Multiple sequence alignment - TraesCS7D01G158800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G158800 chr7D 100.000 2288 0 0 1 2288 107722764 107720477 0.000000e+00 4226
1 TraesCS7D01G158800 chr7D 93.372 1720 109 2 1 1720 463975823 463974109 0.000000e+00 2540
2 TraesCS7D01G158800 chr7D 98.125 320 6 0 1967 2286 167844630 167844311 1.990000e-155 558
3 TraesCS7D01G158800 chr4B 93.314 1720 110 2 1 1720 551784719 551786433 0.000000e+00 2534
4 TraesCS7D01G158800 chr4B 93.140 1720 113 2 1 1720 551730111 551731825 0.000000e+00 2518
5 TraesCS7D01G158800 chr7B 93.198 1720 104 7 1 1720 150842118 150843824 0.000000e+00 2516
6 TraesCS7D01G158800 chr6D 92.849 1720 113 5 1 1720 450905966 450907675 0.000000e+00 2486
7 TraesCS7D01G158800 chr6D 98.131 321 6 0 1967 2287 48852599 48852279 5.520000e-156 560
8 TraesCS7D01G158800 chr2B 91.681 1719 133 5 1 1718 459481017 459479308 0.000000e+00 2374
9 TraesCS7D01G158800 chr5B 91.161 1731 137 5 1 1728 641300596 641298879 0.000000e+00 2335
10 TraesCS7D01G158800 chr3A 90.904 1726 137 10 1 1720 418765653 418763942 0.000000e+00 2300
11 TraesCS7D01G158800 chr4A 90.746 1729 144 8 1 1729 19185935 19184223 0.000000e+00 2292
12 TraesCS7D01G158800 chr5D 98.750 320 4 0 1967 2286 216536829 216536510 9.170000e-159 569
13 TraesCS7D01G158800 chr5D 96.746 338 10 1 1950 2286 536302502 536302165 1.530000e-156 562
14 TraesCS7D01G158800 chr2D 98.438 320 5 0 1967 2286 365114297 365113978 4.270000e-157 564
15 TraesCS7D01G158800 chr2D 98.125 320 6 0 1967 2286 193533539 193533220 1.990000e-155 558
16 TraesCS7D01G158800 chr2D 98.125 320 6 0 1967 2286 374191769 374191450 1.990000e-155 558
17 TraesCS7D01G158800 chr2D 98.125 320 6 0 1967 2286 485761410 485761729 1.990000e-155 558
18 TraesCS7D01G158800 chr3D 98.125 320 6 0 1967 2286 66927871 66927552 1.990000e-155 558


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G158800 chr7D 107720477 107722764 2287 True 4226 4226 100.000 1 2288 1 chr7D.!!$R1 2287
1 TraesCS7D01G158800 chr7D 463974109 463975823 1714 True 2540 2540 93.372 1 1720 1 chr7D.!!$R3 1719
2 TraesCS7D01G158800 chr4B 551784719 551786433 1714 False 2534 2534 93.314 1 1720 1 chr4B.!!$F2 1719
3 TraesCS7D01G158800 chr4B 551730111 551731825 1714 False 2518 2518 93.140 1 1720 1 chr4B.!!$F1 1719
4 TraesCS7D01G158800 chr7B 150842118 150843824 1706 False 2516 2516 93.198 1 1720 1 chr7B.!!$F1 1719
5 TraesCS7D01G158800 chr6D 450905966 450907675 1709 False 2486 2486 92.849 1 1720 1 chr6D.!!$F1 1719
6 TraesCS7D01G158800 chr2B 459479308 459481017 1709 True 2374 2374 91.681 1 1718 1 chr2B.!!$R1 1717
7 TraesCS7D01G158800 chr5B 641298879 641300596 1717 True 2335 2335 91.161 1 1728 1 chr5B.!!$R1 1727
8 TraesCS7D01G158800 chr3A 418763942 418765653 1711 True 2300 2300 90.904 1 1720 1 chr3A.!!$R1 1719
9 TraesCS7D01G158800 chr4A 19184223 19185935 1712 True 2292 2292 90.746 1 1729 1 chr4A.!!$R1 1728

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
390 394 0.393944 CCCTCATGTGCACTGCATCT 60.394 55.0 19.41 0.0 41.91 2.9 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2001 2022 0.03467 GCTGCATCACCCTTTCCTCT 60.035 55.0 0.0 0.0 0.0 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 2.814336 GGCCTTCGTCTTCTTGTTCATT 59.186 45.455 0.00 0.00 0.00 2.57
46 47 4.657408 TCATTGCTGTGCGGGGCA 62.657 61.111 0.00 0.00 35.60 5.36
103 104 1.379443 ATCTGCCAGGTACGACGGA 60.379 57.895 0.00 0.00 0.00 4.69
252 256 5.280011 CCAGTAGTTCTTGTACTTGGACCAT 60.280 44.000 0.00 0.00 0.00 3.55
264 268 2.496899 TGGACCATTTCTTCCTCTGC 57.503 50.000 0.00 0.00 32.55 4.26
320 324 0.647410 CGAATGATGTCGACTGCCAC 59.353 55.000 17.92 4.34 43.86 5.01
367 371 1.220529 CGTCTTCAGCTCTTGTGCAA 58.779 50.000 0.00 0.00 34.99 4.08
379 383 0.542467 TTGTGCAATGGCCCTCATGT 60.542 50.000 0.00 0.00 40.13 3.21
390 394 0.393944 CCCTCATGTGCACTGCATCT 60.394 55.000 19.41 0.00 41.91 2.90
558 562 2.547642 GCTAGAGCTCATGGTGATGGAC 60.548 54.545 17.77 0.00 38.21 4.02
648 654 2.206536 GGCGATGGAGAGGAGGAGG 61.207 68.421 0.00 0.00 0.00 4.30
703 709 6.830324 TGCTCTTCAATAAGCCATGAACTATT 59.170 34.615 0.00 0.00 37.73 1.73
708 714 8.518430 TTCAATAAGCCATGAACTATTTGCTA 57.482 30.769 0.00 0.00 30.94 3.49
797 803 2.286772 CGTTGACAACAAGGGTAAGCAC 60.287 50.000 18.09 0.00 37.97 4.40
832 838 2.661537 CGACGAGGTTGTGCTGCA 60.662 61.111 0.00 0.00 0.00 4.41
833 839 2.243957 CGACGAGGTTGTGCTGCAA 61.244 57.895 2.77 0.00 34.16 4.08
893 899 2.583593 GACGAGCGCATGGAGGAC 60.584 66.667 11.47 0.00 0.00 3.85
954 960 0.920763 ATGAGGAGGATGGCCCAACA 60.921 55.000 0.00 0.00 37.41 3.33
956 962 2.438434 GGAGGATGGCCCAACACG 60.438 66.667 0.00 0.00 37.41 4.49
1068 1075 0.839946 AGCTCAGGAACAACACTGGT 59.160 50.000 0.00 0.00 35.47 4.00
1144 1151 4.338710 GGGCCACCTACGCAACCA 62.339 66.667 4.39 0.00 0.00 3.67
1195 1202 0.035915 GTTCAAGCTCCTCACTCCCC 60.036 60.000 0.00 0.00 0.00 4.81
1221 1228 3.070734 CCCTCAAGGTCATCATCTTCGAT 59.929 47.826 0.00 0.00 0.00 3.59
1237 1244 3.756933 TCGATGATGATGGCATTGAGA 57.243 42.857 0.00 0.00 34.11 3.27
1364 1384 6.021596 GGTTTATGCGTTGAACTGTTATGAG 58.978 40.000 0.00 0.00 0.00 2.90
1382 1403 2.165641 TGAGGTGTGGTACTGCTTATCG 59.834 50.000 0.00 0.00 0.00 2.92
1383 1404 2.426024 GAGGTGTGGTACTGCTTATCGA 59.574 50.000 0.00 0.00 0.00 3.59
1472 1493 4.085357 TCTGCTGAAGTGTGTTGGTAAT 57.915 40.909 0.00 0.00 0.00 1.89
1505 1526 2.748465 GCCAAAGAGGTTACCACACACT 60.748 50.000 3.51 0.00 40.61 3.55
1577 1598 1.747774 GCAACCAAACACCAGGCAT 59.252 52.632 0.00 0.00 0.00 4.40
1613 1634 3.834799 GGCAAGAGGGCATGCAGC 61.835 66.667 21.36 12.31 44.32 5.25
1696 1717 2.353357 AGGCTATGCAATGCAGCTAA 57.647 45.000 14.98 0.00 43.65 3.09
1722 1743 2.421775 CACTACTGCAACCAAACACACA 59.578 45.455 0.00 0.00 0.00 3.72
1729 1750 4.428209 TGCAACCAAACACACACTTAATG 58.572 39.130 0.00 0.00 0.00 1.90
1730 1751 3.245048 GCAACCAAACACACACTTAATGC 59.755 43.478 0.00 0.00 0.00 3.56
1731 1752 4.681744 CAACCAAACACACACTTAATGCT 58.318 39.130 0.00 0.00 0.00 3.79
1732 1753 4.568152 ACCAAACACACACTTAATGCTC 57.432 40.909 0.00 0.00 0.00 4.26
1733 1754 4.207165 ACCAAACACACACTTAATGCTCT 58.793 39.130 0.00 0.00 0.00 4.09
1734 1755 4.275936 ACCAAACACACACTTAATGCTCTC 59.724 41.667 0.00 0.00 0.00 3.20
1735 1756 4.275689 CCAAACACACACTTAATGCTCTCA 59.724 41.667 0.00 0.00 0.00 3.27
1736 1757 5.048504 CCAAACACACACTTAATGCTCTCAT 60.049 40.000 0.00 0.00 33.53 2.90
1737 1758 5.618056 AACACACACTTAATGCTCTCATG 57.382 39.130 0.00 0.00 32.23 3.07
1738 1759 3.438087 ACACACACTTAATGCTCTCATGC 59.562 43.478 0.00 0.00 32.23 4.06
1739 1760 2.674852 ACACACTTAATGCTCTCATGCG 59.325 45.455 0.00 0.00 35.36 4.73
1740 1761 2.931969 CACACTTAATGCTCTCATGCGA 59.068 45.455 0.00 0.00 35.36 5.10
1741 1762 2.932614 ACACTTAATGCTCTCATGCGAC 59.067 45.455 0.00 0.00 35.36 5.19
1742 1763 2.286294 CACTTAATGCTCTCATGCGACC 59.714 50.000 0.00 0.00 35.36 4.79
1743 1764 2.093500 ACTTAATGCTCTCATGCGACCA 60.093 45.455 0.00 0.00 35.36 4.02
1744 1765 2.689553 TAATGCTCTCATGCGACCAA 57.310 45.000 0.00 0.00 35.36 3.67
1745 1766 2.048444 AATGCTCTCATGCGACCAAT 57.952 45.000 0.00 0.00 35.36 3.16
1746 1767 2.916702 ATGCTCTCATGCGACCAATA 57.083 45.000 0.00 0.00 35.36 1.90
1747 1768 1.939974 TGCTCTCATGCGACCAATAC 58.060 50.000 0.00 0.00 35.36 1.89
1748 1769 1.482182 TGCTCTCATGCGACCAATACT 59.518 47.619 0.00 0.00 35.36 2.12
1749 1770 2.131183 GCTCTCATGCGACCAATACTC 58.869 52.381 0.00 0.00 0.00 2.59
1750 1771 2.389059 CTCTCATGCGACCAATACTCG 58.611 52.381 0.00 0.00 0.00 4.18
1751 1772 1.067060 TCTCATGCGACCAATACTCGG 59.933 52.381 0.00 0.00 0.00 4.63
1752 1773 0.104120 TCATGCGACCAATACTCGGG 59.896 55.000 0.00 0.00 0.00 5.14
1753 1774 0.179084 CATGCGACCAATACTCGGGT 60.179 55.000 0.00 0.00 40.96 5.28
1754 1775 0.539986 ATGCGACCAATACTCGGGTT 59.460 50.000 0.00 0.00 37.57 4.11
1755 1776 0.108520 TGCGACCAATACTCGGGTTC 60.109 55.000 0.00 0.00 37.57 3.62
1756 1777 0.808847 GCGACCAATACTCGGGTTCC 60.809 60.000 0.00 0.00 37.57 3.62
1757 1778 0.533491 CGACCAATACTCGGGTTCCA 59.467 55.000 0.00 0.00 37.57 3.53
1758 1779 1.470979 CGACCAATACTCGGGTTCCAG 60.471 57.143 0.00 0.00 37.57 3.86
1759 1780 1.553704 GACCAATACTCGGGTTCCAGT 59.446 52.381 0.00 0.00 37.57 4.00
1760 1781 2.762327 GACCAATACTCGGGTTCCAGTA 59.238 50.000 0.00 0.00 37.57 2.74
1761 1782 2.498885 ACCAATACTCGGGTTCCAGTAC 59.501 50.000 0.00 0.00 32.12 2.73
1762 1783 2.764572 CCAATACTCGGGTTCCAGTACT 59.235 50.000 0.00 0.00 0.00 2.73
1763 1784 3.956199 CCAATACTCGGGTTCCAGTACTA 59.044 47.826 0.00 0.00 0.00 1.82
1764 1785 4.587684 CCAATACTCGGGTTCCAGTACTAT 59.412 45.833 0.00 0.00 0.00 2.12
1765 1786 5.278858 CCAATACTCGGGTTCCAGTACTATC 60.279 48.000 0.00 0.00 0.00 2.08
1766 1787 2.295885 ACTCGGGTTCCAGTACTATCG 58.704 52.381 0.00 0.00 0.00 2.92
1767 1788 2.295885 CTCGGGTTCCAGTACTATCGT 58.704 52.381 0.00 0.00 0.00 3.73
1768 1789 2.019249 TCGGGTTCCAGTACTATCGTG 58.981 52.381 0.00 0.00 0.00 4.35
1769 1790 2.019249 CGGGTTCCAGTACTATCGTGA 58.981 52.381 0.00 0.00 0.00 4.35
1770 1791 2.033049 CGGGTTCCAGTACTATCGTGAG 59.967 54.545 0.00 0.00 0.00 3.51
1771 1792 3.022406 GGGTTCCAGTACTATCGTGAGT 58.978 50.000 0.00 0.00 0.00 3.41
1772 1793 4.202441 GGGTTCCAGTACTATCGTGAGTA 58.798 47.826 0.00 0.00 0.00 2.59
1773 1794 4.275443 GGGTTCCAGTACTATCGTGAGTAG 59.725 50.000 0.00 0.00 32.56 2.57
1774 1795 4.275443 GGTTCCAGTACTATCGTGAGTAGG 59.725 50.000 0.00 0.00 32.56 3.18
1775 1796 4.082665 TCCAGTACTATCGTGAGTAGGG 57.917 50.000 0.00 5.54 32.56 3.53
1776 1797 2.553172 CCAGTACTATCGTGAGTAGGGC 59.447 54.545 0.00 0.00 32.56 5.19
1777 1798 2.553172 CAGTACTATCGTGAGTAGGGCC 59.447 54.545 0.00 0.00 32.56 5.80
1778 1799 1.885233 GTACTATCGTGAGTAGGGCCC 59.115 57.143 16.46 16.46 32.56 5.80
1779 1800 0.260816 ACTATCGTGAGTAGGGCCCA 59.739 55.000 27.56 7.27 0.00 5.36
1780 1801 0.674534 CTATCGTGAGTAGGGCCCAC 59.325 60.000 27.56 19.90 0.00 4.61
1781 1802 0.757935 TATCGTGAGTAGGGCCCACC 60.758 60.000 27.56 14.21 40.67 4.61
1782 1803 2.815684 ATCGTGAGTAGGGCCCACCA 62.816 60.000 27.56 16.04 43.89 4.17
1783 1804 2.990479 GTGAGTAGGGCCCACCAG 59.010 66.667 27.56 0.00 43.89 4.00
1784 1805 1.918800 GTGAGTAGGGCCCACCAGT 60.919 63.158 27.56 11.65 43.89 4.00
1785 1806 0.616679 GTGAGTAGGGCCCACCAGTA 60.617 60.000 27.56 3.54 43.89 2.74
1786 1807 0.117541 TGAGTAGGGCCCACCAGTAA 59.882 55.000 27.56 1.14 43.89 2.24
1787 1808 0.831307 GAGTAGGGCCCACCAGTAAG 59.169 60.000 27.56 0.00 43.89 2.34
1788 1809 0.118547 AGTAGGGCCCACCAGTAAGT 59.881 55.000 27.56 1.16 43.89 2.24
1789 1810 0.989602 GTAGGGCCCACCAGTAAGTT 59.010 55.000 27.56 0.25 43.89 2.66
1790 1811 2.190538 GTAGGGCCCACCAGTAAGTTA 58.809 52.381 27.56 0.00 43.89 2.24
1791 1812 1.286248 AGGGCCCACCAGTAAGTTAG 58.714 55.000 27.56 0.00 43.89 2.34
1792 1813 0.393944 GGGCCCACCAGTAAGTTAGC 60.394 60.000 19.95 0.00 39.85 3.09
1793 1814 0.326927 GGCCCACCAGTAAGTTAGCA 59.673 55.000 0.00 0.00 35.26 3.49
1794 1815 1.450025 GCCCACCAGTAAGTTAGCAC 58.550 55.000 0.00 0.00 0.00 4.40
1795 1816 1.003233 GCCCACCAGTAAGTTAGCACT 59.997 52.381 0.00 0.00 33.11 4.40
1796 1817 2.699954 CCCACCAGTAAGTTAGCACTG 58.300 52.381 0.00 0.00 41.51 3.66
1797 1818 2.076863 CCACCAGTAAGTTAGCACTGC 58.923 52.381 0.00 0.00 40.69 4.40
1798 1819 2.549992 CCACCAGTAAGTTAGCACTGCA 60.550 50.000 3.30 0.00 40.69 4.41
1799 1820 3.138304 CACCAGTAAGTTAGCACTGCAA 58.862 45.455 3.30 0.00 40.69 4.08
1800 1821 3.058914 CACCAGTAAGTTAGCACTGCAAC 60.059 47.826 3.30 6.08 40.69 4.17
1801 1822 3.138304 CCAGTAAGTTAGCACTGCAACA 58.862 45.455 3.30 0.00 40.69 3.33
1802 1823 3.753272 CCAGTAAGTTAGCACTGCAACAT 59.247 43.478 3.30 2.24 40.69 2.71
1803 1824 4.935205 CCAGTAAGTTAGCACTGCAACATA 59.065 41.667 3.30 1.36 40.69 2.29
1804 1825 5.586243 CCAGTAAGTTAGCACTGCAACATAT 59.414 40.000 3.30 0.80 40.69 1.78
1805 1826 6.094048 CCAGTAAGTTAGCACTGCAACATATT 59.906 38.462 3.30 0.00 40.69 1.28
1806 1827 6.963242 CAGTAAGTTAGCACTGCAACATATTG 59.037 38.462 3.30 6.71 36.09 1.90
1807 1828 5.964958 AAGTTAGCACTGCAACATATTGT 57.035 34.783 3.30 0.00 32.98 2.71
1808 1829 5.300969 AGTTAGCACTGCAACATATTGTG 57.699 39.130 3.30 0.00 38.17 3.33
1809 1830 4.761739 AGTTAGCACTGCAACATATTGTGT 59.238 37.500 3.30 0.00 44.84 3.72
1810 1831 3.837213 AGCACTGCAACATATTGTGTC 57.163 42.857 3.30 0.00 41.14 3.67
1811 1832 2.489329 AGCACTGCAACATATTGTGTCC 59.511 45.455 3.30 0.00 41.14 4.02
1812 1833 2.728846 GCACTGCAACATATTGTGTCCG 60.729 50.000 0.00 0.00 41.14 4.79
1813 1834 2.741517 CACTGCAACATATTGTGTCCGA 59.258 45.455 0.00 0.00 41.14 4.55
1814 1835 2.742053 ACTGCAACATATTGTGTCCGAC 59.258 45.455 0.00 0.00 41.14 4.79
1815 1836 2.080693 TGCAACATATTGTGTCCGACC 58.919 47.619 0.00 0.00 41.14 4.79
1816 1837 2.290008 TGCAACATATTGTGTCCGACCT 60.290 45.455 0.00 0.00 41.14 3.85
1817 1838 2.095853 GCAACATATTGTGTCCGACCTG 59.904 50.000 0.00 0.00 41.14 4.00
1818 1839 2.024176 ACATATTGTGTCCGACCTGC 57.976 50.000 0.00 0.00 35.77 4.85
1819 1840 1.299541 CATATTGTGTCCGACCTGCC 58.700 55.000 0.00 0.00 0.00 4.85
1820 1841 0.179084 ATATTGTGTCCGACCTGCCG 60.179 55.000 0.00 0.00 0.00 5.69
1821 1842 1.537814 TATTGTGTCCGACCTGCCGT 61.538 55.000 0.00 0.00 0.00 5.68
1822 1843 2.391724 ATTGTGTCCGACCTGCCGTT 62.392 55.000 0.00 0.00 0.00 4.44
1823 1844 1.746322 TTGTGTCCGACCTGCCGTTA 61.746 55.000 0.00 0.00 0.00 3.18
1824 1845 1.735559 GTGTCCGACCTGCCGTTAC 60.736 63.158 0.00 0.00 0.00 2.50
1825 1846 2.125793 GTCCGACCTGCCGTTACC 60.126 66.667 0.00 0.00 0.00 2.85
1826 1847 3.384532 TCCGACCTGCCGTTACCC 61.385 66.667 0.00 0.00 0.00 3.69
1827 1848 3.387947 CCGACCTGCCGTTACCCT 61.388 66.667 0.00 0.00 0.00 4.34
1828 1849 2.183555 CGACCTGCCGTTACCCTC 59.816 66.667 0.00 0.00 0.00 4.30
1829 1850 2.642254 CGACCTGCCGTTACCCTCA 61.642 63.158 0.00 0.00 0.00 3.86
1830 1851 1.905512 GACCTGCCGTTACCCTCAT 59.094 57.895 0.00 0.00 0.00 2.90
1831 1852 0.462047 GACCTGCCGTTACCCTCATG 60.462 60.000 0.00 0.00 0.00 3.07
1832 1853 1.819632 CCTGCCGTTACCCTCATGC 60.820 63.158 0.00 0.00 0.00 4.06
1833 1854 1.819632 CTGCCGTTACCCTCATGCC 60.820 63.158 0.00 0.00 0.00 4.40
1834 1855 2.257409 CTGCCGTTACCCTCATGCCT 62.257 60.000 0.00 0.00 0.00 4.75
1835 1856 1.077716 GCCGTTACCCTCATGCCTT 60.078 57.895 0.00 0.00 0.00 4.35
1836 1857 1.376609 GCCGTTACCCTCATGCCTTG 61.377 60.000 0.00 0.00 0.00 3.61
1837 1858 0.748005 CCGTTACCCTCATGCCTTGG 60.748 60.000 0.00 0.00 0.00 3.61
1838 1859 0.748005 CGTTACCCTCATGCCTTGGG 60.748 60.000 10.12 10.12 46.07 4.12
1848 1869 4.390048 GCCTTGGGCTAACGTCAA 57.610 55.556 0.80 0.00 46.69 3.18
1849 1870 2.868253 GCCTTGGGCTAACGTCAAT 58.132 52.632 0.80 0.00 46.69 2.57
1850 1871 0.451783 GCCTTGGGCTAACGTCAATG 59.548 55.000 0.80 0.00 46.69 2.82
1851 1872 1.094785 CCTTGGGCTAACGTCAATGG 58.905 55.000 0.00 0.00 0.00 3.16
1852 1873 0.451783 CTTGGGCTAACGTCAATGGC 59.548 55.000 0.00 0.00 0.00 4.40
1853 1874 1.302383 TTGGGCTAACGTCAATGGCG 61.302 55.000 5.42 5.42 0.00 5.69
1854 1875 1.448893 GGGCTAACGTCAATGGCGA 60.449 57.895 16.16 0.00 0.00 5.54
1855 1876 1.429148 GGGCTAACGTCAATGGCGAG 61.429 60.000 16.16 2.39 0.00 5.03
1856 1877 1.348594 GCTAACGTCAATGGCGAGC 59.651 57.895 16.16 9.98 0.00 5.03
1857 1878 1.358725 GCTAACGTCAATGGCGAGCA 61.359 55.000 16.16 0.00 32.05 4.26
1858 1879 0.370273 CTAACGTCAATGGCGAGCAC 59.630 55.000 16.16 0.00 0.00 4.40
1859 1880 1.017177 TAACGTCAATGGCGAGCACC 61.017 55.000 16.16 0.00 0.00 5.01
1860 1881 2.434884 CGTCAATGGCGAGCACCT 60.435 61.111 0.00 0.00 0.00 4.00
1861 1882 2.034879 CGTCAATGGCGAGCACCTT 61.035 57.895 0.00 0.00 0.00 3.50
1862 1883 1.503542 GTCAATGGCGAGCACCTTG 59.496 57.895 0.00 0.00 0.00 3.61
1863 1884 1.675310 TCAATGGCGAGCACCTTGG 60.675 57.895 0.00 0.00 0.00 3.61
1864 1885 3.064324 AATGGCGAGCACCTTGGC 61.064 61.111 0.00 0.00 40.35 4.52
1871 1892 3.241530 AGCACCTTGGCTCCGTCA 61.242 61.111 0.00 0.00 41.05 4.35
1872 1893 3.050275 GCACCTTGGCTCCGTCAC 61.050 66.667 0.00 0.00 0.00 3.67
1873 1894 2.358737 CACCTTGGCTCCGTCACC 60.359 66.667 0.00 0.00 0.00 4.02
1874 1895 3.637273 ACCTTGGCTCCGTCACCC 61.637 66.667 0.00 0.00 0.00 4.61
1875 1896 3.322466 CCTTGGCTCCGTCACCCT 61.322 66.667 0.00 0.00 0.00 4.34
1876 1897 2.266055 CTTGGCTCCGTCACCCTC 59.734 66.667 0.00 0.00 0.00 4.30
1877 1898 2.525629 TTGGCTCCGTCACCCTCA 60.526 61.111 0.00 0.00 0.00 3.86
1878 1899 1.903877 CTTGGCTCCGTCACCCTCAT 61.904 60.000 0.00 0.00 0.00 2.90
1879 1900 2.184020 TTGGCTCCGTCACCCTCATG 62.184 60.000 0.00 0.00 0.00 3.07
1880 1901 2.512515 GCTCCGTCACCCTCATGC 60.513 66.667 0.00 0.00 0.00 4.06
1881 1902 2.187946 CTCCGTCACCCTCATGCC 59.812 66.667 0.00 0.00 0.00 4.40
1882 1903 3.391665 CTCCGTCACCCTCATGCCC 62.392 68.421 0.00 0.00 0.00 5.36
1883 1904 4.838152 CCGTCACCCTCATGCCCG 62.838 72.222 0.00 0.00 0.00 6.13
1884 1905 4.838152 CGTCACCCTCATGCCCGG 62.838 72.222 0.00 0.00 0.00 5.73
1885 1906 4.489771 GTCACCCTCATGCCCGGG 62.490 72.222 19.09 19.09 46.26 5.73
1899 1920 4.181010 CGGGGCCACATCCCTCTG 62.181 72.222 5.46 0.00 45.80 3.35
1900 1921 4.512914 GGGGCCACATCCCTCTGC 62.513 72.222 4.39 0.00 45.80 4.26
1901 1922 4.864334 GGGCCACATCCCTCTGCG 62.864 72.222 4.39 0.00 43.13 5.18
1902 1923 4.864334 GGCCACATCCCTCTGCGG 62.864 72.222 0.00 0.00 0.00 5.69
1904 1925 4.100084 CCACATCCCTCTGCGGCA 62.100 66.667 1.29 1.29 0.00 5.69
1905 1926 2.191375 CACATCCCTCTGCGGCAT 59.809 61.111 1.75 0.00 0.00 4.40
1906 1927 2.184830 CACATCCCTCTGCGGCATG 61.185 63.158 1.75 0.00 0.00 4.06
1907 1928 2.191375 CATCCCTCTGCGGCATGT 59.809 61.111 1.75 0.00 0.00 3.21
1908 1929 1.337384 ACATCCCTCTGCGGCATGTA 61.337 55.000 1.75 0.00 0.00 2.29
1909 1930 0.602106 CATCCCTCTGCGGCATGTAG 60.602 60.000 1.75 1.52 0.00 2.74
1910 1931 1.762522 ATCCCTCTGCGGCATGTAGG 61.763 60.000 15.52 15.52 0.00 3.18
1911 1932 2.434843 CCCTCTGCGGCATGTAGGA 61.435 63.158 21.23 7.92 0.00 2.94
1912 1933 1.227380 CCTCTGCGGCATGTAGGAC 60.227 63.158 16.86 0.00 0.00 3.85
1913 1934 1.589993 CTCTGCGGCATGTAGGACG 60.590 63.158 1.75 0.00 43.80 4.79
1917 1938 3.323000 CGGCATGTAGGACGCATG 58.677 61.111 0.00 0.00 44.62 4.06
1921 1942 2.766239 CATGTAGGACGCATGCACA 58.234 52.632 19.57 14.26 37.50 4.57
1922 1943 1.085893 CATGTAGGACGCATGCACAA 58.914 50.000 19.57 0.62 37.50 3.33
1923 1944 1.086696 ATGTAGGACGCATGCACAAC 58.913 50.000 19.57 12.62 0.00 3.32
1924 1945 0.953471 TGTAGGACGCATGCACAACC 60.953 55.000 19.57 14.04 0.00 3.77
1925 1946 0.953471 GTAGGACGCATGCACAACCA 60.953 55.000 19.57 3.60 0.00 3.67
1926 1947 0.953471 TAGGACGCATGCACAACCAC 60.953 55.000 19.57 0.00 0.00 4.16
1927 1948 2.127270 GACGCATGCACAACCACG 60.127 61.111 19.57 0.50 0.00 4.94
1928 1949 3.593551 GACGCATGCACAACCACGG 62.594 63.158 19.57 0.00 0.00 4.94
1929 1950 3.659092 CGCATGCACAACCACGGT 61.659 61.111 19.57 0.00 0.00 4.83
1930 1951 2.050168 GCATGCACAACCACGGTG 60.050 61.111 14.21 0.00 39.25 4.94
1931 1952 2.844451 GCATGCACAACCACGGTGT 61.844 57.895 14.21 0.00 38.51 4.16
1932 1953 1.511318 GCATGCACAACCACGGTGTA 61.511 55.000 14.21 0.00 38.51 2.90
1933 1954 0.516877 CATGCACAACCACGGTGTAG 59.483 55.000 7.45 0.00 38.51 2.74
1934 1955 0.107831 ATGCACAACCACGGTGTAGT 59.892 50.000 7.45 0.00 38.51 2.73
1935 1956 0.531090 TGCACAACCACGGTGTAGTC 60.531 55.000 7.45 0.00 38.51 2.59
1936 1957 0.531090 GCACAACCACGGTGTAGTCA 60.531 55.000 7.45 0.00 38.51 3.41
1937 1958 1.214367 CACAACCACGGTGTAGTCAC 58.786 55.000 7.45 0.00 43.19 3.67
1946 1967 2.138595 GTGTAGTCACCCCACACCA 58.861 57.895 0.00 0.00 37.24 4.17
1947 1968 0.250166 GTGTAGTCACCCCACACCAC 60.250 60.000 0.00 0.00 37.24 4.16
1948 1969 1.005394 GTAGTCACCCCACACCACG 60.005 63.158 0.00 0.00 0.00 4.94
1949 1970 2.874664 TAGTCACCCCACACCACGC 61.875 63.158 0.00 0.00 0.00 5.34
1950 1971 4.250305 GTCACCCCACACCACGCT 62.250 66.667 0.00 0.00 0.00 5.07
1951 1972 4.248842 TCACCCCACACCACGCTG 62.249 66.667 0.00 0.00 0.00 5.18
1952 1973 4.248842 CACCCCACACCACGCTGA 62.249 66.667 0.00 0.00 0.00 4.26
1953 1974 3.941188 ACCCCACACCACGCTGAG 61.941 66.667 0.00 0.00 0.00 3.35
1957 1978 4.320456 CACACCACGCTGAGCCCT 62.320 66.667 0.00 0.00 0.00 5.19
1958 1979 3.560251 ACACCACGCTGAGCCCTT 61.560 61.111 0.00 0.00 0.00 3.95
1959 1980 3.052082 CACCACGCTGAGCCCTTG 61.052 66.667 0.00 0.00 0.00 3.61
1962 1983 4.711949 CACGCTGAGCCCTTGCCT 62.712 66.667 0.00 0.00 38.69 4.75
1963 1984 4.400961 ACGCTGAGCCCTTGCCTC 62.401 66.667 0.00 0.00 38.69 4.70
1965 1986 4.039092 GCTGAGCCCTTGCCTCCA 62.039 66.667 0.00 0.00 38.69 3.86
1966 1987 3.004951 CTGAGCCCTTGCCTCCAT 58.995 61.111 0.00 0.00 38.69 3.41
1967 1988 1.453379 CTGAGCCCTTGCCTCCATG 60.453 63.158 0.00 0.00 38.69 3.66
1968 1989 2.832201 GAGCCCTTGCCTCCATGC 60.832 66.667 0.00 0.00 38.69 4.06
1969 1990 3.345028 AGCCCTTGCCTCCATGCT 61.345 61.111 0.00 0.00 38.69 3.79
1970 1991 1.987807 GAGCCCTTGCCTCCATGCTA 61.988 60.000 0.00 0.00 38.69 3.49
1971 1992 1.825622 GCCCTTGCCTCCATGCTAC 60.826 63.158 0.00 0.00 0.00 3.58
1972 1993 1.152881 CCCTTGCCTCCATGCTACC 60.153 63.158 0.00 0.00 0.00 3.18
1973 1994 1.639635 CCCTTGCCTCCATGCTACCT 61.640 60.000 0.00 0.00 0.00 3.08
1974 1995 0.179034 CCTTGCCTCCATGCTACCTC 60.179 60.000 0.00 0.00 0.00 3.85
1975 1996 0.835941 CTTGCCTCCATGCTACCTCT 59.164 55.000 0.00 0.00 0.00 3.69
1976 1997 1.211457 CTTGCCTCCATGCTACCTCTT 59.789 52.381 0.00 0.00 0.00 2.85
1977 1998 0.543277 TGCCTCCATGCTACCTCTTG 59.457 55.000 0.00 0.00 0.00 3.02
1978 1999 0.833287 GCCTCCATGCTACCTCTTGA 59.167 55.000 0.00 0.00 0.00 3.02
1979 2000 1.202627 GCCTCCATGCTACCTCTTGAG 60.203 57.143 0.00 0.00 0.00 3.02
1980 2001 1.202627 CCTCCATGCTACCTCTTGAGC 60.203 57.143 0.00 0.00 39.25 4.26
1984 2005 3.465990 TGCTACCTCTTGAGCATGC 57.534 52.632 10.51 10.51 43.64 4.06
1985 2006 0.614812 TGCTACCTCTTGAGCATGCA 59.385 50.000 21.98 0.00 43.64 3.96
1986 2007 1.211212 TGCTACCTCTTGAGCATGCAT 59.789 47.619 21.98 4.75 43.64 3.96
1987 2008 2.295885 GCTACCTCTTGAGCATGCATT 58.704 47.619 21.98 0.00 38.62 3.56
1988 2009 2.033049 GCTACCTCTTGAGCATGCATTG 59.967 50.000 21.98 7.05 38.62 2.82
1989 2010 1.471119 ACCTCTTGAGCATGCATTGG 58.529 50.000 21.98 14.40 0.00 3.16
1990 2011 1.272313 ACCTCTTGAGCATGCATTGGT 60.272 47.619 21.98 15.02 39.22 3.67
1991 2012 1.822990 CCTCTTGAGCATGCATTGGTT 59.177 47.619 21.98 0.00 35.82 3.67
1992 2013 2.232941 CCTCTTGAGCATGCATTGGTTT 59.767 45.455 21.98 0.00 35.82 3.27
1993 2014 3.306502 CCTCTTGAGCATGCATTGGTTTT 60.307 43.478 21.98 0.00 35.82 2.43
1994 2015 3.916761 TCTTGAGCATGCATTGGTTTTC 58.083 40.909 21.98 6.41 35.82 2.29
1995 2016 2.747396 TGAGCATGCATTGGTTTTCC 57.253 45.000 21.98 0.00 35.82 3.13
1996 2017 1.275856 TGAGCATGCATTGGTTTTCCC 59.724 47.619 21.98 0.00 39.73 3.97
1997 2018 1.551883 GAGCATGCATTGGTTTTCCCT 59.448 47.619 21.98 0.00 39.73 4.20
1998 2019 1.980036 AGCATGCATTGGTTTTCCCTT 59.020 42.857 21.98 0.00 39.73 3.95
1999 2020 2.078392 GCATGCATTGGTTTTCCCTTG 58.922 47.619 14.21 0.00 39.73 3.61
2000 2021 2.289569 GCATGCATTGGTTTTCCCTTGA 60.290 45.455 14.21 0.00 39.73 3.02
2001 2022 3.806507 GCATGCATTGGTTTTCCCTTGAA 60.807 43.478 14.21 0.00 39.73 2.69
2002 2023 3.749665 TGCATTGGTTTTCCCTTGAAG 57.250 42.857 0.00 0.00 39.73 3.02
2003 2024 3.303938 TGCATTGGTTTTCCCTTGAAGA 58.696 40.909 0.00 0.00 39.73 2.87
2004 2025 3.321682 TGCATTGGTTTTCCCTTGAAGAG 59.678 43.478 0.00 0.00 39.73 2.85
2005 2026 3.306294 GCATTGGTTTTCCCTTGAAGAGG 60.306 47.826 0.00 0.00 45.86 3.69
2017 2038 2.496899 TGAAGAGGAAAGGGTGATGC 57.503 50.000 0.00 0.00 0.00 3.91
2018 2039 1.704628 TGAAGAGGAAAGGGTGATGCA 59.295 47.619 0.00 0.00 0.00 3.96
2019 2040 2.290514 TGAAGAGGAAAGGGTGATGCAG 60.291 50.000 0.00 0.00 0.00 4.41
2020 2041 0.034670 AGAGGAAAGGGTGATGCAGC 60.035 55.000 0.00 0.00 0.00 5.25
2021 2042 0.322816 GAGGAAAGGGTGATGCAGCA 60.323 55.000 0.00 0.00 33.07 4.41
2022 2043 0.112995 AGGAAAGGGTGATGCAGCAA 59.887 50.000 6.05 0.00 33.07 3.91
2023 2044 0.968405 GGAAAGGGTGATGCAGCAAA 59.032 50.000 6.05 0.00 33.07 3.68
2024 2045 1.067354 GGAAAGGGTGATGCAGCAAAG 60.067 52.381 6.05 0.00 33.07 2.77
2025 2046 1.615392 GAAAGGGTGATGCAGCAAAGT 59.385 47.619 6.05 0.00 33.07 2.66
2026 2047 2.584835 AAGGGTGATGCAGCAAAGTA 57.415 45.000 6.05 0.00 33.07 2.24
2027 2048 2.119801 AGGGTGATGCAGCAAAGTAG 57.880 50.000 6.05 0.00 33.07 2.57
2028 2049 0.453390 GGGTGATGCAGCAAAGTAGC 59.547 55.000 6.05 0.00 33.07 3.58
2029 2050 0.097674 GGTGATGCAGCAAAGTAGCG 59.902 55.000 6.05 0.00 40.15 4.26
2030 2051 0.798776 GTGATGCAGCAAAGTAGCGT 59.201 50.000 6.05 0.00 40.15 5.07
2031 2052 1.999735 GTGATGCAGCAAAGTAGCGTA 59.000 47.619 6.05 0.00 40.15 4.42
2032 2053 2.415168 GTGATGCAGCAAAGTAGCGTAA 59.585 45.455 6.05 0.00 40.15 3.18
2033 2054 2.672874 TGATGCAGCAAAGTAGCGTAAG 59.327 45.455 0.00 0.00 40.15 2.34
2034 2055 2.163818 TGCAGCAAAGTAGCGTAAGT 57.836 45.000 0.00 0.00 40.15 2.24
2035 2056 3.306917 TGCAGCAAAGTAGCGTAAGTA 57.693 42.857 0.00 0.00 40.15 2.24
2036 2057 3.857052 TGCAGCAAAGTAGCGTAAGTAT 58.143 40.909 0.00 0.00 40.15 2.12
2037 2058 4.250464 TGCAGCAAAGTAGCGTAAGTATT 58.750 39.130 0.00 0.00 40.15 1.89
2038 2059 4.693566 TGCAGCAAAGTAGCGTAAGTATTT 59.306 37.500 0.00 0.00 40.15 1.40
2039 2060 5.163893 TGCAGCAAAGTAGCGTAAGTATTTC 60.164 40.000 0.00 0.00 40.15 2.17
2040 2061 5.726963 GCAGCAAAGTAGCGTAAGTATTTCC 60.727 44.000 0.00 0.00 40.15 3.13
2041 2062 4.874396 AGCAAAGTAGCGTAAGTATTTCCC 59.126 41.667 0.00 0.00 40.15 3.97
2042 2063 4.874396 GCAAAGTAGCGTAAGTATTTCCCT 59.126 41.667 0.00 0.00 41.68 4.20
2043 2064 5.006455 GCAAAGTAGCGTAAGTATTTCCCTC 59.994 44.000 0.00 0.00 41.68 4.30
2044 2065 5.927281 AAGTAGCGTAAGTATTTCCCTCA 57.073 39.130 0.00 0.00 41.68 3.86
2045 2066 5.517322 AGTAGCGTAAGTATTTCCCTCAG 57.483 43.478 0.00 0.00 41.68 3.35
2046 2067 4.954826 AGTAGCGTAAGTATTTCCCTCAGT 59.045 41.667 0.00 0.00 41.68 3.41
2047 2068 4.820894 AGCGTAAGTATTTCCCTCAGTT 57.179 40.909 0.00 0.00 41.68 3.16
2048 2069 5.161943 AGCGTAAGTATTTCCCTCAGTTT 57.838 39.130 0.00 0.00 41.68 2.66
2049 2070 5.557866 AGCGTAAGTATTTCCCTCAGTTTT 58.442 37.500 0.00 0.00 41.68 2.43
2050 2071 6.002082 AGCGTAAGTATTTCCCTCAGTTTTT 58.998 36.000 0.00 0.00 41.68 1.94
2051 2072 6.072673 AGCGTAAGTATTTCCCTCAGTTTTTG 60.073 38.462 0.00 0.00 41.68 2.44
2052 2073 6.072893 GCGTAAGTATTTCCCTCAGTTTTTGA 60.073 38.462 0.00 0.00 41.68 2.69
2053 2074 7.834316 GCGTAAGTATTTCCCTCAGTTTTTGAG 60.834 40.741 0.00 0.00 46.36 3.02
2065 2086 6.877611 TCAGTTTTTGAGAACCAAGGTATC 57.122 37.500 0.00 0.00 35.94 2.24
2066 2087 6.361433 TCAGTTTTTGAGAACCAAGGTATCA 58.639 36.000 0.00 0.00 35.94 2.15
2067 2088 6.831353 TCAGTTTTTGAGAACCAAGGTATCAA 59.169 34.615 13.02 13.02 35.94 2.57
2068 2089 7.505585 TCAGTTTTTGAGAACCAAGGTATCAAT 59.494 33.333 16.11 4.02 35.41 2.57
2069 2090 7.809806 CAGTTTTTGAGAACCAAGGTATCAATC 59.190 37.037 16.11 11.55 35.41 2.67
2070 2091 6.834168 TTTTGAGAACCAAGGTATCAATCC 57.166 37.500 16.11 0.00 35.41 3.01
2071 2092 5.512942 TTGAGAACCAAGGTATCAATCCA 57.487 39.130 13.02 0.00 32.60 3.41
2072 2093 5.102953 TGAGAACCAAGGTATCAATCCAG 57.897 43.478 4.99 0.00 0.00 3.86
2073 2094 4.536090 TGAGAACCAAGGTATCAATCCAGT 59.464 41.667 4.99 0.00 0.00 4.00
2074 2095 5.724370 TGAGAACCAAGGTATCAATCCAGTA 59.276 40.000 4.99 0.00 0.00 2.74
2075 2096 6.127054 TGAGAACCAAGGTATCAATCCAGTAG 60.127 42.308 4.99 0.00 0.00 2.57
2076 2097 5.131142 AGAACCAAGGTATCAATCCAGTAGG 59.869 44.000 0.00 0.00 0.00 3.18
2087 2108 1.180029 TCCAGTAGGAGGTTACACGC 58.820 55.000 0.00 0.00 39.61 5.34
2088 2109 0.892755 CCAGTAGGAGGTTACACGCA 59.107 55.000 0.00 0.00 36.89 5.24
2089 2110 1.274167 CCAGTAGGAGGTTACACGCAA 59.726 52.381 0.00 0.00 36.89 4.85
2090 2111 2.674177 CCAGTAGGAGGTTACACGCAAG 60.674 54.545 0.00 0.00 40.16 4.01
2092 2113 6.921184 CCAGTAGGAGGTTACACGCAAGTC 62.921 54.167 0.00 0.00 44.98 3.01
2105 2126 2.162716 CAAGTCGCCTTGTACCTGC 58.837 57.895 0.00 0.00 42.61 4.85
2106 2127 0.602638 CAAGTCGCCTTGTACCTGCA 60.603 55.000 0.00 0.00 42.61 4.41
2107 2128 0.602905 AAGTCGCCTTGTACCTGCAC 60.603 55.000 0.00 0.00 0.00 4.57
2108 2129 1.301401 GTCGCCTTGTACCTGCACA 60.301 57.895 0.00 0.00 0.00 4.57
2109 2130 0.882927 GTCGCCTTGTACCTGCACAA 60.883 55.000 0.00 0.00 36.94 3.33
2110 2131 0.179043 TCGCCTTGTACCTGCACAAA 60.179 50.000 0.00 0.00 37.93 2.83
2111 2132 0.040425 CGCCTTGTACCTGCACAAAC 60.040 55.000 0.00 0.00 37.93 2.93
2112 2133 1.028905 GCCTTGTACCTGCACAAACA 58.971 50.000 0.00 0.00 37.93 2.83
2113 2134 1.407258 GCCTTGTACCTGCACAAACAA 59.593 47.619 0.00 3.70 37.93 2.83
2114 2135 2.159170 GCCTTGTACCTGCACAAACAAA 60.159 45.455 4.96 0.00 37.93 2.83
2115 2136 3.492482 GCCTTGTACCTGCACAAACAAAT 60.492 43.478 4.96 0.00 37.93 2.32
2116 2137 4.261825 GCCTTGTACCTGCACAAACAAATA 60.262 41.667 4.96 0.00 37.93 1.40
2117 2138 5.737635 GCCTTGTACCTGCACAAACAAATAA 60.738 40.000 4.96 0.00 37.93 1.40
2118 2139 5.920273 CCTTGTACCTGCACAAACAAATAAG 59.080 40.000 4.96 0.00 37.93 1.73
2119 2140 6.238897 CCTTGTACCTGCACAAACAAATAAGA 60.239 38.462 4.96 0.00 37.93 2.10
2120 2141 6.701145 TGTACCTGCACAAACAAATAAGAA 57.299 33.333 0.00 0.00 0.00 2.52
2121 2142 6.500041 TGTACCTGCACAAACAAATAAGAAC 58.500 36.000 0.00 0.00 0.00 3.01
2122 2143 4.944048 ACCTGCACAAACAAATAAGAACC 58.056 39.130 0.00 0.00 0.00 3.62
2123 2144 4.649218 ACCTGCACAAACAAATAAGAACCT 59.351 37.500 0.00 0.00 0.00 3.50
2124 2145 5.128663 ACCTGCACAAACAAATAAGAACCTT 59.871 36.000 0.00 0.00 0.00 3.50
2125 2146 5.463061 CCTGCACAAACAAATAAGAACCTTG 59.537 40.000 0.00 0.00 0.00 3.61
2126 2147 4.808364 TGCACAAACAAATAAGAACCTTGC 59.192 37.500 0.00 0.00 0.00 4.01
2127 2148 4.808364 GCACAAACAAATAAGAACCTTGCA 59.192 37.500 0.00 0.00 0.00 4.08
2128 2149 5.293079 GCACAAACAAATAAGAACCTTGCAA 59.707 36.000 0.00 0.00 0.00 4.08
2129 2150 6.704819 CACAAACAAATAAGAACCTTGCAAC 58.295 36.000 0.00 0.00 0.00 4.17
2130 2151 5.815222 ACAAACAAATAAGAACCTTGCAACC 59.185 36.000 0.00 0.00 0.00 3.77
2131 2152 5.606348 AACAAATAAGAACCTTGCAACCA 57.394 34.783 0.00 0.00 0.00 3.67
2132 2153 5.606348 ACAAATAAGAACCTTGCAACCAA 57.394 34.783 0.00 0.00 0.00 3.67
2133 2154 5.356426 ACAAATAAGAACCTTGCAACCAAC 58.644 37.500 0.00 0.00 0.00 3.77
2134 2155 3.915437 ATAAGAACCTTGCAACCAACG 57.085 42.857 0.00 0.00 0.00 4.10
2135 2156 0.102300 AAGAACCTTGCAACCAACGC 59.898 50.000 0.00 0.00 0.00 4.84
2136 2157 1.657181 GAACCTTGCAACCAACGCG 60.657 57.895 3.53 3.53 0.00 6.01
2137 2158 2.054140 GAACCTTGCAACCAACGCGA 62.054 55.000 15.93 0.00 0.00 5.87
2138 2159 1.452145 AACCTTGCAACCAACGCGAT 61.452 50.000 15.93 0.00 0.00 4.58
2139 2160 0.604243 ACCTTGCAACCAACGCGATA 60.604 50.000 15.93 0.00 0.00 2.92
2140 2161 0.519519 CCTTGCAACCAACGCGATAA 59.480 50.000 15.93 0.00 0.00 1.75
2141 2162 1.068885 CCTTGCAACCAACGCGATAAA 60.069 47.619 15.93 0.00 0.00 1.40
2142 2163 2.241722 CTTGCAACCAACGCGATAAAG 58.758 47.619 15.93 0.00 0.00 1.85
2143 2164 0.519519 TGCAACCAACGCGATAAAGG 59.480 50.000 15.93 9.35 0.00 3.11
2144 2165 0.179174 GCAACCAACGCGATAAAGGG 60.179 55.000 15.93 7.02 0.00 3.95
2145 2166 0.450184 CAACCAACGCGATAAAGGGG 59.550 55.000 15.93 0.00 0.00 4.79
2146 2167 0.037160 AACCAACGCGATAAAGGGGT 59.963 50.000 15.93 0.15 0.00 4.95
2147 2168 0.037160 ACCAACGCGATAAAGGGGTT 59.963 50.000 15.93 0.00 40.63 4.11
2148 2169 3.988459 CAACGCGATAAAGGGGTTG 57.012 52.632 15.93 0.00 46.85 3.77
2149 2170 1.161843 CAACGCGATAAAGGGGTTGT 58.838 50.000 15.93 0.00 46.81 3.32
2150 2171 1.129811 CAACGCGATAAAGGGGTTGTC 59.870 52.381 15.93 0.00 46.81 3.18
2151 2172 0.322322 ACGCGATAAAGGGGTTGTCA 59.678 50.000 15.93 0.00 0.00 3.58
2152 2173 1.270947 ACGCGATAAAGGGGTTGTCAA 60.271 47.619 15.93 0.00 0.00 3.18
2153 2174 2.014128 CGCGATAAAGGGGTTGTCAAT 58.986 47.619 0.00 0.00 0.00 2.57
2154 2175 2.031683 CGCGATAAAGGGGTTGTCAATC 59.968 50.000 0.00 0.00 0.00 2.67
2155 2176 2.357952 GCGATAAAGGGGTTGTCAATCC 59.642 50.000 6.29 6.29 0.00 3.01
2156 2177 2.949644 CGATAAAGGGGTTGTCAATCCC 59.050 50.000 24.64 24.64 42.73 3.85
2161 2182 1.545841 GGGGTTGTCAATCCCTTCAC 58.454 55.000 24.72 0.00 43.00 3.18
2162 2183 1.165270 GGGTTGTCAATCCCTTCACG 58.835 55.000 3.15 0.00 40.48 4.35
2163 2184 1.271163 GGGTTGTCAATCCCTTCACGA 60.271 52.381 3.15 0.00 40.48 4.35
2164 2185 1.804748 GGTTGTCAATCCCTTCACGAC 59.195 52.381 0.00 0.00 0.00 4.34
2165 2186 1.804748 GTTGTCAATCCCTTCACGACC 59.195 52.381 0.00 0.00 0.00 4.79
2166 2187 1.052617 TGTCAATCCCTTCACGACCA 58.947 50.000 0.00 0.00 0.00 4.02
2167 2188 1.270625 TGTCAATCCCTTCACGACCAC 60.271 52.381 0.00 0.00 0.00 4.16
2168 2189 1.002087 GTCAATCCCTTCACGACCACT 59.998 52.381 0.00 0.00 0.00 4.00
2169 2190 1.697432 TCAATCCCTTCACGACCACTT 59.303 47.619 0.00 0.00 0.00 3.16
2170 2191 1.806542 CAATCCCTTCACGACCACTTG 59.193 52.381 0.00 0.00 0.00 3.16
2171 2192 0.321653 ATCCCTTCACGACCACTTGC 60.322 55.000 0.00 0.00 0.00 4.01
2172 2193 1.227823 CCCTTCACGACCACTTGCA 60.228 57.895 0.00 0.00 0.00 4.08
2173 2194 0.817634 CCCTTCACGACCACTTGCAA 60.818 55.000 0.00 0.00 0.00 4.08
2174 2195 1.021202 CCTTCACGACCACTTGCAAA 58.979 50.000 0.00 0.00 0.00 3.68
2175 2196 1.403679 CCTTCACGACCACTTGCAAAA 59.596 47.619 0.00 0.00 0.00 2.44
2176 2197 2.450160 CTTCACGACCACTTGCAAAAC 58.550 47.619 0.00 0.00 0.00 2.43
2177 2198 1.745232 TCACGACCACTTGCAAAACT 58.255 45.000 0.00 0.00 0.00 2.66
2178 2199 1.400142 TCACGACCACTTGCAAAACTG 59.600 47.619 0.00 0.00 0.00 3.16
2179 2200 1.400142 CACGACCACTTGCAAAACTGA 59.600 47.619 0.00 0.00 0.00 3.41
2180 2201 1.670811 ACGACCACTTGCAAAACTGAG 59.329 47.619 0.00 0.00 0.00 3.35
2181 2202 1.939934 CGACCACTTGCAAAACTGAGA 59.060 47.619 0.00 0.00 0.00 3.27
2182 2203 2.549754 CGACCACTTGCAAAACTGAGAT 59.450 45.455 0.00 0.00 0.00 2.75
2183 2204 3.364366 CGACCACTTGCAAAACTGAGATC 60.364 47.826 0.00 0.00 0.00 2.75
2184 2205 3.817647 GACCACTTGCAAAACTGAGATCT 59.182 43.478 0.00 0.00 0.00 2.75
2185 2206 3.567164 ACCACTTGCAAAACTGAGATCTG 59.433 43.478 0.00 0.00 0.00 2.90
2186 2207 3.817084 CCACTTGCAAAACTGAGATCTGA 59.183 43.478 0.00 0.00 0.00 3.27
2187 2208 4.458295 CCACTTGCAAAACTGAGATCTGAT 59.542 41.667 0.00 0.00 0.00 2.90
2188 2209 5.645067 CCACTTGCAAAACTGAGATCTGATA 59.355 40.000 0.00 0.00 0.00 2.15
2189 2210 6.183360 CCACTTGCAAAACTGAGATCTGATAG 60.183 42.308 0.00 0.00 0.00 2.08
2190 2211 6.592994 CACTTGCAAAACTGAGATCTGATAGA 59.407 38.462 0.00 0.00 0.00 1.98
2191 2212 6.817641 ACTTGCAAAACTGAGATCTGATAGAG 59.182 38.462 0.00 0.00 0.00 2.43
2192 2213 6.535963 TGCAAAACTGAGATCTGATAGAGA 57.464 37.500 0.00 0.00 34.25 3.10
2193 2214 7.122138 TGCAAAACTGAGATCTGATAGAGAT 57.878 36.000 0.00 0.00 44.78 2.75
2194 2215 8.242729 TGCAAAACTGAGATCTGATAGAGATA 57.757 34.615 0.00 0.00 41.91 1.98
2195 2216 8.699130 TGCAAAACTGAGATCTGATAGAGATAA 58.301 33.333 0.00 0.00 41.91 1.75
2196 2217 9.709495 GCAAAACTGAGATCTGATAGAGATAAT 57.291 33.333 0.00 0.00 41.91 1.28
2280 2301 7.969536 AATAGATCGGAAACTTGTATGATGG 57.030 36.000 0.00 0.00 0.00 3.51
2281 2302 5.614324 AGATCGGAAACTTGTATGATGGA 57.386 39.130 0.00 0.00 0.00 3.41
2282 2303 5.989477 AGATCGGAAACTTGTATGATGGAA 58.011 37.500 0.00 0.00 0.00 3.53
2283 2304 6.414732 AGATCGGAAACTTGTATGATGGAAA 58.585 36.000 0.00 0.00 0.00 3.13
2284 2305 6.884295 AGATCGGAAACTTGTATGATGGAAAA 59.116 34.615 0.00 0.00 0.00 2.29
2285 2306 7.557719 AGATCGGAAACTTGTATGATGGAAAAT 59.442 33.333 0.00 0.00 0.00 1.82
2286 2307 7.461182 TCGGAAACTTGTATGATGGAAAATT 57.539 32.000 0.00 0.00 0.00 1.82
2287 2308 8.568676 TCGGAAACTTGTATGATGGAAAATTA 57.431 30.769 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 1.374758 AAGAAGACGAAGGCCAGCG 60.375 57.895 14.69 14.69 0.00 5.18
46 47 2.126071 CAACGACGATGACCCGCT 60.126 61.111 0.00 0.00 0.00 5.52
54 55 2.181021 GCCGAGGACAACGACGAT 59.819 61.111 0.00 0.00 0.00 3.73
252 256 2.671351 CGACGCTAAGCAGAGGAAGAAA 60.671 50.000 0.00 0.00 0.00 2.52
264 268 4.666728 GTCTCCGACGACGCTAAG 57.333 61.111 0.64 0.00 38.29 2.18
332 336 0.179000 GACGCTGATTCCTGACCCAT 59.821 55.000 0.00 0.00 0.00 4.00
367 371 1.379443 CAGTGCACATGAGGGCCAT 60.379 57.895 21.04 0.00 35.44 4.40
379 383 2.026542 AGAAGGAATCAGATGCAGTGCA 60.027 45.455 22.22 22.22 44.86 4.57
472 476 1.296715 CCTTCTTCCTCGGGTGGTG 59.703 63.158 0.00 0.00 0.00 4.17
551 555 1.630369 CAACCTTCCTCCTGTCCATCA 59.370 52.381 0.00 0.00 0.00 3.07
558 562 1.694150 TCACTGTCAACCTTCCTCCTG 59.306 52.381 0.00 0.00 0.00 3.86
648 654 0.244994 ACGGCATGACTGTCACTCTC 59.755 55.000 13.50 2.57 29.10 3.20
703 709 1.839354 TCATGGAGTCAGGCATAGCAA 59.161 47.619 0.00 0.00 0.00 3.91
708 714 3.021695 CACAATTCATGGAGTCAGGCAT 58.978 45.455 0.00 0.00 0.00 4.40
791 797 1.377690 TTGGATGAAGGGGGTGCTTA 58.622 50.000 0.00 0.00 0.00 3.09
797 803 1.458209 GGGCATTGGATGAAGGGGG 60.458 63.158 0.00 0.00 0.00 5.40
832 838 4.016706 CTTCCTCGGCGGTGGGTT 62.017 66.667 7.21 0.00 0.00 4.11
900 906 2.356194 GGGCGCTTGTTGCTTTGG 60.356 61.111 7.64 0.00 40.11 3.28
901 907 2.356194 GGGGCGCTTGTTGCTTTG 60.356 61.111 7.64 0.00 40.11 2.77
902 908 2.430610 TTGGGGCGCTTGTTGCTTT 61.431 52.632 7.64 0.00 40.11 3.51
903 909 2.837291 TTGGGGCGCTTGTTGCTT 60.837 55.556 7.64 0.00 40.11 3.91
917 923 0.539986 ATGGTAGTGGCCGTAGTTGG 59.460 55.000 0.00 0.00 0.00 3.77
954 960 0.674895 GGATGACCTTGCAGAAGCGT 60.675 55.000 0.00 0.00 46.23 5.07
956 962 3.566130 AGGATGACCTTGCAGAAGC 57.434 52.632 0.00 0.00 45.36 3.86
1008 1015 1.139058 ACGAAGTGCTTGGTGAAGTCT 59.861 47.619 0.00 0.00 42.51 3.24
1047 1054 2.301346 CCAGTGTTGTTCCTGAGCTTT 58.699 47.619 0.00 0.00 0.00 3.51
1068 1075 1.371183 CGTCACCTTCCAGGAGCAA 59.629 57.895 0.00 0.00 37.67 3.91
1144 1151 4.620589 AGCCGATCTTGATCTGATGAAT 57.379 40.909 8.70 0.00 0.00 2.57
1221 1228 3.181463 TGACGATCTCAATGCCATCATCA 60.181 43.478 0.00 0.00 31.27 3.07
1237 1244 0.250124 TTCCCGCACTTGTTGACGAT 60.250 50.000 0.00 0.00 0.00 3.73
1364 1384 2.953466 TCGATAAGCAGTACCACACC 57.047 50.000 0.00 0.00 0.00 4.16
1419 1440 3.309138 CACACATCATAAGCAGAGCAGAC 59.691 47.826 0.00 0.00 0.00 3.51
1452 1473 4.067896 AGATTACCAACACACTTCAGCAG 58.932 43.478 0.00 0.00 0.00 4.24
1472 1493 2.303022 CCTCTTTGGCTAGTTGGTGAGA 59.697 50.000 0.00 0.00 0.00 3.27
1577 1598 1.152589 TGCATGGGCTGAACCACAA 60.153 52.632 0.00 0.00 44.72 3.33
1613 1634 2.957491 TCTGCAAGTTGTTTGGTTGG 57.043 45.000 4.48 0.00 37.26 3.77
1696 1717 3.951037 TGTTTGGTTGCAGTAGTGAACAT 59.049 39.130 0.42 0.00 0.00 2.71
1722 1743 2.093500 TGGTCGCATGAGAGCATTAAGT 60.093 45.455 24.65 0.00 42.80 2.24
1729 1750 2.131183 GAGTATTGGTCGCATGAGAGC 58.869 52.381 20.06 20.06 38.95 4.09
1730 1751 2.389059 CGAGTATTGGTCGCATGAGAG 58.611 52.381 0.00 0.00 0.00 3.20
1731 1752 1.067060 CCGAGTATTGGTCGCATGAGA 59.933 52.381 0.00 0.00 36.06 3.27
1732 1753 1.491670 CCGAGTATTGGTCGCATGAG 58.508 55.000 0.00 0.00 36.06 2.90
1733 1754 0.104120 CCCGAGTATTGGTCGCATGA 59.896 55.000 0.00 0.00 38.29 3.07
1734 1755 0.179084 ACCCGAGTATTGGTCGCATG 60.179 55.000 0.00 0.00 38.29 4.06
1735 1756 0.539986 AACCCGAGTATTGGTCGCAT 59.460 50.000 0.00 0.00 38.29 4.73
1736 1757 0.108520 GAACCCGAGTATTGGTCGCA 60.109 55.000 0.00 0.00 38.29 5.10
1737 1758 0.808847 GGAACCCGAGTATTGGTCGC 60.809 60.000 0.00 0.00 38.29 5.19
1738 1759 0.533491 TGGAACCCGAGTATTGGTCG 59.467 55.000 0.00 0.00 38.29 4.79
1739 1760 1.553704 ACTGGAACCCGAGTATTGGTC 59.446 52.381 0.00 0.00 38.29 4.02
1740 1761 1.652947 ACTGGAACCCGAGTATTGGT 58.347 50.000 0.00 0.00 38.29 3.67
1741 1762 2.764572 AGTACTGGAACCCGAGTATTGG 59.235 50.000 0.00 0.00 40.35 3.16
1742 1763 5.562307 CGATAGTACTGGAACCCGAGTATTG 60.562 48.000 5.39 0.00 0.00 1.90
1743 1764 4.518211 CGATAGTACTGGAACCCGAGTATT 59.482 45.833 5.39 0.00 0.00 1.89
1744 1765 4.070716 CGATAGTACTGGAACCCGAGTAT 58.929 47.826 5.39 0.00 0.00 2.12
1745 1766 3.470709 CGATAGTACTGGAACCCGAGTA 58.529 50.000 5.39 0.00 0.00 2.59
1746 1767 2.295885 CGATAGTACTGGAACCCGAGT 58.704 52.381 5.39 0.00 0.00 4.18
1761 1782 0.674534 GTGGGCCCTACTCACGATAG 59.325 60.000 25.70 0.00 46.19 2.08
1762 1783 0.757935 GGTGGGCCCTACTCACGATA 60.758 60.000 25.70 0.00 32.65 2.92
1763 1784 2.064581 GGTGGGCCCTACTCACGAT 61.065 63.158 25.70 0.00 32.65 3.73
1764 1785 2.682494 GGTGGGCCCTACTCACGA 60.682 66.667 25.70 0.00 32.65 4.35
1765 1786 3.000819 TGGTGGGCCCTACTCACG 61.001 66.667 25.70 0.00 32.65 4.35
1766 1787 0.616679 TACTGGTGGGCCCTACTCAC 60.617 60.000 25.70 12.48 0.00 3.51
1767 1788 0.117541 TTACTGGTGGGCCCTACTCA 59.882 55.000 25.70 16.62 0.00 3.41
1768 1789 0.831307 CTTACTGGTGGGCCCTACTC 59.169 60.000 25.70 13.25 0.00 2.59
1769 1790 0.118547 ACTTACTGGTGGGCCCTACT 59.881 55.000 25.70 6.59 0.00 2.57
1770 1791 0.989602 AACTTACTGGTGGGCCCTAC 59.010 55.000 25.70 18.94 0.00 3.18
1771 1792 2.474112 CTAACTTACTGGTGGGCCCTA 58.526 52.381 25.70 6.58 0.00 3.53
1772 1793 1.286248 CTAACTTACTGGTGGGCCCT 58.714 55.000 25.70 4.09 0.00 5.19
1773 1794 0.393944 GCTAACTTACTGGTGGGCCC 60.394 60.000 17.59 17.59 0.00 5.80
1774 1795 0.326927 TGCTAACTTACTGGTGGGCC 59.673 55.000 0.00 0.00 0.00 5.80
1775 1796 1.003233 AGTGCTAACTTACTGGTGGGC 59.997 52.381 0.00 0.00 30.14 5.36
1776 1797 2.699954 CAGTGCTAACTTACTGGTGGG 58.300 52.381 0.00 0.00 40.38 4.61
1777 1798 2.076863 GCAGTGCTAACTTACTGGTGG 58.923 52.381 8.18 0.00 43.41 4.61
1778 1799 2.766313 TGCAGTGCTAACTTACTGGTG 58.234 47.619 17.60 0.00 43.41 4.17
1779 1800 3.139077 GTTGCAGTGCTAACTTACTGGT 58.861 45.455 17.60 0.00 43.41 4.00
1780 1801 3.138304 TGTTGCAGTGCTAACTTACTGG 58.862 45.455 17.60 0.00 43.41 4.00
1781 1802 6.668541 ATATGTTGCAGTGCTAACTTACTG 57.331 37.500 17.60 0.00 45.40 2.74
1782 1803 6.655003 ACAATATGTTGCAGTGCTAACTTACT 59.345 34.615 17.60 8.59 38.96 2.24
1783 1804 6.742718 CACAATATGTTGCAGTGCTAACTTAC 59.257 38.462 17.60 5.54 38.96 2.34
1784 1805 6.429692 ACACAATATGTTGCAGTGCTAACTTA 59.570 34.615 17.60 18.42 38.98 2.24
1785 1806 5.241506 ACACAATATGTTGCAGTGCTAACTT 59.758 36.000 17.60 17.09 38.98 2.66
1786 1807 4.761739 ACACAATATGTTGCAGTGCTAACT 59.238 37.500 17.60 10.73 38.98 2.24
1787 1808 5.046910 ACACAATATGTTGCAGTGCTAAC 57.953 39.130 17.60 17.83 38.98 2.34
1788 1809 4.155826 GGACACAATATGTTGCAGTGCTAA 59.844 41.667 17.60 6.28 43.56 3.09
1789 1810 3.689161 GGACACAATATGTTGCAGTGCTA 59.311 43.478 17.60 5.78 43.56 3.49
1790 1811 2.489329 GGACACAATATGTTGCAGTGCT 59.511 45.455 17.60 0.00 43.56 4.40
1791 1812 2.728846 CGGACACAATATGTTGCAGTGC 60.729 50.000 8.58 8.58 43.56 4.40
1792 1813 2.741517 TCGGACACAATATGTTGCAGTG 59.258 45.455 1.57 0.00 43.56 3.66
1793 1814 2.742053 GTCGGACACAATATGTTGCAGT 59.258 45.455 2.62 1.46 43.56 4.40
1794 1815 2.095853 GGTCGGACACAATATGTTGCAG 59.904 50.000 10.76 0.00 43.56 4.41
1795 1816 2.080693 GGTCGGACACAATATGTTGCA 58.919 47.619 10.76 0.00 43.56 4.08
1796 1817 2.095853 CAGGTCGGACACAATATGTTGC 59.904 50.000 10.76 0.00 43.56 4.17
1797 1818 2.095853 GCAGGTCGGACACAATATGTTG 59.904 50.000 10.76 0.00 43.56 3.33
1798 1819 2.356135 GCAGGTCGGACACAATATGTT 58.644 47.619 10.76 0.00 43.56 2.71
1800 1821 1.299541 GGCAGGTCGGACACAATATG 58.700 55.000 10.76 0.21 0.00 1.78
1801 1822 0.179084 CGGCAGGTCGGACACAATAT 60.179 55.000 10.76 0.00 0.00 1.28
1802 1823 1.216977 CGGCAGGTCGGACACAATA 59.783 57.895 10.76 0.00 0.00 1.90
1803 1824 2.047274 CGGCAGGTCGGACACAAT 60.047 61.111 10.76 0.00 0.00 2.71
1804 1825 1.746322 TAACGGCAGGTCGGACACAA 61.746 55.000 10.76 0.00 0.00 3.33
1805 1826 2.201708 TAACGGCAGGTCGGACACA 61.202 57.895 10.76 0.00 0.00 3.72
1806 1827 1.735559 GTAACGGCAGGTCGGACAC 60.736 63.158 10.76 0.00 0.00 3.67
1807 1828 2.652530 GTAACGGCAGGTCGGACA 59.347 61.111 10.76 0.00 0.00 4.02
1808 1829 2.125793 GGTAACGGCAGGTCGGAC 60.126 66.667 0.00 0.00 0.00 4.79
1809 1830 3.384532 GGGTAACGGCAGGTCGGA 61.385 66.667 0.00 0.00 37.60 4.55
1810 1831 3.366739 GAGGGTAACGGCAGGTCGG 62.367 68.421 0.00 0.00 37.60 4.79
1811 1832 1.956629 ATGAGGGTAACGGCAGGTCG 61.957 60.000 0.00 0.00 37.60 4.79
1812 1833 0.462047 CATGAGGGTAACGGCAGGTC 60.462 60.000 0.00 0.00 37.60 3.85
1813 1834 1.602237 CATGAGGGTAACGGCAGGT 59.398 57.895 0.00 0.00 37.60 4.00
1814 1835 1.819632 GCATGAGGGTAACGGCAGG 60.820 63.158 0.00 0.00 37.60 4.85
1815 1836 1.819632 GGCATGAGGGTAACGGCAG 60.820 63.158 0.00 0.00 37.60 4.85
1816 1837 1.847798 AAGGCATGAGGGTAACGGCA 61.848 55.000 0.00 0.00 37.60 5.69
1817 1838 1.077716 AAGGCATGAGGGTAACGGC 60.078 57.895 0.00 0.00 37.60 5.68
1818 1839 0.748005 CCAAGGCATGAGGGTAACGG 60.748 60.000 0.00 0.00 37.60 4.44
1819 1840 0.748005 CCCAAGGCATGAGGGTAACG 60.748 60.000 0.00 0.00 37.81 3.18
1820 1841 3.191182 CCCAAGGCATGAGGGTAAC 57.809 57.895 0.00 0.00 37.81 2.50
1832 1853 1.094785 CCATTGACGTTAGCCCAAGG 58.905 55.000 0.00 0.00 0.00 3.61
1833 1854 0.451783 GCCATTGACGTTAGCCCAAG 59.548 55.000 0.00 0.00 0.00 3.61
1834 1855 1.302383 CGCCATTGACGTTAGCCCAA 61.302 55.000 0.00 0.00 0.00 4.12
1835 1856 1.743623 CGCCATTGACGTTAGCCCA 60.744 57.895 0.00 0.00 0.00 5.36
1836 1857 1.429148 CTCGCCATTGACGTTAGCCC 61.429 60.000 0.00 0.00 0.00 5.19
1837 1858 2.006772 CTCGCCATTGACGTTAGCC 58.993 57.895 0.00 0.00 0.00 3.93
1838 1859 1.348594 GCTCGCCATTGACGTTAGC 59.651 57.895 0.00 0.00 0.00 3.09
1839 1860 0.370273 GTGCTCGCCATTGACGTTAG 59.630 55.000 0.00 0.00 0.00 2.34
1840 1861 1.017177 GGTGCTCGCCATTGACGTTA 61.017 55.000 0.00 0.00 0.00 3.18
1841 1862 2.325082 GGTGCTCGCCATTGACGTT 61.325 57.895 0.00 0.00 0.00 3.99
1842 1863 2.731691 AAGGTGCTCGCCATTGACGT 62.732 55.000 2.02 0.00 0.00 4.34
1843 1864 2.034879 AAGGTGCTCGCCATTGACG 61.035 57.895 2.02 0.00 0.00 4.35
1844 1865 1.503542 CAAGGTGCTCGCCATTGAC 59.496 57.895 2.02 0.00 0.00 3.18
1845 1866 1.675310 CCAAGGTGCTCGCCATTGA 60.675 57.895 2.02 0.00 0.00 2.57
1846 1867 2.879907 CCAAGGTGCTCGCCATTG 59.120 61.111 2.02 4.06 0.00 2.82
1847 1868 3.064324 GCCAAGGTGCTCGCCATT 61.064 61.111 2.02 0.00 0.00 3.16
1848 1869 4.039092 AGCCAAGGTGCTCGCCAT 62.039 61.111 2.02 0.00 36.75 4.40
1854 1875 3.241530 TGACGGAGCCAAGGTGCT 61.242 61.111 0.00 0.00 46.37 4.40
1855 1876 3.050275 GTGACGGAGCCAAGGTGC 61.050 66.667 0.00 0.00 0.00 5.01
1856 1877 2.358737 GGTGACGGAGCCAAGGTG 60.359 66.667 0.00 0.00 0.00 4.00
1857 1878 3.637273 GGGTGACGGAGCCAAGGT 61.637 66.667 0.37 0.00 42.41 3.50
1858 1879 3.316573 GAGGGTGACGGAGCCAAGG 62.317 68.421 7.58 0.00 45.68 3.61
1859 1880 1.903877 ATGAGGGTGACGGAGCCAAG 61.904 60.000 7.58 0.00 45.68 3.61
1860 1881 1.918293 ATGAGGGTGACGGAGCCAA 60.918 57.895 7.58 0.00 45.68 4.52
1861 1882 2.284625 ATGAGGGTGACGGAGCCA 60.285 61.111 7.58 0.00 45.68 4.75
1862 1883 2.187946 CATGAGGGTGACGGAGCC 59.812 66.667 0.00 0.00 43.30 4.70
1863 1884 2.512515 GCATGAGGGTGACGGAGC 60.513 66.667 0.00 0.00 0.00 4.70
1864 1885 2.187946 GGCATGAGGGTGACGGAG 59.812 66.667 0.00 0.00 0.00 4.63
1865 1886 3.399181 GGGCATGAGGGTGACGGA 61.399 66.667 0.00 0.00 0.00 4.69
1866 1887 4.838152 CGGGCATGAGGGTGACGG 62.838 72.222 0.00 0.00 0.00 4.79
1867 1888 4.838152 CCGGGCATGAGGGTGACG 62.838 72.222 0.00 0.00 0.00 4.35
1868 1889 4.489771 CCCGGGCATGAGGGTGAC 62.490 72.222 8.08 0.00 42.67 3.67
1885 1906 4.864334 CCGCAGAGGGATGTGGCC 62.864 72.222 0.00 0.00 43.47 5.36
1893 1914 2.109799 CCTACATGCCGCAGAGGG 59.890 66.667 9.84 1.67 41.48 4.30
1894 1915 1.227380 GTCCTACATGCCGCAGAGG 60.227 63.158 11.04 11.04 44.97 3.69
1895 1916 1.589993 CGTCCTACATGCCGCAGAG 60.590 63.158 0.00 0.00 0.00 3.35
1896 1917 2.494445 CGTCCTACATGCCGCAGA 59.506 61.111 0.00 0.00 0.00 4.26
1897 1918 3.264897 GCGTCCTACATGCCGCAG 61.265 66.667 0.00 0.00 45.12 5.18
1899 1920 2.588877 ATGCGTCCTACATGCCGC 60.589 61.111 0.00 0.00 45.92 6.53
1900 1921 3.323000 CATGCGTCCTACATGCCG 58.677 61.111 0.00 0.00 38.58 5.69
1903 1924 1.085893 TTGTGCATGCGTCCTACATG 58.914 50.000 14.09 0.00 46.19 3.21
1904 1925 1.086696 GTTGTGCATGCGTCCTACAT 58.913 50.000 14.09 0.00 0.00 2.29
1905 1926 0.953471 GGTTGTGCATGCGTCCTACA 60.953 55.000 14.09 8.52 0.00 2.74
1906 1927 0.953471 TGGTTGTGCATGCGTCCTAC 60.953 55.000 14.09 10.08 0.00 3.18
1907 1928 0.953471 GTGGTTGTGCATGCGTCCTA 60.953 55.000 14.09 0.00 0.00 2.94
1908 1929 2.112928 TGGTTGTGCATGCGTCCT 59.887 55.556 14.09 0.00 0.00 3.85
1909 1930 2.255252 GTGGTTGTGCATGCGTCC 59.745 61.111 14.09 12.53 0.00 4.79
1910 1931 2.127270 CGTGGTTGTGCATGCGTC 60.127 61.111 14.09 9.43 0.00 5.19
1911 1932 3.659092 CCGTGGTTGTGCATGCGT 61.659 61.111 14.09 0.00 0.00 5.24
1912 1933 3.659092 ACCGTGGTTGTGCATGCG 61.659 61.111 14.09 0.00 0.00 4.73
1913 1934 1.511318 TACACCGTGGTTGTGCATGC 61.511 55.000 11.82 11.82 37.22 4.06
1914 1935 0.516877 CTACACCGTGGTTGTGCATG 59.483 55.000 3.03 0.00 37.22 4.06
1915 1936 0.107831 ACTACACCGTGGTTGTGCAT 59.892 50.000 3.03 0.00 37.22 3.96
1916 1937 0.531090 GACTACACCGTGGTTGTGCA 60.531 55.000 3.03 0.00 37.22 4.57
1917 1938 0.531090 TGACTACACCGTGGTTGTGC 60.531 55.000 3.03 0.00 37.22 4.57
1918 1939 1.214367 GTGACTACACCGTGGTTGTG 58.786 55.000 3.03 0.00 40.74 3.33
1919 1940 3.673173 GTGACTACACCGTGGTTGT 57.327 52.632 3.03 0.00 40.74 3.32
1928 1949 0.250166 GTGGTGTGGGGTGACTACAC 60.250 60.000 5.56 5.56 45.27 2.90
1929 1950 1.750341 CGTGGTGTGGGGTGACTACA 61.750 60.000 0.00 0.00 0.00 2.74
1930 1951 1.005394 CGTGGTGTGGGGTGACTAC 60.005 63.158 0.00 0.00 0.00 2.73
1931 1952 2.874664 GCGTGGTGTGGGGTGACTA 61.875 63.158 0.00 0.00 0.00 2.59
1932 1953 4.250305 GCGTGGTGTGGGGTGACT 62.250 66.667 0.00 0.00 0.00 3.41
1933 1954 4.250305 AGCGTGGTGTGGGGTGAC 62.250 66.667 0.00 0.00 0.00 3.67
1934 1955 4.248842 CAGCGTGGTGTGGGGTGA 62.249 66.667 0.00 0.00 0.00 4.02
1935 1956 4.248842 TCAGCGTGGTGTGGGGTG 62.249 66.667 0.00 0.00 0.00 4.61
1936 1957 3.941188 CTCAGCGTGGTGTGGGGT 61.941 66.667 0.00 0.00 0.00 4.95
1940 1961 3.832237 AAGGGCTCAGCGTGGTGTG 62.832 63.158 0.00 0.00 0.00 3.82
1941 1962 3.560251 AAGGGCTCAGCGTGGTGT 61.560 61.111 0.00 0.00 0.00 4.16
1942 1963 3.052082 CAAGGGCTCAGCGTGGTG 61.052 66.667 0.00 0.00 0.00 4.17
1945 1966 4.711949 AGGCAAGGGCTCAGCGTG 62.712 66.667 0.00 0.00 40.87 5.34
1952 1973 2.002977 TAGCATGGAGGCAAGGGCT 61.003 57.895 0.00 0.00 42.48 5.19
1953 1974 1.825622 GTAGCATGGAGGCAAGGGC 60.826 63.158 0.00 0.00 40.13 5.19
1954 1975 1.152881 GGTAGCATGGAGGCAAGGG 60.153 63.158 0.00 0.00 35.83 3.95
1955 1976 0.179034 GAGGTAGCATGGAGGCAAGG 60.179 60.000 0.00 0.00 35.83 3.61
1956 1977 0.835941 AGAGGTAGCATGGAGGCAAG 59.164 55.000 0.00 0.00 35.83 4.01
1957 1978 1.065199 CAAGAGGTAGCATGGAGGCAA 60.065 52.381 0.00 0.00 35.83 4.52
1958 1979 0.543277 CAAGAGGTAGCATGGAGGCA 59.457 55.000 0.00 0.00 35.83 4.75
1959 1980 0.833287 TCAAGAGGTAGCATGGAGGC 59.167 55.000 0.00 0.00 0.00 4.70
1960 1981 1.202627 GCTCAAGAGGTAGCATGGAGG 60.203 57.143 0.00 0.00 38.63 4.30
1961 1982 1.483827 TGCTCAAGAGGTAGCATGGAG 59.516 52.381 0.00 0.00 43.56 3.86
1962 1983 1.571955 TGCTCAAGAGGTAGCATGGA 58.428 50.000 0.00 0.00 43.56 3.41
1967 1988 1.964552 ATGCATGCTCAAGAGGTAGC 58.035 50.000 20.33 0.00 39.25 3.58
1968 1989 2.617308 CCAATGCATGCTCAAGAGGTAG 59.383 50.000 20.33 0.00 0.00 3.18
1969 1990 2.025981 ACCAATGCATGCTCAAGAGGTA 60.026 45.455 20.33 0.00 0.00 3.08
1970 1991 1.272313 ACCAATGCATGCTCAAGAGGT 60.272 47.619 20.33 14.42 0.00 3.85
1971 1992 1.471119 ACCAATGCATGCTCAAGAGG 58.529 50.000 20.33 13.80 0.00 3.69
1972 1993 3.587797 AAACCAATGCATGCTCAAGAG 57.412 42.857 20.33 5.41 0.00 2.85
1973 1994 3.306225 GGAAAACCAATGCATGCTCAAGA 60.306 43.478 20.33 0.00 0.00 3.02
1974 1995 2.997986 GGAAAACCAATGCATGCTCAAG 59.002 45.455 20.33 7.98 0.00 3.02
1975 1996 2.289569 GGGAAAACCAATGCATGCTCAA 60.290 45.455 20.33 0.00 39.85 3.02
1976 1997 1.275856 GGGAAAACCAATGCATGCTCA 59.724 47.619 20.33 0.00 39.85 4.26
1977 1998 1.551883 AGGGAAAACCAATGCATGCTC 59.448 47.619 20.33 4.95 43.89 4.26
1978 1999 1.648116 AGGGAAAACCAATGCATGCT 58.352 45.000 20.33 1.07 43.89 3.79
1979 2000 2.078392 CAAGGGAAAACCAATGCATGC 58.922 47.619 11.82 11.82 43.89 4.06
1980 2001 3.681593 TCAAGGGAAAACCAATGCATG 57.318 42.857 0.00 0.00 43.89 4.06
1981 2002 3.903090 TCTTCAAGGGAAAACCAATGCAT 59.097 39.130 0.00 0.00 43.89 3.96
1982 2003 3.303938 TCTTCAAGGGAAAACCAATGCA 58.696 40.909 0.00 0.00 43.89 3.96
1983 2004 3.306294 CCTCTTCAAGGGAAAACCAATGC 60.306 47.826 0.00 0.00 42.03 3.56
1984 2005 4.151883 TCCTCTTCAAGGGAAAACCAATG 58.848 43.478 0.00 0.00 46.23 2.82
1985 2006 4.469469 TCCTCTTCAAGGGAAAACCAAT 57.531 40.909 0.00 0.00 46.23 3.16
1986 2007 3.963476 TCCTCTTCAAGGGAAAACCAA 57.037 42.857 0.00 0.00 46.23 3.67
1987 2008 3.963476 TTCCTCTTCAAGGGAAAACCA 57.037 42.857 5.19 0.00 46.23 3.67
1988 2009 3.574396 CCTTTCCTCTTCAAGGGAAAACC 59.426 47.826 16.45 0.00 42.49 3.27
1989 2010 4.855715 CCTTTCCTCTTCAAGGGAAAAC 57.144 45.455 16.45 0.00 42.49 2.43
1996 2017 2.751806 GCATCACCCTTTCCTCTTCAAG 59.248 50.000 0.00 0.00 0.00 3.02
1997 2018 2.108075 TGCATCACCCTTTCCTCTTCAA 59.892 45.455 0.00 0.00 0.00 2.69
1998 2019 1.704628 TGCATCACCCTTTCCTCTTCA 59.295 47.619 0.00 0.00 0.00 3.02
1999 2020 2.363683 CTGCATCACCCTTTCCTCTTC 58.636 52.381 0.00 0.00 0.00 2.87
2000 2021 1.615384 GCTGCATCACCCTTTCCTCTT 60.615 52.381 0.00 0.00 0.00 2.85
2001 2022 0.034670 GCTGCATCACCCTTTCCTCT 60.035 55.000 0.00 0.00 0.00 3.69
2002 2023 0.322816 TGCTGCATCACCCTTTCCTC 60.323 55.000 0.00 0.00 0.00 3.71
2003 2024 0.112995 TTGCTGCATCACCCTTTCCT 59.887 50.000 1.84 0.00 0.00 3.36
2004 2025 0.968405 TTTGCTGCATCACCCTTTCC 59.032 50.000 1.84 0.00 0.00 3.13
2005 2026 1.615392 ACTTTGCTGCATCACCCTTTC 59.385 47.619 1.84 0.00 0.00 2.62
2006 2027 1.708341 ACTTTGCTGCATCACCCTTT 58.292 45.000 1.84 0.00 0.00 3.11
2007 2028 2.440409 CTACTTTGCTGCATCACCCTT 58.560 47.619 1.84 0.00 0.00 3.95
2008 2029 1.952367 GCTACTTTGCTGCATCACCCT 60.952 52.381 1.84 0.00 0.00 4.34
2009 2030 0.453390 GCTACTTTGCTGCATCACCC 59.547 55.000 1.84 0.00 0.00 4.61
2010 2031 0.097674 CGCTACTTTGCTGCATCACC 59.902 55.000 1.84 0.00 0.00 4.02
2011 2032 0.798776 ACGCTACTTTGCTGCATCAC 59.201 50.000 1.84 0.00 0.00 3.06
2012 2033 2.378445 TACGCTACTTTGCTGCATCA 57.622 45.000 1.84 0.00 0.00 3.07
2013 2034 2.673368 ACTTACGCTACTTTGCTGCATC 59.327 45.455 1.84 0.00 0.00 3.91
2014 2035 2.699954 ACTTACGCTACTTTGCTGCAT 58.300 42.857 1.84 0.00 0.00 3.96
2015 2036 2.163818 ACTTACGCTACTTTGCTGCA 57.836 45.000 0.00 0.00 0.00 4.41
2016 2037 4.859629 AATACTTACGCTACTTTGCTGC 57.140 40.909 0.00 0.00 0.00 5.25
2017 2038 5.220605 GGGAAATACTTACGCTACTTTGCTG 60.221 44.000 0.00 0.00 0.00 4.41
2018 2039 4.874396 GGGAAATACTTACGCTACTTTGCT 59.126 41.667 0.00 0.00 0.00 3.91
2019 2040 4.874396 AGGGAAATACTTACGCTACTTTGC 59.126 41.667 0.00 0.00 0.00 3.68
2020 2041 6.103997 TGAGGGAAATACTTACGCTACTTTG 58.896 40.000 0.00 0.00 0.00 2.77
2021 2042 6.070938 ACTGAGGGAAATACTTACGCTACTTT 60.071 38.462 0.00 0.00 0.00 2.66
2022 2043 5.421374 ACTGAGGGAAATACTTACGCTACTT 59.579 40.000 0.00 0.00 0.00 2.24
2023 2044 4.954826 ACTGAGGGAAATACTTACGCTACT 59.045 41.667 0.00 0.00 0.00 2.57
2024 2045 5.259832 ACTGAGGGAAATACTTACGCTAC 57.740 43.478 0.00 0.00 0.00 3.58
2025 2046 5.927281 AACTGAGGGAAATACTTACGCTA 57.073 39.130 0.00 0.00 0.00 4.26
2026 2047 4.820894 AACTGAGGGAAATACTTACGCT 57.179 40.909 0.00 0.00 0.00 5.07
2027 2048 5.874895 AAAACTGAGGGAAATACTTACGC 57.125 39.130 0.00 0.00 0.00 4.42
2028 2049 7.429636 TCAAAAACTGAGGGAAATACTTACG 57.570 36.000 0.00 0.00 0.00 3.18
2042 2063 6.361433 TGATACCTTGGTTCTCAAAAACTGA 58.639 36.000 0.00 0.00 34.56 3.41
2043 2064 6.633500 TGATACCTTGGTTCTCAAAAACTG 57.367 37.500 0.00 0.00 34.56 3.16
2044 2065 7.039714 GGATTGATACCTTGGTTCTCAAAAACT 60.040 37.037 16.13 5.53 34.56 2.66
2045 2066 7.090808 GGATTGATACCTTGGTTCTCAAAAAC 58.909 38.462 16.13 12.11 34.56 2.43
2046 2067 6.780031 TGGATTGATACCTTGGTTCTCAAAAA 59.220 34.615 16.13 7.12 34.56 1.94
2047 2068 6.310941 TGGATTGATACCTTGGTTCTCAAAA 58.689 36.000 16.13 7.35 34.56 2.44
2048 2069 5.886609 TGGATTGATACCTTGGTTCTCAAA 58.113 37.500 16.13 3.96 34.56 2.69
2049 2070 5.014123 ACTGGATTGATACCTTGGTTCTCAA 59.986 40.000 15.14 15.14 0.00 3.02
2050 2071 4.536090 ACTGGATTGATACCTTGGTTCTCA 59.464 41.667 0.00 0.00 0.00 3.27
2051 2072 5.104259 ACTGGATTGATACCTTGGTTCTC 57.896 43.478 0.00 0.00 0.00 2.87
2052 2073 5.131142 CCTACTGGATTGATACCTTGGTTCT 59.869 44.000 0.00 0.00 34.57 3.01
2053 2074 5.130477 TCCTACTGGATTGATACCTTGGTTC 59.870 44.000 0.00 0.00 37.46 3.62
2054 2075 5.036916 TCCTACTGGATTGATACCTTGGTT 58.963 41.667 0.00 0.00 37.46 3.67
2055 2076 4.631234 TCCTACTGGATTGATACCTTGGT 58.369 43.478 0.00 0.00 37.46 3.67
2056 2077 4.040952 CCTCCTACTGGATTGATACCTTGG 59.959 50.000 0.00 0.00 42.29 3.61
2057 2078 4.656112 ACCTCCTACTGGATTGATACCTTG 59.344 45.833 0.00 0.00 42.29 3.61
2058 2079 4.897051 ACCTCCTACTGGATTGATACCTT 58.103 43.478 0.00 0.00 42.29 3.50
2059 2080 4.561254 ACCTCCTACTGGATTGATACCT 57.439 45.455 0.00 0.00 42.29 3.08
2060 2081 5.601313 TGTAACCTCCTACTGGATTGATACC 59.399 44.000 0.00 0.00 42.29 2.73
2061 2082 6.514063 GTGTAACCTCCTACTGGATTGATAC 58.486 44.000 0.00 0.00 42.29 2.24
2062 2083 5.301045 CGTGTAACCTCCTACTGGATTGATA 59.699 44.000 0.00 0.00 42.29 2.15
2063 2084 4.099573 CGTGTAACCTCCTACTGGATTGAT 59.900 45.833 0.00 0.00 42.29 2.57
2064 2085 3.446161 CGTGTAACCTCCTACTGGATTGA 59.554 47.826 0.00 0.00 42.29 2.57
2065 2086 3.782046 CGTGTAACCTCCTACTGGATTG 58.218 50.000 0.00 0.00 42.29 2.67
2066 2087 2.167900 GCGTGTAACCTCCTACTGGATT 59.832 50.000 0.00 0.00 42.29 3.01
2067 2088 1.755380 GCGTGTAACCTCCTACTGGAT 59.245 52.381 0.00 0.00 42.29 3.41
2068 2089 1.180029 GCGTGTAACCTCCTACTGGA 58.820 55.000 0.00 0.00 40.69 3.86
2069 2090 0.892755 TGCGTGTAACCTCCTACTGG 59.107 55.000 0.00 0.00 0.00 4.00
2070 2091 2.029290 ACTTGCGTGTAACCTCCTACTG 60.029 50.000 0.00 0.00 0.00 2.74
2071 2092 2.230750 GACTTGCGTGTAACCTCCTACT 59.769 50.000 0.00 0.00 0.00 2.57
2072 2093 2.603953 GACTTGCGTGTAACCTCCTAC 58.396 52.381 0.00 0.00 0.00 3.18
2073 2094 1.200716 CGACTTGCGTGTAACCTCCTA 59.799 52.381 0.00 0.00 34.64 2.94
2074 2095 0.038526 CGACTTGCGTGTAACCTCCT 60.039 55.000 0.00 0.00 34.64 3.69
2075 2096 1.623973 GCGACTTGCGTGTAACCTCC 61.624 60.000 0.00 0.00 43.41 4.30
2076 2097 1.779683 GCGACTTGCGTGTAACCTC 59.220 57.895 0.00 0.00 43.41 3.85
2077 2098 3.946907 GCGACTTGCGTGTAACCT 58.053 55.556 0.00 0.00 43.41 3.50
2090 2111 0.882927 TTGTGCAGGTACAAGGCGAC 60.883 55.000 0.00 0.00 35.75 5.19
2091 2112 0.179043 TTTGTGCAGGTACAAGGCGA 60.179 50.000 3.30 0.00 41.18 5.54
2092 2113 0.040425 GTTTGTGCAGGTACAAGGCG 60.040 55.000 3.30 0.00 41.18 5.52
2093 2114 1.028905 TGTTTGTGCAGGTACAAGGC 58.971 50.000 3.30 0.00 41.18 4.35
2094 2115 3.791973 TTTGTTTGTGCAGGTACAAGG 57.208 42.857 3.30 0.00 41.18 3.61
2095 2116 6.734137 TCTTATTTGTTTGTGCAGGTACAAG 58.266 36.000 3.30 0.00 41.18 3.16
2096 2117 6.701145 TCTTATTTGTTTGTGCAGGTACAA 57.299 33.333 0.00 0.00 38.69 2.41
2097 2118 6.460399 GGTTCTTATTTGTTTGTGCAGGTACA 60.460 38.462 0.00 0.00 0.00 2.90
2098 2119 5.918576 GGTTCTTATTTGTTTGTGCAGGTAC 59.081 40.000 0.00 0.00 0.00 3.34
2099 2120 5.830991 AGGTTCTTATTTGTTTGTGCAGGTA 59.169 36.000 0.00 0.00 0.00 3.08
2100 2121 4.649218 AGGTTCTTATTTGTTTGTGCAGGT 59.351 37.500 0.00 0.00 0.00 4.00
2101 2122 5.200368 AGGTTCTTATTTGTTTGTGCAGG 57.800 39.130 0.00 0.00 0.00 4.85
2102 2123 5.050837 GCAAGGTTCTTATTTGTTTGTGCAG 60.051 40.000 0.00 0.00 0.00 4.41
2103 2124 4.808364 GCAAGGTTCTTATTTGTTTGTGCA 59.192 37.500 0.00 0.00 0.00 4.57
2104 2125 4.808364 TGCAAGGTTCTTATTTGTTTGTGC 59.192 37.500 0.00 0.00 0.00 4.57
2105 2126 6.238076 GGTTGCAAGGTTCTTATTTGTTTGTG 60.238 38.462 0.00 0.00 0.00 3.33
2106 2127 5.815222 GGTTGCAAGGTTCTTATTTGTTTGT 59.185 36.000 0.00 0.00 0.00 2.83
2107 2128 5.814705 TGGTTGCAAGGTTCTTATTTGTTTG 59.185 36.000 0.00 0.00 0.00 2.93
2108 2129 5.983540 TGGTTGCAAGGTTCTTATTTGTTT 58.016 33.333 0.00 0.00 0.00 2.83
2109 2130 5.606348 TGGTTGCAAGGTTCTTATTTGTT 57.394 34.783 0.00 0.00 0.00 2.83
2110 2131 5.356426 GTTGGTTGCAAGGTTCTTATTTGT 58.644 37.500 0.00 0.00 0.00 2.83
2111 2132 4.444056 CGTTGGTTGCAAGGTTCTTATTTG 59.556 41.667 0.00 0.00 0.00 2.32
2112 2133 4.616953 CGTTGGTTGCAAGGTTCTTATTT 58.383 39.130 0.00 0.00 0.00 1.40
2113 2134 3.552068 GCGTTGGTTGCAAGGTTCTTATT 60.552 43.478 0.00 0.00 0.00 1.40
2114 2135 2.030274 GCGTTGGTTGCAAGGTTCTTAT 60.030 45.455 0.00 0.00 0.00 1.73
2115 2136 1.335496 GCGTTGGTTGCAAGGTTCTTA 59.665 47.619 0.00 0.00 0.00 2.10
2116 2137 0.102300 GCGTTGGTTGCAAGGTTCTT 59.898 50.000 0.00 0.00 0.00 2.52
2117 2138 1.733526 GCGTTGGTTGCAAGGTTCT 59.266 52.632 0.00 0.00 0.00 3.01
2118 2139 1.657181 CGCGTTGGTTGCAAGGTTC 60.657 57.895 0.00 0.00 0.00 3.62
2119 2140 1.452145 ATCGCGTTGGTTGCAAGGTT 61.452 50.000 5.77 0.00 0.00 3.50
2120 2141 0.604243 TATCGCGTTGGTTGCAAGGT 60.604 50.000 5.77 0.00 0.00 3.50
2121 2142 0.519519 TTATCGCGTTGGTTGCAAGG 59.480 50.000 5.77 0.00 0.00 3.61
2122 2143 2.241722 CTTTATCGCGTTGGTTGCAAG 58.758 47.619 5.77 0.00 0.00 4.01
2123 2144 1.068885 CCTTTATCGCGTTGGTTGCAA 60.069 47.619 5.77 0.00 0.00 4.08
2124 2145 0.519519 CCTTTATCGCGTTGGTTGCA 59.480 50.000 5.77 0.00 0.00 4.08
2125 2146 0.179174 CCCTTTATCGCGTTGGTTGC 60.179 55.000 5.77 0.00 0.00 4.17
2126 2147 0.450184 CCCCTTTATCGCGTTGGTTG 59.550 55.000 5.77 0.00 0.00 3.77
2127 2148 0.037160 ACCCCTTTATCGCGTTGGTT 59.963 50.000 5.77 0.00 0.00 3.67
2128 2149 0.037160 AACCCCTTTATCGCGTTGGT 59.963 50.000 5.77 0.00 0.00 3.67
2129 2150 0.450184 CAACCCCTTTATCGCGTTGG 59.550 55.000 5.77 2.32 32.14 3.77
2130 2151 1.129811 GACAACCCCTTTATCGCGTTG 59.870 52.381 5.77 2.01 39.70 4.10
2131 2152 1.270947 TGACAACCCCTTTATCGCGTT 60.271 47.619 5.77 0.00 0.00 4.84
2132 2153 0.322322 TGACAACCCCTTTATCGCGT 59.678 50.000 5.77 0.00 0.00 6.01
2133 2154 1.444836 TTGACAACCCCTTTATCGCG 58.555 50.000 0.00 0.00 0.00 5.87
2134 2155 2.357952 GGATTGACAACCCCTTTATCGC 59.642 50.000 0.00 0.00 0.00 4.58
2135 2156 2.949644 GGGATTGACAACCCCTTTATCG 59.050 50.000 10.82 0.00 40.19 2.92
2142 2163 1.545841 GTGAAGGGATTGACAACCCC 58.454 55.000 10.02 10.02 46.64 4.95
2143 2164 1.165270 CGTGAAGGGATTGACAACCC 58.835 55.000 14.59 14.59 45.88 4.11
2144 2165 1.804748 GTCGTGAAGGGATTGACAACC 59.195 52.381 0.00 0.00 0.00 3.77
2145 2166 1.804748 GGTCGTGAAGGGATTGACAAC 59.195 52.381 0.00 0.00 0.00 3.32
2146 2167 1.418264 TGGTCGTGAAGGGATTGACAA 59.582 47.619 0.00 0.00 0.00 3.18
2147 2168 1.052617 TGGTCGTGAAGGGATTGACA 58.947 50.000 0.00 0.00 0.00 3.58
2148 2169 1.002087 AGTGGTCGTGAAGGGATTGAC 59.998 52.381 0.00 0.00 0.00 3.18
2149 2170 1.348064 AGTGGTCGTGAAGGGATTGA 58.652 50.000 0.00 0.00 0.00 2.57
2150 2171 1.806542 CAAGTGGTCGTGAAGGGATTG 59.193 52.381 0.00 0.00 0.00 2.67
2151 2172 1.882352 GCAAGTGGTCGTGAAGGGATT 60.882 52.381 0.00 0.00 0.00 3.01
2152 2173 0.321653 GCAAGTGGTCGTGAAGGGAT 60.322 55.000 0.00 0.00 0.00 3.85
2153 2174 1.070786 GCAAGTGGTCGTGAAGGGA 59.929 57.895 0.00 0.00 0.00 4.20
2154 2175 0.817634 TTGCAAGTGGTCGTGAAGGG 60.818 55.000 0.00 0.00 0.00 3.95
2155 2176 1.021202 TTTGCAAGTGGTCGTGAAGG 58.979 50.000 0.00 0.00 0.00 3.46
2156 2177 2.097466 AGTTTTGCAAGTGGTCGTGAAG 59.903 45.455 0.00 0.00 0.00 3.02
2157 2178 2.088423 AGTTTTGCAAGTGGTCGTGAA 58.912 42.857 0.00 0.00 0.00 3.18
2158 2179 1.400142 CAGTTTTGCAAGTGGTCGTGA 59.600 47.619 0.00 0.00 30.50 4.35
2159 2180 1.400142 TCAGTTTTGCAAGTGGTCGTG 59.600 47.619 0.00 0.00 34.45 4.35
2160 2181 1.670811 CTCAGTTTTGCAAGTGGTCGT 59.329 47.619 0.00 0.00 34.45 4.34
2161 2182 1.939934 TCTCAGTTTTGCAAGTGGTCG 59.060 47.619 0.00 0.00 34.45 4.79
2162 2183 3.817647 AGATCTCAGTTTTGCAAGTGGTC 59.182 43.478 0.00 0.00 34.45 4.02
2163 2184 3.567164 CAGATCTCAGTTTTGCAAGTGGT 59.433 43.478 0.00 0.00 34.45 4.16
2164 2185 3.817084 TCAGATCTCAGTTTTGCAAGTGG 59.183 43.478 0.00 0.00 34.45 4.00
2165 2186 5.624344 ATCAGATCTCAGTTTTGCAAGTG 57.376 39.130 0.00 0.00 34.94 3.16
2166 2187 6.705302 TCTATCAGATCTCAGTTTTGCAAGT 58.295 36.000 0.00 0.00 0.00 3.16
2167 2188 7.040494 TCTCTATCAGATCTCAGTTTTGCAAG 58.960 38.462 0.00 0.00 0.00 4.01
2168 2189 6.939622 TCTCTATCAGATCTCAGTTTTGCAA 58.060 36.000 0.00 0.00 0.00 4.08
2169 2190 6.535963 TCTCTATCAGATCTCAGTTTTGCA 57.464 37.500 0.00 0.00 0.00 4.08
2170 2191 9.709495 ATTATCTCTATCAGATCTCAGTTTTGC 57.291 33.333 0.00 0.00 41.39 3.68
2254 2275 8.840321 CCATCATACAAGTTTCCGATCTATTTT 58.160 33.333 0.00 0.00 0.00 1.82
2255 2276 8.210946 TCCATCATACAAGTTTCCGATCTATTT 58.789 33.333 0.00 0.00 0.00 1.40
2256 2277 7.735917 TCCATCATACAAGTTTCCGATCTATT 58.264 34.615 0.00 0.00 0.00 1.73
2257 2278 7.303182 TCCATCATACAAGTTTCCGATCTAT 57.697 36.000 0.00 0.00 0.00 1.98
2258 2279 6.724893 TCCATCATACAAGTTTCCGATCTA 57.275 37.500 0.00 0.00 0.00 1.98
2259 2280 5.614324 TCCATCATACAAGTTTCCGATCT 57.386 39.130 0.00 0.00 0.00 2.75
2260 2281 6.677781 TTTCCATCATACAAGTTTCCGATC 57.322 37.500 0.00 0.00 0.00 3.69
2261 2282 7.645058 ATTTTCCATCATACAAGTTTCCGAT 57.355 32.000 0.00 0.00 0.00 4.18
2262 2283 7.461182 AATTTTCCATCATACAAGTTTCCGA 57.539 32.000 0.00 0.00 0.00 4.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.