Multiple sequence alignment - TraesCS7D01G158100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G158100 chr7D 100.000 6701 0 0 1 6701 105681730 105688430 0.000000e+00 12375.0
1 TraesCS7D01G158100 chr7D 98.225 169 2 1 1884 2051 381000397 381000229 1.830000e-75 294.0
2 TraesCS7D01G158100 chr7B 96.231 1592 53 1 4422 6006 64321574 64323165 0.000000e+00 2601.0
3 TraesCS7D01G158100 chr7B 92.344 1698 71 22 199 1879 64317349 64319004 0.000000e+00 2361.0
4 TraesCS7D01G158100 chr7B 93.023 774 50 4 3156 3926 64320364 64321136 0.000000e+00 1127.0
5 TraesCS7D01G158100 chr7B 96.491 570 17 3 2539 3107 64319419 64319986 0.000000e+00 939.0
6 TraesCS7D01G158100 chr7B 92.840 419 23 6 2046 2459 64319004 64319420 9.620000e-168 601.0
7 TraesCS7D01G158100 chr7B 95.960 198 8 0 3925 4122 64321380 64321577 8.380000e-84 322.0
8 TraesCS7D01G158100 chr3B 90.996 1577 133 6 4424 5994 29853919 29855492 0.000000e+00 2117.0
9 TraesCS7D01G158100 chr3B 90.593 1584 139 4 4432 6006 30517304 30518886 0.000000e+00 2091.0
10 TraesCS7D01G158100 chr3B 90.183 1589 145 7 4424 6003 29781904 29783490 0.000000e+00 2060.0
11 TraesCS7D01G158100 chr3B 89.686 1590 149 10 4424 6003 30207292 30208876 0.000000e+00 2013.0
12 TraesCS7D01G158100 chr3B 87.445 1593 154 17 4424 6006 29734461 29736017 0.000000e+00 1792.0
13 TraesCS7D01G158100 chr3B 87.250 1349 110 25 2077 3417 30236240 30237534 0.000000e+00 1482.0
14 TraesCS7D01G158100 chr3B 80.660 1939 262 67 2047 3926 30501867 30503751 0.000000e+00 1399.0
15 TraesCS7D01G158100 chr3B 85.358 1284 136 35 2639 3904 30531486 30532735 0.000000e+00 1282.0
16 TraesCS7D01G158100 chr3B 87.905 926 96 4 967 1879 30529086 30530008 0.000000e+00 1075.0
17 TraesCS7D01G158100 chr3B 88.257 826 90 6 2637 3457 30514885 30515708 0.000000e+00 981.0
18 TraesCS7D01G158100 chr3B 84.187 683 91 11 2806 3476 30472822 30473499 0.000000e+00 647.0
19 TraesCS7D01G158100 chr3B 82.447 752 86 23 3205 3926 29527672 29526937 3.430000e-172 616.0
20 TraesCS7D01G158100 chr3B 89.113 496 45 8 2064 2553 30530182 30530674 5.750000e-170 608.0
21 TraesCS7D01G158100 chr3B 82.542 653 83 13 2490 3122 29779914 29780555 4.570000e-151 545.0
22 TraesCS7D01G158100 chr3B 81.818 649 94 12 2490 3122 30204760 30205400 2.140000e-144 523.0
23 TraesCS7D01G158100 chr3B 89.634 328 26 4 2139 2460 30514299 30514624 1.740000e-110 411.0
24 TraesCS7D01G158100 chr3B 78.419 658 89 23 2156 2806 30472158 30472769 4.900000e-101 379.0
25 TraesCS7D01G158100 chr3B 87.859 313 38 0 4115 4427 947061 947373 1.060000e-97 368.0
26 TraesCS7D01G158100 chr3B 87.859 313 38 0 4115 4427 949005 949317 1.060000e-97 368.0
27 TraesCS7D01G158100 chr3B 75.620 685 133 22 1118 1785 29418855 29418188 6.530000e-80 309.0
28 TraesCS7D01G158100 chr3B 84.049 326 41 7 3601 3926 29564398 29564084 3.040000e-78 303.0
29 TraesCS7D01G158100 chr3B 79.610 461 62 16 3458 3904 30243172 30243614 1.090000e-77 302.0
30 TraesCS7D01G158100 chr3B 93.970 199 11 1 3925 4122 29526708 29526510 3.930000e-77 300.0
31 TraesCS7D01G158100 chr3B 83.792 327 40 8 3601 3926 30068016 30067702 1.410000e-76 298.0
32 TraesCS7D01G158100 chr3B 90.811 185 14 2 3938 4122 29563907 29563726 1.870000e-60 244.0
33 TraesCS7D01G158100 chr3B 90.000 180 15 1 3938 4117 30067524 30067348 5.230000e-56 230.0
34 TraesCS7D01G158100 chr3B 86.802 197 12 8 222 404 29483717 29483521 2.450000e-49 207.0
35 TraesCS7D01G158100 chr3B 94.488 127 7 0 2513 2639 30514636 30514762 5.300000e-46 196.0
36 TraesCS7D01G158100 chr3B 88.983 118 8 4 3925 4037 30376589 30376706 2.520000e-29 141.0
37 TraesCS7D01G158100 chr3B 88.571 105 12 0 1118 1222 75476737 75476633 1.960000e-25 128.0
38 TraesCS7D01G158100 chr3B 77.828 221 34 11 1170 1381 30235146 30235360 9.130000e-24 122.0
39 TraesCS7D01G158100 chr3B 87.692 65 6 2 4045 4108 29864248 29864311 2.590000e-09 75.0
40 TraesCS7D01G158100 chr3B 87.692 65 6 2 4045 4108 30255206 30255269 2.590000e-09 75.0
41 TraesCS7D01G158100 chr3D 90.428 1588 125 18 4424 6003 18801259 18802827 0.000000e+00 2065.0
42 TraesCS7D01G158100 chr3D 90.824 1493 113 8 4424 5909 18908628 18910103 0.000000e+00 1977.0
43 TraesCS7D01G158100 chr3D 91.643 694 56 2 6009 6701 566597246 566596554 0.000000e+00 959.0
44 TraesCS7D01G158100 chr3D 80.620 774 124 13 1013 1785 17348698 17349446 5.830000e-160 575.0
45 TraesCS7D01G158100 chr3D 88.818 313 34 1 4114 4426 420987547 420987236 3.790000e-102 383.0
46 TraesCS7D01G158100 chr3D 89.035 228 25 0 5776 6003 18953898 18954125 3.960000e-72 283.0
47 TraesCS7D01G158100 chr3D 95.954 173 6 1 57 229 42740050 42739879 5.120000e-71 279.0
48 TraesCS7D01G158100 chr3D 89.831 118 11 1 3925 4041 18800901 18801018 4.190000e-32 150.0
49 TraesCS7D01G158100 chr3D 88.172 93 10 1 3949 4041 19013746 19013837 7.100000e-20 110.0
50 TraesCS7D01G158100 chr3D 90.000 60 5 1 4050 4108 19014003 19014062 7.210000e-10 76.8
51 TraesCS7D01G158100 chr3A 90.635 1495 129 6 4424 5909 26261508 26263000 0.000000e+00 1975.0
52 TraesCS7D01G158100 chr3A 89.426 1532 145 11 4454 5973 26481456 26482982 0.000000e+00 1916.0
53 TraesCS7D01G158100 chr3A 85.435 1792 181 50 2151 3902 26479182 26480933 0.000000e+00 1790.0
54 TraesCS7D01G158100 chr3A 87.580 934 87 18 2198 3122 26404107 26405020 0.000000e+00 1055.0
55 TraesCS7D01G158100 chr3A 90.420 762 65 4 3167 3926 26405018 26405773 0.000000e+00 996.0
56 TraesCS7D01G158100 chr3A 79.037 644 108 12 1110 1751 26260078 26260696 3.740000e-112 416.0
57 TraesCS7D01G158100 chr3A 86.984 315 39 2 4111 4425 644530220 644530532 2.970000e-93 353.0
58 TraesCS7D01G158100 chr3A 94.359 195 10 1 3925 4119 26406020 26406213 1.410000e-76 298.0
59 TraesCS7D01G158100 chr3A 96.970 165 5 0 57 221 41183277 41183441 1.840000e-70 278.0
60 TraesCS7D01G158100 chr3A 82.639 144 16 1 953 1087 26259939 26260082 1.180000e-22 119.0
61 TraesCS7D01G158100 chr3A 88.333 60 6 1 4050 4108 26489369 26489428 3.350000e-08 71.3
62 TraesCS7D01G158100 chr1A 89.857 700 66 4 6006 6701 469594279 469594977 0.000000e+00 894.0
63 TraesCS7D01G158100 chr6D 89.828 698 68 3 6006 6701 174394397 174395093 0.000000e+00 893.0
64 TraesCS7D01G158100 chr6A 89.828 698 65 6 6006 6701 198070649 198069956 0.000000e+00 891.0
65 TraesCS7D01G158100 chr6A 87.948 307 34 3 4121 4425 351703531 351703226 6.390000e-95 359.0
66 TraesCS7D01G158100 chr6A 94.767 172 8 1 1884 2054 115317413 115317242 3.980000e-67 267.0
67 TraesCS7D01G158100 chr6A 92.737 179 12 1 1883 2061 82591064 82591241 2.400000e-64 257.0
68 TraesCS7D01G158100 chr6B 89.542 698 71 2 6006 6701 39909641 39910338 0.000000e+00 883.0
69 TraesCS7D01G158100 chr4A 89.811 687 67 3 6017 6701 641246152 641246837 0.000000e+00 878.0
70 TraesCS7D01G158100 chr4A 92.513 187 11 2 1884 2067 554787871 554788057 1.430000e-66 265.0
71 TraesCS7D01G158100 chr2B 89.353 695 72 2 6009 6701 794912092 794911398 0.000000e+00 872.0
72 TraesCS7D01G158100 chr1D 89.383 697 65 6 6006 6701 464622236 464622924 0.000000e+00 869.0
73 TraesCS7D01G158100 chr1D 87.702 309 36 2 4117 4425 111848215 111848521 6.390000e-95 359.0
74 TraesCS7D01G158100 chr1D 97.740 177 3 1 1881 2057 47322101 47322276 3.040000e-78 303.0
75 TraesCS7D01G158100 chr1D 94.220 173 10 0 1880 2052 9218376 9218204 1.430000e-66 265.0
76 TraesCS7D01G158100 chr1D 92.857 182 11 2 1883 2063 132303678 132303498 5.150000e-66 263.0
77 TraesCS7D01G158100 chr4B 88.953 697 75 2 6006 6701 17851567 17852262 0.000000e+00 859.0
78 TraesCS7D01G158100 chr4B 89.180 305 33 0 4121 4425 549200364 549200060 1.360000e-101 381.0
79 TraesCS7D01G158100 chr4B 94.253 174 8 2 1880 2052 618189970 618189798 1.430000e-66 265.0
80 TraesCS7D01G158100 chr5B 88.274 307 33 3 4121 4426 11532976 11532672 1.370000e-96 364.0
81 TraesCS7D01G158100 chr5A 87.869 305 37 0 4121 4425 510387327 510387631 6.390000e-95 359.0
82 TraesCS7D01G158100 chr5A 96.407 167 6 0 56 222 126692563 126692729 6.620000e-70 276.0
83 TraesCS7D01G158100 chr5A 95.882 170 7 0 54 223 676319131 676319300 6.620000e-70 276.0
84 TraesCS7D01G158100 chr4D 97.024 168 5 0 53 220 281177084 281177251 3.960000e-72 283.0
85 TraesCS7D01G158100 chr4D 95.858 169 7 0 53 221 407792325 407792157 2.380000e-69 274.0
86 TraesCS7D01G158100 chr2D 96.988 166 5 0 56 221 330215228 330215063 5.120000e-71 279.0
87 TraesCS7D01G158100 chr2D 94.828 174 8 1 47 220 5377821 5377993 3.080000e-68 270.0
88 TraesCS7D01G158100 chrUn 94.857 175 8 1 53 227 61009611 61009438 8.560000e-69 272.0
89 TraesCS7D01G158100 chr5D 95.294 170 8 0 1882 2051 42949726 42949557 3.080000e-68 270.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G158100 chr7D 105681730 105688430 6700 False 12375.000000 12375 100.000000 1 6701 1 chr7D.!!$F1 6700
1 TraesCS7D01G158100 chr7B 64317349 64323165 5816 False 1325.166667 2601 94.481500 199 6006 6 chr7B.!!$F1 5807
2 TraesCS7D01G158100 chr3B 29853919 29855492 1573 False 2117.000000 2117 90.996000 4424 5994 1 chr3B.!!$F2 1570
3 TraesCS7D01G158100 chr3B 29734461 29736017 1556 False 1792.000000 1792 87.445000 4424 6006 1 chr3B.!!$F1 1582
4 TraesCS7D01G158100 chr3B 30501867 30503751 1884 False 1399.000000 1399 80.660000 2047 3926 1 chr3B.!!$F7 1879
5 TraesCS7D01G158100 chr3B 29779914 29783490 3576 False 1302.500000 2060 86.362500 2490 6003 2 chr3B.!!$F9 3513
6 TraesCS7D01G158100 chr3B 30204760 30208876 4116 False 1268.000000 2013 85.752000 2490 6003 2 chr3B.!!$F10 3513
7 TraesCS7D01G158100 chr3B 30529086 30532735 3649 False 988.333333 1282 87.458667 967 3904 3 chr3B.!!$F14 2937
8 TraesCS7D01G158100 chr3B 30514299 30518886 4587 False 919.750000 2091 90.743000 2139 6006 4 chr3B.!!$F13 3867
9 TraesCS7D01G158100 chr3B 30235146 30237534 2388 False 802.000000 1482 82.539000 1170 3417 2 chr3B.!!$F11 2247
10 TraesCS7D01G158100 chr3B 30472158 30473499 1341 False 513.000000 647 81.303000 2156 3476 2 chr3B.!!$F12 1320
11 TraesCS7D01G158100 chr3B 29526510 29527672 1162 True 458.000000 616 88.208500 3205 4122 2 chr3B.!!$R4 917
12 TraesCS7D01G158100 chr3B 947061 949317 2256 False 368.000000 368 87.859000 4115 4427 2 chr3B.!!$F8 312
13 TraesCS7D01G158100 chr3B 29418188 29418855 667 True 309.000000 309 75.620000 1118 1785 1 chr3B.!!$R1 667
14 TraesCS7D01G158100 chr3B 29563726 29564398 672 True 273.500000 303 87.430000 3601 4122 2 chr3B.!!$R5 521
15 TraesCS7D01G158100 chr3B 30067348 30068016 668 True 264.000000 298 86.896000 3601 4117 2 chr3B.!!$R6 516
16 TraesCS7D01G158100 chr3D 18908628 18910103 1475 False 1977.000000 1977 90.824000 4424 5909 1 chr3D.!!$F2 1485
17 TraesCS7D01G158100 chr3D 18800901 18802827 1926 False 1107.500000 2065 90.129500 3925 6003 2 chr3D.!!$F4 2078
18 TraesCS7D01G158100 chr3D 566596554 566597246 692 True 959.000000 959 91.643000 6009 6701 1 chr3D.!!$R3 692
19 TraesCS7D01G158100 chr3D 17348698 17349446 748 False 575.000000 575 80.620000 1013 1785 1 chr3D.!!$F1 772
20 TraesCS7D01G158100 chr3A 26479182 26482982 3800 False 1853.000000 1916 87.430500 2151 5973 2 chr3A.!!$F6 3822
21 TraesCS7D01G158100 chr3A 26259939 26263000 3061 False 836.666667 1975 84.103667 953 5909 3 chr3A.!!$F4 4956
22 TraesCS7D01G158100 chr3A 26404107 26406213 2106 False 783.000000 1055 90.786333 2198 4119 3 chr3A.!!$F5 1921
23 TraesCS7D01G158100 chr1A 469594279 469594977 698 False 894.000000 894 89.857000 6006 6701 1 chr1A.!!$F1 695
24 TraesCS7D01G158100 chr6D 174394397 174395093 696 False 893.000000 893 89.828000 6006 6701 1 chr6D.!!$F1 695
25 TraesCS7D01G158100 chr6A 198069956 198070649 693 True 891.000000 891 89.828000 6006 6701 1 chr6A.!!$R2 695
26 TraesCS7D01G158100 chr6B 39909641 39910338 697 False 883.000000 883 89.542000 6006 6701 1 chr6B.!!$F1 695
27 TraesCS7D01G158100 chr4A 641246152 641246837 685 False 878.000000 878 89.811000 6017 6701 1 chr4A.!!$F2 684
28 TraesCS7D01G158100 chr2B 794911398 794912092 694 True 872.000000 872 89.353000 6009 6701 1 chr2B.!!$R1 692
29 TraesCS7D01G158100 chr1D 464622236 464622924 688 False 869.000000 869 89.383000 6006 6701 1 chr1D.!!$F3 695
30 TraesCS7D01G158100 chr4B 17851567 17852262 695 False 859.000000 859 88.953000 6006 6701 1 chr4B.!!$F1 695

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
227 228 0.320697 ACGGAGGGAGTAGTTTGCAC 59.679 55.000 0.00 0.0 0.00 4.57 F
357 358 0.388134 AGTGATGTTTCGTCGTCCGG 60.388 55.000 0.00 0.0 37.11 5.14 F
872 880 0.464036 TCTCACGTGTGTGCCTTCTT 59.536 50.000 16.51 0.0 46.01 2.52 F
1899 2304 0.042131 ATGTACTCCCTCCGTTCCCA 59.958 55.000 0.00 0.0 0.00 4.37 F
1900 2305 0.178926 TGTACTCCCTCCGTTCCCAA 60.179 55.000 0.00 0.0 0.00 4.12 F
1901 2306 0.978907 GTACTCCCTCCGTTCCCAAA 59.021 55.000 0.00 0.0 0.00 3.28 F
1902 2307 1.558294 GTACTCCCTCCGTTCCCAAAT 59.442 52.381 0.00 0.0 0.00 2.32 F
3759 7851 1.002142 GTAAACCCAACAGAACGCACC 60.002 52.381 0.00 0.0 0.00 5.01 F
3820 7914 2.198827 TTAGCCACACTGGTTCATGG 57.801 50.000 0.00 0.0 40.46 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1880 2285 0.042131 TGGGAACGGAGGGAGTACAT 59.958 55.000 0.00 0.0 0.00 2.29 R
1881 2286 0.178926 TTGGGAACGGAGGGAGTACA 60.179 55.000 0.00 0.0 0.00 2.90 R
2729 5725 0.840288 AGGTATGGTGGCCACACTCA 60.840 55.000 35.78 24.9 46.85 3.41 R
3389 6738 0.385849 ACGCGCATGTTGTGTTCATG 60.386 50.000 5.73 0.0 43.58 3.07 R
3485 6849 0.658897 GACCTCGCAAAAACGACCAA 59.341 50.000 0.00 0.0 37.09 3.67 R
3759 7851 1.405821 CTACAGAACTAGACCAGCGGG 59.594 57.143 0.00 0.0 41.29 6.13 R
3851 8040 4.441079 GCAGGAAAATGCATGCTCTGTTAT 60.441 41.667 20.33 0.0 45.77 1.89 R
5124 11740 2.816087 GTCATTGAAAGCTTGCTCTCCA 59.184 45.455 5.89 0.0 0.00 3.86 R
5777 12405 0.977395 GTACAGGCCACCTTCTCACT 59.023 55.000 5.01 0.0 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.725110 CTCATATAGTTGCACGCTCTTTT 57.275 39.130 0.00 0.00 0.00 2.27
44 45 4.464069 TTTTGTGTGTGGAAGAAAAGGG 57.536 40.909 0.00 0.00 0.00 3.95
45 46 3.374042 TTGTGTGTGGAAGAAAAGGGA 57.626 42.857 0.00 0.00 0.00 4.20
46 47 3.593442 TGTGTGTGGAAGAAAAGGGAT 57.407 42.857 0.00 0.00 0.00 3.85
47 48 3.486383 TGTGTGTGGAAGAAAAGGGATC 58.514 45.455 0.00 0.00 0.00 3.36
48 49 3.138283 TGTGTGTGGAAGAAAAGGGATCT 59.862 43.478 0.00 0.00 0.00 2.75
49 50 4.145052 GTGTGTGGAAGAAAAGGGATCTT 58.855 43.478 0.00 0.00 39.76 2.40
64 65 4.882842 GGATCTTCCCATCTACTTCCTC 57.117 50.000 0.00 0.00 0.00 3.71
65 66 3.580895 GGATCTTCCCATCTACTTCCTCC 59.419 52.174 0.00 0.00 0.00 4.30
66 67 2.667470 TCTTCCCATCTACTTCCTCCG 58.333 52.381 0.00 0.00 0.00 4.63
67 68 2.024273 TCTTCCCATCTACTTCCTCCGT 60.024 50.000 0.00 0.00 0.00 4.69
68 69 2.544844 TCCCATCTACTTCCTCCGTT 57.455 50.000 0.00 0.00 0.00 4.44
69 70 2.385803 TCCCATCTACTTCCTCCGTTC 58.614 52.381 0.00 0.00 0.00 3.95
70 71 1.413077 CCCATCTACTTCCTCCGTTCC 59.587 57.143 0.00 0.00 0.00 3.62
71 72 2.389715 CCATCTACTTCCTCCGTTCCT 58.610 52.381 0.00 0.00 0.00 3.36
72 73 3.563223 CCATCTACTTCCTCCGTTCCTA 58.437 50.000 0.00 0.00 0.00 2.94
73 74 3.958798 CCATCTACTTCCTCCGTTCCTAA 59.041 47.826 0.00 0.00 0.00 2.69
74 75 4.404715 CCATCTACTTCCTCCGTTCCTAAA 59.595 45.833 0.00 0.00 0.00 1.85
75 76 5.070580 CCATCTACTTCCTCCGTTCCTAAAT 59.929 44.000 0.00 0.00 0.00 1.40
76 77 6.267014 CCATCTACTTCCTCCGTTCCTAAATA 59.733 42.308 0.00 0.00 0.00 1.40
77 78 7.038941 CCATCTACTTCCTCCGTTCCTAAATAT 60.039 40.741 0.00 0.00 0.00 1.28
78 79 7.909485 TCTACTTCCTCCGTTCCTAAATATT 57.091 36.000 0.00 0.00 0.00 1.28
79 80 8.315220 TCTACTTCCTCCGTTCCTAAATATTT 57.685 34.615 5.89 5.89 0.00 1.40
80 81 8.202137 TCTACTTCCTCCGTTCCTAAATATTTG 58.798 37.037 11.05 1.40 0.00 2.32
81 82 6.718294 ACTTCCTCCGTTCCTAAATATTTGT 58.282 36.000 11.05 0.00 0.00 2.83
82 83 6.822170 ACTTCCTCCGTTCCTAAATATTTGTC 59.178 38.462 11.05 0.00 0.00 3.18
83 84 6.555463 TCCTCCGTTCCTAAATATTTGTCT 57.445 37.500 11.05 0.00 0.00 3.41
84 85 6.954232 TCCTCCGTTCCTAAATATTTGTCTT 58.046 36.000 11.05 0.00 0.00 3.01
85 86 7.399634 TCCTCCGTTCCTAAATATTTGTCTTT 58.600 34.615 11.05 0.00 0.00 2.52
86 87 7.551617 TCCTCCGTTCCTAAATATTTGTCTTTC 59.448 37.037 11.05 0.00 0.00 2.62
87 88 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
88 89 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
89 90 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
90 91 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
110 111 9.958180 TTCTAGAGATTTTAAATGGTCATCACA 57.042 29.630 0.00 0.00 0.00 3.58
114 115 8.830580 AGAGATTTTAAATGGTCATCACATACG 58.169 33.333 0.00 0.00 0.00 3.06
115 116 7.930217 AGATTTTAAATGGTCATCACATACGG 58.070 34.615 0.00 0.00 0.00 4.02
116 117 7.773224 AGATTTTAAATGGTCATCACATACGGA 59.227 33.333 0.00 0.00 0.00 4.69
117 118 7.873719 TTTTAAATGGTCATCACATACGGAT 57.126 32.000 0.00 0.00 0.00 4.18
118 119 6.859420 TTAAATGGTCATCACATACGGATG 57.141 37.500 5.94 5.94 42.73 3.51
120 121 5.545063 AATGGTCATCACATACGGATGTA 57.455 39.130 14.23 2.61 44.82 2.29
121 122 5.745312 ATGGTCATCACATACGGATGTAT 57.255 39.130 14.23 5.00 44.82 2.29
122 123 6.850752 ATGGTCATCACATACGGATGTATA 57.149 37.500 14.23 5.11 44.82 1.47
123 124 6.850752 TGGTCATCACATACGGATGTATAT 57.149 37.500 14.23 7.46 44.82 0.86
124 125 7.948034 TGGTCATCACATACGGATGTATATA 57.052 36.000 14.23 0.00 44.82 0.86
125 126 7.996385 TGGTCATCACATACGGATGTATATAG 58.004 38.462 14.23 0.19 44.82 1.31
126 127 7.832187 TGGTCATCACATACGGATGTATATAGA 59.168 37.037 14.23 6.57 44.82 1.98
127 128 8.129840 GGTCATCACATACGGATGTATATAGAC 58.870 40.741 14.23 15.68 44.82 2.59
128 129 8.674607 GTCATCACATACGGATGTATATAGACA 58.325 37.037 14.23 2.07 44.82 3.41
129 130 9.408648 TCATCACATACGGATGTATATAGACAT 57.591 33.333 14.23 12.70 44.82 3.06
161 162 7.440523 AGTGTAGATTCACTCATTTTGTTCC 57.559 36.000 0.00 0.00 44.07 3.62
162 163 6.147821 AGTGTAGATTCACTCATTTTGTTCCG 59.852 38.462 0.00 0.00 44.07 4.30
163 164 5.995282 TGTAGATTCACTCATTTTGTTCCGT 59.005 36.000 0.00 0.00 0.00 4.69
164 165 7.117236 GTGTAGATTCACTCATTTTGTTCCGTA 59.883 37.037 0.00 0.00 35.68 4.02
165 166 6.481954 AGATTCACTCATTTTGTTCCGTAC 57.518 37.500 0.00 0.00 0.00 3.67
166 167 4.718858 TTCACTCATTTTGTTCCGTACG 57.281 40.909 8.69 8.69 0.00 3.67
167 168 3.719924 TCACTCATTTTGTTCCGTACGT 58.280 40.909 15.21 0.00 0.00 3.57
168 169 4.869215 TCACTCATTTTGTTCCGTACGTA 58.131 39.130 15.21 0.00 0.00 3.57
169 170 4.919168 TCACTCATTTTGTTCCGTACGTAG 59.081 41.667 15.21 0.00 0.00 3.51
171 172 4.919754 ACTCATTTTGTTCCGTACGTAGTC 59.080 41.667 15.21 2.53 43.93 2.59
172 173 4.869215 TCATTTTGTTCCGTACGTAGTCA 58.131 39.130 15.21 5.16 43.93 3.41
173 174 4.681025 TCATTTTGTTCCGTACGTAGTCAC 59.319 41.667 15.21 3.79 43.93 3.67
174 175 2.704725 TTGTTCCGTACGTAGTCACC 57.295 50.000 15.21 0.00 43.93 4.02
175 176 1.603456 TGTTCCGTACGTAGTCACCA 58.397 50.000 15.21 0.00 43.93 4.17
176 177 2.161855 TGTTCCGTACGTAGTCACCAT 58.838 47.619 15.21 0.00 43.93 3.55
177 178 2.557924 TGTTCCGTACGTAGTCACCATT 59.442 45.455 15.21 0.00 43.93 3.16
178 179 3.005684 TGTTCCGTACGTAGTCACCATTT 59.994 43.478 15.21 0.00 43.93 2.32
179 180 3.220507 TCCGTACGTAGTCACCATTTG 57.779 47.619 15.21 0.00 43.93 2.32
180 181 2.819019 TCCGTACGTAGTCACCATTTGA 59.181 45.455 15.21 0.00 43.93 2.69
181 182 3.255395 TCCGTACGTAGTCACCATTTGAA 59.745 43.478 15.21 0.00 43.93 2.69
182 183 3.989167 CCGTACGTAGTCACCATTTGAAA 59.011 43.478 15.21 0.00 43.93 2.69
183 184 4.143263 CCGTACGTAGTCACCATTTGAAAC 60.143 45.833 15.21 0.00 43.93 2.78
184 185 4.143263 CGTACGTAGTCACCATTTGAAACC 60.143 45.833 7.22 0.00 43.93 3.27
185 186 4.081322 ACGTAGTCACCATTTGAAACCT 57.919 40.909 0.00 0.00 29.74 3.50
186 187 4.062991 ACGTAGTCACCATTTGAAACCTC 58.937 43.478 0.00 0.00 29.74 3.85
187 188 4.202326 ACGTAGTCACCATTTGAAACCTCT 60.202 41.667 0.00 0.00 29.74 3.69
188 189 5.011329 ACGTAGTCACCATTTGAAACCTCTA 59.989 40.000 0.00 0.00 29.74 2.43
189 190 5.577164 CGTAGTCACCATTTGAAACCTCTAG 59.423 44.000 0.00 0.00 35.39 2.43
190 191 5.825593 AGTCACCATTTGAAACCTCTAGA 57.174 39.130 0.00 0.00 35.39 2.43
191 192 6.187727 AGTCACCATTTGAAACCTCTAGAA 57.812 37.500 0.00 0.00 35.39 2.10
192 193 6.601332 AGTCACCATTTGAAACCTCTAGAAA 58.399 36.000 0.00 0.00 35.39 2.52
193 194 6.486993 AGTCACCATTTGAAACCTCTAGAAAC 59.513 38.462 0.00 0.00 35.39 2.78
194 195 6.262273 GTCACCATTTGAAACCTCTAGAAACA 59.738 38.462 0.00 0.00 35.39 2.83
195 196 6.262273 TCACCATTTGAAACCTCTAGAAACAC 59.738 38.462 0.00 0.00 0.00 3.32
196 197 6.039270 CACCATTTGAAACCTCTAGAAACACA 59.961 38.462 0.00 0.00 0.00 3.72
197 198 6.605594 ACCATTTGAAACCTCTAGAAACACAA 59.394 34.615 0.00 0.00 0.00 3.33
213 214 8.040716 AGAAACACAAATATTTAGGAACGGAG 57.959 34.615 0.00 0.00 0.00 4.63
215 216 5.190677 ACACAAATATTTAGGAACGGAGGG 58.809 41.667 0.00 0.00 0.00 4.30
220 221 6.667558 AATATTTAGGAACGGAGGGAGTAG 57.332 41.667 0.00 0.00 0.00 2.57
227 228 0.320697 ACGGAGGGAGTAGTTTGCAC 59.679 55.000 0.00 0.00 0.00 4.57
246 247 3.061697 GCACACTTGTAATACACGCTACC 59.938 47.826 0.00 0.00 0.00 3.18
296 297 1.677966 CCTGCAGCTGCCATGTTCT 60.678 57.895 34.64 0.00 41.18 3.01
351 352 1.878953 ACCACCAGTGATGTTTCGTC 58.121 50.000 0.00 0.00 0.00 4.20
355 356 1.068474 CCAGTGATGTTTCGTCGTCC 58.932 55.000 0.00 0.00 0.00 4.79
356 357 0.708370 CAGTGATGTTTCGTCGTCCG 59.292 55.000 0.00 0.00 38.13 4.79
357 358 0.388134 AGTGATGTTTCGTCGTCCGG 60.388 55.000 0.00 0.00 37.11 5.14
358 359 1.735198 TGATGTTTCGTCGTCCGGC 60.735 57.895 0.00 0.00 37.11 6.13
359 360 2.785105 GATGTTTCGTCGTCCGGCG 61.785 63.158 7.45 7.45 45.47 6.46
390 397 4.864334 CATGCGGTGGCCTCCTCC 62.864 72.222 21.24 12.44 38.85 4.30
416 423 3.432588 CGCCGTGTCCTCTCGTCT 61.433 66.667 0.00 0.00 0.00 4.18
432 439 6.161855 TCTCGTCTAGATAAAACCATGCAT 57.838 37.500 0.00 0.00 0.00 3.96
444 451 2.023673 ACCATGCATCCACCGTATTTG 58.976 47.619 0.00 0.00 0.00 2.32
543 550 2.816689 TCACTGTATTATTCGCCCACG 58.183 47.619 0.00 0.00 42.01 4.94
555 562 2.895372 CCCACGCGGCTATGAACC 60.895 66.667 12.47 0.00 0.00 3.62
598 605 3.003897 TCGTCAGTAATGGTTTTGGTTGC 59.996 43.478 0.00 0.00 0.00 4.17
599 606 3.243234 CGTCAGTAATGGTTTTGGTTGCA 60.243 43.478 0.00 0.00 0.00 4.08
600 607 4.688021 GTCAGTAATGGTTTTGGTTGCAA 58.312 39.130 0.00 0.00 0.00 4.08
601 608 5.112686 GTCAGTAATGGTTTTGGTTGCAAA 58.887 37.500 0.00 0.00 0.00 3.68
602 609 5.582665 GTCAGTAATGGTTTTGGTTGCAAAA 59.417 36.000 0.00 0.00 0.00 2.44
603 610 6.092807 GTCAGTAATGGTTTTGGTTGCAAAAA 59.907 34.615 0.00 0.00 36.04 1.94
625 632 6.751514 AAAGAATGGTTTTGGTTGTTTTCC 57.248 33.333 0.00 0.00 0.00 3.13
626 633 4.776349 AGAATGGTTTTGGTTGTTTTCCC 58.224 39.130 0.00 0.00 0.00 3.97
627 634 3.569194 ATGGTTTTGGTTGTTTTCCCC 57.431 42.857 0.00 0.00 0.00 4.81
628 635 2.552367 TGGTTTTGGTTGTTTTCCCCT 58.448 42.857 0.00 0.00 0.00 4.79
629 636 3.721021 TGGTTTTGGTTGTTTTCCCCTA 58.279 40.909 0.00 0.00 0.00 3.53
634 641 4.376225 TTGGTTGTTTTCCCCTACTAGG 57.624 45.455 0.00 0.00 34.30 3.02
670 677 3.061563 GCGTTCAAAGTTCAAACCCAAAC 59.938 43.478 0.00 0.00 0.00 2.93
683 691 2.431942 CAAACCCGGACCGACGAG 60.432 66.667 17.49 3.45 35.47 4.18
689 697 4.831307 CGGACCGACGAGGCGAAG 62.831 72.222 8.64 0.00 46.52 3.79
691 699 2.202453 GACCGACGAGGCGAAGAC 60.202 66.667 0.00 0.00 46.52 3.01
707 715 0.969894 AGACTTTCCTCCGGTCACTG 59.030 55.000 0.00 0.00 32.98 3.66
756 764 2.363795 TGAGCTCCCCACTACCGG 60.364 66.667 12.15 0.00 0.00 5.28
857 865 0.612744 TGCATGAATGTCCCGTCTCA 59.387 50.000 0.00 0.00 0.00 3.27
867 875 3.036084 CCGTCTCACGTGTGTGCC 61.036 66.667 16.51 5.22 46.01 5.01
869 877 1.591594 CGTCTCACGTGTGTGCCTT 60.592 57.895 16.51 0.00 46.01 4.35
870 878 1.548973 CGTCTCACGTGTGTGCCTTC 61.549 60.000 16.51 1.59 46.01 3.46
872 880 0.464036 TCTCACGTGTGTGCCTTCTT 59.536 50.000 16.51 0.00 46.01 2.52
873 881 1.684450 TCTCACGTGTGTGCCTTCTTA 59.316 47.619 16.51 0.00 46.01 2.10
874 882 2.299013 TCTCACGTGTGTGCCTTCTTAT 59.701 45.455 16.51 0.00 46.01 1.73
901 909 5.447010 GCAATCTCCTTCTCAATTCTCAACG 60.447 44.000 0.00 0.00 0.00 4.10
949 960 3.775654 CCCTCTCTGCGTCACCCC 61.776 72.222 0.00 0.00 0.00 4.95
951 962 2.681778 CTCTCTGCGTCACCCCCT 60.682 66.667 0.00 0.00 0.00 4.79
985 1000 4.009675 TCTTCAATCTTCCATTCCGTTGG 58.990 43.478 0.00 0.00 38.18 3.77
1062 1086 2.103042 GCTGCTAACTGCCGTCCTG 61.103 63.158 0.00 0.00 42.00 3.86
1088 1112 1.456705 ACGCCCAAAACACCACCAT 60.457 52.632 0.00 0.00 0.00 3.55
1090 1114 1.459455 CGCCCAAAACACCACCATGA 61.459 55.000 0.00 0.00 0.00 3.07
1349 1395 2.893895 CGGCAGCTGCGACATCAT 60.894 61.111 31.19 0.00 43.26 2.45
1403 1628 4.473520 ACCCTTCGGCATCAGCGG 62.474 66.667 0.00 0.00 43.41 5.52
1414 1639 2.894257 ATCAGCGGCACCAACCAGA 61.894 57.895 1.45 0.00 0.00 3.86
1447 1672 1.148310 CTACAACTGCACCGACCTTG 58.852 55.000 0.00 0.00 0.00 3.61
1584 1989 2.365635 ATACCGGGGAGCTGCACT 60.366 61.111 5.74 0.00 0.00 4.40
1679 2084 2.191354 CTTGTCGAGTACACGGCCGA 62.191 60.000 35.90 6.51 38.00 5.54
1775 2180 0.528017 TCTGACGGCATGTCTGACTC 59.472 55.000 9.51 0.00 46.70 3.36
1787 2192 3.434309 TGTCTGACTCCATCATCTGTCA 58.566 45.455 9.51 0.00 36.48 3.58
1879 2284 8.693542 AAGAATTTCAATTTAGTACTGCATGC 57.306 30.769 11.82 11.82 0.00 4.06
1880 2285 7.829725 AGAATTTCAATTTAGTACTGCATGCA 58.170 30.769 21.29 21.29 0.00 3.96
1881 2286 8.472413 AGAATTTCAATTTAGTACTGCATGCAT 58.528 29.630 22.97 13.83 0.00 3.96
1882 2287 7.997107 ATTTCAATTTAGTACTGCATGCATG 57.003 32.000 22.97 22.70 0.00 4.06
1883 2288 6.513806 TTCAATTTAGTACTGCATGCATGT 57.486 33.333 26.79 21.81 0.00 3.21
1884 2289 7.622893 TTCAATTTAGTACTGCATGCATGTA 57.377 32.000 26.79 21.99 0.00 2.29
1885 2290 7.015226 TCAATTTAGTACTGCATGCATGTAC 57.985 36.000 31.60 31.60 37.42 2.90
1886 2291 6.823182 TCAATTTAGTACTGCATGCATGTACT 59.177 34.615 36.81 36.81 45.72 2.73
1887 2292 6.851222 ATTTAGTACTGCATGCATGTACTC 57.149 37.500 37.77 24.19 43.70 2.59
1888 2293 3.185246 AGTACTGCATGCATGTACTCC 57.815 47.619 33.63 21.37 41.86 3.85
1889 2294 2.158900 AGTACTGCATGCATGTACTCCC 60.159 50.000 33.63 21.15 41.86 4.30
1890 2295 0.914644 ACTGCATGCATGTACTCCCT 59.085 50.000 26.79 1.45 0.00 4.20
1891 2296 1.134280 ACTGCATGCATGTACTCCCTC 60.134 52.381 26.79 8.94 0.00 4.30
1892 2297 0.181114 TGCATGCATGTACTCCCTCC 59.819 55.000 26.79 8.24 0.00 4.30
1893 2298 0.882042 GCATGCATGTACTCCCTCCG 60.882 60.000 26.79 0.00 0.00 4.63
1894 2299 0.465705 CATGCATGTACTCCCTCCGT 59.534 55.000 18.91 0.00 0.00 4.69
1895 2300 1.134401 CATGCATGTACTCCCTCCGTT 60.134 52.381 18.91 0.00 0.00 4.44
1896 2301 0.535335 TGCATGTACTCCCTCCGTTC 59.465 55.000 0.00 0.00 0.00 3.95
1897 2302 0.179081 GCATGTACTCCCTCCGTTCC 60.179 60.000 0.00 0.00 0.00 3.62
1898 2303 0.464452 CATGTACTCCCTCCGTTCCC 59.536 60.000 0.00 0.00 0.00 3.97
1899 2304 0.042131 ATGTACTCCCTCCGTTCCCA 59.958 55.000 0.00 0.00 0.00 4.37
1900 2305 0.178926 TGTACTCCCTCCGTTCCCAA 60.179 55.000 0.00 0.00 0.00 4.12
1901 2306 0.978907 GTACTCCCTCCGTTCCCAAA 59.021 55.000 0.00 0.00 0.00 3.28
1902 2307 1.558294 GTACTCCCTCCGTTCCCAAAT 59.442 52.381 0.00 0.00 0.00 2.32
1903 2308 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
1904 2309 2.488836 ACTCCCTCCGTTCCCAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
1905 2310 3.660959 ACTCCCTCCGTTCCCAAATATA 58.339 45.455 0.00 0.00 0.00 0.86
1906 2311 4.042174 ACTCCCTCCGTTCCCAAATATAA 58.958 43.478 0.00 0.00 0.00 0.98
1907 2312 4.102681 ACTCCCTCCGTTCCCAAATATAAG 59.897 45.833 0.00 0.00 0.00 1.73
1908 2313 4.042174 TCCCTCCGTTCCCAAATATAAGT 58.958 43.478 0.00 0.00 0.00 2.24
1909 2314 4.102054 TCCCTCCGTTCCCAAATATAAGTC 59.898 45.833 0.00 0.00 0.00 3.01
1910 2315 4.102681 CCCTCCGTTCCCAAATATAAGTCT 59.897 45.833 0.00 0.00 0.00 3.24
1911 2316 5.397559 CCCTCCGTTCCCAAATATAAGTCTT 60.398 44.000 0.00 0.00 0.00 3.01
1912 2317 6.120220 CCTCCGTTCCCAAATATAAGTCTTT 58.880 40.000 0.00 0.00 0.00 2.52
1913 2318 6.260271 CCTCCGTTCCCAAATATAAGTCTTTC 59.740 42.308 0.00 0.00 0.00 2.62
1914 2319 6.954232 TCCGTTCCCAAATATAAGTCTTTCT 58.046 36.000 0.00 0.00 0.00 2.52
1915 2320 8.081517 TCCGTTCCCAAATATAAGTCTTTCTA 57.918 34.615 0.00 0.00 0.00 2.10
1916 2321 8.202137 TCCGTTCCCAAATATAAGTCTTTCTAG 58.798 37.037 0.00 0.00 0.00 2.43
1917 2322 8.202137 CCGTTCCCAAATATAAGTCTTTCTAGA 58.798 37.037 0.00 0.00 0.00 2.43
1918 2323 9.250624 CGTTCCCAAATATAAGTCTTTCTAGAG 57.749 37.037 0.00 0.00 0.00 2.43
1941 2346 9.263538 AGAGATTCTACTAAGTGACTACATACG 57.736 37.037 0.00 0.00 0.00 3.06
1942 2347 8.380743 AGATTCTACTAAGTGACTACATACGG 57.619 38.462 0.00 0.00 0.00 4.02
1943 2348 8.209584 AGATTCTACTAAGTGACTACATACGGA 58.790 37.037 0.00 0.00 0.00 4.69
1944 2349 7.783090 TTCTACTAAGTGACTACATACGGAG 57.217 40.000 0.00 0.00 0.00 4.63
1945 2350 4.897025 ACTAAGTGACTACATACGGAGC 57.103 45.455 0.00 0.00 0.00 4.70
1946 2351 4.267536 ACTAAGTGACTACATACGGAGCA 58.732 43.478 0.00 0.00 0.00 4.26
1947 2352 4.703575 ACTAAGTGACTACATACGGAGCAA 59.296 41.667 0.00 0.00 0.00 3.91
1948 2353 4.530710 AAGTGACTACATACGGAGCAAA 57.469 40.909 0.00 0.00 0.00 3.68
1949 2354 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
1950 2355 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
1951 2356 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
1952 2357 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
1953 2358 5.350365 GTGACTACATACGGAGCAAAATGAA 59.650 40.000 0.00 0.00 0.00 2.57
1954 2359 6.037172 GTGACTACATACGGAGCAAAATGAAT 59.963 38.462 0.00 0.00 0.00 2.57
1955 2360 6.037062 TGACTACATACGGAGCAAAATGAATG 59.963 38.462 0.00 0.00 0.00 2.67
1956 2361 6.112734 ACTACATACGGAGCAAAATGAATGA 58.887 36.000 0.00 0.00 0.00 2.57
1957 2362 5.895636 ACATACGGAGCAAAATGAATGAA 57.104 34.783 0.00 0.00 0.00 2.57
1958 2363 6.455360 ACATACGGAGCAAAATGAATGAAT 57.545 33.333 0.00 0.00 0.00 2.57
1959 2364 6.498304 ACATACGGAGCAAAATGAATGAATC 58.502 36.000 0.00 0.00 0.00 2.52
1960 2365 6.319658 ACATACGGAGCAAAATGAATGAATCT 59.680 34.615 0.00 0.00 0.00 2.40
1961 2366 7.498900 ACATACGGAGCAAAATGAATGAATCTA 59.501 33.333 0.00 0.00 0.00 1.98
1962 2367 6.124088 ACGGAGCAAAATGAATGAATCTAC 57.876 37.500 0.00 0.00 0.00 2.59
1963 2368 5.647658 ACGGAGCAAAATGAATGAATCTACA 59.352 36.000 0.00 0.00 0.00 2.74
1964 2369 5.967674 CGGAGCAAAATGAATGAATCTACAC 59.032 40.000 0.00 0.00 0.00 2.90
1965 2370 6.183360 CGGAGCAAAATGAATGAATCTACACT 60.183 38.462 0.00 0.00 0.00 3.55
1966 2371 7.192232 GGAGCAAAATGAATGAATCTACACTC 58.808 38.462 0.00 0.00 0.00 3.51
1967 2372 7.066766 GGAGCAAAATGAATGAATCTACACTCT 59.933 37.037 0.00 0.00 0.00 3.24
1968 2373 9.102757 GAGCAAAATGAATGAATCTACACTCTA 57.897 33.333 0.00 0.00 0.00 2.43
1969 2374 9.453572 AGCAAAATGAATGAATCTACACTCTAA 57.546 29.630 0.00 0.00 0.00 2.10
2042 2447 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
2043 2448 7.909485 AAGACTTATATTTAGGAACGGAGGA 57.091 36.000 0.00 0.00 0.00 3.71
2044 2449 7.909485 AGACTTATATTTAGGAACGGAGGAA 57.091 36.000 0.00 0.00 0.00 3.36
2056 2461 9.543231 TTAGGAACGGAGGAAGTATATTCATAT 57.457 33.333 0.00 0.00 0.00 1.78
2377 2797 9.512435 GAAATATCAATCTTCCTCACATTTGTG 57.488 33.333 4.29 4.29 46.91 3.33
2401 2826 4.929146 TTTTCCTTCTCCTTTCCTAGGG 57.071 45.455 9.46 0.00 44.86 3.53
2515 2960 1.597461 GTACCCAGCTCACCAGGAC 59.403 63.158 0.00 0.00 0.00 3.85
2684 5680 2.342650 GCAACATGTGTGCGGGGAT 61.343 57.895 14.36 0.00 0.00 3.85
2916 5912 2.635787 ATTGGCCTCCGCATCAGCAT 62.636 55.000 3.32 0.00 42.27 3.79
2917 5913 1.981951 TTGGCCTCCGCATCAGCATA 61.982 55.000 3.32 0.00 42.27 3.14
3062 6069 2.359726 TGCTGCGGCATACAAGCA 60.360 55.556 18.37 6.42 44.28 3.91
3078 6085 4.491676 ACAAGCATCATGACATTTGAAGC 58.508 39.130 17.09 1.78 37.91 3.86
3128 6135 2.359478 GCCAGTGTTGGGGTACGG 60.359 66.667 0.00 0.00 45.16 4.02
3200 6539 1.755179 AAGCGGACATGGAGATTTGG 58.245 50.000 0.00 0.00 0.00 3.28
3290 6633 3.770666 CGGGCGGAGTTCACATATATAG 58.229 50.000 0.00 0.00 0.00 1.31
3389 6738 9.239551 ACTATGTTAAGGGGATTTACAAGAAAC 57.760 33.333 0.00 0.00 34.36 2.78
3431 6780 8.137437 GCGTACCTACTAGATGTAAATGGTTTA 58.863 37.037 0.00 0.00 31.98 2.01
3466 6827 5.855740 ACTAGTATGGCTGGTTTACTCTC 57.144 43.478 0.00 0.00 35.20 3.20
3470 6831 5.735766 AGTATGGCTGGTTTACTCTCTTTC 58.264 41.667 0.00 0.00 0.00 2.62
3476 6838 5.870433 GGCTGGTTTACTCTCTTTCTTAGTC 59.130 44.000 0.00 0.00 0.00 2.59
3480 6842 6.781014 TGGTTTACTCTCTTTCTTAGTCAGGA 59.219 38.462 0.00 0.00 0.00 3.86
3485 6849 5.841783 ACTCTCTTTCTTAGTCAGGAGGTTT 59.158 40.000 0.00 0.00 0.00 3.27
3488 6853 5.621193 TCTTTCTTAGTCAGGAGGTTTTGG 58.379 41.667 0.00 0.00 0.00 3.28
3498 6863 2.159156 AGGAGGTTTTGGTCGTTTTTGC 60.159 45.455 0.00 0.00 0.00 3.68
3569 7112 5.116084 TGATTATGGGGTCTGGAAAAGAG 57.884 43.478 0.00 0.00 34.84 2.85
3596 7139 9.762381 TTGGGTTGAGATTGTAATACCTAATTT 57.238 29.630 0.00 0.00 0.00 1.82
3597 7140 9.762381 TGGGTTGAGATTGTAATACCTAATTTT 57.238 29.630 0.00 0.00 0.00 1.82
3615 7158 9.760660 CCTAATTTTAACTTTTGAGTCGATCAG 57.239 33.333 0.00 0.00 39.68 2.90
3700 7245 2.102578 GAAAAGCATGCCCATACCTGT 58.897 47.619 15.66 0.00 0.00 4.00
3759 7851 1.002142 GTAAACCCAACAGAACGCACC 60.002 52.381 0.00 0.00 0.00 5.01
3797 7889 7.452880 TCTGTAGCATAAGCAAACAATCTTT 57.547 32.000 0.00 0.00 45.49 2.52
3820 7914 2.198827 TTAGCCACACTGGTTCATGG 57.801 50.000 0.00 0.00 40.46 3.66
4130 9184 7.073208 TCATTATGAATGTAGTACTCCCTCCA 58.927 38.462 0.00 0.00 39.87 3.86
4148 9202 5.183140 CCCTCCATTTTTATATACAAGGCCG 59.817 44.000 0.00 0.00 0.00 6.13
4173 9227 6.821665 GCAAACTCATATTACAGGTACCAAGA 59.178 38.462 15.94 0.00 0.00 3.02
4207 9261 6.900568 TGCCTTGTTTTGTAAATCAACTTG 57.099 33.333 0.00 0.00 35.61 3.16
4238 9292 7.759489 TGTTTACTGGGATCATTAATATGCC 57.241 36.000 0.00 7.86 35.52 4.40
4244 9298 3.489738 GGGATCATTAATATGCCGCATGC 60.490 47.826 16.40 7.91 41.77 4.06
4259 9313 2.581216 CATGCATGCTAGGAAGGGAT 57.419 50.000 20.33 0.00 0.00 3.85
4270 9324 4.262420 GCTAGGAAGGGATAGAAAGCTGAG 60.262 50.000 0.00 0.00 0.00 3.35
4275 9329 3.663198 AGGGATAGAAAGCTGAGTGGAT 58.337 45.455 0.00 0.00 0.00 3.41
4315 9369 8.631676 CATGCATGCAAGTATTAAACATGTTA 57.368 30.769 26.68 0.00 40.15 2.41
4318 9372 8.951243 TGCATGCAAGTATTAAACATGTTACTA 58.049 29.630 20.30 0.00 40.15 1.82
4319 9373 9.781834 GCATGCAAGTATTAAACATGTTACTAA 57.218 29.630 14.21 8.30 40.15 2.24
4349 9403 9.107367 GAGAAAACATCATTAACTTTTGTCTCG 57.893 33.333 0.00 0.00 0.00 4.04
4353 9407 9.965824 AAACATCATTAACTTTTGTCTCGATTT 57.034 25.926 0.00 0.00 0.00 2.17
4358 9412 8.836413 TCATTAACTTTTGTCTCGATTTCTGTT 58.164 29.630 0.00 0.00 0.00 3.16
4390 9444 9.722056 CCTTGTATAGATGCAAAGTGTATTTTC 57.278 33.333 0.00 0.00 32.12 2.29
4393 9447 8.673711 TGTATAGATGCAAAGTGTATTTTCCAC 58.326 33.333 0.00 0.00 0.00 4.02
4419 9473 5.531287 GTGGCCTTGTATAAGTAAATGGAGG 59.469 44.000 3.32 0.00 31.80 4.30
4627 10273 6.717084 TGATAGTATCATATGGATCCCTAGCG 59.283 42.308 9.90 0.00 37.44 4.26
4755 10401 5.582550 TGATCGTCTAGTAGCTGTGAAATG 58.417 41.667 0.00 0.00 0.00 2.32
4888 11409 9.424319 GGATCAAAACGAGCTCTTATATATGAA 57.576 33.333 12.85 0.00 0.00 2.57
5030 11646 5.522097 CACCATAGTTGTAATACACGCATCA 59.478 40.000 0.00 0.00 0.00 3.07
5306 11922 2.420628 TGTTGCAAAATCCAGCGAAG 57.579 45.000 0.00 0.00 0.00 3.79
5377 11993 3.614092 ACAAGCATGTGAAGTCATAGGG 58.386 45.455 0.00 0.00 38.69 3.53
5383 11999 5.132648 AGCATGTGAAGTCATAGGGGAAATA 59.867 40.000 0.00 0.00 0.00 1.40
5397 12013 3.951680 GGGGAAATAGAGGAAATCGCAAA 59.048 43.478 0.00 0.00 0.00 3.68
5535 12151 3.732212 AGCAAAACTTTTCTGGATTGCC 58.268 40.909 4.82 0.00 43.00 4.52
5547 12163 6.618287 TTCTGGATTGCCGTAAGATATTTG 57.382 37.500 0.00 0.00 43.02 2.32
5554 12171 5.554437 TGCCGTAAGATATTTGTCCCATA 57.446 39.130 0.00 0.00 43.02 2.74
5699 12323 4.471025 TGAGGAGATCAGCCTTGTGAATTA 59.529 41.667 8.37 0.00 35.44 1.40
5773 12401 5.415701 TCAAAGAGCCTACATTCATTTCCAC 59.584 40.000 0.00 0.00 0.00 4.02
5777 12405 3.088532 GCCTACATTCATTTCCACCACA 58.911 45.455 0.00 0.00 0.00 4.17
5956 12606 9.814899 AATTAATTTTGATGAGTGTTGTGTTCA 57.185 25.926 0.00 0.00 0.00 3.18
5973 12623 5.049828 GTGTTCAAACTGCTAAAAGGCATT 58.950 37.500 0.00 0.00 41.63 3.56
5980 12630 3.760684 ACTGCTAAAAGGCATTGGAGAAG 59.239 43.478 0.12 0.12 41.63 2.85
6015 12667 2.564504 GCCCTCTTGCCTTCTTTTTGAT 59.435 45.455 0.00 0.00 0.00 2.57
6039 12691 1.612739 GGACTTCCCCCGGTCTCTT 60.613 63.158 0.00 0.00 33.46 2.85
6127 12780 5.691754 GCAAATTACAACTCACAAAAGGAGG 59.308 40.000 0.00 0.00 36.70 4.30
6178 12832 1.361668 CGGCTGGACGAAAGGACATG 61.362 60.000 0.00 0.00 35.47 3.21
6208 12862 1.078709 CCTATTATGCGACCGCCATG 58.921 55.000 12.08 0.00 41.09 3.66
6219 12873 2.336478 CCGCCATGCAAACCGGTTA 61.336 57.895 22.60 5.30 36.18 2.85
6310 12964 0.242017 GAGTAGCAACCACGTACGGT 59.758 55.000 21.06 5.72 42.71 4.83
6429 13083 2.226200 TGCGCATATTCCAATCCGAATG 59.774 45.455 5.66 0.00 34.35 2.67
6503 13157 7.897575 CATCTATGCTAACTGGAGGAATAAC 57.102 40.000 0.00 0.00 0.00 1.89
6609 13264 6.985117 ACACAAAAGCAACATCATGAACTAT 58.015 32.000 0.00 0.00 0.00 2.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.725110 AAAAGAGCGTGCAACTATATGAG 57.275 39.130 0.00 0.00 31.75 2.90
22 23 4.528596 TCCCTTTTCTTCCACACACAAAAA 59.471 37.500 0.00 0.00 0.00 1.94
25 26 3.374042 TCCCTTTTCTTCCACACACAA 57.626 42.857 0.00 0.00 0.00 3.33
26 27 3.138283 AGATCCCTTTTCTTCCACACACA 59.862 43.478 0.00 0.00 0.00 3.72
27 28 3.756117 AGATCCCTTTTCTTCCACACAC 58.244 45.455 0.00 0.00 0.00 3.82
28 29 4.398319 GAAGATCCCTTTTCTTCCACACA 58.602 43.478 2.70 0.00 42.05 3.72
43 44 3.580895 GGAGGAAGTAGATGGGAAGATCC 59.419 52.174 0.00 0.00 35.23 3.36
44 45 3.257127 CGGAGGAAGTAGATGGGAAGATC 59.743 52.174 0.00 0.00 0.00 2.75
45 46 3.235200 CGGAGGAAGTAGATGGGAAGAT 58.765 50.000 0.00 0.00 0.00 2.40
46 47 2.024273 ACGGAGGAAGTAGATGGGAAGA 60.024 50.000 0.00 0.00 0.00 2.87
47 48 2.389715 ACGGAGGAAGTAGATGGGAAG 58.610 52.381 0.00 0.00 0.00 3.46
48 49 2.544844 ACGGAGGAAGTAGATGGGAA 57.455 50.000 0.00 0.00 0.00 3.97
49 50 2.385803 GAACGGAGGAAGTAGATGGGA 58.614 52.381 0.00 0.00 0.00 4.37
50 51 1.413077 GGAACGGAGGAAGTAGATGGG 59.587 57.143 0.00 0.00 0.00 4.00
51 52 2.389715 AGGAACGGAGGAAGTAGATGG 58.610 52.381 0.00 0.00 0.00 3.51
52 53 5.593679 TTTAGGAACGGAGGAAGTAGATG 57.406 43.478 0.00 0.00 0.00 2.90
53 54 8.493787 AATATTTAGGAACGGAGGAAGTAGAT 57.506 34.615 0.00 0.00 0.00 1.98
54 55 7.909485 AATATTTAGGAACGGAGGAAGTAGA 57.091 36.000 0.00 0.00 0.00 2.59
55 56 7.985752 ACAAATATTTAGGAACGGAGGAAGTAG 59.014 37.037 0.00 0.00 0.00 2.57
56 57 7.854337 ACAAATATTTAGGAACGGAGGAAGTA 58.146 34.615 0.00 0.00 0.00 2.24
57 58 6.718294 ACAAATATTTAGGAACGGAGGAAGT 58.282 36.000 0.00 0.00 0.00 3.01
58 59 7.048512 AGACAAATATTTAGGAACGGAGGAAG 58.951 38.462 0.00 0.00 0.00 3.46
59 60 6.954232 AGACAAATATTTAGGAACGGAGGAA 58.046 36.000 0.00 0.00 0.00 3.36
60 61 6.555463 AGACAAATATTTAGGAACGGAGGA 57.445 37.500 0.00 0.00 0.00 3.71
61 62 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
62 63 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
63 64 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
64 65 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
84 85 9.958180 TGTGATGACCATTTAAAATCTCTAGAA 57.042 29.630 0.00 0.00 0.00 2.10
88 89 8.830580 CGTATGTGATGACCATTTAAAATCTCT 58.169 33.333 0.00 0.00 0.00 3.10
89 90 8.070171 CCGTATGTGATGACCATTTAAAATCTC 58.930 37.037 0.00 0.00 0.00 2.75
90 91 7.773224 TCCGTATGTGATGACCATTTAAAATCT 59.227 33.333 0.00 0.00 0.00 2.40
91 92 7.925993 TCCGTATGTGATGACCATTTAAAATC 58.074 34.615 0.00 0.00 0.00 2.17
92 93 7.873719 TCCGTATGTGATGACCATTTAAAAT 57.126 32.000 0.00 0.00 0.00 1.82
93 94 7.338196 ACATCCGTATGTGATGACCATTTAAAA 59.662 33.333 15.95 0.00 44.79 1.52
94 95 6.826231 ACATCCGTATGTGATGACCATTTAAA 59.174 34.615 15.95 0.00 44.79 1.52
95 96 6.353323 ACATCCGTATGTGATGACCATTTAA 58.647 36.000 15.95 0.00 44.79 1.52
96 97 5.924356 ACATCCGTATGTGATGACCATTTA 58.076 37.500 15.95 0.00 44.79 1.40
97 98 4.780815 ACATCCGTATGTGATGACCATTT 58.219 39.130 15.95 0.00 44.79 2.32
98 99 4.422073 ACATCCGTATGTGATGACCATT 57.578 40.909 15.95 0.00 44.79 3.16
99 100 5.745312 ATACATCCGTATGTGATGACCAT 57.255 39.130 15.95 7.00 45.99 3.55
100 101 6.850752 ATATACATCCGTATGTGATGACCA 57.149 37.500 15.95 5.58 45.99 4.02
101 102 8.129840 GTCTATATACATCCGTATGTGATGACC 58.870 40.741 15.95 0.00 45.99 4.02
102 103 8.674607 TGTCTATATACATCCGTATGTGATGAC 58.325 37.037 15.95 5.93 45.99 3.06
103 104 8.801882 TGTCTATATACATCCGTATGTGATGA 57.198 34.615 15.95 0.00 45.99 2.92
138 139 6.073222 ACGGAACAAAATGAGTGAATCTACAC 60.073 38.462 0.00 0.00 40.60 2.90
139 140 5.995282 ACGGAACAAAATGAGTGAATCTACA 59.005 36.000 0.00 0.00 0.00 2.74
140 141 6.481954 ACGGAACAAAATGAGTGAATCTAC 57.518 37.500 0.00 0.00 0.00 2.59
141 142 6.309494 CGTACGGAACAAAATGAGTGAATCTA 59.691 38.462 7.57 0.00 0.00 1.98
142 143 5.120208 CGTACGGAACAAAATGAGTGAATCT 59.880 40.000 7.57 0.00 0.00 2.40
143 144 5.107220 ACGTACGGAACAAAATGAGTGAATC 60.107 40.000 21.06 0.00 0.00 2.52
144 145 4.753107 ACGTACGGAACAAAATGAGTGAAT 59.247 37.500 21.06 0.00 0.00 2.57
145 146 4.121317 ACGTACGGAACAAAATGAGTGAA 58.879 39.130 21.06 0.00 0.00 3.18
146 147 3.719924 ACGTACGGAACAAAATGAGTGA 58.280 40.909 21.06 0.00 0.00 3.41
147 148 4.682860 ACTACGTACGGAACAAAATGAGTG 59.317 41.667 21.06 0.00 0.00 3.51
148 149 4.874970 ACTACGTACGGAACAAAATGAGT 58.125 39.130 21.06 0.00 0.00 3.41
149 150 4.919168 TGACTACGTACGGAACAAAATGAG 59.081 41.667 21.06 0.00 0.00 2.90
150 151 4.681025 GTGACTACGTACGGAACAAAATGA 59.319 41.667 21.06 0.00 0.00 2.57
151 152 4.143263 GGTGACTACGTACGGAACAAAATG 60.143 45.833 21.06 0.00 0.00 2.32
152 153 3.989817 GGTGACTACGTACGGAACAAAAT 59.010 43.478 21.06 0.00 0.00 1.82
153 154 3.181482 TGGTGACTACGTACGGAACAAAA 60.181 43.478 21.06 3.58 0.00 2.44
154 155 2.360483 TGGTGACTACGTACGGAACAAA 59.640 45.455 21.06 3.91 0.00 2.83
155 156 1.952990 TGGTGACTACGTACGGAACAA 59.047 47.619 21.06 0.00 0.00 2.83
156 157 1.603456 TGGTGACTACGTACGGAACA 58.397 50.000 21.06 11.38 0.00 3.18
157 158 2.927553 ATGGTGACTACGTACGGAAC 57.072 50.000 21.06 6.21 0.00 3.62
158 159 3.255395 TCAAATGGTGACTACGTACGGAA 59.745 43.478 21.06 6.30 0.00 4.30
159 160 2.819019 TCAAATGGTGACTACGTACGGA 59.181 45.455 21.06 10.81 0.00 4.69
160 161 3.220507 TCAAATGGTGACTACGTACGG 57.779 47.619 21.06 5.00 0.00 4.02
161 162 4.143263 GGTTTCAAATGGTGACTACGTACG 60.143 45.833 15.01 15.01 35.39 3.67
162 163 4.992951 AGGTTTCAAATGGTGACTACGTAC 59.007 41.667 0.00 0.00 35.39 3.67
163 164 5.011329 AGAGGTTTCAAATGGTGACTACGTA 59.989 40.000 0.00 0.00 35.39 3.57
164 165 4.062991 GAGGTTTCAAATGGTGACTACGT 58.937 43.478 0.00 0.00 35.39 3.57
165 166 4.315803 AGAGGTTTCAAATGGTGACTACG 58.684 43.478 0.00 0.00 35.39 3.51
166 167 6.698380 TCTAGAGGTTTCAAATGGTGACTAC 58.302 40.000 0.00 0.00 35.39 2.73
167 168 6.928348 TCTAGAGGTTTCAAATGGTGACTA 57.072 37.500 0.00 0.00 35.39 2.59
168 169 5.825593 TCTAGAGGTTTCAAATGGTGACT 57.174 39.130 0.00 0.00 35.39 3.41
169 170 6.262273 TGTTTCTAGAGGTTTCAAATGGTGAC 59.738 38.462 0.00 0.00 35.39 3.67
170 171 6.262273 GTGTTTCTAGAGGTTTCAAATGGTGA 59.738 38.462 0.00 0.00 0.00 4.02
171 172 6.039270 TGTGTTTCTAGAGGTTTCAAATGGTG 59.961 38.462 0.00 0.00 0.00 4.17
172 173 6.126409 TGTGTTTCTAGAGGTTTCAAATGGT 58.874 36.000 0.00 0.00 0.00 3.55
173 174 6.633500 TGTGTTTCTAGAGGTTTCAAATGG 57.367 37.500 0.00 0.00 0.00 3.16
185 186 9.158233 CCGTTCCTAAATATTTGTGTTTCTAGA 57.842 33.333 11.05 0.00 0.00 2.43
186 187 9.158233 TCCGTTCCTAAATATTTGTGTTTCTAG 57.842 33.333 11.05 0.00 0.00 2.43
187 188 9.158233 CTCCGTTCCTAAATATTTGTGTTTCTA 57.842 33.333 11.05 0.00 0.00 2.10
188 189 7.120726 CCTCCGTTCCTAAATATTTGTGTTTCT 59.879 37.037 11.05 0.00 0.00 2.52
189 190 7.248437 CCTCCGTTCCTAAATATTTGTGTTTC 58.752 38.462 11.05 0.00 0.00 2.78
190 191 6.152154 CCCTCCGTTCCTAAATATTTGTGTTT 59.848 38.462 11.05 0.00 0.00 2.83
191 192 5.650703 CCCTCCGTTCCTAAATATTTGTGTT 59.349 40.000 11.05 0.00 0.00 3.32
192 193 5.045432 TCCCTCCGTTCCTAAATATTTGTGT 60.045 40.000 11.05 0.00 0.00 3.72
193 194 5.433526 TCCCTCCGTTCCTAAATATTTGTG 58.566 41.667 11.05 3.85 0.00 3.33
194 195 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
195 196 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
196 197 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
197 198 6.141790 ACTACTCCCTCCGTTCCTAAATATT 58.858 40.000 0.00 0.00 0.00 1.28
203 204 3.094572 CAAACTACTCCCTCCGTTCCTA 58.905 50.000 0.00 0.00 0.00 2.94
204 205 1.900486 CAAACTACTCCCTCCGTTCCT 59.100 52.381 0.00 0.00 0.00 3.36
205 206 1.675116 GCAAACTACTCCCTCCGTTCC 60.675 57.143 0.00 0.00 0.00 3.62
207 208 1.053424 TGCAAACTACTCCCTCCGTT 58.947 50.000 0.00 0.00 0.00 4.44
213 214 2.572290 ACAAGTGTGCAAACTACTCCC 58.428 47.619 10.71 0.00 0.00 4.30
215 216 7.288672 GTGTATTACAAGTGTGCAAACTACTC 58.711 38.462 10.71 0.91 0.00 2.59
220 221 3.662186 GCGTGTATTACAAGTGTGCAAAC 59.338 43.478 0.00 0.00 30.18 2.93
227 228 3.302434 CGTGGTAGCGTGTATTACAAGTG 59.698 47.826 10.72 0.83 30.18 3.16
296 297 2.289819 TGAGCACAAGCATGACTGATCA 60.290 45.455 0.00 0.00 45.49 2.92
416 423 4.133820 CGGTGGATGCATGGTTTTATCTA 58.866 43.478 2.46 0.00 0.00 1.98
432 439 3.118186 CCTATCCAACCAAATACGGTGGA 60.118 47.826 0.00 0.00 39.95 4.02
444 451 1.227674 CGAGGCAGCCTATCCAACC 60.228 63.158 16.16 0.00 31.76 3.77
555 562 2.100603 GAGAGGCGGTCTCGTTCG 59.899 66.667 3.61 0.00 46.82 3.95
563 570 3.063084 GACGACCTGAGAGGCGGT 61.063 66.667 1.54 0.00 39.63 5.68
600 607 7.309499 GGGAAAACAACCAAAACCATTCTTTTT 60.309 33.333 0.00 0.00 0.00 1.94
601 608 6.151985 GGGAAAACAACCAAAACCATTCTTTT 59.848 34.615 0.00 0.00 0.00 2.27
602 609 5.650266 GGGAAAACAACCAAAACCATTCTTT 59.350 36.000 0.00 0.00 0.00 2.52
603 610 5.189928 GGGAAAACAACCAAAACCATTCTT 58.810 37.500 0.00 0.00 0.00 2.52
604 611 4.384757 GGGGAAAACAACCAAAACCATTCT 60.385 41.667 0.00 0.00 0.00 2.40
605 612 3.880490 GGGGAAAACAACCAAAACCATTC 59.120 43.478 0.00 0.00 0.00 2.67
606 613 3.525609 AGGGGAAAACAACCAAAACCATT 59.474 39.130 0.00 0.00 0.00 3.16
607 614 3.119319 AGGGGAAAACAACCAAAACCAT 58.881 40.909 0.00 0.00 0.00 3.55
608 615 2.552367 AGGGGAAAACAACCAAAACCA 58.448 42.857 0.00 0.00 0.00 3.67
609 616 3.707611 AGTAGGGGAAAACAACCAAAACC 59.292 43.478 0.00 0.00 0.00 3.27
610 617 5.010314 CCTAGTAGGGGAAAACAACCAAAAC 59.990 44.000 8.50 0.00 0.00 2.43
611 618 5.103601 TCCTAGTAGGGGAAAACAACCAAAA 60.104 40.000 16.44 0.00 35.59 2.44
612 619 4.416179 TCCTAGTAGGGGAAAACAACCAAA 59.584 41.667 16.44 0.00 35.59 3.28
613 620 3.982052 TCCTAGTAGGGGAAAACAACCAA 59.018 43.478 16.44 0.00 35.59 3.67
614 621 3.585732 CTCCTAGTAGGGGAAAACAACCA 59.414 47.826 11.02 0.00 38.47 3.67
615 622 3.586174 ACTCCTAGTAGGGGAAAACAACC 59.414 47.826 23.63 0.00 38.47 3.77
616 623 4.904895 ACTCCTAGTAGGGGAAAACAAC 57.095 45.455 23.63 0.00 38.47 3.32
627 634 4.654915 GCCTCCTTACCTACTCCTAGTAG 58.345 52.174 7.05 7.05 45.93 2.57
628 635 3.072184 CGCCTCCTTACCTACTCCTAGTA 59.928 52.174 0.00 0.00 0.00 1.82
629 636 2.158638 CGCCTCCTTACCTACTCCTAGT 60.159 54.545 0.00 0.00 0.00 2.57
634 641 2.097825 TGAACGCCTCCTTACCTACTC 58.902 52.381 0.00 0.00 0.00 2.59
683 691 4.187056 CGGAGGAAAGTCTTCGCC 57.813 61.111 0.00 0.00 31.77 5.54
696 704 0.962489 CCTATAGCCAGTGACCGGAG 59.038 60.000 9.46 0.00 0.00 4.63
697 705 0.469331 CCCTATAGCCAGTGACCGGA 60.469 60.000 9.46 0.00 0.00 5.14
698 706 2.050269 CCCTATAGCCAGTGACCGG 58.950 63.158 0.00 0.00 0.00 5.28
699 707 1.367840 GCCCTATAGCCAGTGACCG 59.632 63.158 0.00 0.00 0.00 4.79
756 764 1.291877 GGCATCACCACGACACTCAC 61.292 60.000 0.00 0.00 38.86 3.51
821 829 1.454572 GCATGCATATGGTTGCCGGA 61.455 55.000 14.21 0.00 42.06 5.14
857 865 2.688507 CTGATAAGAAGGCACACACGT 58.311 47.619 0.00 0.00 0.00 4.49
867 875 6.580788 TGAGAAGGAGATTGCTGATAAGAAG 58.419 40.000 0.00 0.00 0.00 2.85
869 877 6.550938 TTGAGAAGGAGATTGCTGATAAGA 57.449 37.500 0.00 0.00 0.00 2.10
870 878 7.716123 AGAATTGAGAAGGAGATTGCTGATAAG 59.284 37.037 0.00 0.00 0.00 1.73
872 880 7.134362 AGAATTGAGAAGGAGATTGCTGATA 57.866 36.000 0.00 0.00 0.00 2.15
873 881 6.003859 AGAATTGAGAAGGAGATTGCTGAT 57.996 37.500 0.00 0.00 0.00 2.90
874 882 5.046087 TGAGAATTGAGAAGGAGATTGCTGA 60.046 40.000 0.00 0.00 0.00 4.26
901 909 3.063485 GTGAAGAGAGGCAGTTGAAGAC 58.937 50.000 0.00 0.00 0.00 3.01
985 1000 1.643832 GCATCGGGCGATCTTGTTC 59.356 57.895 0.00 0.00 31.62 3.18
1243 1279 1.100510 TACGTCCAGATGGAGTTCCG 58.899 55.000 0.65 4.99 46.49 4.30
1302 1339 2.592287 GTGTTGGCGACCCGGAAA 60.592 61.111 0.73 0.00 0.00 3.13
1349 1395 1.968493 AGGAGGCGTTCACTTTGAGTA 59.032 47.619 0.00 0.00 0.00 2.59
1403 1628 0.877743 GAAGAGCTTCTGGTTGGTGC 59.122 55.000 3.06 0.00 36.69 5.01
1414 1639 4.562552 GCAGTTGTAGAGGAAGAAGAGCTT 60.563 45.833 0.00 0.00 40.25 3.74
1501 1726 2.034842 CGAACGAGTTGAATATGGACGC 60.035 50.000 0.00 0.00 0.00 5.19
1540 1765 1.335872 CCATTTGTTGTCGGGCTTGTC 60.336 52.381 0.00 0.00 0.00 3.18
1584 1989 1.447663 CACCGGCATCATCGACACA 60.448 57.895 0.00 0.00 0.00 3.72
1775 2180 5.287674 ACCTGAACTATGACAGATGATGG 57.712 43.478 0.00 0.00 36.38 3.51
1862 2267 7.019774 AGTACATGCATGCAGTACTAAATTG 57.980 36.000 35.68 25.52 44.68 2.32
1865 2270 5.116180 GGAGTACATGCATGCAGTACTAAA 58.884 41.667 36.11 17.67 46.01 1.85
1878 2283 0.179081 GGAACGGAGGGAGTACATGC 60.179 60.000 0.00 0.00 0.00 4.06
1879 2284 0.464452 GGGAACGGAGGGAGTACATG 59.536 60.000 0.00 0.00 0.00 3.21
1880 2285 0.042131 TGGGAACGGAGGGAGTACAT 59.958 55.000 0.00 0.00 0.00 2.29
1881 2286 0.178926 TTGGGAACGGAGGGAGTACA 60.179 55.000 0.00 0.00 0.00 2.90
1882 2287 0.978907 TTTGGGAACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
1883 2288 1.961133 ATTTGGGAACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
1884 2289 1.961133 TATTTGGGAACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
1885 2290 4.102681 ACTTATATTTGGGAACGGAGGGAG 59.897 45.833 0.00 0.00 0.00 4.30
1886 2291 4.042174 ACTTATATTTGGGAACGGAGGGA 58.958 43.478 0.00 0.00 0.00 4.20
1887 2292 4.102681 AGACTTATATTTGGGAACGGAGGG 59.897 45.833 0.00 0.00 0.00 4.30
1888 2293 5.291905 AGACTTATATTTGGGAACGGAGG 57.708 43.478 0.00 0.00 0.00 4.30
1889 2294 7.048512 AGAAAGACTTATATTTGGGAACGGAG 58.951 38.462 0.00 0.00 0.00 4.63
1890 2295 6.954232 AGAAAGACTTATATTTGGGAACGGA 58.046 36.000 0.00 0.00 0.00 4.69
1891 2296 8.202137 TCTAGAAAGACTTATATTTGGGAACGG 58.798 37.037 0.00 0.00 0.00 4.44
1892 2297 9.250624 CTCTAGAAAGACTTATATTTGGGAACG 57.749 37.037 0.00 0.00 0.00 3.95
1915 2320 9.263538 CGTATGTAGTCACTTAGTAGAATCTCT 57.736 37.037 0.00 0.00 0.00 3.10
1916 2321 8.497554 CCGTATGTAGTCACTTAGTAGAATCTC 58.502 40.741 0.00 0.00 0.00 2.75
1917 2322 8.209584 TCCGTATGTAGTCACTTAGTAGAATCT 58.790 37.037 0.00 0.00 0.00 2.40
1918 2323 8.375608 TCCGTATGTAGTCACTTAGTAGAATC 57.624 38.462 0.00 0.00 0.00 2.52
1919 2324 7.041235 GCTCCGTATGTAGTCACTTAGTAGAAT 60.041 40.741 0.00 0.00 0.00 2.40
1920 2325 6.259608 GCTCCGTATGTAGTCACTTAGTAGAA 59.740 42.308 0.00 0.00 0.00 2.10
1921 2326 5.757320 GCTCCGTATGTAGTCACTTAGTAGA 59.243 44.000 0.00 0.00 0.00 2.59
1922 2327 5.526479 TGCTCCGTATGTAGTCACTTAGTAG 59.474 44.000 0.00 0.00 0.00 2.57
1923 2328 5.430886 TGCTCCGTATGTAGTCACTTAGTA 58.569 41.667 0.00 0.00 0.00 1.82
1924 2329 4.267536 TGCTCCGTATGTAGTCACTTAGT 58.732 43.478 0.00 0.00 0.00 2.24
1925 2330 4.895224 TGCTCCGTATGTAGTCACTTAG 57.105 45.455 0.00 0.00 0.00 2.18
1926 2331 5.648178 TTTGCTCCGTATGTAGTCACTTA 57.352 39.130 0.00 0.00 0.00 2.24
1927 2332 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
1928 2333 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
1929 2334 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
1930 2335 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
1931 2336 6.257849 TCATTCATTTTGCTCCGTATGTAGTC 59.742 38.462 0.00 0.00 0.00 2.59
1932 2337 6.112734 TCATTCATTTTGCTCCGTATGTAGT 58.887 36.000 0.00 0.00 0.00 2.73
1933 2338 6.603237 TCATTCATTTTGCTCCGTATGTAG 57.397 37.500 0.00 0.00 0.00 2.74
1934 2339 6.993786 TTCATTCATTTTGCTCCGTATGTA 57.006 33.333 0.00 0.00 0.00 2.29
1935 2340 5.895636 TTCATTCATTTTGCTCCGTATGT 57.104 34.783 0.00 0.00 0.00 2.29
1936 2341 6.732154 AGATTCATTCATTTTGCTCCGTATG 58.268 36.000 0.00 0.00 0.00 2.39
1937 2342 6.949352 AGATTCATTCATTTTGCTCCGTAT 57.051 33.333 0.00 0.00 0.00 3.06
1938 2343 6.821160 TGTAGATTCATTCATTTTGCTCCGTA 59.179 34.615 0.00 0.00 0.00 4.02
1939 2344 5.647658 TGTAGATTCATTCATTTTGCTCCGT 59.352 36.000 0.00 0.00 0.00 4.69
1940 2345 5.967674 GTGTAGATTCATTCATTTTGCTCCG 59.032 40.000 0.00 0.00 0.00 4.63
1941 2346 7.066766 AGAGTGTAGATTCATTCATTTTGCTCC 59.933 37.037 0.00 0.00 0.00 4.70
1942 2347 7.983307 AGAGTGTAGATTCATTCATTTTGCTC 58.017 34.615 0.00 0.00 0.00 4.26
1943 2348 7.934855 AGAGTGTAGATTCATTCATTTTGCT 57.065 32.000 0.00 0.00 0.00 3.91
2016 2421 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
2017 2422 8.765517 TCCTCCGTTCCTAAATATAAGTCTTTT 58.234 33.333 0.00 0.00 0.00 2.27
2018 2423 8.315220 TCCTCCGTTCCTAAATATAAGTCTTT 57.685 34.615 0.00 0.00 0.00 2.52
2019 2424 7.909485 TCCTCCGTTCCTAAATATAAGTCTT 57.091 36.000 0.00 0.00 0.00 3.01
2020 2425 7.564292 ACTTCCTCCGTTCCTAAATATAAGTCT 59.436 37.037 0.00 0.00 0.00 3.24
2021 2426 7.724287 ACTTCCTCCGTTCCTAAATATAAGTC 58.276 38.462 0.00 0.00 0.00 3.01
2022 2427 7.672122 ACTTCCTCCGTTCCTAAATATAAGT 57.328 36.000 0.00 0.00 0.00 2.24
2027 2432 9.370930 TGAATATACTTCCTCCGTTCCTAAATA 57.629 33.333 0.00 0.00 0.00 1.40
2028 2433 8.258850 TGAATATACTTCCTCCGTTCCTAAAT 57.741 34.615 0.00 0.00 0.00 1.40
2029 2434 7.664552 TGAATATACTTCCTCCGTTCCTAAA 57.335 36.000 0.00 0.00 0.00 1.85
2030 2435 7.850935 ATGAATATACTTCCTCCGTTCCTAA 57.149 36.000 0.00 0.00 0.00 2.69
2031 2436 9.543231 AATATGAATATACTTCCTCCGTTCCTA 57.457 33.333 0.00 0.00 0.00 2.94
2032 2437 8.437274 AATATGAATATACTTCCTCCGTTCCT 57.563 34.615 0.00 0.00 0.00 3.36
2033 2438 9.503399 AAAATATGAATATACTTCCTCCGTTCC 57.497 33.333 0.00 0.00 0.00 3.62
2064 2469 4.695455 CACGGACTAAACTGGTTCAATCAT 59.305 41.667 0.00 0.00 0.00 2.45
2070 2475 2.036862 ACCTCACGGACTAAACTGGTTC 59.963 50.000 0.00 0.00 0.00 3.62
2235 2652 8.076781 TGAAACGACCGAAATTTCATAAATTCA 58.923 29.630 17.99 15.39 40.05 2.57
2304 2723 8.149973 ACAAAGACAAAAGCGAGAGTTAATTA 57.850 30.769 0.00 0.00 0.00 1.40
2401 2826 8.451908 AATGTAAACTGCCAACTAGATAATCC 57.548 34.615 0.00 0.00 0.00 3.01
2684 5680 8.385491 AGCCACAAAGAATACATGATATGGATA 58.615 33.333 0.00 0.00 30.92 2.59
2729 5725 0.840288 AGGTATGGTGGCCACACTCA 60.840 55.000 35.78 24.90 46.85 3.41
2810 5806 1.271379 ACGGATGGAGTTTTCTGGGTG 60.271 52.381 0.00 0.00 0.00 4.61
2916 5912 2.260822 AGAAGAGCTCTTGGTTGGCTA 58.739 47.619 33.07 0.00 36.11 3.93
2917 5913 1.063183 AGAAGAGCTCTTGGTTGGCT 58.937 50.000 33.07 19.06 36.11 4.75
3062 6069 3.003394 TCGGGCTTCAAATGTCATGAT 57.997 42.857 0.00 0.00 0.00 2.45
3078 6085 1.473434 GCTACAGTTCCCTGAATCGGG 60.473 57.143 0.00 0.00 46.13 5.14
3097 6104 0.523072 ACTGGCATCATCAACAACGC 59.477 50.000 0.00 0.00 0.00 4.84
3135 6143 6.936900 TCAAGAAGAAACCTAACTTCATCAGG 59.063 38.462 0.00 0.00 43.13 3.86
3200 6539 9.979578 AAGATATCATAGGCGATATTGATCTTC 57.020 33.333 5.32 0.00 38.44 2.87
3251 6590 1.938577 CCGCAGATGATGGACAAAGAG 59.061 52.381 0.00 0.00 0.00 2.85
3290 6633 4.547532 ACGATCAAACTCACTGTCACTAC 58.452 43.478 0.00 0.00 0.00 2.73
3389 6738 0.385849 ACGCGCATGTTGTGTTCATG 60.386 50.000 5.73 0.00 43.58 3.07
3431 6780 7.179338 CCAGCCATACTAGTAGGAGATAAATGT 59.821 40.741 15.94 0.00 0.00 2.71
3466 6827 5.377478 ACCAAAACCTCCTGACTAAGAAAG 58.623 41.667 0.00 0.00 0.00 2.62
3470 6831 3.244112 ACGACCAAAACCTCCTGACTAAG 60.244 47.826 0.00 0.00 0.00 2.18
3476 6838 3.443976 CAAAAACGACCAAAACCTCCTG 58.556 45.455 0.00 0.00 0.00 3.86
3480 6842 1.473278 TCGCAAAAACGACCAAAACCT 59.527 42.857 0.00 0.00 37.09 3.50
3485 6849 0.658897 GACCTCGCAAAAACGACCAA 59.341 50.000 0.00 0.00 37.09 3.67
3488 6853 2.750301 AAAGACCTCGCAAAAACGAC 57.250 45.000 0.00 0.00 37.09 4.34
3569 7112 8.747538 ATTAGGTATTACAATCTCAACCCAAC 57.252 34.615 0.00 0.00 0.00 3.77
3596 7139 8.433421 AGTTTTCTGATCGACTCAAAAGTTAA 57.567 30.769 0.00 0.00 35.28 2.01
3597 7140 9.706691 ATAGTTTTCTGATCGACTCAAAAGTTA 57.293 29.630 0.00 0.00 35.28 2.24
3599 7142 7.657761 ACATAGTTTTCTGATCGACTCAAAAGT 59.342 33.333 0.00 0.00 38.88 2.66
3759 7851 1.405821 CTACAGAACTAGACCAGCGGG 59.594 57.143 0.00 0.00 41.29 6.13
3820 7914 7.013274 TCCTGCAAATATCCTATTTACAAGCAC 59.987 37.037 0.00 0.00 0.00 4.40
3851 8040 4.441079 GCAGGAAAATGCATGCTCTGTTAT 60.441 41.667 20.33 0.00 45.77 1.89
3957 8839 5.401531 TCTCACTACCTGGAATGTAACAC 57.598 43.478 0.00 0.00 0.00 3.32
4130 9184 7.107639 AGTTTGCGGCCTTGTATATAAAAAT 57.892 32.000 0.00 0.00 0.00 1.82
4148 9202 6.821665 TCTTGGTACCTGTAATATGAGTTTGC 59.178 38.462 14.36 0.00 0.00 3.68
4180 9234 9.777297 AAGTTGATTTACAAAACAAGGCATTAT 57.223 25.926 0.00 0.00 40.36 1.28
4185 9239 6.756542 AGACAAGTTGATTTACAAAACAAGGC 59.243 34.615 10.54 0.00 40.36 4.35
4186 9240 8.702163 AAGACAAGTTGATTTACAAAACAAGG 57.298 30.769 10.54 0.00 40.36 3.61
4199 9253 7.123547 TCCCAGTAAACAAAAAGACAAGTTGAT 59.876 33.333 10.54 0.00 0.00 2.57
4200 9254 6.434652 TCCCAGTAAACAAAAAGACAAGTTGA 59.565 34.615 10.54 0.00 0.00 3.18
4220 9274 3.346315 TGCGGCATATTAATGATCCCAG 58.654 45.455 0.00 0.00 34.84 4.45
4244 9298 4.041444 AGCTTTCTATCCCTTCCTAGCATG 59.959 45.833 0.00 0.00 0.00 4.06
4249 9303 4.651503 CACTCAGCTTTCTATCCCTTCCTA 59.348 45.833 0.00 0.00 0.00 2.94
4259 9313 4.890158 TGACAATCCACTCAGCTTTCTA 57.110 40.909 0.00 0.00 0.00 2.10
4270 9324 5.404366 GCATGCAATCATAATGACAATCCAC 59.596 40.000 14.21 0.00 0.00 4.02
4321 9375 8.621286 AGACAAAAGTTAATGATGTTTTCTCGT 58.379 29.630 0.00 0.00 0.00 4.18
4326 9380 9.965824 AATCGAGACAAAAGTTAATGATGTTTT 57.034 25.926 0.00 0.00 0.00 2.43
4330 9384 9.270576 CAGAAATCGAGACAAAAGTTAATGATG 57.729 33.333 0.00 0.00 0.00 3.07
4349 9403 1.963515 ACAAGGCCACCAACAGAAATC 59.036 47.619 5.01 0.00 0.00 2.17
4353 9407 3.178046 TCTATACAAGGCCACCAACAGA 58.822 45.455 5.01 0.00 0.00 3.41
4358 9412 1.843206 TGCATCTATACAAGGCCACCA 59.157 47.619 5.01 0.00 0.00 4.17
4390 9444 3.350219 ACTTATACAAGGCCACTGTGG 57.650 47.619 22.46 22.46 36.51 4.17
4393 9447 6.119536 TCCATTTACTTATACAAGGCCACTG 58.880 40.000 5.01 4.04 35.97 3.66
4419 9473 9.498176 TCTTTTGTAAACCAGAAGTTATACTCC 57.502 33.333 0.00 0.00 37.88 3.85
4627 10273 6.037610 CCTCTGAGTACATGTATCTTTTTGGC 59.962 42.308 9.18 0.00 0.00 4.52
4674 10320 4.876107 CACCTTTACCAAGCTGATCGTTAT 59.124 41.667 0.00 0.00 0.00 1.89
4744 10390 3.319972 AGTCATGCAAACATTTCACAGCT 59.680 39.130 0.00 0.00 32.87 4.24
4903 11424 5.872617 TGAATAAATGTACCTGTCCAACGAG 59.127 40.000 0.00 0.00 0.00 4.18
4906 11522 7.103641 TCTCTGAATAAATGTACCTGTCCAAC 58.896 38.462 0.00 0.00 0.00 3.77
4914 11530 5.751586 TGGGGTTCTCTGAATAAATGTACC 58.248 41.667 0.00 0.00 0.00 3.34
5030 11646 3.205056 TGGGGCTTGATATCAAAGTGGAT 59.795 43.478 18.47 0.00 35.15 3.41
5124 11740 2.816087 GTCATTGAAAGCTTGCTCTCCA 59.184 45.455 5.89 0.00 0.00 3.86
5397 12013 6.458210 CACAAGCCAATTAAGGTCATCTTTT 58.542 36.000 0.00 0.00 36.93 2.27
5547 12163 5.738619 ACAAAGGGACAAAAATATGGGAC 57.261 39.130 0.00 0.00 0.00 4.46
5554 12171 6.128035 GCACAGAAAAACAAAGGGACAAAAAT 60.128 34.615 0.00 0.00 0.00 1.82
5562 12179 6.705381 TCATAATTGCACAGAAAAACAAAGGG 59.295 34.615 0.00 0.00 0.00 3.95
5595 12215 9.303537 GAATGAGAGACATGTAGGTTAAGTTAC 57.696 37.037 0.00 0.00 39.39 2.50
5777 12405 0.977395 GTACAGGCCACCTTCTCACT 59.023 55.000 5.01 0.00 0.00 3.41
5809 12438 1.337703 AGCTGCGCTTGTTCAATTTCA 59.662 42.857 9.73 0.00 33.89 2.69
5829 12458 9.772973 ATATGTTCTACTACAATGCCGAATTTA 57.227 29.630 0.00 0.00 0.00 1.40
5973 12623 1.142870 CTTGGTGGTTGTCCTTCTCCA 59.857 52.381 0.00 0.00 34.23 3.86
5980 12630 2.600470 GGGCCTTGGTGGTTGTCC 60.600 66.667 0.84 0.00 38.35 4.02
6007 12657 4.950475 GGGGAAGTCCTCCTTATCAAAAAG 59.050 45.833 0.00 0.00 44.68 2.27
6088 12741 6.934056 TGTAATTTGCATGCCAGACTATTTT 58.066 32.000 16.68 0.00 0.00 1.82
6100 12753 6.700960 TCCTTTTGTGAGTTGTAATTTGCATG 59.299 34.615 0.00 0.00 0.00 4.06
6108 12761 8.754991 TTATTTCCTCCTTTTGTGAGTTGTAA 57.245 30.769 0.00 0.00 0.00 2.41
6127 12780 9.811655 GGCTTTGAGTTGCTTTATTTTTATTTC 57.188 29.630 0.00 0.00 0.00 2.17
6208 12862 2.098607 GGGCTATCTTTAACCGGTTTGC 59.901 50.000 27.64 12.40 0.00 3.68
6238 12892 3.890674 GTGCAACCGATGGGAGAC 58.109 61.111 0.00 0.00 36.97 3.36
6310 12964 4.265904 TCTTCAGAGTTACGGCATGAAA 57.734 40.909 0.00 0.00 30.10 2.69
6312 12966 5.348986 GTTATCTTCAGAGTTACGGCATGA 58.651 41.667 0.00 0.00 0.00 3.07
6322 12976 5.012561 ACTTCTTGCAGGTTATCTTCAGAGT 59.987 40.000 0.00 0.00 0.00 3.24
6378 13032 3.245052 GGGCTATATGGAACTGCAGGAAT 60.245 47.826 19.93 8.18 0.00 3.01
6503 13157 8.462016 GGCCTTCCATACATATAGCTTTTAATG 58.538 37.037 0.00 0.00 0.00 1.90
6525 13179 2.749621 CTCTCGCAAAATTACTTGGCCT 59.250 45.455 3.32 0.00 0.00 5.19
6526 13180 2.159379 CCTCTCGCAAAATTACTTGGCC 60.159 50.000 0.00 0.00 0.00 5.36
6609 13264 2.372264 ACTAAAGCGACGATGGGTAGA 58.628 47.619 0.00 0.00 0.00 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.