Multiple sequence alignment - TraesCS7D01G156200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G156200 chr7D 100.000 3839 0 0 1 3839 104533342 104529504 0.000000e+00 7090.0
1 TraesCS7D01G156200 chr7D 90.703 441 16 10 3054 3492 84346141 84345724 7.200000e-157 564.0
2 TraesCS7D01G156200 chr7D 79.874 318 31 13 3058 3367 591693985 591693693 6.500000e-48 202.0
3 TraesCS7D01G156200 chr7D 96.341 82 3 0 2972 3053 104960073 104960154 6.690000e-28 135.0
4 TraesCS7D01G156200 chr7D 94.521 73 4 0 2652 2724 104530655 104530583 3.130000e-21 113.0
5 TraesCS7D01G156200 chr7D 94.521 73 4 0 2688 2760 104530691 104530619 3.130000e-21 113.0
6 TraesCS7D01G156200 chr7B 93.945 1503 64 13 1484 2968 62663074 62661581 0.000000e+00 2246.0
7 TraesCS7D01G156200 chr7B 80.851 329 54 8 1748 2067 677085041 677085369 2.290000e-62 250.0
8 TraesCS7D01G156200 chr7B 77.970 404 68 11 2100 2491 677085375 677085769 2.310000e-57 233.0
9 TraesCS7D01G156200 chr7B 98.571 70 1 0 1393 1462 62663131 62663062 1.450000e-24 124.0
10 TraesCS7D01G156200 chr7A 94.550 1266 48 5 1484 2728 108767591 108766326 0.000000e+00 1936.0
11 TraesCS7D01G156200 chr7A 92.786 402 28 1 3318 3719 360610197 360609797 7.150000e-162 580.0
12 TraesCS7D01G156200 chr7A 80.104 578 95 10 1924 2491 690537788 690537221 2.760000e-111 412.0
13 TraesCS7D01G156200 chr7A 91.133 203 12 4 355 551 108789120 108788918 1.760000e-68 270.0
14 TraesCS7D01G156200 chr7A 87.387 222 21 7 2690 2908 108766400 108766183 8.240000e-62 248.0
15 TraesCS7D01G156200 chrUn 95.740 892 15 2 2971 3839 27019469 27018578 0.000000e+00 1415.0
16 TraesCS7D01G156200 chrUn 84.068 590 90 2 680 1265 271900189 271899600 2.000000e-157 566.0
17 TraesCS7D01G156200 chrUn 84.068 590 90 2 680 1265 271916352 271915763 2.000000e-157 566.0
18 TraesCS7D01G156200 chr1D 95.409 893 16 4 2972 3839 97225058 97224166 0.000000e+00 1399.0
19 TraesCS7D01G156200 chr1D 85.000 320 34 9 3057 3365 15043031 15042715 2.880000e-81 313.0
20 TraesCS7D01G156200 chr1D 84.127 63 8 2 2964 3025 350663234 350663173 4.140000e-05 60.2
21 TraesCS7D01G156200 chr2D 93.759 721 17 7 3127 3824 629573028 629573743 0.000000e+00 1057.0
22 TraesCS7D01G156200 chr3D 93.343 721 20 14 3127 3824 84584124 84584839 0.000000e+00 1040.0
23 TraesCS7D01G156200 chr3D 92.857 84 4 1 2972 3053 93202224 93202141 1.870000e-23 121.0
24 TraesCS7D01G156200 chr3D 88.000 50 6 0 2972 3021 84583732 84583781 4.140000e-05 60.2
25 TraesCS7D01G156200 chr5D 97.826 598 12 1 3242 3839 550185296 550184700 0.000000e+00 1031.0
26 TraesCS7D01G156200 chr5D 84.786 585 86 2 680 1261 270257073 270256489 5.530000e-163 584.0
27 TraesCS7D01G156200 chr5D 83.934 610 78 14 3120 3715 548844871 548845474 2.000000e-157 566.0
28 TraesCS7D01G156200 chr6D 87.436 589 70 2 680 1264 69313781 69313193 0.000000e+00 675.0
29 TraesCS7D01G156200 chr6D 89.569 441 21 10 3054 3492 18529345 18529762 1.570000e-148 536.0
30 TraesCS7D01G156200 chr6D 85.577 312 32 8 3057 3357 25868896 25869205 8.010000e-82 315.0
31 TraesCS7D01G156200 chr6D 96.575 146 4 1 3695 3839 42532702 42532557 1.380000e-59 241.0
32 TraesCS7D01G156200 chr6D 83.333 66 9 2 2972 3036 436232816 436232752 4.140000e-05 60.2
33 TraesCS7D01G156200 chr6B 86.780 590 69 4 680 1265 286707774 286707190 0.000000e+00 649.0
34 TraesCS7D01G156200 chr3B 87.935 489 54 3 680 1163 729593249 729592761 4.300000e-159 571.0
35 TraesCS7D01G156200 chr3A 95.745 329 13 1 24 352 477792636 477792309 2.630000e-146 529.0
36 TraesCS7D01G156200 chr3A 83.073 384 49 10 3347 3719 25065510 25065132 6.150000e-88 335.0
37 TraesCS7D01G156200 chr3A 83.750 320 38 9 3057 3365 25065745 25065429 1.350000e-74 291.0
38 TraesCS7D01G156200 chr3A 95.122 123 6 0 3701 3823 1742125 1742003 1.090000e-45 195.0
39 TraesCS7D01G156200 chr5A 82.624 587 91 5 680 1262 696889903 696890482 3.420000e-140 508.0
40 TraesCS7D01G156200 chr5A 84.650 443 64 2 680 1118 696850797 696851239 4.550000e-119 438.0
41 TraesCS7D01G156200 chr4A 93.750 336 19 2 17 352 592775758 592775425 1.590000e-138 503.0
42 TraesCS7D01G156200 chr4A 93.750 336 19 2 17 352 593063835 593063502 1.590000e-138 503.0
43 TraesCS7D01G156200 chr4A 93.155 336 21 2 17 352 592496949 592496616 3.450000e-135 492.0
44 TraesCS7D01G156200 chr4A 91.964 336 25 2 17 352 591548135 591548468 1.610000e-128 470.0
45 TraesCS7D01G156200 chr4A 86.335 161 20 2 2222 2381 649055476 649055635 1.420000e-39 174.0
46 TraesCS7D01G156200 chr4A 87.586 145 16 2 2222 2365 649005687 649005830 2.370000e-37 167.0
47 TraesCS7D01G156200 chr4D 82.456 456 56 17 3273 3715 46723941 46723497 1.010000e-100 377.0
48 TraesCS7D01G156200 chr4D 88.087 277 6 6 3127 3380 465955437 465955165 1.730000e-78 303.0
49 TraesCS7D01G156200 chr4D 91.209 182 15 1 112 293 477989669 477989849 2.960000e-61 246.0
50 TraesCS7D01G156200 chr4D 92.308 91 7 0 24 114 477974259 477974349 3.110000e-26 130.0
51 TraesCS7D01G156200 chr4D 100.000 30 0 0 2972 3001 465955829 465955800 5.360000e-04 56.5
52 TraesCS7D01G156200 chr4D 100.000 29 0 0 2972 3000 143315993 143316021 2.000000e-03 54.7
53 TraesCS7D01G156200 chr6A 97.895 190 4 0 24 213 373113238 373113427 2.860000e-86 329.0
54 TraesCS7D01G156200 chr6A 97.222 108 3 0 245 352 373113421 373113528 2.360000e-42 183.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G156200 chr7D 104529504 104533342 3838 True 2438.666667 7090 96.347333 1 3839 3 chr7D.!!$R3 3838
1 TraesCS7D01G156200 chr7B 62661581 62663131 1550 True 1185.000000 2246 96.258000 1393 2968 2 chr7B.!!$R1 1575
2 TraesCS7D01G156200 chr7B 677085041 677085769 728 False 241.500000 250 79.410500 1748 2491 2 chr7B.!!$F1 743
3 TraesCS7D01G156200 chr7A 108766183 108767591 1408 True 1092.000000 1936 90.968500 1484 2908 2 chr7A.!!$R4 1424
4 TraesCS7D01G156200 chr7A 690537221 690537788 567 True 412.000000 412 80.104000 1924 2491 1 chr7A.!!$R3 567
5 TraesCS7D01G156200 chrUn 27018578 27019469 891 True 1415.000000 1415 95.740000 2971 3839 1 chrUn.!!$R1 868
6 TraesCS7D01G156200 chrUn 271899600 271900189 589 True 566.000000 566 84.068000 680 1265 1 chrUn.!!$R2 585
7 TraesCS7D01G156200 chrUn 271915763 271916352 589 True 566.000000 566 84.068000 680 1265 1 chrUn.!!$R3 585
8 TraesCS7D01G156200 chr1D 97224166 97225058 892 True 1399.000000 1399 95.409000 2972 3839 1 chr1D.!!$R2 867
9 TraesCS7D01G156200 chr2D 629573028 629573743 715 False 1057.000000 1057 93.759000 3127 3824 1 chr2D.!!$F1 697
10 TraesCS7D01G156200 chr3D 84583732 84584839 1107 False 550.100000 1040 90.671500 2972 3824 2 chr3D.!!$F1 852
11 TraesCS7D01G156200 chr5D 550184700 550185296 596 True 1031.000000 1031 97.826000 3242 3839 1 chr5D.!!$R2 597
12 TraesCS7D01G156200 chr5D 270256489 270257073 584 True 584.000000 584 84.786000 680 1261 1 chr5D.!!$R1 581
13 TraesCS7D01G156200 chr5D 548844871 548845474 603 False 566.000000 566 83.934000 3120 3715 1 chr5D.!!$F1 595
14 TraesCS7D01G156200 chr6D 69313193 69313781 588 True 675.000000 675 87.436000 680 1264 1 chr6D.!!$R2 584
15 TraesCS7D01G156200 chr6B 286707190 286707774 584 True 649.000000 649 86.780000 680 1265 1 chr6B.!!$R1 585
16 TraesCS7D01G156200 chr3A 25065132 25065745 613 True 313.000000 335 83.411500 3057 3719 2 chr3A.!!$R3 662
17 TraesCS7D01G156200 chr5A 696889903 696890482 579 False 508.000000 508 82.624000 680 1262 1 chr5A.!!$F2 582

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
216 217 0.032678 CTGGGATGGACGGATCGAAG 59.967 60.0 0.00 0.0 0.00 3.79 F
403 404 0.041312 CGTTGCCTCCGTGAGTTTTG 60.041 55.0 1.12 0.0 0.00 2.44 F
436 437 0.099968 GCTACCTGACACGACGCATA 59.900 55.0 0.00 0.0 0.00 3.14 F
1377 1382 0.105964 CTGAGTCCACACCGTTTCCA 59.894 55.0 0.00 0.0 0.00 3.53 F
1473 1478 0.178533 AACCGACCTCGTTCCAACAA 59.821 50.0 0.00 0.0 37.74 2.83 F
2556 2600 0.175989 GAAAGTCGGAAGGCGAGGAT 59.824 55.0 0.00 0.0 43.49 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1371 1376 0.041047 GTGCGTACCGGTTTGGAAAC 60.041 55.0 15.04 1.74 42.00 2.78 R
1480 1485 0.251165 CCCGGGTCTGTTGGATTTGT 60.251 55.0 14.18 0.00 0.00 2.83 R
1644 1655 0.307146 CGGGGAGATCGTCGTAGAAC 59.693 60.0 0.00 0.00 39.69 3.01 R
2531 2572 1.019805 GCCTTCCGACTTTCCTTCCG 61.020 60.0 0.00 0.00 0.00 4.30 R
2691 2738 1.105457 TGATATTTGTGCCCAGCTGC 58.895 50.0 8.66 0.00 0.00 5.25 R
3684 4009 2.554344 CCCCCTTTTCTCGTTCAATGGA 60.554 50.0 0.00 0.00 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.302559 AAAGCCCCTTTTCCTACTAGTG 57.697 45.455 5.39 0.00 28.27 2.74
23 24 2.917205 AGCCCCTTTTCCTACTAGTGT 58.083 47.619 5.39 0.00 0.00 3.55
24 25 4.070681 AGCCCCTTTTCCTACTAGTGTA 57.929 45.455 5.39 0.00 0.00 2.90
25 26 3.773667 AGCCCCTTTTCCTACTAGTGTAC 59.226 47.826 5.39 0.00 0.00 2.90
26 27 3.118482 GCCCCTTTTCCTACTAGTGTACC 60.118 52.174 5.39 0.00 0.00 3.34
27 28 4.359996 CCCCTTTTCCTACTAGTGTACCT 58.640 47.826 5.39 0.00 0.00 3.08
28 29 5.522641 CCCCTTTTCCTACTAGTGTACCTA 58.477 45.833 5.39 0.00 0.00 3.08
30 31 5.597594 CCCTTTTCCTACTAGTGTACCTAGG 59.402 48.000 7.41 7.41 46.39 3.02
31 32 6.193504 CCTTTTCCTACTAGTGTACCTAGGT 58.806 44.000 20.57 20.57 46.39 3.08
32 33 6.096564 CCTTTTCCTACTAGTGTACCTAGGTG 59.903 46.154 25.33 8.93 46.39 4.00
33 34 4.162040 TCCTACTAGTGTACCTAGGTGC 57.838 50.000 25.33 23.61 46.39 5.01
34 35 3.784763 TCCTACTAGTGTACCTAGGTGCT 59.215 47.826 27.54 21.31 46.39 4.40
35 36 4.136051 CCTACTAGTGTACCTAGGTGCTC 58.864 52.174 27.54 23.98 46.39 4.26
36 37 4.141436 CCTACTAGTGTACCTAGGTGCTCT 60.141 50.000 29.46 29.46 46.39 4.09
37 38 3.622630 ACTAGTGTACCTAGGTGCTCTG 58.377 50.000 32.38 25.40 46.39 3.35
38 39 1.187087 AGTGTACCTAGGTGCTCTGC 58.813 55.000 27.29 16.33 34.36 4.26
39 40 0.895530 GTGTACCTAGGTGCTCTGCA 59.104 55.000 27.54 12.63 35.60 4.41
40 41 1.134965 GTGTACCTAGGTGCTCTGCAG 60.135 57.143 27.54 7.63 40.08 4.41
41 42 1.272480 TGTACCTAGGTGCTCTGCAGA 60.272 52.381 27.54 17.19 40.08 4.26
42 43 1.825474 GTACCTAGGTGCTCTGCAGAA 59.175 52.381 25.33 0.00 40.08 3.02
43 44 1.352083 ACCTAGGTGCTCTGCAGAAA 58.648 50.000 18.85 6.25 40.08 2.52
44 45 1.002544 ACCTAGGTGCTCTGCAGAAAC 59.997 52.381 18.85 17.86 40.08 2.78
45 46 1.277557 CCTAGGTGCTCTGCAGAAACT 59.722 52.381 18.85 14.38 40.08 2.66
46 47 2.615869 CTAGGTGCTCTGCAGAAACTC 58.384 52.381 18.85 13.01 40.08 3.01
47 48 0.036022 AGGTGCTCTGCAGAAACTCC 59.964 55.000 18.85 20.54 40.08 3.85
48 49 0.036022 GGTGCTCTGCAGAAACTCCT 59.964 55.000 18.85 0.00 40.08 3.69
49 50 1.544314 GGTGCTCTGCAGAAACTCCTT 60.544 52.381 18.85 0.00 40.08 3.36
50 51 1.803555 GTGCTCTGCAGAAACTCCTTC 59.196 52.381 18.85 0.63 40.08 3.46
51 52 1.417517 TGCTCTGCAGAAACTCCTTCA 59.582 47.619 18.85 3.14 36.40 3.02
52 53 2.158769 TGCTCTGCAGAAACTCCTTCAA 60.159 45.455 18.85 0.00 36.40 2.69
53 54 2.880890 GCTCTGCAGAAACTCCTTCAAA 59.119 45.455 18.85 0.00 36.40 2.69
54 55 3.505293 GCTCTGCAGAAACTCCTTCAAAT 59.495 43.478 18.85 0.00 36.40 2.32
55 56 4.022503 GCTCTGCAGAAACTCCTTCAAATT 60.023 41.667 18.85 0.00 36.40 1.82
56 57 5.695851 TCTGCAGAAACTCCTTCAAATTC 57.304 39.130 15.67 0.00 36.40 2.17
57 58 5.380043 TCTGCAGAAACTCCTTCAAATTCT 58.620 37.500 15.67 0.00 36.40 2.40
58 59 5.829924 TCTGCAGAAACTCCTTCAAATTCTT 59.170 36.000 15.67 0.00 36.40 2.52
59 60 6.016777 TCTGCAGAAACTCCTTCAAATTCTTC 60.017 38.462 15.67 0.00 36.40 2.87
60 61 5.593909 TGCAGAAACTCCTTCAAATTCTTCA 59.406 36.000 0.00 0.00 36.40 3.02
61 62 6.148264 GCAGAAACTCCTTCAAATTCTTCAG 58.852 40.000 0.00 0.00 36.40 3.02
62 63 6.238869 GCAGAAACTCCTTCAAATTCTTCAGT 60.239 38.462 0.00 0.00 36.40 3.41
63 64 7.682981 GCAGAAACTCCTTCAAATTCTTCAGTT 60.683 37.037 0.00 0.00 36.40 3.16
64 65 7.646922 CAGAAACTCCTTCAAATTCTTCAGTTG 59.353 37.037 0.00 0.00 36.40 3.16
65 66 6.396829 AACTCCTTCAAATTCTTCAGTTGG 57.603 37.500 0.00 0.00 0.00 3.77
66 67 4.829492 ACTCCTTCAAATTCTTCAGTTGGG 59.171 41.667 0.00 0.00 0.00 4.12
67 68 4.151883 TCCTTCAAATTCTTCAGTTGGGG 58.848 43.478 0.00 0.00 0.00 4.96
68 69 4.141041 TCCTTCAAATTCTTCAGTTGGGGA 60.141 41.667 0.00 0.00 0.00 4.81
69 70 4.774200 CCTTCAAATTCTTCAGTTGGGGAT 59.226 41.667 0.00 0.00 0.00 3.85
70 71 5.105595 CCTTCAAATTCTTCAGTTGGGGATC 60.106 44.000 0.00 0.00 0.00 3.36
71 72 4.344104 TCAAATTCTTCAGTTGGGGATCC 58.656 43.478 1.92 1.92 0.00 3.36
72 73 4.088634 CAAATTCTTCAGTTGGGGATCCA 58.911 43.478 15.23 0.00 42.25 3.41
82 83 2.961531 TGGGGATCCAAAGAAAACGA 57.038 45.000 15.23 0.00 40.73 3.85
83 84 3.449746 TGGGGATCCAAAGAAAACGAT 57.550 42.857 15.23 0.00 40.73 3.73
84 85 3.352648 TGGGGATCCAAAGAAAACGATC 58.647 45.455 15.23 0.00 40.73 3.69
85 86 2.688446 GGGGATCCAAAGAAAACGATCC 59.312 50.000 15.23 6.42 46.78 3.36
87 88 4.357018 GGATCCAAAGAAAACGATCCAC 57.643 45.455 6.95 0.00 46.74 4.02
88 89 3.756434 GGATCCAAAGAAAACGATCCACA 59.244 43.478 6.95 0.00 46.74 4.17
89 90 4.399303 GGATCCAAAGAAAACGATCCACAT 59.601 41.667 6.95 0.00 46.74 3.21
90 91 5.449177 GGATCCAAAGAAAACGATCCACATC 60.449 44.000 6.95 0.00 46.74 3.06
91 92 4.651778 TCCAAAGAAAACGATCCACATCT 58.348 39.130 0.00 0.00 0.00 2.90
92 93 4.695455 TCCAAAGAAAACGATCCACATCTC 59.305 41.667 0.00 0.00 0.00 2.75
93 94 4.142600 CCAAAGAAAACGATCCACATCTCC 60.143 45.833 0.00 0.00 0.00 3.71
94 95 3.981071 AGAAAACGATCCACATCTCCA 57.019 42.857 0.00 0.00 0.00 3.86
95 96 3.600388 AGAAAACGATCCACATCTCCAC 58.400 45.455 0.00 0.00 0.00 4.02
96 97 2.403252 AAACGATCCACATCTCCACC 57.597 50.000 0.00 0.00 0.00 4.61
97 98 0.541863 AACGATCCACATCTCCACCC 59.458 55.000 0.00 0.00 0.00 4.61
98 99 1.338136 ACGATCCACATCTCCACCCC 61.338 60.000 0.00 0.00 0.00 4.95
99 100 1.447643 GATCCACATCTCCACCCCG 59.552 63.158 0.00 0.00 0.00 5.73
100 101 1.002921 ATCCACATCTCCACCCCGA 59.997 57.895 0.00 0.00 0.00 5.14
101 102 1.338136 ATCCACATCTCCACCCCGAC 61.338 60.000 0.00 0.00 0.00 4.79
102 103 2.584608 CACATCTCCACCCCGACC 59.415 66.667 0.00 0.00 0.00 4.79
103 104 1.990060 CACATCTCCACCCCGACCT 60.990 63.158 0.00 0.00 0.00 3.85
104 105 1.686110 ACATCTCCACCCCGACCTC 60.686 63.158 0.00 0.00 0.00 3.85
105 106 2.442272 ATCTCCACCCCGACCTCG 60.442 66.667 0.00 0.00 39.44 4.63
106 107 3.298300 ATCTCCACCCCGACCTCGT 62.298 63.158 0.00 0.00 37.74 4.18
107 108 3.450115 CTCCACCCCGACCTCGTC 61.450 72.222 0.00 0.00 37.74 4.20
116 117 3.139469 GACCTCGTCCCCGTCCTC 61.139 72.222 0.00 0.00 35.01 3.71
117 118 4.755507 ACCTCGTCCCCGTCCTCC 62.756 72.222 0.00 0.00 35.01 4.30
126 127 4.016706 CCGTCCTCCGTGGGCTTT 62.017 66.667 0.00 0.00 38.58 3.51
127 128 2.434359 CGTCCTCCGTGGGCTTTC 60.434 66.667 0.00 0.00 38.58 2.62
128 129 2.747686 GTCCTCCGTGGGCTTTCA 59.252 61.111 0.00 0.00 37.49 2.69
129 130 1.376037 GTCCTCCGTGGGCTTTCAG 60.376 63.158 0.00 0.00 37.49 3.02
130 131 1.841556 TCCTCCGTGGGCTTTCAGT 60.842 57.895 0.00 0.00 36.20 3.41
131 132 1.073199 CCTCCGTGGGCTTTCAGTT 59.927 57.895 0.00 0.00 0.00 3.16
132 133 0.955919 CCTCCGTGGGCTTTCAGTTC 60.956 60.000 0.00 0.00 0.00 3.01
133 134 1.291877 CTCCGTGGGCTTTCAGTTCG 61.292 60.000 0.00 0.00 0.00 3.95
134 135 1.301401 CCGTGGGCTTTCAGTTCGA 60.301 57.895 0.00 0.00 0.00 3.71
135 136 1.566018 CCGTGGGCTTTCAGTTCGAC 61.566 60.000 0.00 0.00 0.00 4.20
136 137 1.860078 GTGGGCTTTCAGTTCGACG 59.140 57.895 0.00 0.00 0.00 5.12
137 138 1.959226 TGGGCTTTCAGTTCGACGC 60.959 57.895 0.00 0.00 0.00 5.19
138 139 1.959226 GGGCTTTCAGTTCGACGCA 60.959 57.895 0.00 0.00 0.00 5.24
139 140 1.493311 GGCTTTCAGTTCGACGCAG 59.507 57.895 0.00 0.00 0.00 5.18
140 141 0.944311 GGCTTTCAGTTCGACGCAGA 60.944 55.000 0.00 0.00 0.00 4.26
141 142 0.161870 GCTTTCAGTTCGACGCAGAC 59.838 55.000 0.00 0.00 0.00 3.51
143 144 0.937699 TTTCAGTTCGACGCAGACGG 60.938 55.000 0.00 0.00 46.86 4.79
144 145 3.470567 CAGTTCGACGCAGACGGC 61.471 66.667 0.00 0.00 46.86 5.68
162 163 4.394712 GTCGTGGGGTGGGAGCAG 62.395 72.222 0.00 0.00 0.00 4.24
186 187 3.491208 GCATGAGCTGAGGTTGGAT 57.509 52.632 0.00 0.00 37.91 3.41
187 188 1.307097 GCATGAGCTGAGGTTGGATC 58.693 55.000 0.00 0.00 37.91 3.36
188 189 1.134159 GCATGAGCTGAGGTTGGATCT 60.134 52.381 0.00 0.00 37.91 2.75
189 190 2.683152 GCATGAGCTGAGGTTGGATCTT 60.683 50.000 0.00 0.00 37.91 2.40
190 191 3.204526 CATGAGCTGAGGTTGGATCTTC 58.795 50.000 0.00 0.00 0.00 2.87
191 192 1.205655 TGAGCTGAGGTTGGATCTTCG 59.794 52.381 0.00 0.00 0.00 3.79
192 193 0.539051 AGCTGAGGTTGGATCTTCGG 59.461 55.000 0.00 0.00 0.00 4.30
193 194 0.462759 GCTGAGGTTGGATCTTCGGG 60.463 60.000 0.00 0.00 0.00 5.14
194 195 0.179000 CTGAGGTTGGATCTTCGGGG 59.821 60.000 0.00 0.00 0.00 5.73
195 196 1.271840 TGAGGTTGGATCTTCGGGGG 61.272 60.000 0.00 0.00 0.00 5.40
211 212 3.171388 GGGCTGGGATGGACGGAT 61.171 66.667 0.00 0.00 0.00 4.18
212 213 2.427753 GGCTGGGATGGACGGATC 59.572 66.667 0.00 0.00 0.00 3.36
213 214 2.029666 GCTGGGATGGACGGATCG 59.970 66.667 0.00 0.00 0.00 3.69
214 215 2.498941 GCTGGGATGGACGGATCGA 61.499 63.158 0.00 0.00 0.00 3.59
215 216 2.028125 GCTGGGATGGACGGATCGAA 62.028 60.000 0.00 0.00 0.00 3.71
216 217 0.032678 CTGGGATGGACGGATCGAAG 59.967 60.000 0.00 0.00 0.00 3.79
217 218 1.301009 GGGATGGACGGATCGAAGC 60.301 63.158 0.00 0.00 0.00 3.86
218 219 1.661821 GGATGGACGGATCGAAGCG 60.662 63.158 0.00 0.00 0.00 4.68
219 220 1.359117 GATGGACGGATCGAAGCGA 59.641 57.895 0.00 0.00 41.13 4.93
220 221 0.661780 GATGGACGGATCGAAGCGAG 60.662 60.000 0.00 0.00 39.91 5.03
221 222 2.026301 GGACGGATCGAAGCGAGG 59.974 66.667 0.00 0.00 39.91 4.63
222 223 2.478890 GGACGGATCGAAGCGAGGA 61.479 63.158 0.00 0.00 39.91 3.71
223 224 1.009449 GACGGATCGAAGCGAGGAG 60.009 63.158 0.00 0.00 39.91 3.69
224 225 2.333225 CGGATCGAAGCGAGGAGG 59.667 66.667 0.00 0.00 39.91 4.30
225 226 2.731374 GGATCGAAGCGAGGAGGG 59.269 66.667 0.00 0.00 39.91 4.30
226 227 2.128507 GGATCGAAGCGAGGAGGGT 61.129 63.158 0.00 0.00 39.91 4.34
227 228 1.360911 GATCGAAGCGAGGAGGGTC 59.639 63.158 0.00 0.00 39.91 4.46
228 229 2.077821 GATCGAAGCGAGGAGGGTCC 62.078 65.000 0.00 0.00 39.91 4.46
236 237 2.367378 AGGAGGGTCCTTACCGGG 59.633 66.667 6.32 0.00 46.91 5.73
237 238 2.251386 AGGAGGGTCCTTACCGGGA 61.251 63.158 6.32 0.00 46.91 5.14
238 239 1.600763 AGGAGGGTCCTTACCGGGAT 61.601 60.000 6.32 0.00 46.91 3.85
239 240 3.518165 AGGAGGGTCCTTACCGGGATC 62.518 61.905 6.32 0.00 46.91 3.36
242 243 2.039509 GGTCCTTACCGGGATCTCG 58.960 63.158 8.39 8.39 37.73 4.04
243 244 1.363080 GTCCTTACCGGGATCTCGC 59.637 63.158 10.23 0.00 37.73 5.03
244 245 1.076559 TCCTTACCGGGATCTCGCA 60.077 57.895 10.23 0.00 0.00 5.10
245 246 1.067582 CCTTACCGGGATCTCGCAC 59.932 63.158 10.23 0.00 0.00 5.34
246 247 1.299165 CTTACCGGGATCTCGCACG 60.299 63.158 10.23 0.00 0.00 5.34
249 250 4.873129 CCGGGATCTCGCACGGTG 62.873 72.222 10.23 3.15 41.34 4.94
264 265 3.499737 GTGCCGCGGACCATTCAG 61.500 66.667 33.48 0.00 0.00 3.02
265 266 4.015406 TGCCGCGGACCATTCAGT 62.015 61.111 33.48 0.00 0.00 3.41
266 267 3.499737 GCCGCGGACCATTCAGTG 61.500 66.667 33.48 0.00 0.00 3.66
274 275 4.023137 CCATTCAGTGGCCCTTGG 57.977 61.111 0.00 0.00 42.12 3.61
275 276 1.383799 CCATTCAGTGGCCCTTGGA 59.616 57.895 0.00 0.00 42.12 3.53
276 277 0.682209 CCATTCAGTGGCCCTTGGAG 60.682 60.000 0.00 0.00 42.12 3.86
277 278 0.329261 CATTCAGTGGCCCTTGGAGA 59.671 55.000 0.00 0.00 0.00 3.71
278 279 0.622665 ATTCAGTGGCCCTTGGAGAG 59.377 55.000 0.00 0.00 0.00 3.20
279 280 1.492133 TTCAGTGGCCCTTGGAGAGG 61.492 60.000 0.00 0.00 45.86 3.69
289 290 1.566211 CTTGGAGAGGAGGAGCTTGA 58.434 55.000 0.00 0.00 0.00 3.02
290 291 2.117865 CTTGGAGAGGAGGAGCTTGAT 58.882 52.381 0.00 0.00 0.00 2.57
291 292 1.493861 TGGAGAGGAGGAGCTTGATG 58.506 55.000 0.00 0.00 0.00 3.07
292 293 1.007600 TGGAGAGGAGGAGCTTGATGA 59.992 52.381 0.00 0.00 0.00 2.92
293 294 1.688197 GGAGAGGAGGAGCTTGATGAG 59.312 57.143 0.00 0.00 0.00 2.90
301 302 3.805267 GCTTGATGAGCCACGAGG 58.195 61.111 0.00 0.00 46.01 4.63
336 337 3.406361 CTGGTCACGCACACGCTC 61.406 66.667 0.00 0.00 45.53 5.03
337 338 3.848347 CTGGTCACGCACACGCTCT 62.848 63.158 0.00 0.00 45.53 4.09
338 339 2.661866 GGTCACGCACACGCTCTT 60.662 61.111 0.00 0.00 45.53 2.85
339 340 2.658707 GGTCACGCACACGCTCTTC 61.659 63.158 0.00 0.00 45.53 2.87
340 341 2.355837 TCACGCACACGCTCTTCC 60.356 61.111 0.00 0.00 45.53 3.46
341 342 2.356313 CACGCACACGCTCTTCCT 60.356 61.111 0.00 0.00 45.53 3.36
342 343 1.080772 CACGCACACGCTCTTCCTA 60.081 57.895 0.00 0.00 45.53 2.94
343 344 1.073216 CACGCACACGCTCTTCCTAG 61.073 60.000 0.00 0.00 45.53 3.02
344 345 2.161486 CGCACACGCTCTTCCTAGC 61.161 63.158 0.00 0.00 39.21 3.42
345 346 1.811679 GCACACGCTCTTCCTAGCC 60.812 63.158 0.00 0.00 39.43 3.93
346 347 1.517257 CACACGCTCTTCCTAGCCG 60.517 63.158 0.00 0.00 39.43 5.52
347 348 2.583593 CACGCTCTTCCTAGCCGC 60.584 66.667 0.00 0.00 39.43 6.53
348 349 3.839432 ACGCTCTTCCTAGCCGCC 61.839 66.667 0.00 0.00 39.43 6.13
349 350 4.933064 CGCTCTTCCTAGCCGCCG 62.933 72.222 0.00 0.00 39.43 6.46
351 352 4.593864 CTCTTCCTAGCCGCCGCC 62.594 72.222 0.00 0.00 34.57 6.13
353 354 4.593864 CTTCCTAGCCGCCGCCTC 62.594 72.222 0.00 0.00 34.57 4.70
356 357 4.976925 CCTAGCCGCCGCCTCATG 62.977 72.222 0.00 0.00 34.57 3.07
357 358 4.227134 CTAGCCGCCGCCTCATGT 62.227 66.667 0.00 0.00 34.57 3.21
358 359 4.529219 TAGCCGCCGCCTCATGTG 62.529 66.667 0.00 0.00 34.57 3.21
364 365 2.584064 CCGCCTCATGTGCTGGTA 59.416 61.111 8.05 0.00 0.00 3.25
365 366 1.078497 CCGCCTCATGTGCTGGTAA 60.078 57.895 8.05 0.00 0.00 2.85
366 367 0.676466 CCGCCTCATGTGCTGGTAAA 60.676 55.000 8.05 0.00 0.00 2.01
367 368 1.164411 CGCCTCATGTGCTGGTAAAA 58.836 50.000 8.05 0.00 0.00 1.52
368 369 1.539388 CGCCTCATGTGCTGGTAAAAA 59.461 47.619 8.05 0.00 0.00 1.94
386 387 3.848272 AAAAATCGTTGGATCATGCGT 57.152 38.095 0.00 0.00 30.81 5.24
387 388 3.848272 AAAATCGTTGGATCATGCGTT 57.152 38.095 0.00 0.00 30.81 4.84
388 389 2.830772 AATCGTTGGATCATGCGTTG 57.169 45.000 0.00 0.00 30.81 4.10
389 390 0.378257 ATCGTTGGATCATGCGTTGC 59.622 50.000 0.00 0.00 0.00 4.17
390 391 1.226379 CGTTGGATCATGCGTTGCC 60.226 57.895 0.00 0.00 0.00 4.52
391 392 1.647545 CGTTGGATCATGCGTTGCCT 61.648 55.000 0.00 0.00 0.00 4.75
392 393 0.099436 GTTGGATCATGCGTTGCCTC 59.901 55.000 0.00 0.00 0.00 4.70
393 394 1.031571 TTGGATCATGCGTTGCCTCC 61.032 55.000 0.00 0.00 0.00 4.30
394 395 2.537560 GGATCATGCGTTGCCTCCG 61.538 63.158 0.00 0.00 0.00 4.63
395 396 1.815421 GATCATGCGTTGCCTCCGT 60.815 57.895 0.00 0.00 0.00 4.69
396 397 2.040213 GATCATGCGTTGCCTCCGTG 62.040 60.000 0.00 0.00 0.00 4.94
397 398 2.520465 ATCATGCGTTGCCTCCGTGA 62.520 55.000 0.00 0.00 0.00 4.35
398 399 2.434884 ATGCGTTGCCTCCGTGAG 60.435 61.111 0.00 0.00 0.00 3.51
399 400 3.240134 ATGCGTTGCCTCCGTGAGT 62.240 57.895 1.12 0.00 0.00 3.41
400 401 2.665185 GCGTTGCCTCCGTGAGTT 60.665 61.111 1.12 0.00 0.00 3.01
401 402 2.251642 GCGTTGCCTCCGTGAGTTT 61.252 57.895 1.12 0.00 0.00 2.66
402 403 1.782028 GCGTTGCCTCCGTGAGTTTT 61.782 55.000 1.12 0.00 0.00 2.43
403 404 0.041312 CGTTGCCTCCGTGAGTTTTG 60.041 55.000 1.12 0.00 0.00 2.44
404 405 0.317854 GTTGCCTCCGTGAGTTTTGC 60.318 55.000 1.12 0.00 0.00 3.68
405 406 1.781025 TTGCCTCCGTGAGTTTTGCG 61.781 55.000 1.12 0.00 0.00 4.85
406 407 2.556287 CCTCCGTGAGTTTTGCGC 59.444 61.111 0.00 0.00 0.00 6.09
407 408 2.170985 CTCCGTGAGTTTTGCGCG 59.829 61.111 0.00 0.00 38.84 6.86
408 409 2.586635 TCCGTGAGTTTTGCGCGT 60.587 55.556 8.43 0.00 37.54 6.01
409 410 2.127758 CCGTGAGTTTTGCGCGTC 60.128 61.111 8.43 0.00 37.54 5.19
410 411 2.594962 CCGTGAGTTTTGCGCGTCT 61.595 57.895 8.43 0.00 37.54 4.18
411 412 1.437089 CGTGAGTTTTGCGCGTCTG 60.437 57.895 8.43 0.00 34.81 3.51
412 413 1.722507 GTGAGTTTTGCGCGTCTGC 60.723 57.895 8.43 0.00 37.91 4.26
423 424 2.202797 CGTCTGCGCATGCTACCT 60.203 61.111 12.24 0.00 43.34 3.08
424 425 2.520039 CGTCTGCGCATGCTACCTG 61.520 63.158 12.24 8.09 43.34 4.00
425 426 1.153568 GTCTGCGCATGCTACCTGA 60.154 57.895 12.24 10.22 43.34 3.86
426 427 1.153568 TCTGCGCATGCTACCTGAC 60.154 57.895 12.24 0.00 43.34 3.51
427 428 1.448365 CTGCGCATGCTACCTGACA 60.448 57.895 12.24 1.68 43.34 3.58
428 429 1.699656 CTGCGCATGCTACCTGACAC 61.700 60.000 12.24 0.00 43.34 3.67
429 430 2.802667 GCGCATGCTACCTGACACG 61.803 63.158 17.13 0.00 38.39 4.49
430 431 1.153842 CGCATGCTACCTGACACGA 60.154 57.895 17.13 0.00 0.00 4.35
431 432 1.413767 CGCATGCTACCTGACACGAC 61.414 60.000 17.13 0.00 0.00 4.34
432 433 1.413767 GCATGCTACCTGACACGACG 61.414 60.000 11.37 0.00 0.00 5.12
433 434 1.153823 ATGCTACCTGACACGACGC 60.154 57.895 0.00 0.00 0.00 5.19
434 435 1.873270 ATGCTACCTGACACGACGCA 61.873 55.000 0.00 0.00 0.00 5.24
435 436 1.153823 GCTACCTGACACGACGCAT 60.154 57.895 0.00 0.00 0.00 4.73
436 437 0.099968 GCTACCTGACACGACGCATA 59.900 55.000 0.00 0.00 0.00 3.14
437 438 1.269102 GCTACCTGACACGACGCATAT 60.269 52.381 0.00 0.00 0.00 1.78
438 439 2.798499 GCTACCTGACACGACGCATATT 60.798 50.000 0.00 0.00 0.00 1.28
439 440 2.380084 ACCTGACACGACGCATATTT 57.620 45.000 0.00 0.00 0.00 1.40
440 441 2.695359 ACCTGACACGACGCATATTTT 58.305 42.857 0.00 0.00 0.00 1.82
441 442 2.671396 ACCTGACACGACGCATATTTTC 59.329 45.455 0.00 0.00 0.00 2.29
442 443 2.930040 CCTGACACGACGCATATTTTCT 59.070 45.455 0.00 0.00 0.00 2.52
443 444 3.242091 CCTGACACGACGCATATTTTCTG 60.242 47.826 0.00 0.00 0.00 3.02
444 445 2.670905 TGACACGACGCATATTTTCTGG 59.329 45.455 0.00 0.00 0.00 3.86
445 446 2.671396 GACACGACGCATATTTTCTGGT 59.329 45.455 0.00 0.00 0.00 4.00
446 447 3.071479 ACACGACGCATATTTTCTGGTT 58.929 40.909 0.00 0.00 0.00 3.67
447 448 3.120338 ACACGACGCATATTTTCTGGTTG 60.120 43.478 0.00 0.00 0.00 3.77
448 449 3.124466 CACGACGCATATTTTCTGGTTGA 59.876 43.478 0.00 0.00 0.00 3.18
449 450 3.124636 ACGACGCATATTTTCTGGTTGAC 59.875 43.478 0.00 0.00 0.00 3.18
450 451 3.670203 GACGCATATTTTCTGGTTGACG 58.330 45.455 0.00 0.00 0.00 4.35
451 452 2.159572 ACGCATATTTTCTGGTTGACGC 60.160 45.455 0.00 0.00 0.00 5.19
452 453 2.440501 GCATATTTTCTGGTTGACGCG 58.559 47.619 3.53 3.53 0.00 6.01
453 454 2.440501 CATATTTTCTGGTTGACGCGC 58.559 47.619 5.73 0.00 0.00 6.86
454 455 0.440758 TATTTTCTGGTTGACGCGCG 59.559 50.000 30.96 30.96 0.00 6.86
455 456 2.780149 ATTTTCTGGTTGACGCGCGC 62.780 55.000 32.58 23.91 0.00 6.86
458 459 4.088762 CTGGTTGACGCGCGCATT 62.089 61.111 32.58 17.89 0.00 3.56
459 460 2.735677 CTGGTTGACGCGCGCATTA 61.736 57.895 32.58 10.59 0.00 1.90
460 461 2.234271 CTGGTTGACGCGCGCATTAA 62.234 55.000 32.58 17.41 0.00 1.40
461 462 1.061887 GGTTGACGCGCGCATTAAT 59.938 52.632 32.58 9.39 0.00 1.40
462 463 0.923911 GGTTGACGCGCGCATTAATC 60.924 55.000 32.58 16.52 0.00 1.75
463 464 1.012780 TTGACGCGCGCATTAATCG 60.013 52.632 32.58 15.32 0.00 3.34
464 465 2.128128 GACGCGCGCATTAATCGG 60.128 61.111 32.58 14.51 0.00 4.18
465 466 4.293626 ACGCGCGCATTAATCGGC 62.294 61.111 32.58 0.00 0.00 5.54
468 469 4.368808 CGCGCATTAATCGGCCGG 62.369 66.667 27.83 9.14 0.00 6.13
469 470 4.683334 GCGCATTAATCGGCCGGC 62.683 66.667 27.83 21.18 0.00 6.13
470 471 4.368808 CGCATTAATCGGCCGGCG 62.369 66.667 27.83 26.33 38.45 6.46
471 472 2.970324 GCATTAATCGGCCGGCGA 60.970 61.111 27.83 20.18 0.00 5.54
472 473 2.325082 GCATTAATCGGCCGGCGAT 61.325 57.895 27.83 22.97 0.00 4.58
473 474 1.017177 GCATTAATCGGCCGGCGATA 61.017 55.000 27.78 15.33 0.00 2.92
474 475 0.719465 CATTAATCGGCCGGCGATAC 59.281 55.000 27.78 11.60 0.00 2.24
475 476 0.319083 ATTAATCGGCCGGCGATACA 59.681 50.000 27.78 18.16 0.00 2.29
476 477 0.319083 TTAATCGGCCGGCGATACAT 59.681 50.000 27.78 16.20 0.00 2.29
477 478 0.319083 TAATCGGCCGGCGATACATT 59.681 50.000 27.78 17.67 0.00 2.71
478 479 1.227999 AATCGGCCGGCGATACATTG 61.228 55.000 27.78 8.67 0.00 2.82
479 480 2.094757 ATCGGCCGGCGATACATTGA 62.095 55.000 26.63 12.22 0.00 2.57
480 481 1.667830 CGGCCGGCGATACATTGAT 60.668 57.895 22.54 0.00 0.00 2.57
481 482 1.626654 CGGCCGGCGATACATTGATC 61.627 60.000 22.54 0.00 0.00 2.92
482 483 1.298859 GGCCGGCGATACATTGATCC 61.299 60.000 22.54 0.00 0.00 3.36
483 484 0.320771 GCCGGCGATACATTGATCCT 60.321 55.000 12.58 0.00 0.00 3.24
484 485 1.067142 GCCGGCGATACATTGATCCTA 60.067 52.381 12.58 0.00 0.00 2.94
485 486 2.607187 CCGGCGATACATTGATCCTAC 58.393 52.381 9.30 0.00 0.00 3.18
486 487 2.251040 CGGCGATACATTGATCCTACG 58.749 52.381 0.00 0.00 0.00 3.51
487 488 2.351447 CGGCGATACATTGATCCTACGT 60.351 50.000 0.00 0.00 0.00 3.57
488 489 3.650139 GGCGATACATTGATCCTACGTT 58.350 45.455 0.00 0.00 0.00 3.99
489 490 3.428870 GGCGATACATTGATCCTACGTTG 59.571 47.826 0.00 0.00 0.00 4.10
490 491 4.295870 GCGATACATTGATCCTACGTTGA 58.704 43.478 0.00 0.00 0.00 3.18
491 492 4.148348 GCGATACATTGATCCTACGTTGAC 59.852 45.833 0.00 0.00 0.00 3.18
492 493 4.378910 CGATACATTGATCCTACGTTGACG 59.621 45.833 0.00 1.41 46.33 4.35
504 505 1.733706 CGTTGACGTATGCATGCATG 58.266 50.000 37.43 25.90 37.82 4.06
505 506 2.176460 CGTTGACGTATGCATGCATGC 61.176 52.381 38.71 38.71 43.34 4.06
518 519 4.657077 CATGCAATGTGCTCGACG 57.343 55.556 0.00 0.00 45.31 5.12
519 520 1.581912 CATGCAATGTGCTCGACGC 60.582 57.895 0.00 0.58 45.31 5.19
520 521 3.087273 ATGCAATGTGCTCGACGCG 62.087 57.895 3.53 3.53 45.31 6.01
542 543 4.154347 CCAGACGGGGCAGCTCTC 62.154 72.222 0.00 0.00 0.00 3.20
543 544 4.504916 CAGACGGGGCAGCTCTCG 62.505 72.222 0.00 0.00 0.00 4.04
554 555 2.278271 GCTCTCGGCTCAGCGTAC 60.278 66.667 0.00 0.00 38.06 3.67
555 556 2.409651 CTCTCGGCTCAGCGTACC 59.590 66.667 0.00 0.00 0.00 3.34
556 557 2.360726 TCTCGGCTCAGCGTACCA 60.361 61.111 0.00 0.00 0.00 3.25
557 558 2.103143 CTCGGCTCAGCGTACCAG 59.897 66.667 0.00 0.00 0.00 4.00
558 559 2.360726 TCGGCTCAGCGTACCAGA 60.361 61.111 0.00 0.00 0.00 3.86
559 560 1.729470 CTCGGCTCAGCGTACCAGAT 61.729 60.000 0.00 0.00 0.00 2.90
560 561 1.141881 CGGCTCAGCGTACCAGATT 59.858 57.895 0.00 0.00 0.00 2.40
561 562 0.460284 CGGCTCAGCGTACCAGATTT 60.460 55.000 0.00 0.00 0.00 2.17
562 563 1.739067 GGCTCAGCGTACCAGATTTT 58.261 50.000 0.00 0.00 0.00 1.82
563 564 1.666189 GGCTCAGCGTACCAGATTTTC 59.334 52.381 0.00 0.00 0.00 2.29
564 565 2.622436 GCTCAGCGTACCAGATTTTCT 58.378 47.619 0.00 0.00 0.00 2.52
565 566 3.003480 GCTCAGCGTACCAGATTTTCTT 58.997 45.455 0.00 0.00 0.00 2.52
566 567 3.437049 GCTCAGCGTACCAGATTTTCTTT 59.563 43.478 0.00 0.00 0.00 2.52
567 568 4.436183 GCTCAGCGTACCAGATTTTCTTTC 60.436 45.833 0.00 0.00 0.00 2.62
568 569 3.678072 TCAGCGTACCAGATTTTCTTTCG 59.322 43.478 0.00 0.00 0.00 3.46
569 570 3.678072 CAGCGTACCAGATTTTCTTTCGA 59.322 43.478 0.00 0.00 0.00 3.71
570 571 3.927142 AGCGTACCAGATTTTCTTTCGAG 59.073 43.478 0.00 0.00 0.00 4.04
571 572 3.483738 GCGTACCAGATTTTCTTTCGAGC 60.484 47.826 0.00 0.00 0.00 5.03
572 573 3.241678 CGTACCAGATTTTCTTTCGAGCG 60.242 47.826 0.00 0.00 0.00 5.03
573 574 1.464997 ACCAGATTTTCTTTCGAGCGC 59.535 47.619 0.00 0.00 0.00 5.92
574 575 1.202076 CCAGATTTTCTTTCGAGCGCC 60.202 52.381 2.29 0.00 0.00 6.53
575 576 1.464608 CAGATTTTCTTTCGAGCGCCA 59.535 47.619 2.29 0.00 0.00 5.69
576 577 2.095768 CAGATTTTCTTTCGAGCGCCAA 60.096 45.455 2.29 0.00 0.00 4.52
577 578 2.552315 AGATTTTCTTTCGAGCGCCAAA 59.448 40.909 2.29 0.00 0.00 3.28
578 579 2.853731 TTTTCTTTCGAGCGCCAAAA 57.146 40.000 2.29 1.07 0.00 2.44
579 580 2.399396 TTTCTTTCGAGCGCCAAAAG 57.601 45.000 16.44 16.44 0.00 2.27
580 581 1.305201 TTCTTTCGAGCGCCAAAAGT 58.695 45.000 19.83 0.00 32.94 2.66
581 582 0.586319 TCTTTCGAGCGCCAAAAGTG 59.414 50.000 19.83 4.11 32.94 3.16
582 583 0.307760 CTTTCGAGCGCCAAAAGTGT 59.692 50.000 2.29 0.00 0.00 3.55
583 584 1.529438 CTTTCGAGCGCCAAAAGTGTA 59.471 47.619 2.29 0.00 0.00 2.90
584 585 0.863144 TTCGAGCGCCAAAAGTGTAC 59.137 50.000 2.29 0.00 0.00 2.90
585 586 0.947180 TCGAGCGCCAAAAGTGTACC 60.947 55.000 2.29 0.00 0.00 3.34
586 587 1.495951 GAGCGCCAAAAGTGTACCG 59.504 57.895 2.29 0.00 0.00 4.02
587 588 1.226030 GAGCGCCAAAAGTGTACCGT 61.226 55.000 2.29 0.00 0.00 4.83
588 589 1.082366 GCGCCAAAAGTGTACCGTG 60.082 57.895 0.00 0.00 0.00 4.94
589 590 1.778027 GCGCCAAAAGTGTACCGTGT 61.778 55.000 0.00 0.00 0.00 4.49
590 591 0.658897 CGCCAAAAGTGTACCGTGTT 59.341 50.000 0.00 0.00 0.00 3.32
591 592 1.064357 CGCCAAAAGTGTACCGTGTTT 59.936 47.619 0.00 0.00 0.00 2.83
592 593 2.478200 CGCCAAAAGTGTACCGTGTTTT 60.478 45.455 0.00 0.00 0.00 2.43
593 594 3.513662 GCCAAAAGTGTACCGTGTTTTT 58.486 40.909 0.00 0.00 0.00 1.94
594 595 4.670347 GCCAAAAGTGTACCGTGTTTTTA 58.330 39.130 0.00 0.00 0.00 1.52
595 596 4.736307 GCCAAAAGTGTACCGTGTTTTTAG 59.264 41.667 0.00 0.00 0.00 1.85
596 597 5.448904 GCCAAAAGTGTACCGTGTTTTTAGA 60.449 40.000 0.00 0.00 0.00 2.10
597 598 6.196571 CCAAAAGTGTACCGTGTTTTTAGAG 58.803 40.000 0.00 0.00 0.00 2.43
598 599 6.037391 CCAAAAGTGTACCGTGTTTTTAGAGA 59.963 38.462 0.00 0.00 0.00 3.10
599 600 7.414319 CCAAAAGTGTACCGTGTTTTTAGAGAA 60.414 37.037 0.00 0.00 0.00 2.87
600 601 6.839820 AAGTGTACCGTGTTTTTAGAGAAG 57.160 37.500 0.00 0.00 0.00 2.85
601 602 6.152932 AGTGTACCGTGTTTTTAGAGAAGA 57.847 37.500 0.00 0.00 0.00 2.87
602 603 6.576185 AGTGTACCGTGTTTTTAGAGAAGAA 58.424 36.000 0.00 0.00 0.00 2.52
603 604 7.043565 AGTGTACCGTGTTTTTAGAGAAGAAA 58.956 34.615 0.00 0.00 0.00 2.52
604 605 7.224167 AGTGTACCGTGTTTTTAGAGAAGAAAG 59.776 37.037 0.00 0.00 0.00 2.62
605 606 7.223387 GTGTACCGTGTTTTTAGAGAAGAAAGA 59.777 37.037 0.00 0.00 0.00 2.52
606 607 7.765360 TGTACCGTGTTTTTAGAGAAGAAAGAA 59.235 33.333 0.00 0.00 0.00 2.52
607 608 7.619964 ACCGTGTTTTTAGAGAAGAAAGAAA 57.380 32.000 0.00 0.00 0.00 2.52
608 609 8.221965 ACCGTGTTTTTAGAGAAGAAAGAAAT 57.778 30.769 0.00 0.00 0.00 2.17
609 610 9.333724 ACCGTGTTTTTAGAGAAGAAAGAAATA 57.666 29.630 0.00 0.00 0.00 1.40
630 631 9.469239 GAAATAAATTTTACAGAGACGTAACGG 57.531 33.333 0.00 0.00 31.19 4.44
631 632 8.761575 AATAAATTTTACAGAGACGTAACGGA 57.238 30.769 0.00 0.00 31.19 4.69
632 633 8.937634 ATAAATTTTACAGAGACGTAACGGAT 57.062 30.769 0.00 0.00 31.19 4.18
633 634 6.642683 AATTTTACAGAGACGTAACGGATG 57.357 37.500 0.00 0.00 31.19 3.51
634 635 4.771590 TTTACAGAGACGTAACGGATGT 57.228 40.909 0.00 0.00 31.19 3.06
635 636 2.631418 ACAGAGACGTAACGGATGTG 57.369 50.000 0.00 0.00 0.00 3.21
636 637 2.156917 ACAGAGACGTAACGGATGTGA 58.843 47.619 0.00 0.00 0.00 3.58
637 638 2.555325 ACAGAGACGTAACGGATGTGAA 59.445 45.455 0.00 0.00 0.00 3.18
638 639 3.192844 ACAGAGACGTAACGGATGTGAAT 59.807 43.478 0.00 0.00 0.00 2.57
639 640 4.397103 ACAGAGACGTAACGGATGTGAATA 59.603 41.667 0.00 0.00 0.00 1.75
640 641 5.067413 ACAGAGACGTAACGGATGTGAATAT 59.933 40.000 0.00 0.00 0.00 1.28
641 642 5.625721 CAGAGACGTAACGGATGTGAATATC 59.374 44.000 0.00 0.00 0.00 1.63
642 643 4.534168 AGACGTAACGGATGTGAATATCG 58.466 43.478 0.00 0.00 0.00 2.92
643 644 4.036027 AGACGTAACGGATGTGAATATCGT 59.964 41.667 0.00 0.00 0.00 3.73
644 645 4.285292 ACGTAACGGATGTGAATATCGTC 58.715 43.478 0.00 0.00 0.00 4.20
645 646 4.201940 ACGTAACGGATGTGAATATCGTCA 60.202 41.667 0.00 0.00 0.00 4.35
646 647 4.145928 CGTAACGGATGTGAATATCGTCAC 59.854 45.833 1.24 1.24 46.74 3.67
654 655 4.750172 GTGAATATCGTCACGGTTACAC 57.250 45.455 0.00 0.00 38.68 2.90
655 656 3.549070 GTGAATATCGTCACGGTTACACC 59.451 47.826 0.00 0.00 38.68 4.16
656 657 3.193056 TGAATATCGTCACGGTTACACCA 59.807 43.478 0.00 0.00 38.47 4.17
657 658 3.872511 ATATCGTCACGGTTACACCAA 57.127 42.857 0.00 0.00 38.47 3.67
658 659 1.787012 ATCGTCACGGTTACACCAAC 58.213 50.000 0.00 0.00 38.47 3.77
659 660 0.746063 TCGTCACGGTTACACCAACT 59.254 50.000 0.00 0.00 38.47 3.16
660 661 1.134226 CGTCACGGTTACACCAACTC 58.866 55.000 0.00 0.00 38.47 3.01
661 662 1.505425 GTCACGGTTACACCAACTCC 58.495 55.000 0.00 0.00 38.47 3.85
662 663 1.121378 TCACGGTTACACCAACTCCA 58.879 50.000 0.00 0.00 38.47 3.86
663 664 1.485480 TCACGGTTACACCAACTCCAA 59.515 47.619 0.00 0.00 38.47 3.53
664 665 1.600485 CACGGTTACACCAACTCCAAC 59.400 52.381 0.00 0.00 38.47 3.77
665 666 1.487558 ACGGTTACACCAACTCCAACT 59.512 47.619 0.00 0.00 38.47 3.16
666 667 1.871039 CGGTTACACCAACTCCAACTG 59.129 52.381 0.00 0.00 38.47 3.16
667 668 2.484065 CGGTTACACCAACTCCAACTGA 60.484 50.000 0.00 0.00 38.47 3.41
668 669 3.139077 GGTTACACCAACTCCAACTGAG 58.861 50.000 0.00 0.00 41.80 3.35
669 670 3.139077 GTTACACCAACTCCAACTGAGG 58.861 50.000 0.00 0.00 46.01 3.86
670 671 1.507140 ACACCAACTCCAACTGAGGA 58.493 50.000 0.00 0.00 46.01 3.71
671 672 1.843851 ACACCAACTCCAACTGAGGAA 59.156 47.619 0.00 0.00 46.01 3.36
672 673 2.241176 ACACCAACTCCAACTGAGGAAA 59.759 45.455 0.00 0.00 46.01 3.13
673 674 3.287222 CACCAACTCCAACTGAGGAAAA 58.713 45.455 0.00 0.00 46.01 2.29
674 675 3.699038 CACCAACTCCAACTGAGGAAAAA 59.301 43.478 0.00 0.00 46.01 1.94
726 730 2.039418 TGATGCACTAGATTAGCCGGT 58.961 47.619 1.90 0.00 0.00 5.28
728 732 2.606275 GCACTAGATTAGCCGGTGC 58.394 57.895 1.90 0.00 44.53 5.01
753 757 2.257691 TTTGGTCGACCCGATTGAAA 57.742 45.000 31.19 19.98 38.42 2.69
774 778 0.890683 CCCTCGCATTCCTTTGCTTT 59.109 50.000 0.00 0.00 40.54 3.51
865 870 2.757077 CCTTCCCCACCACTCCAC 59.243 66.667 0.00 0.00 0.00 4.02
952 957 4.688879 CACTTGCCTCGTAAAGACACATTA 59.311 41.667 0.00 0.00 0.00 1.90
963 968 4.644103 AAGACACATTATGCCAAGATGC 57.356 40.909 0.00 0.00 0.00 3.91
1005 1010 1.851021 GCAACACGTGTAGCATGCCA 61.851 55.000 25.51 2.78 0.00 4.92
1139 1144 0.823356 ATTTGGCTGTGGCAGAACGT 60.823 50.000 0.00 0.00 39.75 3.99
1163 1168 2.743718 CCCTGACACAGCCGACTT 59.256 61.111 0.00 0.00 0.00 3.01
1188 1193 3.496160 GGTGGACTTCATGGTGTAAGTGT 60.496 47.826 2.49 0.00 36.10 3.55
1234 1239 2.315176 CTGATCCTCCTCCGAGACATT 58.685 52.381 0.00 0.00 38.52 2.71
1265 1270 1.133025 GTTGCAATCGCCTGCTGTAAT 59.867 47.619 0.59 0.00 43.07 1.89
1266 1271 1.462616 TGCAATCGCCTGCTGTAATT 58.537 45.000 9.52 0.00 43.07 1.40
1267 1272 2.637947 TGCAATCGCCTGCTGTAATTA 58.362 42.857 9.52 0.00 43.07 1.40
1268 1273 2.354510 TGCAATCGCCTGCTGTAATTAC 59.645 45.455 8.75 8.75 43.07 1.89
1269 1274 2.287009 GCAATCGCCTGCTGTAATTACC 60.287 50.000 13.01 0.00 39.34 2.85
1270 1275 1.865865 ATCGCCTGCTGTAATTACCG 58.134 50.000 13.01 7.86 0.00 4.02
1271 1276 0.533491 TCGCCTGCTGTAATTACCGT 59.467 50.000 13.01 0.00 0.00 4.83
1272 1277 0.928229 CGCCTGCTGTAATTACCGTC 59.072 55.000 13.01 4.29 0.00 4.79
1273 1278 1.470979 CGCCTGCTGTAATTACCGTCT 60.471 52.381 13.01 0.00 0.00 4.18
1274 1279 1.933853 GCCTGCTGTAATTACCGTCTG 59.066 52.381 13.01 7.10 0.00 3.51
1275 1280 2.418197 GCCTGCTGTAATTACCGTCTGA 60.418 50.000 13.01 0.00 0.00 3.27
1276 1281 3.857052 CCTGCTGTAATTACCGTCTGAA 58.143 45.455 13.01 0.00 0.00 3.02
1277 1282 4.250464 CCTGCTGTAATTACCGTCTGAAA 58.750 43.478 13.01 0.00 0.00 2.69
1278 1283 4.693566 CCTGCTGTAATTACCGTCTGAAAA 59.306 41.667 13.01 0.00 0.00 2.29
1279 1284 5.180492 CCTGCTGTAATTACCGTCTGAAAAA 59.820 40.000 13.01 0.00 0.00 1.94
1300 1305 6.775594 AAAACTTCTTCCAAGCTTGTTAGT 57.224 33.333 24.35 15.55 0.00 2.24
1301 1306 5.757850 AACTTCTTCCAAGCTTGTTAGTG 57.242 39.130 24.35 17.44 0.00 2.74
1302 1307 4.781934 ACTTCTTCCAAGCTTGTTAGTGT 58.218 39.130 24.35 17.93 0.00 3.55
1303 1308 5.193679 ACTTCTTCCAAGCTTGTTAGTGTT 58.806 37.500 24.35 1.84 0.00 3.32
1304 1309 6.354130 ACTTCTTCCAAGCTTGTTAGTGTTA 58.646 36.000 24.35 3.43 0.00 2.41
1305 1310 6.483640 ACTTCTTCCAAGCTTGTTAGTGTTAG 59.516 38.462 24.35 16.39 0.00 2.34
1306 1311 6.169557 TCTTCCAAGCTTGTTAGTGTTAGA 57.830 37.500 24.35 8.73 0.00 2.10
1307 1312 6.769512 TCTTCCAAGCTTGTTAGTGTTAGAT 58.230 36.000 24.35 0.00 0.00 1.98
1308 1313 7.903145 TCTTCCAAGCTTGTTAGTGTTAGATA 58.097 34.615 24.35 1.19 0.00 1.98
1309 1314 8.540388 TCTTCCAAGCTTGTTAGTGTTAGATAT 58.460 33.333 24.35 0.00 0.00 1.63
1310 1315 9.817809 CTTCCAAGCTTGTTAGTGTTAGATATA 57.182 33.333 24.35 0.00 0.00 0.86
1311 1316 9.595823 TTCCAAGCTTGTTAGTGTTAGATATAC 57.404 33.333 24.35 0.00 0.00 1.47
1312 1317 8.202137 TCCAAGCTTGTTAGTGTTAGATATACC 58.798 37.037 24.35 0.00 0.00 2.73
1313 1318 7.985184 CCAAGCTTGTTAGTGTTAGATATACCA 59.015 37.037 24.35 0.00 0.00 3.25
1314 1319 9.378551 CAAGCTTGTTAGTGTTAGATATACCAA 57.621 33.333 18.65 0.00 0.00 3.67
1348 1353 3.622166 TTTTGGACGGAGGGAATACTC 57.378 47.619 0.00 0.00 36.76 2.59
1357 1362 3.564264 GGAGGGAATACTCCGTAAGACT 58.436 50.000 0.00 0.00 46.81 3.24
1358 1363 3.569277 GGAGGGAATACTCCGTAAGACTC 59.431 52.174 0.00 0.00 46.81 3.36
1359 1364 4.463070 GAGGGAATACTCCGTAAGACTCT 58.537 47.826 0.00 0.00 43.51 3.24
1360 1365 4.208746 AGGGAATACTCCGTAAGACTCTG 58.791 47.826 0.00 0.00 43.51 3.35
1361 1366 4.079901 AGGGAATACTCCGTAAGACTCTGA 60.080 45.833 0.00 0.00 43.51 3.27
1362 1367 4.276431 GGGAATACTCCGTAAGACTCTGAG 59.724 50.000 2.45 2.45 43.51 3.35
1363 1368 4.883006 GGAATACTCCGTAAGACTCTGAGT 59.117 45.833 10.66 10.66 39.47 3.41
1364 1369 5.007921 GGAATACTCCGTAAGACTCTGAGTC 59.992 48.000 26.43 26.43 37.47 3.36
1365 1370 2.713877 ACTCCGTAAGACTCTGAGTCC 58.286 52.381 29.07 15.99 46.18 3.85
1366 1371 2.040012 ACTCCGTAAGACTCTGAGTCCA 59.960 50.000 29.07 17.46 46.18 4.02
1367 1372 2.420722 CTCCGTAAGACTCTGAGTCCAC 59.579 54.545 29.07 24.80 46.18 4.02
1368 1373 2.160205 CCGTAAGACTCTGAGTCCACA 58.840 52.381 29.07 14.89 46.18 4.17
1369 1374 2.095161 CCGTAAGACTCTGAGTCCACAC 60.095 54.545 29.07 22.50 46.18 3.82
1370 1375 2.095161 CGTAAGACTCTGAGTCCACACC 60.095 54.545 29.07 14.62 46.18 4.16
1371 1376 0.962489 AAGACTCTGAGTCCACACCG 59.038 55.000 29.07 0.00 46.18 4.94
1372 1377 0.178987 AGACTCTGAGTCCACACCGT 60.179 55.000 29.07 10.36 46.18 4.83
1373 1378 0.674534 GACTCTGAGTCCACACCGTT 59.325 55.000 24.05 0.00 39.28 4.44
1374 1379 1.068741 GACTCTGAGTCCACACCGTTT 59.931 52.381 24.05 0.00 39.28 3.60
1375 1380 1.068741 ACTCTGAGTCCACACCGTTTC 59.931 52.381 4.06 0.00 0.00 2.78
1376 1381 0.391597 TCTGAGTCCACACCGTTTCC 59.608 55.000 0.00 0.00 0.00 3.13
1377 1382 0.105964 CTGAGTCCACACCGTTTCCA 59.894 55.000 0.00 0.00 0.00 3.53
1378 1383 0.542333 TGAGTCCACACCGTTTCCAA 59.458 50.000 0.00 0.00 0.00 3.53
1379 1384 1.065345 TGAGTCCACACCGTTTCCAAA 60.065 47.619 0.00 0.00 0.00 3.28
1380 1385 1.332686 GAGTCCACACCGTTTCCAAAC 59.667 52.381 0.00 0.00 35.59 2.93
1381 1386 0.382873 GTCCACACCGTTTCCAAACC 59.617 55.000 0.00 0.00 35.51 3.27
1382 1387 1.096386 TCCACACCGTTTCCAAACCG 61.096 55.000 0.00 0.00 35.51 4.44
1383 1388 1.357334 CACACCGTTTCCAAACCGG 59.643 57.895 0.00 0.00 38.03 5.28
1384 1389 1.077572 ACACCGTTTCCAAACCGGT 60.078 52.632 0.00 0.00 42.31 5.28
1385 1390 0.179936 ACACCGTTTCCAAACCGGTA 59.820 50.000 8.00 0.00 40.86 4.02
1386 1391 0.587768 CACCGTTTCCAAACCGGTAC 59.412 55.000 8.00 0.00 40.86 3.34
1449 1454 0.322187 CGTTTCCAAACCGGATCCCT 60.322 55.000 9.46 0.00 45.80 4.20
1462 1467 1.718280 GATCCCTATCCAACCGACCT 58.282 55.000 0.00 0.00 0.00 3.85
1463 1468 1.619332 GATCCCTATCCAACCGACCTC 59.381 57.143 0.00 0.00 0.00 3.85
1464 1469 0.754217 TCCCTATCCAACCGACCTCG 60.754 60.000 0.00 0.00 39.44 4.63
1465 1470 1.041447 CCCTATCCAACCGACCTCGT 61.041 60.000 0.00 0.00 37.74 4.18
1466 1471 0.822164 CCTATCCAACCGACCTCGTT 59.178 55.000 0.00 0.00 37.74 3.85
1467 1472 1.202382 CCTATCCAACCGACCTCGTTC 60.202 57.143 0.00 0.00 37.74 3.95
1468 1473 0.819582 TATCCAACCGACCTCGTTCC 59.180 55.000 0.00 0.00 37.74 3.62
1469 1474 1.189524 ATCCAACCGACCTCGTTCCA 61.190 55.000 0.00 0.00 37.74 3.53
1470 1475 1.070105 CCAACCGACCTCGTTCCAA 59.930 57.895 0.00 0.00 37.74 3.53
1471 1476 1.226030 CCAACCGACCTCGTTCCAAC 61.226 60.000 0.00 0.00 37.74 3.77
1472 1477 0.531090 CAACCGACCTCGTTCCAACA 60.531 55.000 0.00 0.00 37.74 3.33
1473 1478 0.178533 AACCGACCTCGTTCCAACAA 59.821 50.000 0.00 0.00 37.74 2.83
1474 1479 0.178533 ACCGACCTCGTTCCAACAAA 59.821 50.000 0.00 0.00 37.74 2.83
1475 1480 1.301423 CCGACCTCGTTCCAACAAAA 58.699 50.000 0.00 0.00 37.74 2.44
1476 1481 1.671845 CCGACCTCGTTCCAACAAAAA 59.328 47.619 0.00 0.00 37.74 1.94
1566 1571 1.849097 AAAACGATCGATCTACCGCC 58.151 50.000 24.34 0.00 0.00 6.13
1920 1952 0.990374 AGGAGAAGGTGAAGCTGCAT 59.010 50.000 0.00 0.00 0.00 3.96
2531 2572 0.322546 ACCGGTGGGAAAGCAAGATC 60.323 55.000 6.12 0.00 36.97 2.75
2556 2600 0.175989 GAAAGTCGGAAGGCGAGGAT 59.824 55.000 0.00 0.00 43.49 3.24
2649 2696 6.311055 GCTTATTATGAAGCCCTTCTGAAG 57.689 41.667 10.46 10.46 45.08 3.02
2652 2699 2.592102 ATGAAGCCCTTCTGAAGCAA 57.408 45.000 11.93 0.00 40.14 3.91
2682 2729 0.785708 GCGCGAATGTCAAACACGAG 60.786 55.000 12.10 0.00 0.00 4.18
2691 2738 1.521423 GTCAAACACGAGGACGAACAG 59.479 52.381 0.00 0.00 42.66 3.16
2692 2739 0.232303 CAAACACGAGGACGAACAGC 59.768 55.000 0.00 0.00 42.66 4.40
2701 2748 4.254709 ACGAACAGCAGCTGGGCA 62.255 61.111 26.38 0.00 35.51 5.36
2703 2750 2.595463 GAACAGCAGCTGGGCACA 60.595 61.111 26.38 0.00 35.51 4.57
2796 2843 0.622665 AAGCTGGGATTGAGTGGGAG 59.377 55.000 0.00 0.00 0.00 4.30
2846 2893 3.619233 TGGCGAAAACTAAAAGACAGC 57.381 42.857 0.00 0.00 0.00 4.40
2857 2907 0.593128 AAAGACAGCGGCAACATGAC 59.407 50.000 0.00 0.00 0.00 3.06
2872 2924 5.387342 GCAACATGACGAACAAATTTGCTAC 60.387 40.000 18.12 8.61 37.95 3.58
2873 2925 5.689383 ACATGACGAACAAATTTGCTACT 57.311 34.783 18.12 0.36 0.00 2.57
2874 2926 5.451908 ACATGACGAACAAATTTGCTACTG 58.548 37.500 18.12 9.03 0.00 2.74
2875 2927 5.008613 ACATGACGAACAAATTTGCTACTGT 59.991 36.000 18.12 9.54 0.00 3.55
2876 2928 6.203915 ACATGACGAACAAATTTGCTACTGTA 59.796 34.615 18.12 0.53 0.00 2.74
2877 2929 5.981174 TGACGAACAAATTTGCTACTGTAC 58.019 37.500 18.12 3.72 0.00 2.90
2878 2930 5.013861 ACGAACAAATTTGCTACTGTACG 57.986 39.130 18.12 13.07 0.00 3.67
2956 3008 3.364621 GCACAATTGTTATGGCAGAAACG 59.635 43.478 8.77 0.00 0.00 3.60
2963 3015 4.323417 TGTTATGGCAGAAACGTGAGAAT 58.677 39.130 0.00 0.00 0.00 2.40
2966 3018 6.428465 TGTTATGGCAGAAACGTGAGAATAAA 59.572 34.615 0.00 0.00 0.00 1.40
2967 3019 4.742438 TGGCAGAAACGTGAGAATAAAC 57.258 40.909 0.00 0.00 0.00 2.01
2968 3020 4.385825 TGGCAGAAACGTGAGAATAAACT 58.614 39.130 0.00 0.00 0.00 2.66
2969 3021 5.543714 TGGCAGAAACGTGAGAATAAACTA 58.456 37.500 0.00 0.00 0.00 2.24
3299 3615 3.419580 TCCATTGCATCCCCGGCT 61.420 61.111 0.00 0.00 0.00 5.52
3684 4009 1.274712 CTCCTGTTGCCTCTCCTCTT 58.725 55.000 0.00 0.00 0.00 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.105858 ACACTAGTAGGAAAAGGGGCTTTT 59.894 41.667 1.45 0.00 44.92 2.27
3 4 2.917205 ACACTAGTAGGAAAAGGGGCT 58.083 47.619 1.45 0.00 0.00 5.19
4 5 3.118482 GGTACACTAGTAGGAAAAGGGGC 60.118 52.174 1.45 0.00 0.00 5.80
5 6 4.359996 AGGTACACTAGTAGGAAAAGGGG 58.640 47.826 1.45 0.00 0.00 4.79
6 7 5.597594 CCTAGGTACACTAGTAGGAAAAGGG 59.402 48.000 0.00 0.00 46.39 3.95
7 8 6.096564 CACCTAGGTACACTAGTAGGAAAAGG 59.903 46.154 15.80 10.42 46.39 3.11
8 9 6.405619 GCACCTAGGTACACTAGTAGGAAAAG 60.406 46.154 15.80 0.00 46.39 2.27
9 10 5.420104 GCACCTAGGTACACTAGTAGGAAAA 59.580 44.000 15.80 0.00 46.39 2.29
10 11 4.952335 GCACCTAGGTACACTAGTAGGAAA 59.048 45.833 15.80 0.00 46.39 3.13
11 12 4.229123 AGCACCTAGGTACACTAGTAGGAA 59.771 45.833 15.80 0.00 46.39 3.36
12 13 3.784763 AGCACCTAGGTACACTAGTAGGA 59.215 47.826 15.80 0.00 46.39 2.94
13 14 4.136051 GAGCACCTAGGTACACTAGTAGG 58.864 52.174 15.80 5.70 46.39 3.18
14 15 4.817464 CAGAGCACCTAGGTACACTAGTAG 59.183 50.000 15.80 0.00 46.39 2.57
15 16 4.778579 CAGAGCACCTAGGTACACTAGTA 58.221 47.826 15.80 0.00 46.39 1.82
16 17 3.622630 CAGAGCACCTAGGTACACTAGT 58.377 50.000 15.80 1.12 46.39 2.57
17 18 4.186608 TGCAGAGCACCTAGGTACACTAG 61.187 52.174 15.80 8.97 40.44 2.57
18 19 2.291346 TGCAGAGCACCTAGGTACACTA 60.291 50.000 15.80 0.00 31.71 2.74
19 20 1.187087 GCAGAGCACCTAGGTACACT 58.813 55.000 15.80 10.46 0.00 3.55
20 21 0.895530 TGCAGAGCACCTAGGTACAC 59.104 55.000 15.80 7.90 31.71 2.90
21 22 1.186200 CTGCAGAGCACCTAGGTACA 58.814 55.000 15.80 5.52 33.79 2.90
22 23 1.475403 TCTGCAGAGCACCTAGGTAC 58.525 55.000 15.80 9.51 33.79 3.34
23 24 2.231716 TTCTGCAGAGCACCTAGGTA 57.768 50.000 15.80 0.00 33.79 3.08
24 25 1.002544 GTTTCTGCAGAGCACCTAGGT 59.997 52.381 17.43 9.21 33.79 3.08
25 26 1.277557 AGTTTCTGCAGAGCACCTAGG 59.722 52.381 17.43 7.41 33.79 3.02
26 27 2.615869 GAGTTTCTGCAGAGCACCTAG 58.384 52.381 17.43 0.00 33.79 3.02
27 28 1.276421 GGAGTTTCTGCAGAGCACCTA 59.724 52.381 17.43 0.00 33.79 3.08
28 29 0.036022 GGAGTTTCTGCAGAGCACCT 59.964 55.000 17.43 10.95 33.79 4.00
29 30 0.036022 AGGAGTTTCTGCAGAGCACC 59.964 55.000 17.43 19.58 33.79 5.01
30 31 1.803555 GAAGGAGTTTCTGCAGAGCAC 59.196 52.381 17.43 17.02 33.79 4.40
31 32 1.417517 TGAAGGAGTTTCTGCAGAGCA 59.582 47.619 17.43 4.97 36.71 4.26
32 33 2.175878 TGAAGGAGTTTCTGCAGAGC 57.824 50.000 17.43 13.77 36.71 4.09
33 34 5.472820 AGAATTTGAAGGAGTTTCTGCAGAG 59.527 40.000 17.43 0.00 36.71 3.35
34 35 5.380043 AGAATTTGAAGGAGTTTCTGCAGA 58.620 37.500 13.74 13.74 36.71 4.26
35 36 5.702349 AGAATTTGAAGGAGTTTCTGCAG 57.298 39.130 7.63 7.63 36.71 4.41
36 37 5.593909 TGAAGAATTTGAAGGAGTTTCTGCA 59.406 36.000 0.00 0.00 36.71 4.41
37 38 6.076981 TGAAGAATTTGAAGGAGTTTCTGC 57.923 37.500 0.00 0.00 36.71 4.26
38 39 7.269477 ACTGAAGAATTTGAAGGAGTTTCTG 57.731 36.000 0.00 0.00 36.71 3.02
39 40 7.201857 CCAACTGAAGAATTTGAAGGAGTTTCT 60.202 37.037 0.00 0.00 36.71 2.52
40 41 6.920210 CCAACTGAAGAATTTGAAGGAGTTTC 59.080 38.462 0.00 0.00 36.29 2.78
41 42 6.183360 CCCAACTGAAGAATTTGAAGGAGTTT 60.183 38.462 0.00 0.00 0.00 2.66
42 43 5.302823 CCCAACTGAAGAATTTGAAGGAGTT 59.697 40.000 0.00 0.00 0.00 3.01
43 44 4.829492 CCCAACTGAAGAATTTGAAGGAGT 59.171 41.667 0.00 0.00 0.00 3.85
44 45 4.219288 CCCCAACTGAAGAATTTGAAGGAG 59.781 45.833 0.00 0.00 0.00 3.69
45 46 4.141041 TCCCCAACTGAAGAATTTGAAGGA 60.141 41.667 0.00 0.00 0.00 3.36
46 47 4.151883 TCCCCAACTGAAGAATTTGAAGG 58.848 43.478 0.00 0.00 0.00 3.46
47 48 5.105595 GGATCCCCAACTGAAGAATTTGAAG 60.106 44.000 0.00 0.00 0.00 3.02
48 49 4.772100 GGATCCCCAACTGAAGAATTTGAA 59.228 41.667 0.00 0.00 0.00 2.69
49 50 4.202663 TGGATCCCCAACTGAAGAATTTGA 60.203 41.667 9.90 0.00 40.09 2.69
50 51 4.088634 TGGATCCCCAACTGAAGAATTTG 58.911 43.478 9.90 0.00 40.09 2.32
51 52 4.402616 TGGATCCCCAACTGAAGAATTT 57.597 40.909 9.90 0.00 40.09 1.82
52 53 4.402616 TTGGATCCCCAACTGAAGAATT 57.597 40.909 9.90 0.00 46.94 2.17
63 64 2.961531 TCGTTTTCTTTGGATCCCCA 57.038 45.000 9.90 0.00 41.64 4.96
64 65 2.688446 GGATCGTTTTCTTTGGATCCCC 59.312 50.000 9.90 0.00 45.93 4.81
67 68 5.355350 AGATGTGGATCGTTTTCTTTGGATC 59.645 40.000 0.00 0.00 35.65 3.36
68 69 5.256474 AGATGTGGATCGTTTTCTTTGGAT 58.744 37.500 0.00 0.00 33.34 3.41
69 70 4.651778 AGATGTGGATCGTTTTCTTTGGA 58.348 39.130 0.00 0.00 33.34 3.53
70 71 4.142600 GGAGATGTGGATCGTTTTCTTTGG 60.143 45.833 0.00 0.00 33.34 3.28
71 72 4.455533 TGGAGATGTGGATCGTTTTCTTTG 59.544 41.667 0.00 0.00 33.34 2.77
72 73 4.455877 GTGGAGATGTGGATCGTTTTCTTT 59.544 41.667 0.00 0.00 33.34 2.52
73 74 4.003648 GTGGAGATGTGGATCGTTTTCTT 58.996 43.478 0.00 0.00 33.34 2.52
74 75 3.600388 GTGGAGATGTGGATCGTTTTCT 58.400 45.455 0.00 0.00 33.34 2.52
75 76 2.678336 GGTGGAGATGTGGATCGTTTTC 59.322 50.000 0.00 0.00 33.34 2.29
76 77 2.618045 GGGTGGAGATGTGGATCGTTTT 60.618 50.000 0.00 0.00 33.34 2.43
77 78 1.065418 GGGTGGAGATGTGGATCGTTT 60.065 52.381 0.00 0.00 33.34 3.60
78 79 0.541863 GGGTGGAGATGTGGATCGTT 59.458 55.000 0.00 0.00 33.34 3.85
79 80 1.338136 GGGGTGGAGATGTGGATCGT 61.338 60.000 0.00 0.00 33.34 3.73
80 81 1.447643 GGGGTGGAGATGTGGATCG 59.552 63.158 0.00 0.00 33.34 3.69
81 82 1.048724 TCGGGGTGGAGATGTGGATC 61.049 60.000 0.00 0.00 0.00 3.36
82 83 1.002921 TCGGGGTGGAGATGTGGAT 59.997 57.895 0.00 0.00 0.00 3.41
83 84 1.987855 GTCGGGGTGGAGATGTGGA 60.988 63.158 0.00 0.00 0.00 4.02
84 85 2.584608 GTCGGGGTGGAGATGTGG 59.415 66.667 0.00 0.00 0.00 4.17
85 86 1.961180 GAGGTCGGGGTGGAGATGTG 61.961 65.000 0.00 0.00 0.00 3.21
86 87 1.686110 GAGGTCGGGGTGGAGATGT 60.686 63.158 0.00 0.00 0.00 3.06
87 88 2.786495 CGAGGTCGGGGTGGAGATG 61.786 68.421 0.00 0.00 35.37 2.90
88 89 2.442272 CGAGGTCGGGGTGGAGAT 60.442 66.667 0.00 0.00 35.37 2.75
89 90 3.933048 GACGAGGTCGGGGTGGAGA 62.933 68.421 4.13 0.00 44.95 3.71
90 91 3.450115 GACGAGGTCGGGGTGGAG 61.450 72.222 4.13 0.00 44.95 3.86
111 112 1.376037 CTGAAAGCCCACGGAGGAC 60.376 63.158 0.00 0.00 41.22 3.85
112 113 1.415672 AACTGAAAGCCCACGGAGGA 61.416 55.000 0.00 0.00 37.09 3.71
113 114 0.955919 GAACTGAAAGCCCACGGAGG 60.956 60.000 0.00 0.00 37.60 4.30
114 115 1.291877 CGAACTGAAAGCCCACGGAG 61.292 60.000 0.00 0.00 37.60 4.63
115 116 1.301401 CGAACTGAAAGCCCACGGA 60.301 57.895 0.00 0.00 37.60 4.69
116 117 1.301401 TCGAACTGAAAGCCCACGG 60.301 57.895 0.00 0.00 37.60 4.94
117 118 1.860078 GTCGAACTGAAAGCCCACG 59.140 57.895 0.00 0.00 37.60 4.94
118 119 1.860078 CGTCGAACTGAAAGCCCAC 59.140 57.895 0.00 0.00 37.60 4.61
119 120 1.959226 GCGTCGAACTGAAAGCCCA 60.959 57.895 0.00 0.00 37.60 5.36
120 121 1.901650 CTGCGTCGAACTGAAAGCCC 61.902 60.000 0.00 0.00 37.60 5.19
121 122 0.944311 TCTGCGTCGAACTGAAAGCC 60.944 55.000 0.00 0.00 37.60 4.35
122 123 0.161870 GTCTGCGTCGAACTGAAAGC 59.838 55.000 0.00 0.00 37.60 3.51
123 124 0.431233 CGTCTGCGTCGAACTGAAAG 59.569 55.000 0.00 0.00 42.29 2.62
124 125 0.937699 CCGTCTGCGTCGAACTGAAA 60.938 55.000 0.00 0.00 36.15 2.69
125 126 1.371267 CCGTCTGCGTCGAACTGAA 60.371 57.895 0.00 0.00 36.15 3.02
126 127 2.254350 CCGTCTGCGTCGAACTGA 59.746 61.111 0.00 0.00 36.15 3.41
127 128 3.470567 GCCGTCTGCGTCGAACTG 61.471 66.667 0.00 0.00 36.15 3.16
145 146 4.394712 CTGCTCCCACCCCACGAC 62.395 72.222 0.00 0.00 0.00 4.34
157 158 3.628193 CTCATGCTCGCGCTGCTC 61.628 66.667 20.75 1.96 36.97 4.26
168 169 1.134159 AGATCCAACCTCAGCTCATGC 60.134 52.381 0.00 0.00 40.05 4.06
169 170 3.204526 GAAGATCCAACCTCAGCTCATG 58.795 50.000 0.00 0.00 0.00 3.07
170 171 2.158986 CGAAGATCCAACCTCAGCTCAT 60.159 50.000 0.00 0.00 0.00 2.90
171 172 1.205655 CGAAGATCCAACCTCAGCTCA 59.794 52.381 0.00 0.00 0.00 4.26
172 173 1.472376 CCGAAGATCCAACCTCAGCTC 60.472 57.143 0.00 0.00 0.00 4.09
173 174 0.539051 CCGAAGATCCAACCTCAGCT 59.461 55.000 0.00 0.00 0.00 4.24
174 175 0.462759 CCCGAAGATCCAACCTCAGC 60.463 60.000 0.00 0.00 0.00 4.26
175 176 0.179000 CCCCGAAGATCCAACCTCAG 59.821 60.000 0.00 0.00 0.00 3.35
176 177 1.271840 CCCCCGAAGATCCAACCTCA 61.272 60.000 0.00 0.00 0.00 3.86
177 178 1.527370 CCCCCGAAGATCCAACCTC 59.473 63.158 0.00 0.00 0.00 3.85
178 179 3.741325 CCCCCGAAGATCCAACCT 58.259 61.111 0.00 0.00 0.00 3.50
194 195 3.171388 ATCCGTCCATCCCAGCCC 61.171 66.667 0.00 0.00 0.00 5.19
195 196 2.427753 GATCCGTCCATCCCAGCC 59.572 66.667 0.00 0.00 0.00 4.85
196 197 2.028125 TTCGATCCGTCCATCCCAGC 62.028 60.000 0.00 0.00 0.00 4.85
197 198 0.032678 CTTCGATCCGTCCATCCCAG 59.967 60.000 0.00 0.00 0.00 4.45
198 199 2.028125 GCTTCGATCCGTCCATCCCA 62.028 60.000 0.00 0.00 0.00 4.37
199 200 1.301009 GCTTCGATCCGTCCATCCC 60.301 63.158 0.00 0.00 0.00 3.85
200 201 1.661821 CGCTTCGATCCGTCCATCC 60.662 63.158 0.00 0.00 0.00 3.51
201 202 0.661780 CTCGCTTCGATCCGTCCATC 60.662 60.000 5.35 0.00 34.61 3.51
202 203 1.360551 CTCGCTTCGATCCGTCCAT 59.639 57.895 5.35 0.00 34.61 3.41
203 204 2.771639 CCTCGCTTCGATCCGTCCA 61.772 63.158 5.35 0.00 34.61 4.02
204 205 2.026301 CCTCGCTTCGATCCGTCC 59.974 66.667 5.35 0.00 34.61 4.79
205 206 1.009449 CTCCTCGCTTCGATCCGTC 60.009 63.158 5.35 0.00 34.61 4.79
206 207 2.482333 CCTCCTCGCTTCGATCCGT 61.482 63.158 5.35 0.00 34.61 4.69
207 208 2.333225 CCTCCTCGCTTCGATCCG 59.667 66.667 0.00 0.00 34.61 4.18
208 209 2.077821 GACCCTCCTCGCTTCGATCC 62.078 65.000 0.00 0.00 34.61 3.36
209 210 1.360911 GACCCTCCTCGCTTCGATC 59.639 63.158 0.00 0.00 34.61 3.69
210 211 2.128507 GGACCCTCCTCGCTTCGAT 61.129 63.158 0.00 0.00 34.61 3.59
211 212 2.754658 GGACCCTCCTCGCTTCGA 60.755 66.667 0.00 0.00 32.53 3.71
212 213 2.756283 AGGACCCTCCTCGCTTCG 60.756 66.667 0.00 0.00 45.66 3.79
220 221 1.074699 ATCCCGGTAAGGACCCTCC 60.075 63.158 0.00 0.00 43.64 4.30
221 222 0.105607 AGATCCCGGTAAGGACCCTC 60.106 60.000 0.00 0.00 43.64 4.30
222 223 0.105607 GAGATCCCGGTAAGGACCCT 60.106 60.000 0.00 0.00 43.64 4.34
223 224 1.461911 CGAGATCCCGGTAAGGACCC 61.462 65.000 0.00 0.00 43.64 4.46
224 225 2.039509 CGAGATCCCGGTAAGGACC 58.960 63.158 0.00 0.00 45.00 4.46
225 226 1.363080 GCGAGATCCCGGTAAGGAC 59.637 63.158 0.00 0.00 45.00 3.85
226 227 1.076559 TGCGAGATCCCGGTAAGGA 60.077 57.895 0.00 0.00 45.00 3.36
227 228 1.067582 GTGCGAGATCCCGGTAAGG 59.932 63.158 0.00 0.00 40.63 2.69
228 229 1.299165 CGTGCGAGATCCCGGTAAG 60.299 63.158 0.00 0.00 0.00 2.34
229 230 2.777972 CCGTGCGAGATCCCGGTAA 61.778 63.158 0.00 0.00 35.78 2.85
230 231 3.214123 CCGTGCGAGATCCCGGTA 61.214 66.667 0.00 0.00 35.78 4.02
232 233 4.873129 CACCGTGCGAGATCCCGG 62.873 72.222 0.00 0.00 45.72 5.73
247 248 3.499737 CTGAATGGTCCGCGGCAC 61.500 66.667 23.51 19.14 0.00 5.01
248 249 4.015406 ACTGAATGGTCCGCGGCA 62.015 61.111 23.51 14.97 0.00 5.69
249 250 3.499737 CACTGAATGGTCCGCGGC 61.500 66.667 23.51 16.04 0.00 6.53
250 251 2.819595 CCACTGAATGGTCCGCGG 60.820 66.667 22.12 22.12 44.46 6.46
258 259 0.329261 TCTCCAAGGGCCACTGAATG 59.671 55.000 6.18 0.00 0.00 2.67
259 260 0.622665 CTCTCCAAGGGCCACTGAAT 59.377 55.000 6.18 0.00 0.00 2.57
260 261 1.492133 CCTCTCCAAGGGCCACTGAA 61.492 60.000 6.18 0.00 42.03 3.02
261 262 1.920325 CCTCTCCAAGGGCCACTGA 60.920 63.158 6.18 0.00 42.03 3.41
262 263 1.908340 CTCCTCTCCAAGGGCCACTG 61.908 65.000 6.18 1.84 46.23 3.66
263 264 1.614824 CTCCTCTCCAAGGGCCACT 60.615 63.158 6.18 0.00 46.23 4.00
264 265 2.674220 CCTCCTCTCCAAGGGCCAC 61.674 68.421 6.18 0.00 46.23 5.01
265 266 2.285668 CCTCCTCTCCAAGGGCCA 60.286 66.667 6.18 0.00 46.23 5.36
266 267 2.041265 TCCTCCTCTCCAAGGGCC 59.959 66.667 0.00 0.00 46.23 5.80
267 268 2.741055 GCTCCTCCTCTCCAAGGGC 61.741 68.421 0.00 0.00 46.23 5.19
268 269 0.620121 AAGCTCCTCCTCTCCAAGGG 60.620 60.000 0.00 0.00 46.23 3.95
270 271 1.566211 TCAAGCTCCTCCTCTCCAAG 58.434 55.000 0.00 0.00 0.00 3.61
271 272 1.836166 CATCAAGCTCCTCCTCTCCAA 59.164 52.381 0.00 0.00 0.00 3.53
272 273 1.007600 TCATCAAGCTCCTCCTCTCCA 59.992 52.381 0.00 0.00 0.00 3.86
273 274 1.688197 CTCATCAAGCTCCTCCTCTCC 59.312 57.143 0.00 0.00 0.00 3.71
294 295 2.892425 GGCTTCATCGCCTCGTGG 60.892 66.667 0.00 0.00 46.63 4.94
301 302 3.267860 CGCAGGAGGCTTCATCGC 61.268 66.667 0.00 0.00 41.67 4.58
302 303 3.267860 GCGCAGGAGGCTTCATCG 61.268 66.667 0.30 0.00 41.67 3.84
303 304 2.178890 CAGCGCAGGAGGCTTCATC 61.179 63.158 11.47 0.00 39.08 2.92
304 305 2.124819 CAGCGCAGGAGGCTTCAT 60.125 61.111 11.47 0.00 39.08 2.57
305 306 4.399395 CCAGCGCAGGAGGCTTCA 62.399 66.667 14.67 0.00 39.08 3.02
306 307 4.400961 ACCAGCGCAGGAGGCTTC 62.401 66.667 27.14 0.00 39.08 3.86
307 308 4.400961 GACCAGCGCAGGAGGCTT 62.401 66.667 27.14 1.41 39.08 4.35
327 328 1.811679 GGCTAGGAAGAGCGTGTGC 60.812 63.158 0.00 0.00 43.83 4.57
328 329 1.517257 CGGCTAGGAAGAGCGTGTG 60.517 63.158 0.00 0.00 43.83 3.82
329 330 2.885861 CGGCTAGGAAGAGCGTGT 59.114 61.111 0.00 0.00 43.83 4.49
330 331 2.583593 GCGGCTAGGAAGAGCGTG 60.584 66.667 0.00 0.00 43.83 5.34
331 332 3.839432 GGCGGCTAGGAAGAGCGT 61.839 66.667 0.00 0.00 43.83 5.07
332 333 4.933064 CGGCGGCTAGGAAGAGCG 62.933 72.222 7.61 0.00 43.83 5.03
334 335 4.593864 GGCGGCGGCTAGGAAGAG 62.594 72.222 27.22 0.00 39.81 2.85
336 337 4.593864 GAGGCGGCGGCTAGGAAG 62.594 72.222 36.29 0.00 38.98 3.46
339 340 4.976925 CATGAGGCGGCGGCTAGG 62.977 72.222 36.29 23.05 38.98 3.02
340 341 4.227134 ACATGAGGCGGCGGCTAG 62.227 66.667 36.29 28.03 38.98 3.42
341 342 4.529219 CACATGAGGCGGCGGCTA 62.529 66.667 36.29 23.08 38.98 3.93
346 347 3.680620 TACCAGCACATGAGGCGGC 62.681 63.158 0.00 0.00 36.08 6.53
347 348 0.676466 TTTACCAGCACATGAGGCGG 60.676 55.000 0.00 10.83 36.08 6.13
348 349 1.164411 TTTTACCAGCACATGAGGCG 58.836 50.000 0.00 0.00 36.08 5.52
366 367 3.848272 ACGCATGATCCAACGATTTTT 57.152 38.095 0.00 0.00 0.00 1.94
367 368 3.500982 CAACGCATGATCCAACGATTTT 58.499 40.909 0.00 0.00 0.00 1.82
368 369 2.731968 GCAACGCATGATCCAACGATTT 60.732 45.455 0.00 0.00 0.00 2.17
369 370 1.202177 GCAACGCATGATCCAACGATT 60.202 47.619 0.00 0.00 0.00 3.34
370 371 0.378257 GCAACGCATGATCCAACGAT 59.622 50.000 0.00 0.00 0.00 3.73
371 372 1.643868 GGCAACGCATGATCCAACGA 61.644 55.000 0.00 0.00 0.00 3.85
372 373 1.226379 GGCAACGCATGATCCAACG 60.226 57.895 0.00 0.00 0.00 4.10
373 374 0.099436 GAGGCAACGCATGATCCAAC 59.901 55.000 0.00 0.00 46.39 3.77
374 375 1.031571 GGAGGCAACGCATGATCCAA 61.032 55.000 0.00 0.00 46.39 3.53
375 376 1.451927 GGAGGCAACGCATGATCCA 60.452 57.895 0.00 0.00 46.39 3.41
376 377 2.537560 CGGAGGCAACGCATGATCC 61.538 63.158 0.00 0.00 46.39 3.36
377 378 1.815421 ACGGAGGCAACGCATGATC 60.815 57.895 0.00 0.00 46.39 2.92
378 379 2.108514 CACGGAGGCAACGCATGAT 61.109 57.895 0.00 0.00 46.39 2.45
379 380 2.741985 CACGGAGGCAACGCATGA 60.742 61.111 0.00 0.00 46.39 3.07
380 381 2.741985 TCACGGAGGCAACGCATG 60.742 61.111 0.68 0.00 46.39 4.06
381 382 2.434884 CTCACGGAGGCAACGCAT 60.435 61.111 0.68 0.00 46.39 4.73
382 383 2.933878 AAACTCACGGAGGCAACGCA 62.934 55.000 5.98 0.00 46.39 5.24
383 384 1.782028 AAAACTCACGGAGGCAACGC 61.782 55.000 5.98 0.00 46.39 4.84
384 385 0.041312 CAAAACTCACGGAGGCAACG 60.041 55.000 5.98 0.00 46.39 4.10
385 386 0.317854 GCAAAACTCACGGAGGCAAC 60.318 55.000 5.98 0.00 33.35 4.17
386 387 1.781025 CGCAAAACTCACGGAGGCAA 61.781 55.000 5.98 0.00 33.35 4.52
387 388 2.250939 CGCAAAACTCACGGAGGCA 61.251 57.895 5.98 0.00 33.35 4.75
388 389 2.556287 CGCAAAACTCACGGAGGC 59.444 61.111 5.98 0.00 33.35 4.70
389 390 2.556287 GCGCAAAACTCACGGAGG 59.444 61.111 0.30 0.00 33.35 4.30
390 391 2.170985 CGCGCAAAACTCACGGAG 59.829 61.111 8.75 0.03 35.52 4.63
391 392 2.586635 ACGCGCAAAACTCACGGA 60.587 55.556 5.73 0.00 0.00 4.69
392 393 2.127758 GACGCGCAAAACTCACGG 60.128 61.111 5.73 0.00 0.00 4.94
393 394 1.437089 CAGACGCGCAAAACTCACG 60.437 57.895 5.73 0.00 0.00 4.35
394 395 1.722507 GCAGACGCGCAAAACTCAC 60.723 57.895 5.73 0.00 0.00 3.51
395 396 2.631428 GCAGACGCGCAAAACTCA 59.369 55.556 5.73 0.00 0.00 3.41
406 407 2.202797 AGGTAGCATGCGCAGACG 60.203 61.111 18.32 8.17 42.27 4.18
407 408 1.153568 TCAGGTAGCATGCGCAGAC 60.154 57.895 18.32 10.64 42.27 3.51
408 409 1.153568 GTCAGGTAGCATGCGCAGA 60.154 57.895 18.32 1.16 42.27 4.26
409 410 1.448365 TGTCAGGTAGCATGCGCAG 60.448 57.895 18.32 9.45 42.27 5.18
410 411 1.741401 GTGTCAGGTAGCATGCGCA 60.741 57.895 14.96 14.96 42.27 6.09
411 412 2.802667 CGTGTCAGGTAGCATGCGC 61.803 63.158 13.01 9.42 38.99 6.09
412 413 1.153842 TCGTGTCAGGTAGCATGCG 60.154 57.895 13.01 0.00 0.00 4.73
413 414 1.413767 CGTCGTGTCAGGTAGCATGC 61.414 60.000 10.51 10.51 0.00 4.06
414 415 1.413767 GCGTCGTGTCAGGTAGCATG 61.414 60.000 0.00 0.00 0.00 4.06
415 416 1.153823 GCGTCGTGTCAGGTAGCAT 60.154 57.895 0.00 0.00 0.00 3.79
416 417 1.873270 ATGCGTCGTGTCAGGTAGCA 61.873 55.000 15.65 15.65 37.54 3.49
417 418 0.099968 TATGCGTCGTGTCAGGTAGC 59.900 55.000 0.00 7.62 0.00 3.58
418 419 2.776312 ATATGCGTCGTGTCAGGTAG 57.224 50.000 0.00 0.00 0.00 3.18
419 420 3.513680 AAATATGCGTCGTGTCAGGTA 57.486 42.857 0.00 0.00 0.00 3.08
420 421 2.380084 AAATATGCGTCGTGTCAGGT 57.620 45.000 0.00 0.00 0.00 4.00
421 422 2.930040 AGAAAATATGCGTCGTGTCAGG 59.070 45.455 0.00 0.00 0.00 3.86
422 423 3.242091 CCAGAAAATATGCGTCGTGTCAG 60.242 47.826 0.00 0.00 0.00 3.51
423 424 2.670905 CCAGAAAATATGCGTCGTGTCA 59.329 45.455 0.00 0.00 0.00 3.58
424 425 2.671396 ACCAGAAAATATGCGTCGTGTC 59.329 45.455 0.00 0.00 0.00 3.67
425 426 2.695359 ACCAGAAAATATGCGTCGTGT 58.305 42.857 0.00 0.00 0.00 4.49
426 427 3.124466 TCAACCAGAAAATATGCGTCGTG 59.876 43.478 0.00 0.00 0.00 4.35
427 428 3.124636 GTCAACCAGAAAATATGCGTCGT 59.875 43.478 0.00 0.00 0.00 4.34
428 429 3.670203 GTCAACCAGAAAATATGCGTCG 58.330 45.455 0.00 0.00 0.00 5.12
429 430 3.670203 CGTCAACCAGAAAATATGCGTC 58.330 45.455 0.00 0.00 0.00 5.19
430 431 2.159572 GCGTCAACCAGAAAATATGCGT 60.160 45.455 0.00 0.00 0.00 5.24
431 432 2.440501 GCGTCAACCAGAAAATATGCG 58.559 47.619 0.00 0.00 0.00 4.73
432 433 2.440501 CGCGTCAACCAGAAAATATGC 58.559 47.619 0.00 0.00 0.00 3.14
433 434 2.440501 GCGCGTCAACCAGAAAATATG 58.559 47.619 8.43 0.00 0.00 1.78
434 435 1.062002 CGCGCGTCAACCAGAAAATAT 59.938 47.619 24.19 0.00 0.00 1.28
435 436 0.440758 CGCGCGTCAACCAGAAAATA 59.559 50.000 24.19 0.00 0.00 1.40
436 437 1.206578 CGCGCGTCAACCAGAAAAT 59.793 52.632 24.19 0.00 0.00 1.82
437 438 2.629210 CGCGCGTCAACCAGAAAA 59.371 55.556 24.19 0.00 0.00 2.29
438 439 4.007940 GCGCGCGTCAACCAGAAA 62.008 61.111 32.35 0.00 0.00 2.52
441 442 2.234271 TTAATGCGCGCGTCAACCAG 62.234 55.000 32.35 0.04 0.00 4.00
442 443 1.640210 ATTAATGCGCGCGTCAACCA 61.640 50.000 32.35 20.47 0.00 3.67
443 444 0.923911 GATTAATGCGCGCGTCAACC 60.924 55.000 32.35 5.21 0.00 3.77
444 445 1.246622 CGATTAATGCGCGCGTCAAC 61.247 55.000 32.35 15.24 0.00 3.18
445 446 1.012780 CGATTAATGCGCGCGTCAA 60.013 52.632 32.35 20.31 0.00 3.18
446 447 2.618300 CGATTAATGCGCGCGTCA 59.382 55.556 32.35 27.93 0.00 4.35
447 448 2.128128 CCGATTAATGCGCGCGTC 60.128 61.111 32.35 23.18 0.00 5.19
448 449 4.293626 GCCGATTAATGCGCGCGT 62.294 61.111 32.35 25.30 0.00 6.01
451 452 4.368808 CCGGCCGATTAATGCGCG 62.369 66.667 30.73 0.00 0.00 6.86
452 453 4.683334 GCCGGCCGATTAATGCGC 62.683 66.667 30.73 15.52 0.00 6.09
453 454 4.368808 CGCCGGCCGATTAATGCG 62.369 66.667 30.73 27.46 40.02 4.73
454 455 2.970324 TCGCCGGCCGATTAATGC 60.970 61.111 30.73 19.61 41.89 3.56
462 463 1.626654 GATCAATGTATCGCCGGCCG 61.627 60.000 23.46 21.04 38.61 6.13
463 464 1.298859 GGATCAATGTATCGCCGGCC 61.299 60.000 23.46 7.25 0.00 6.13
464 465 0.320771 AGGATCAATGTATCGCCGGC 60.321 55.000 19.07 19.07 0.00 6.13
465 466 2.607187 GTAGGATCAATGTATCGCCGG 58.393 52.381 0.00 0.00 0.00 6.13
466 467 2.251040 CGTAGGATCAATGTATCGCCG 58.749 52.381 0.00 0.00 0.00 6.46
467 468 3.299340 ACGTAGGATCAATGTATCGCC 57.701 47.619 0.00 0.00 0.00 5.54
468 469 4.148348 GTCAACGTAGGATCAATGTATCGC 59.852 45.833 0.00 0.00 0.00 4.58
469 470 4.378910 CGTCAACGTAGGATCAATGTATCG 59.621 45.833 0.00 0.00 34.11 2.92
470 471 5.807730 CGTCAACGTAGGATCAATGTATC 57.192 43.478 0.00 0.00 34.11 2.24
485 486 1.733706 CATGCATGCATACGTCAACG 58.266 50.000 31.73 13.87 38.90 4.10
525 526 4.154347 GAGAGCTGCCCCGTCTGG 62.154 72.222 0.00 0.00 0.00 3.86
526 527 4.504916 CGAGAGCTGCCCCGTCTG 62.505 72.222 0.00 0.00 0.00 3.51
537 538 2.278271 GTACGCTGAGCCGAGAGC 60.278 66.667 0.00 0.00 44.25 4.09
538 539 2.329678 CTGGTACGCTGAGCCGAGAG 62.330 65.000 0.00 0.00 0.00 3.20
539 540 2.360726 TGGTACGCTGAGCCGAGA 60.361 61.111 0.00 0.00 0.00 4.04
540 541 1.729470 ATCTGGTACGCTGAGCCGAG 61.729 60.000 0.00 0.00 0.00 4.63
541 542 1.320344 AATCTGGTACGCTGAGCCGA 61.320 55.000 0.00 0.00 0.00 5.54
542 543 0.460284 AAATCTGGTACGCTGAGCCG 60.460 55.000 0.00 0.00 0.00 5.52
543 544 1.666189 GAAAATCTGGTACGCTGAGCC 59.334 52.381 0.00 0.00 0.00 4.70
544 545 2.622436 AGAAAATCTGGTACGCTGAGC 58.378 47.619 0.00 0.00 0.00 4.26
545 546 4.201628 CGAAAGAAAATCTGGTACGCTGAG 60.202 45.833 0.00 0.00 0.00 3.35
546 547 3.678072 CGAAAGAAAATCTGGTACGCTGA 59.322 43.478 0.00 0.00 0.00 4.26
547 548 3.678072 TCGAAAGAAAATCTGGTACGCTG 59.322 43.478 0.00 0.00 37.03 5.18
548 549 3.921677 TCGAAAGAAAATCTGGTACGCT 58.078 40.909 0.00 0.00 37.03 5.07
549 550 3.483738 GCTCGAAAGAAAATCTGGTACGC 60.484 47.826 0.00 0.00 41.32 4.42
550 551 3.241678 CGCTCGAAAGAAAATCTGGTACG 60.242 47.826 0.00 0.00 41.32 3.67
551 552 3.483738 GCGCTCGAAAGAAAATCTGGTAC 60.484 47.826 0.00 0.00 41.32 3.34
552 553 2.671396 GCGCTCGAAAGAAAATCTGGTA 59.329 45.455 0.00 0.00 41.32 3.25
553 554 1.464997 GCGCTCGAAAGAAAATCTGGT 59.535 47.619 0.00 0.00 41.32 4.00
554 555 1.202076 GGCGCTCGAAAGAAAATCTGG 60.202 52.381 7.64 0.00 41.32 3.86
555 556 1.464608 TGGCGCTCGAAAGAAAATCTG 59.535 47.619 7.64 0.00 41.32 2.90
556 557 1.808411 TGGCGCTCGAAAGAAAATCT 58.192 45.000 7.64 0.00 41.32 2.40
557 558 2.611974 TTGGCGCTCGAAAGAAAATC 57.388 45.000 7.64 0.00 41.32 2.17
558 559 3.243401 ACTTTTGGCGCTCGAAAGAAAAT 60.243 39.130 29.69 14.80 45.46 1.82
559 560 2.098443 ACTTTTGGCGCTCGAAAGAAAA 59.902 40.909 29.69 14.00 45.46 2.29
560 561 1.673920 ACTTTTGGCGCTCGAAAGAAA 59.326 42.857 29.69 13.00 45.46 2.52
561 562 1.002900 CACTTTTGGCGCTCGAAAGAA 60.003 47.619 29.69 9.80 45.46 2.52
562 563 0.586319 CACTTTTGGCGCTCGAAAGA 59.414 50.000 29.69 9.47 45.46 2.52
564 565 1.262151 GTACACTTTTGGCGCTCGAAA 59.738 47.619 7.64 9.10 0.00 3.46
565 566 0.863144 GTACACTTTTGGCGCTCGAA 59.137 50.000 7.64 0.29 0.00 3.71
566 567 0.947180 GGTACACTTTTGGCGCTCGA 60.947 55.000 7.64 0.00 0.00 4.04
567 568 1.495951 GGTACACTTTTGGCGCTCG 59.504 57.895 7.64 0.00 0.00 5.03
568 569 1.226030 ACGGTACACTTTTGGCGCTC 61.226 55.000 7.64 0.00 0.00 5.03
569 570 1.227734 ACGGTACACTTTTGGCGCT 60.228 52.632 7.64 0.00 0.00 5.92
570 571 1.082366 CACGGTACACTTTTGGCGC 60.082 57.895 0.00 0.00 0.00 6.53
571 572 0.658897 AACACGGTACACTTTTGGCG 59.341 50.000 0.00 0.00 0.00 5.69
572 573 2.855660 AAACACGGTACACTTTTGGC 57.144 45.000 0.00 0.00 0.00 4.52
573 574 6.037391 TCTCTAAAAACACGGTACACTTTTGG 59.963 38.462 0.00 0.00 0.00 3.28
574 575 7.007313 TCTCTAAAAACACGGTACACTTTTG 57.993 36.000 0.00 0.00 0.00 2.44
575 576 7.550196 TCTTCTCTAAAAACACGGTACACTTTT 59.450 33.333 0.00 0.00 0.00 2.27
576 577 7.043565 TCTTCTCTAAAAACACGGTACACTTT 58.956 34.615 0.00 0.00 0.00 2.66
577 578 6.576185 TCTTCTCTAAAAACACGGTACACTT 58.424 36.000 0.00 0.00 0.00 3.16
578 579 6.152932 TCTTCTCTAAAAACACGGTACACT 57.847 37.500 0.00 0.00 0.00 3.55
579 580 6.833342 TTCTTCTCTAAAAACACGGTACAC 57.167 37.500 0.00 0.00 0.00 2.90
580 581 7.267128 TCTTTCTTCTCTAAAAACACGGTACA 58.733 34.615 0.00 0.00 0.00 2.90
581 582 7.704789 TCTTTCTTCTCTAAAAACACGGTAC 57.295 36.000 0.00 0.00 0.00 3.34
582 583 8.721019 TTTCTTTCTTCTCTAAAAACACGGTA 57.279 30.769 0.00 0.00 0.00 4.02
583 584 7.619964 TTTCTTTCTTCTCTAAAAACACGGT 57.380 32.000 0.00 0.00 0.00 4.83
604 605 9.469239 CCGTTACGTCTCTGTAAAATTTATTTC 57.531 33.333 3.52 0.00 36.17 2.17
605 606 9.206870 TCCGTTACGTCTCTGTAAAATTTATTT 57.793 29.630 3.52 0.00 36.17 1.40
606 607 8.761575 TCCGTTACGTCTCTGTAAAATTTATT 57.238 30.769 3.52 0.00 36.17 1.40
607 608 8.814235 CATCCGTTACGTCTCTGTAAAATTTAT 58.186 33.333 3.52 0.00 36.17 1.40
608 609 7.814107 ACATCCGTTACGTCTCTGTAAAATTTA 59.186 33.333 3.52 0.00 36.17 1.40
609 610 6.647895 ACATCCGTTACGTCTCTGTAAAATTT 59.352 34.615 3.52 0.00 36.17 1.82
610 611 6.090358 CACATCCGTTACGTCTCTGTAAAATT 59.910 38.462 3.52 0.00 36.17 1.82
611 612 5.575606 CACATCCGTTACGTCTCTGTAAAAT 59.424 40.000 3.52 0.00 36.17 1.82
612 613 4.919168 CACATCCGTTACGTCTCTGTAAAA 59.081 41.667 3.52 0.00 36.17 1.52
613 614 4.216042 TCACATCCGTTACGTCTCTGTAAA 59.784 41.667 3.52 0.00 36.17 2.01
614 615 3.752747 TCACATCCGTTACGTCTCTGTAA 59.247 43.478 3.52 0.00 32.12 2.41
615 616 3.337358 TCACATCCGTTACGTCTCTGTA 58.663 45.455 3.52 0.00 0.00 2.74
616 617 2.156917 TCACATCCGTTACGTCTCTGT 58.843 47.619 3.52 0.00 0.00 3.41
617 618 2.913777 TCACATCCGTTACGTCTCTG 57.086 50.000 3.52 0.00 0.00 3.35
618 619 5.560375 CGATATTCACATCCGTTACGTCTCT 60.560 44.000 3.52 0.00 0.00 3.10
619 620 4.611782 CGATATTCACATCCGTTACGTCTC 59.388 45.833 3.52 0.00 0.00 3.36
620 621 4.036027 ACGATATTCACATCCGTTACGTCT 59.964 41.667 3.52 0.00 0.00 4.18
621 622 4.285292 ACGATATTCACATCCGTTACGTC 58.715 43.478 3.52 0.00 0.00 4.34
622 623 4.201940 TGACGATATTCACATCCGTTACGT 60.202 41.667 3.52 0.00 0.00 3.57
623 624 4.145928 GTGACGATATTCACATCCGTTACG 59.854 45.833 0.00 0.00 44.62 3.18
624 625 4.145928 CGTGACGATATTCACATCCGTTAC 59.854 45.833 0.00 0.00 45.38 2.50
625 626 4.284485 CGTGACGATATTCACATCCGTTA 58.716 43.478 0.00 0.00 45.38 3.18
626 627 3.113322 CGTGACGATATTCACATCCGTT 58.887 45.455 0.00 0.00 45.38 4.44
627 628 2.543031 CCGTGACGATATTCACATCCGT 60.543 50.000 6.54 0.00 45.38 4.69
628 629 2.051423 CCGTGACGATATTCACATCCG 58.949 52.381 6.54 0.00 45.38 4.18
629 630 3.093717 ACCGTGACGATATTCACATCC 57.906 47.619 6.54 0.00 45.38 3.51
630 631 5.038683 TGTAACCGTGACGATATTCACATC 58.961 41.667 6.54 0.00 45.38 3.06
631 632 4.802039 GTGTAACCGTGACGATATTCACAT 59.198 41.667 6.54 0.00 45.38 3.21
632 633 4.168014 GTGTAACCGTGACGATATTCACA 58.832 43.478 6.54 0.00 45.38 3.58
633 634 4.750172 GTGTAACCGTGACGATATTCAC 57.250 45.455 6.54 5.61 42.24 3.18
648 649 3.139077 CCTCAGTTGGAGTTGGTGTAAC 58.861 50.000 0.00 0.00 42.40 2.50
649 650 3.042682 TCCTCAGTTGGAGTTGGTGTAA 58.957 45.455 0.00 0.00 42.40 2.41
650 651 2.684943 TCCTCAGTTGGAGTTGGTGTA 58.315 47.619 0.00 0.00 42.40 2.90
651 652 1.507140 TCCTCAGTTGGAGTTGGTGT 58.493 50.000 0.00 0.00 42.40 4.16
652 653 2.638480 TTCCTCAGTTGGAGTTGGTG 57.362 50.000 0.00 0.00 42.40 4.17
653 654 3.662759 TTTTCCTCAGTTGGAGTTGGT 57.337 42.857 0.00 0.00 42.40 3.67
673 674 8.912988 TGAGATCAAGTTATGGAAACTGTTTTT 58.087 29.630 7.28 0.00 0.00 1.94
674 675 8.463930 TGAGATCAAGTTATGGAAACTGTTTT 57.536 30.769 7.28 0.00 0.00 2.43
675 676 8.463930 TTGAGATCAAGTTATGGAAACTGTTT 57.536 30.769 5.29 5.29 0.00 2.83
676 677 8.463930 TTTGAGATCAAGTTATGGAAACTGTT 57.536 30.769 0.00 0.00 37.15 3.16
677 678 7.939039 TCTTTGAGATCAAGTTATGGAAACTGT 59.061 33.333 0.00 0.00 37.15 3.55
678 679 8.327941 TCTTTGAGATCAAGTTATGGAAACTG 57.672 34.615 0.00 0.00 37.15 3.16
726 730 0.036388 GGGTCGACCAAATCAGAGCA 60.036 55.000 34.40 0.00 39.85 4.26
728 732 0.530744 TCGGGTCGACCAAATCAGAG 59.469 55.000 34.40 14.74 40.22 3.35
753 757 2.267045 GCAAAGGAATGCGAGGGTT 58.733 52.632 0.00 0.00 36.45 4.11
801 805 3.388350 ACAAGAGAGGTTTCGACTCCTTT 59.612 43.478 8.68 3.86 35.58 3.11
865 870 1.303309 GAGCCATGGTGATTCCTTCG 58.697 55.000 14.67 0.00 37.07 3.79
952 957 1.162181 CGTGGATCGCATCTTGGCAT 61.162 55.000 0.00 0.00 0.00 4.40
963 968 2.231529 AGAGGAGGATAACGTGGATCG 58.768 52.381 0.00 0.00 46.00 3.69
1005 1010 2.359230 GCTGCAGGACGCTCCTTT 60.359 61.111 17.12 0.00 46.91 3.11
1030 1035 2.267681 GACGTCTGATCGAAGGGCGT 62.268 60.000 8.70 13.34 41.80 5.68
1037 1042 0.952280 GGCTATGGACGTCTGATCGA 59.048 55.000 16.46 0.00 34.70 3.59
1163 1168 4.595781 ACTTACACCATGAAGTCCACCTAA 59.404 41.667 0.00 0.00 29.85 2.69
1188 1193 1.301716 GGCCTTGCGACACTTCAGA 60.302 57.895 0.00 0.00 0.00 3.27
1234 1239 0.669318 GATTGCAACGGTCGACAGGA 60.669 55.000 19.84 3.80 0.00 3.86
1276 1281 7.035612 CACTAACAAGCTTGGAAGAAGTTTTT 58.964 34.615 29.18 13.07 0.00 1.94
1277 1282 6.152831 ACACTAACAAGCTTGGAAGAAGTTTT 59.847 34.615 29.18 13.75 0.00 2.43
1278 1283 5.652452 ACACTAACAAGCTTGGAAGAAGTTT 59.348 36.000 29.18 14.42 0.00 2.66
1279 1284 5.193679 ACACTAACAAGCTTGGAAGAAGTT 58.806 37.500 29.18 15.11 0.00 2.66
1280 1285 4.781934 ACACTAACAAGCTTGGAAGAAGT 58.218 39.130 29.18 22.23 0.00 3.01
1281 1286 5.757850 AACACTAACAAGCTTGGAAGAAG 57.242 39.130 29.18 21.72 0.00 2.85
1282 1287 6.588204 TCTAACACTAACAAGCTTGGAAGAA 58.412 36.000 29.18 9.41 0.00 2.52
1283 1288 6.169557 TCTAACACTAACAAGCTTGGAAGA 57.830 37.500 29.18 15.56 0.00 2.87
1284 1289 8.723942 ATATCTAACACTAACAAGCTTGGAAG 57.276 34.615 29.18 25.10 0.00 3.46
1285 1290 9.595823 GTATATCTAACACTAACAAGCTTGGAA 57.404 33.333 29.18 15.89 0.00 3.53
1286 1291 8.202137 GGTATATCTAACACTAACAAGCTTGGA 58.798 37.037 29.18 16.10 0.00 3.53
1287 1292 7.985184 TGGTATATCTAACACTAACAAGCTTGG 59.015 37.037 29.18 14.74 0.00 3.61
1288 1293 8.942338 TGGTATATCTAACACTAACAAGCTTG 57.058 34.615 24.84 24.84 0.00 4.01
1327 1332 3.307904 GGAGTATTCCCTCCGTCCAAAAA 60.308 47.826 0.00 0.00 41.58 1.94
1328 1333 2.237893 GGAGTATTCCCTCCGTCCAAAA 59.762 50.000 0.00 0.00 41.58 2.44
1329 1334 1.835531 GGAGTATTCCCTCCGTCCAAA 59.164 52.381 0.00 0.00 41.58 3.28
1330 1335 1.492764 GGAGTATTCCCTCCGTCCAA 58.507 55.000 0.00 0.00 41.58 3.53
1331 1336 3.218974 GGAGTATTCCCTCCGTCCA 57.781 57.895 0.00 0.00 41.58 4.02
1336 1341 3.564264 AGTCTTACGGAGTATTCCCTCC 58.436 50.000 0.00 0.00 45.21 4.30
1337 1342 4.276431 CAGAGTCTTACGGAGTATTCCCTC 59.724 50.000 0.00 0.00 45.21 4.30
1338 1343 4.079901 TCAGAGTCTTACGGAGTATTCCCT 60.080 45.833 0.00 0.00 45.21 4.20
1339 1344 4.205587 TCAGAGTCTTACGGAGTATTCCC 58.794 47.826 0.00 0.00 45.21 3.97
1340 1345 4.883006 ACTCAGAGTCTTACGGAGTATTCC 59.117 45.833 8.67 0.00 45.21 3.01
1341 1346 5.007921 GGACTCAGAGTCTTACGGAGTATTC 59.992 48.000 26.51 4.95 44.46 1.75
1342 1347 4.883006 GGACTCAGAGTCTTACGGAGTATT 59.117 45.833 26.51 0.00 44.46 1.89
1343 1348 4.080469 TGGACTCAGAGTCTTACGGAGTAT 60.080 45.833 26.51 0.00 44.46 2.12
1344 1349 3.262660 TGGACTCAGAGTCTTACGGAGTA 59.737 47.826 26.51 3.60 44.46 2.59
1345 1350 2.040012 TGGACTCAGAGTCTTACGGAGT 59.960 50.000 26.51 9.91 44.46 3.85
1346 1351 2.420722 GTGGACTCAGAGTCTTACGGAG 59.579 54.545 26.51 4.15 44.46 4.63
1347 1352 2.224695 TGTGGACTCAGAGTCTTACGGA 60.225 50.000 26.51 10.97 44.46 4.69
1348 1353 2.095161 GTGTGGACTCAGAGTCTTACGG 60.095 54.545 26.51 0.00 44.46 4.02
1349 1354 2.095161 GGTGTGGACTCAGAGTCTTACG 60.095 54.545 26.51 0.00 44.46 3.18
1350 1355 2.095161 CGGTGTGGACTCAGAGTCTTAC 60.095 54.545 26.51 23.79 44.46 2.34
1351 1356 2.160205 CGGTGTGGACTCAGAGTCTTA 58.840 52.381 26.51 15.21 44.46 2.10
1352 1357 0.962489 CGGTGTGGACTCAGAGTCTT 59.038 55.000 26.51 0.00 44.46 3.01
1353 1358 0.178987 ACGGTGTGGACTCAGAGTCT 60.179 55.000 26.51 5.56 44.46 3.24
1354 1359 0.674534 AACGGTGTGGACTCAGAGTC 59.325 55.000 20.95 20.95 44.32 3.36
1355 1360 1.068741 GAAACGGTGTGGACTCAGAGT 59.931 52.381 1.46 1.46 0.00 3.24
1356 1361 1.605712 GGAAACGGTGTGGACTCAGAG 60.606 57.143 0.00 0.00 0.00 3.35
1357 1362 0.391597 GGAAACGGTGTGGACTCAGA 59.608 55.000 0.00 0.00 0.00 3.27
1358 1363 0.105964 TGGAAACGGTGTGGACTCAG 59.894 55.000 0.00 0.00 0.00 3.35
1359 1364 0.542333 TTGGAAACGGTGTGGACTCA 59.458 50.000 0.00 0.00 0.00 3.41
1360 1365 1.332686 GTTTGGAAACGGTGTGGACTC 59.667 52.381 0.00 0.00 0.00 3.36
1361 1366 1.385528 GTTTGGAAACGGTGTGGACT 58.614 50.000 0.00 0.00 0.00 3.85
1362 1367 0.382873 GGTTTGGAAACGGTGTGGAC 59.617 55.000 0.00 0.00 39.77 4.02
1363 1368 1.096386 CGGTTTGGAAACGGTGTGGA 61.096 55.000 2.52 0.00 39.77 4.02
1364 1369 1.357334 CGGTTTGGAAACGGTGTGG 59.643 57.895 2.52 0.00 39.77 4.17
1365 1370 1.357334 CCGGTTTGGAAACGGTGTG 59.643 57.895 8.91 0.00 42.00 3.82
1366 1371 0.179936 TACCGGTTTGGAAACGGTGT 59.820 50.000 27.56 15.63 41.91 4.16
1367 1372 0.587768 GTACCGGTTTGGAAACGGTG 59.412 55.000 27.56 11.72 41.91 4.94
1368 1373 0.879839 CGTACCGGTTTGGAAACGGT 60.880 55.000 24.00 24.00 42.76 4.83
1369 1374 1.861440 CGTACCGGTTTGGAAACGG 59.139 57.895 15.04 15.01 42.76 4.44
1370 1375 1.204813 GCGTACCGGTTTGGAAACG 59.795 57.895 15.04 17.29 46.38 3.60
1371 1376 0.041047 GTGCGTACCGGTTTGGAAAC 60.041 55.000 15.04 1.74 42.00 2.78
1372 1377 0.463295 TGTGCGTACCGGTTTGGAAA 60.463 50.000 15.04 0.00 42.00 3.13
1373 1378 0.881159 CTGTGCGTACCGGTTTGGAA 60.881 55.000 15.04 0.00 42.00 3.53
1374 1379 1.301087 CTGTGCGTACCGGTTTGGA 60.301 57.895 15.04 3.63 42.00 3.53
1375 1380 2.961669 GCTGTGCGTACCGGTTTGG 61.962 63.158 15.04 3.21 46.41 3.28
1376 1381 0.668096 TAGCTGTGCGTACCGGTTTG 60.668 55.000 15.04 6.95 0.00 2.93
1377 1382 0.389426 CTAGCTGTGCGTACCGGTTT 60.389 55.000 15.04 0.00 0.00 3.27
1378 1383 1.214589 CTAGCTGTGCGTACCGGTT 59.785 57.895 15.04 0.00 0.00 4.44
1379 1384 2.882876 CTAGCTGTGCGTACCGGT 59.117 61.111 13.98 13.98 0.00 5.28
1380 1385 2.582498 GCTAGCTGTGCGTACCGG 60.582 66.667 7.70 0.00 0.00 5.28
1381 1386 1.874019 CTGCTAGCTGTGCGTACCG 60.874 63.158 17.23 0.00 0.00 4.02
1382 1387 2.167861 GCTGCTAGCTGTGCGTACC 61.168 63.158 21.03 1.03 38.45 3.34
1383 1388 2.167861 GGCTGCTAGCTGTGCGTAC 61.168 63.158 21.03 0.00 41.99 3.67
1384 1389 2.184322 GGCTGCTAGCTGTGCGTA 59.816 61.111 21.03 0.00 41.99 4.42
1387 1392 4.767255 ACCGGCTGCTAGCTGTGC 62.767 66.667 21.03 18.25 45.98 4.57
1388 1393 1.672356 AAACCGGCTGCTAGCTGTG 60.672 57.895 21.03 14.22 45.98 3.66
1389 1394 1.672356 CAAACCGGCTGCTAGCTGT 60.672 57.895 21.03 6.12 45.98 4.40
1390 1395 3.044059 GCAAACCGGCTGCTAGCTG 62.044 63.158 19.30 16.92 46.95 4.24
1391 1396 2.747855 GCAAACCGGCTGCTAGCT 60.748 61.111 19.30 0.00 41.99 3.32
1449 1454 0.819582 GGAACGAGGTCGGTTGGATA 59.180 55.000 4.13 0.00 40.66 2.59
1473 1478 6.220201 CGGGTCTGTTGGATTTGTTATTTTT 58.780 36.000 0.00 0.00 0.00 1.94
1474 1479 5.279256 CCGGGTCTGTTGGATTTGTTATTTT 60.279 40.000 0.00 0.00 0.00 1.82
1475 1480 4.219725 CCGGGTCTGTTGGATTTGTTATTT 59.780 41.667 0.00 0.00 0.00 1.40
1476 1481 3.761752 CCGGGTCTGTTGGATTTGTTATT 59.238 43.478 0.00 0.00 0.00 1.40
1477 1482 3.352648 CCGGGTCTGTTGGATTTGTTAT 58.647 45.455 0.00 0.00 0.00 1.89
1478 1483 2.553466 CCCGGGTCTGTTGGATTTGTTA 60.553 50.000 14.18 0.00 0.00 2.41
1479 1484 1.616159 CCGGGTCTGTTGGATTTGTT 58.384 50.000 0.00 0.00 0.00 2.83
1480 1485 0.251165 CCCGGGTCTGTTGGATTTGT 60.251 55.000 14.18 0.00 0.00 2.83
1481 1486 1.595093 GCCCGGGTCTGTTGGATTTG 61.595 60.000 24.63 0.00 0.00 2.32
1482 1487 1.304134 GCCCGGGTCTGTTGGATTT 60.304 57.895 24.63 0.00 0.00 2.17
1509 1514 4.333926 GCTGGGGAGATTATTTATCGATGC 59.666 45.833 8.54 0.00 38.36 3.91
1514 1519 3.333680 TGGGGCTGGGGAGATTATTTATC 59.666 47.826 0.00 0.00 0.00 1.75
1644 1655 0.307146 CGGGGAGATCGTCGTAGAAC 59.693 60.000 0.00 0.00 39.69 3.01
1920 1952 0.321671 GGCAGCAGTAGGACTTCACA 59.678 55.000 0.00 0.00 0.00 3.58
2355 2387 2.159393 TGCTGCAGCGACATTATTTTCC 60.159 45.455 32.11 2.73 45.83 3.13
2531 2572 1.019805 GCCTTCCGACTTTCCTTCCG 61.020 60.000 0.00 0.00 0.00 4.30
2556 2600 9.435688 TCTTCATTCGAGTTCATCTTTTTATCA 57.564 29.630 0.00 0.00 0.00 2.15
2682 2729 2.743928 CCCAGCTGCTGTTCGTCC 60.744 66.667 26.41 0.00 0.00 4.79
2691 2738 1.105457 TGATATTTGTGCCCAGCTGC 58.895 50.000 8.66 0.00 0.00 5.25
2692 2739 3.056678 TGTTTGATATTTGTGCCCAGCTG 60.057 43.478 6.78 6.78 0.00 4.24
2701 2748 4.562082 TCGTCCTCGTGTTTGATATTTGT 58.438 39.130 0.00 0.00 38.33 2.83
2703 2750 4.992319 TGTTCGTCCTCGTGTTTGATATTT 59.008 37.500 0.00 0.00 38.33 1.40
2796 2843 1.228367 AATCCCAGCATCGCCATCC 60.228 57.895 0.00 0.00 0.00 3.51
2846 2893 2.330231 ATTTGTTCGTCATGTTGCCG 57.670 45.000 0.00 0.00 0.00 5.69
2857 2907 5.013861 ACGTACAGTAGCAAATTTGTTCG 57.986 39.130 19.03 13.45 39.28 3.95
2878 2930 8.885302 AGAAAAATAATAGGCGACGTTAAAAC 57.115 30.769 0.00 0.00 0.00 2.43
2956 3008 3.560068 CACCGGCCATAGTTTATTCTCAC 59.440 47.826 0.00 0.00 0.00 3.51
2963 3015 1.414919 CCTAGCACCGGCCATAGTTTA 59.585 52.381 0.00 0.00 42.56 2.01
2966 3018 2.808206 GCCTAGCACCGGCCATAGT 61.808 63.158 0.00 0.00 41.73 2.12
2967 3019 2.031163 GCCTAGCACCGGCCATAG 59.969 66.667 0.00 0.26 41.73 2.23
2968 3020 3.923864 CGCCTAGCACCGGCCATA 61.924 66.667 0.00 0.00 44.73 2.74
3684 4009 2.554344 CCCCCTTTTCTCGTTCAATGGA 60.554 50.000 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.