGAC 60.243 47.826 4.92 0.00 33.83 3.67
2496 3344 2.937799 GGGTATTCCGCGTTTATTGTGA 59.062 45.455 4.92 0.00 33.83 3.58
2497 3345 2.678836 TGGGTATTCCGCGTTTATTGTG 59.321 45.455 4.92 0.00 38.76 3.33
2498 3346 2.988570 TGGGTATTCCGCGTTTATTGT 58.011 42.857 4.92 0.00 38.76 2.71
2499 3347 3.314080 ACATGGGTATTCCGCGTTTATTG 59.686 43.478 4.92 0.00 38.76 1.90
2500 3348 3.547746 ACATGGGTATTCCGCGTTTATT 58.452 40.909 4.92 0.00 38.76 1.40
2501 3349 3.202829 ACATGGGTATTCCGCGTTTAT 57.797 42.857 4.92 0.00 38.76 1.40
2502 3350 2.695127 ACATGGGTATTCCGCGTTTA 57.305 45.000 4.92 0.00 38.76 2.01
2503 3351 1.828979 AACATGGGTATTCCGCGTTT 58.171 45.000 4.92 0.00 38.76 3.60
2504 3352 1.741145 GAAACATGGGTATTCCGCGTT 59.259 47.619 4.92 0.00 38.76 4.84
2505 3353 1.375551 GAAACATGGGTATTCCGCGT 58.624 50.000 4.92 0.00 38.76 6.01
2506 3354 0.661020 GGAAACATGGGTATTCCGCG 59.339 55.000 0.00 0.00 38.76 6.46
2507 3355 1.757682 TGGAAACATGGGTATTCCGC 58.242 50.000 13.62 0.00 44.48 5.54
2520 3368 7.433680 ACTGAGACAAATAACCAAATGGAAAC 58.566 34.615 6.42 0.00 38.94 2.78
2521 3369 7.595819 ACTGAGACAAATAACCAAATGGAAA 57.404 32.000 6.42 0.00 38.94 3.13
2522 3370 7.505585 AGAACTGAGACAAATAACCAAATGGAA 59.494 33.333 6.42 0.00 38.94 3.53
2523 3371 7.004086 AGAACTGAGACAAATAACCAAATGGA 58.996 34.615 6.42 0.00 38.94 3.41
2524 3372 7.219484 AGAACTGAGACAAATAACCAAATGG 57.781 36.000 0.00 0.00 42.17 3.16
2525 3373 8.352201 TCAAGAACTGAGACAAATAACCAAATG 58.648 33.333 0.00 0.00 0.00 2.32
2526 3374 8.463930 TCAAGAACTGAGACAAATAACCAAAT 57.536 30.769 0.00 0.00 0.00 2.32
2527 3375 7.873719 TCAAGAACTGAGACAAATAACCAAA 57.126 32.000 0.00 0.00 0.00 3.28
2528 3376 8.999431 GTATCAAGAACTGAGACAAATAACCAA 58.001 33.333 0.00 0.00 44.27 3.67
2529 3377 7.606456 GGTATCAAGAACTGAGACAAATAACCA 59.394 37.037 2.35 0.00 46.26 3.67
2530 3378 7.201530 CGGTATCAAGAACTGAGACAAATAACC 60.202 40.741 2.35 0.00 46.26 2.85
2531 3379 7.201530 CCGGTATCAAGAACTGAGACAAATAAC 60.202 40.741 0.00 0.00 46.26 1.89
2532 3380 6.816640 CCGGTATCAAGAACTGAGACAAATAA 59.183 38.462 0.00 0.00 46.26 1.40
2533 3381 6.338146 CCGGTATCAAGAACTGAGACAAATA 58.662 40.000 0.00 0.00 46.26 1.40
2534 3382 5.178797 CCGGTATCAAGAACTGAGACAAAT 58.821 41.667 0.00 0.00 46.26 2.32
2535 3383 4.566004 CCGGTATCAAGAACTGAGACAAA 58.434 43.478 0.00 0.00 46.26 2.83
2536 3384 3.616560 GCCGGTATCAAGAACTGAGACAA 60.617 47.826 1.90 0.00 46.26 3.18
2537 3385 2.094182 GCCGGTATCAAGAACTGAGACA 60.094 50.000 1.90 0.00 46.26 3.41
2538 3386 2.094182 TGCCGGTATCAAGAACTGAGAC 60.094 50.000 1.90 0.00 44.16 3.36
2539 3387 2.166459 CTGCCGGTATCAAGAACTGAGA 59.834 50.000 1.90 0.00 37.52 3.27
2540 3388 2.093973 ACTGCCGGTATCAAGAACTGAG 60.094 50.000 1.90 0.00 37.52 3.35
2541 3389 1.899814 ACTGCCGGTATCAAGAACTGA 59.100 47.619 1.90 0.00 38.81 3.41
2542 3390 2.386661 ACTGCCGGTATCAAGAACTG 57.613 50.000 1.90 0.00 0.00 3.16
2543 3391 2.615493 CCAACTGCCGGTATCAAGAACT 60.615 50.000 1.90 0.00 0.00 3.01
2544 3392 1.737793 CCAACTGCCGGTATCAAGAAC 59.262 52.381 1.90 0.00 0.00 3.01
2545 3393 1.349688 ACCAACTGCCGGTATCAAGAA 59.650 47.619 1.90 0.00 34.02 2.52
2546 3394 0.981183 ACCAACTGCCGGTATCAAGA 59.019 50.000 1.90 0.00 34.02 3.02
2547 3395 1.086696 CACCAACTGCCGGTATCAAG 58.913 55.000 1.90 0.00 34.02 3.02
2548 3396 0.687920 TCACCAACTGCCGGTATCAA 59.312 50.000 1.90 0.00 34.02 2.57
2549 3397 0.687920 TTCACCAACTGCCGGTATCA 59.312 50.000 1.90 0.00 34.02 2.15
2550 3398 1.816074 TTTCACCAACTGCCGGTATC 58.184 50.000 1.90 0.00 34.02 2.24
2551 3399 2.279935 TTTTCACCAACTGCCGGTAT 57.720 45.000 1.90 0.00 34.02 2.73
2552 3400 2.054232 TTTTTCACCAACTGCCGGTA 57.946 45.000 1.90 0.00 34.02 4.02
2553 3401 2.889200 TTTTTCACCAACTGCCGGT 58.111 47.368 1.90 0.00 37.16 5.28
2570 3418 0.531200 TTTCACCAACGCCGGTTTTT 59.469 45.000 1.90 0.00 37.07 1.94
2571 3419 0.531200 TTTTCACCAACGCCGGTTTT 59.469 45.000 1.90 0.00 37.07 2.43
2572 3420 0.531200 TTTTTCACCAACGCCGGTTT 59.469 45.000 1.90 0.00 37.07 3.27
2573 3421 2.190756 TTTTTCACCAACGCCGGTT 58.809 47.368 1.90 0.00 37.07 4.44
2574 3422 3.921521 TTTTTCACCAACGCCGGT 58.078 50.000 1.90 0.00 41.07 5.28
2595 3443 9.768662 AAGAGCAACAAACTAAATCAAATGATT 57.231 25.926 2.83 2.83 45.91 2.57
2596 3444 9.415544 GAAGAGCAACAAACTAAATCAAATGAT 57.584 29.630 0.00 0.00 36.07 2.45
2597 3445 8.412456 TGAAGAGCAACAAACTAAATCAAATGA 58.588 29.630 0.00 0.00 0.00 2.57
2598 3446 8.578308 TGAAGAGCAACAAACTAAATCAAATG 57.422 30.769 0.00 0.00 0.00 2.32
2599 3447 9.768662 AATGAAGAGCAACAAACTAAATCAAAT 57.231 25.926 0.00 0.00 0.00 2.32
2601 3449 9.897744 CTAATGAAGAGCAACAAACTAAATCAA 57.102 29.630 0.00 0.00 0.00 2.57
2602 3450 8.023128 GCTAATGAAGAGCAACAAACTAAATCA 58.977 33.333 0.00 0.00 39.84 2.57
2603 3451 8.023128 TGCTAATGAAGAGCAACAAACTAAATC 58.977 33.333 0.00 0.00 46.71 2.17
2604 3452 7.885297 TGCTAATGAAGAGCAACAAACTAAAT 58.115 30.769 0.00 0.00 46.71 1.40
2605 3453 7.270757 TGCTAATGAAGAGCAACAAACTAAA 57.729 32.000 0.00 0.00 46.71 1.85
2606 3454 6.875948 TGCTAATGAAGAGCAACAAACTAA 57.124 33.333 0.00 0.00 46.71 2.24
2616 3464 2.717639 TTCCCCTGCTAATGAAGAGC 57.282 50.000 0.00 0.00 40.53 4.09
2617 3465 3.950395 CCTTTTCCCCTGCTAATGAAGAG 59.050 47.826 0.00 0.00 0.00 2.85
2618 3466 3.591527 TCCTTTTCCCCTGCTAATGAAGA 59.408 43.478 0.00 0.00 0.00 2.87
2619 3467 3.968265 TCCTTTTCCCCTGCTAATGAAG 58.032 45.455 0.00 0.00 0.00 3.02
2620 3468 4.396357 TTCCTTTTCCCCTGCTAATGAA 57.604 40.909 0.00 0.00 0.00 2.57
2621 3469 4.608170 ATTCCTTTTCCCCTGCTAATGA 57.392 40.909 0.00 0.00 0.00 2.57
2622 3470 6.310149 AGATATTCCTTTTCCCCTGCTAATG 58.690 40.000 0.00 0.00 0.00 1.90
2623 3471 6.536684 AGATATTCCTTTTCCCCTGCTAAT 57.463 37.500 0.00 0.00 0.00 1.73
2624 3472 5.994416 AGATATTCCTTTTCCCCTGCTAA 57.006 39.130 0.00 0.00 0.00 3.09
2625 3473 7.025620 AGATAGATATTCCTTTTCCCCTGCTA 58.974 38.462 0.00 0.00 0.00 3.49
2626 3474 5.854481 AGATAGATATTCCTTTTCCCCTGCT 59.146 40.000 0.00 0.00 0.00 4.24
2627 3475 5.942826 CAGATAGATATTCCTTTTCCCCTGC 59.057 44.000 0.00 0.00 0.00 4.85
2628 3476 5.942826 GCAGATAGATATTCCTTTTCCCCTG 59.057 44.000 0.00 0.00 0.00 4.45
2629 3477 5.014649 GGCAGATAGATATTCCTTTTCCCCT 59.985 44.000 0.00 0.00 0.00 4.79
2630 3478 5.014649 AGGCAGATAGATATTCCTTTTCCCC 59.985 44.000 0.00 0.00 0.00 4.81
2631 3479 6.133253 AGGCAGATAGATATTCCTTTTCCC 57.867 41.667 0.00 0.00 0.00 3.97
2632 3480 6.821160 GCTAGGCAGATAGATATTCCTTTTCC 59.179 42.308 0.00 0.00 0.00 3.13
2633 3481 7.619965 AGCTAGGCAGATAGATATTCCTTTTC 58.380 38.462 0.00 0.00 0.00 2.29
2634 3482 7.566658 AGCTAGGCAGATAGATATTCCTTTT 57.433 36.000 0.00 0.00 0.00 2.27
2635 3483 7.566658 AAGCTAGGCAGATAGATATTCCTTT 57.433 36.000 0.00 0.00 0.00 3.11
2636 3484 7.393216 CAAAGCTAGGCAGATAGATATTCCTT 58.607 38.462 0.00 0.00 0.00 3.36
2637 3485 6.070309 CCAAAGCTAGGCAGATAGATATTCCT 60.070 42.308 0.00 0.00 0.00 3.36
2638 3486 6.112058 CCAAAGCTAGGCAGATAGATATTCC 58.888 44.000 0.00 0.00 0.00 3.01
2639 3487 6.706295 ACCAAAGCTAGGCAGATAGATATTC 58.294 40.000 5.09 0.00 0.00 1.75
2640 3488 6.694445 ACCAAAGCTAGGCAGATAGATATT 57.306 37.500 5.09 0.00 0.00 1.28
2641 3489 7.185565 TCTACCAAAGCTAGGCAGATAGATAT 58.814 38.462 5.09 0.00 0.00 1.63
2642 3490 6.552932 TCTACCAAAGCTAGGCAGATAGATA 58.447 40.000 5.09 0.00 0.00 1.98
2643 3491 5.398236 TCTACCAAAGCTAGGCAGATAGAT 58.602 41.667 5.09 0.00 0.00 1.98
2644 3492 4.804597 TCTACCAAAGCTAGGCAGATAGA 58.195 43.478 5.09 2.92 0.00 1.98
2645 3493 5.736951 ATCTACCAAAGCTAGGCAGATAG 57.263 43.478 15.77 6.61 37.46 2.08
2646 3494 6.464465 GGAAATCTACCAAAGCTAGGCAGATA 60.464 42.308 17.04 0.00 38.11 1.98
2647 3495 5.372373 GAAATCTACCAAAGCTAGGCAGAT 58.628 41.667 12.83 12.83 40.24 2.90
2648 3496 4.384208 GGAAATCTACCAAAGCTAGGCAGA 60.384 45.833 9.76 9.76 33.24 4.26
2649 3497 3.879892 GGAAATCTACCAAAGCTAGGCAG 59.120 47.826 5.09 2.38 0.00 4.85
2650 3498 3.523564 AGGAAATCTACCAAAGCTAGGCA 59.476 43.478 5.09 0.00 0.00 4.75
2651 3499 4.130857 GAGGAAATCTACCAAAGCTAGGC 58.869 47.826 5.09 0.00 0.00 3.93
2652 3500 5.359194 TGAGGAAATCTACCAAAGCTAGG 57.641 43.478 3.67 3.67 0.00 3.02
2653 3501 6.670077 GTTGAGGAAATCTACCAAAGCTAG 57.330 41.667 0.00 0.00 0.00 3.42
2662 3510 6.834168 TTCATTTGGGTTGAGGAAATCTAC 57.166 37.500 0.00 0.00 33.45 2.59
2663 3511 7.847711 TTTTCATTTGGGTTGAGGAAATCTA 57.152 32.000 0.00 0.00 0.00 1.98
2664 3512 6.745794 TTTTCATTTGGGTTGAGGAAATCT 57.254 33.333 0.00 0.00 0.00 2.40
2665 3513 6.765512 TGTTTTTCATTTGGGTTGAGGAAATC 59.234 34.615 0.00 0.00 0.00 2.17
2666 3514 6.657875 TGTTTTTCATTTGGGTTGAGGAAAT 58.342 32.000 0.00 0.00 0.00 2.17
2667 3515 6.054860 TGTTTTTCATTTGGGTTGAGGAAA 57.945 33.333 0.00 0.00 0.00 3.13
2668 3516 5.683876 TGTTTTTCATTTGGGTTGAGGAA 57.316 34.783 0.00 0.00 0.00 3.36
2669 3517 5.683876 TTGTTTTTCATTTGGGTTGAGGA 57.316 34.783 0.00 0.00 0.00 3.71
2670 3518 6.749923 TTTTGTTTTTCATTTGGGTTGAGG 57.250 33.333 0.00 0.00 0.00 3.86
2671 3519 9.288124 GAATTTTTGTTTTTCATTTGGGTTGAG 57.712 29.630 0.00 0.00 0.00 3.02
2672 3520 9.018582 AGAATTTTTGTTTTTCATTTGGGTTGA 57.981 25.926 0.00 0.00 0.00 3.18
2673 3521 9.074443 CAGAATTTTTGTTTTTCATTTGGGTTG 57.926 29.630 0.00 0.00 0.00 3.77
2674 3522 9.018582 TCAGAATTTTTGTTTTTCATTTGGGTT 57.981 25.926 0.00 0.00 0.00 4.11
2675 3523 8.572855 TCAGAATTTTTGTTTTTCATTTGGGT 57.427 26.923 0.00 0.00 0.00 4.51
2676 3524 8.891720 TCTCAGAATTTTTGTTTTTCATTTGGG 58.108 29.630 0.00 0.00 0.00 4.12
2688 3536 9.918630 CACCTCATAAATTCTCAGAATTTTTGT 57.081 29.630 28.27 17.69 33.39 2.83
2689 3537 9.362539 CCACCTCATAAATTCTCAGAATTTTTG 57.637 33.333 26.66 26.20 33.11 2.44
2690 3538 9.312904 TCCACCTCATAAATTCTCAGAATTTTT 57.687 29.630 26.66 17.91 32.64 1.94
2691 3539 8.884124 TCCACCTCATAAATTCTCAGAATTTT 57.116 30.769 26.66 13.93 32.64 1.82
2694 3542 9.790344 CTTATCCACCTCATAAATTCTCAGAAT 57.210 33.333 0.00 0.00 0.00 2.40
2695 3543 8.772250 ACTTATCCACCTCATAAATTCTCAGAA 58.228 33.333 0.00 0.00 0.00 3.02
2696 3544 8.324191 ACTTATCCACCTCATAAATTCTCAGA 57.676 34.615 0.00 0.00 0.00 3.27
2697 3545 7.659390 GGACTTATCCACCTCATAAATTCTCAG 59.341 40.741 0.00 0.00 45.47 3.35
2698 3546 7.509546 GGACTTATCCACCTCATAAATTCTCA 58.490 38.462 0.00 0.00 45.47 3.27
2699 3547 6.647067 CGGACTTATCCACCTCATAAATTCTC 59.353 42.308 0.00 0.00 46.67 2.87
2700 3548 6.326583 TCGGACTTATCCACCTCATAAATTCT 59.673 38.462 0.00 0.00 46.67 2.40
2701 3549 6.424207 GTCGGACTTATCCACCTCATAAATTC 59.576 42.308 0.00 0.00 46.67 2.17
2702 3550 6.289064 GTCGGACTTATCCACCTCATAAATT 58.711 40.000 0.00 0.00 46.67 1.82
2703 3551 5.509163 CGTCGGACTTATCCACCTCATAAAT 60.509 44.000 6.57 0.00 46.67 1.40
2704 3552 4.202080 CGTCGGACTTATCCACCTCATAAA 60.202 45.833 6.57 0.00 46.67 1.40
2705 3553 3.317149 CGTCGGACTTATCCACCTCATAA 59.683 47.826 6.57 0.00 46.67 1.90
2706 3554 2.882761 CGTCGGACTTATCCACCTCATA 59.117 50.000 6.57 0.00 46.67 2.15
2707 3555 1.681793 CGTCGGACTTATCCACCTCAT 59.318 52.381 6.57 0.00 46.67 2.90
2708 3556 1.100510 CGTCGGACTTATCCACCTCA 58.899 55.000 6.57 0.00 46.67 3.86
2709 3557 1.065251 GTCGTCGGACTTATCCACCTC 59.935 57.143 6.57 0.00 46.67 3.85
2710 3558 1.101331 GTCGTCGGACTTATCCACCT 58.899 55.000 6.57 0.00 46.67 4.00
2711 3559 3.637297 GTCGTCGGACTTATCCACC 57.363 57.895 6.57 0.00 46.67 4.61
2720 3568 0.097325 CTACTGCTGAGTCGTCGGAC 59.903 60.000 0.00 0.00 43.76 4.79
2721 3569 0.321387 ACTACTGCTGAGTCGTCGGA 60.321 55.000 0.00 0.00 33.21 4.55
2722 3570 2.172534 ACTACTGCTGAGTCGTCGG 58.827 57.895 0.00 0.00 33.21 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.