Multiple sequence alignment - TraesCS7D01G153900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G153900 chr7D 100.000 2354 0 0 1 2354 101762767 101760414 0.000000e+00 4348.0
1 TraesCS7D01G153900 chr7D 100.000 1477 0 0 2908 4384 101759860 101758384 0.000000e+00 2728.0
2 TraesCS7D01G153900 chr7D 97.934 726 14 1 3660 4384 101748971 101748246 0.000000e+00 1256.0
3 TraesCS7D01G153900 chr7D 92.916 367 17 6 1 359 255781464 255781099 3.880000e-145 525.0
4 TraesCS7D01G153900 chr7D 92.623 366 20 3 1 361 554470438 554470075 1.810000e-143 520.0
5 TraesCS7D01G153900 chr7B 93.098 1985 97 20 394 2353 59094373 59096342 0.000000e+00 2870.0
6 TraesCS7D01G153900 chr7B 97.576 330 7 1 3138 3466 59096352 59096681 8.230000e-157 564.0
7 TraesCS7D01G153900 chr7B 95.349 43 2 0 3537 3579 59098209 59098251 7.870000e-08 69.4
8 TraesCS7D01G153900 chr7B 100.000 28 0 0 1830 1857 646042622 646042595 8.000000e-03 52.8
9 TraesCS7D01G153900 chr7A 88.283 1246 91 19 393 1585 105625281 105626524 0.000000e+00 1441.0
10 TraesCS7D01G153900 chr7A 86.631 374 14 8 1 361 88317665 88317315 8.900000e-102 381.0
11 TraesCS7D01G153900 chr6D 97.922 722 15 0 3663 4384 37158641 37159362 0.000000e+00 1251.0
12 TraesCS7D01G153900 chr2D 96.819 723 20 3 3663 4384 17932014 17931294 0.000000e+00 1205.0
13 TraesCS7D01G153900 chr2D 96.566 728 18 4 3660 4384 802792 803515 0.000000e+00 1199.0
14 TraesCS7D01G153900 chr2D 95.598 727 28 4 3660 4384 17922212 17921488 0.000000e+00 1162.0
15 TraesCS7D01G153900 chr5D 96.566 728 21 3 3658 4384 381661807 381661083 0.000000e+00 1203.0
16 TraesCS7D01G153900 chr5D 96.286 727 22 4 3660 4384 381652116 381651393 0.000000e+00 1188.0
17 TraesCS7D01G153900 chr5D 95.467 728 30 3 3660 4384 540646305 540645578 0.000000e+00 1158.0
18 TraesCS7D01G153900 chr5D 91.444 374 17 4 1 361 1805324 1804953 2.350000e-137 499.0
19 TraesCS7D01G153900 chr1D 95.983 722 28 1 3663 4384 43787192 43786472 0.000000e+00 1171.0
20 TraesCS7D01G153900 chr1D 92.267 375 15 7 1 362 413402604 413402977 1.810000e-143 520.0
21 TraesCS7D01G153900 chr1D 91.223 376 19 8 1 363 464917318 464916944 2.350000e-137 499.0
22 TraesCS7D01G153900 chr1D 90.649 385 21 8 1 370 13890723 13890339 8.470000e-137 497.0
23 TraesCS7D01G153900 chr4D 91.444 374 17 4 1 361 315820748 315820377 2.350000e-137 499.0
24 TraesCS7D01G153900 chr1B 89.757 371 27 4 1 362 34728948 34729316 8.590000e-127 464.0
25 TraesCS7D01G153900 chr2B 89.218 371 31 3 1 362 222583895 222583525 5.170000e-124 455.0
26 TraesCS7D01G153900 chr2B 85.511 352 28 4 24 352 786701949 786701598 3.250000e-91 346.0
27 TraesCS7D01G153900 chr5A 89.276 373 24 9 1 361 687862694 687863062 1.860000e-123 453.0
28 TraesCS7D01G153900 chr6A 87.162 148 12 5 215 361 579049988 579050129 1.260000e-35 161.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G153900 chr7D 101758384 101762767 4383 True 3538.0 4348 100.000 1 4384 2 chr7D.!!$R4 4383
1 TraesCS7D01G153900 chr7D 101748246 101748971 725 True 1256.0 1256 97.934 3660 4384 1 chr7D.!!$R1 724
2 TraesCS7D01G153900 chr7B 59094373 59098251 3878 False 1167.8 2870 95.341 394 3579 3 chr7B.!!$F1 3185
3 TraesCS7D01G153900 chr7A 105625281 105626524 1243 False 1441.0 1441 88.283 393 1585 1 chr7A.!!$F1 1192
4 TraesCS7D01G153900 chr6D 37158641 37159362 721 False 1251.0 1251 97.922 3663 4384 1 chr6D.!!$F1 721
5 TraesCS7D01G153900 chr2D 17931294 17932014 720 True 1205.0 1205 96.819 3663 4384 1 chr2D.!!$R2 721
6 TraesCS7D01G153900 chr2D 802792 803515 723 False 1199.0 1199 96.566 3660 4384 1 chr2D.!!$F1 724
7 TraesCS7D01G153900 chr2D 17921488 17922212 724 True 1162.0 1162 95.598 3660 4384 1 chr2D.!!$R1 724
8 TraesCS7D01G153900 chr5D 381661083 381661807 724 True 1203.0 1203 96.566 3658 4384 1 chr5D.!!$R3 726
9 TraesCS7D01G153900 chr5D 381651393 381652116 723 True 1188.0 1188 96.286 3660 4384 1 chr5D.!!$R2 724
10 TraesCS7D01G153900 chr5D 540645578 540646305 727 True 1158.0 1158 95.467 3660 4384 1 chr5D.!!$R4 724
11 TraesCS7D01G153900 chr1D 43786472 43787192 720 True 1171.0 1171 95.983 3663 4384 1 chr1D.!!$R2 721

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
75 76 0.030369 ATGTCGCCGAAGACCGTATC 59.970 55.000 0.0 0.0 40.26 2.24 F
168 169 0.248539 AACGCCGTCGCTTCTAGATC 60.249 55.000 0.0 0.0 39.84 2.75 F
386 387 0.610232 GGCACCATCCAGTTGCTTCT 60.610 55.000 0.0 0.0 0.00 2.85 F
776 793 1.001633 TGCTAAACCGAGGTCAAGTCC 59.998 52.381 0.0 0.0 0.00 3.85 F
2966 3036 0.335705 ATGTCCCACATGCCCATTCA 59.664 50.000 0.0 0.0 37.45 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1780 1843 0.261991 CTACAGGACCCTCTGCCCTA 59.738 60.000 0.00 0.0 38.26 3.53 R
2088 2154 0.241213 GGAGCTTCTGGAAAAACGCC 59.759 55.000 0.00 0.0 0.00 5.68 R
2915 2985 9.521503 TGTGTCAATTTCGTTTCAAATGATTAA 57.478 25.926 0.00 0.0 0.00 1.40 R
3129 3199 0.098728 GCAACGTGCATGTGGGATAC 59.901 55.000 13.39 0.0 44.26 2.24 R
4051 5584 1.025647 GTGAGTCCGACGCCTAGAGT 61.026 60.000 0.00 0.0 0.00 3.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 4.641645 CCGCCAAGCAGTCCACCA 62.642 66.667 0.00 0.00 0.00 4.17
19 20 3.052082 CGCCAAGCAGTCCACCAG 61.052 66.667 0.00 0.00 0.00 4.00
20 21 2.674380 GCCAAGCAGTCCACCAGG 60.674 66.667 0.00 0.00 0.00 4.45
21 22 2.674380 CCAAGCAGTCCACCAGGC 60.674 66.667 0.00 0.00 33.74 4.85
22 23 2.674380 CAAGCAGTCCACCAGGCC 60.674 66.667 0.00 0.00 33.74 5.19
23 24 3.971702 AAGCAGTCCACCAGGCCC 61.972 66.667 0.00 0.00 33.74 5.80
24 25 4.990910 AGCAGTCCACCAGGCCCT 62.991 66.667 0.00 0.00 33.74 5.19
25 26 4.416738 GCAGTCCACCAGGCCCTC 62.417 72.222 0.00 0.00 33.74 4.30
26 27 4.087892 CAGTCCACCAGGCCCTCG 62.088 72.222 0.00 0.00 33.74 4.63
27 28 4.316823 AGTCCACCAGGCCCTCGA 62.317 66.667 0.00 0.00 33.74 4.04
28 29 4.083862 GTCCACCAGGCCCTCGAC 62.084 72.222 0.00 0.00 33.74 4.20
46 47 3.719214 GGCGCCACCGATCTAAAG 58.281 61.111 24.80 0.00 36.29 1.85
47 48 2.534903 GGCGCCACCGATCTAAAGC 61.535 63.158 24.80 0.00 36.29 3.51
48 49 2.534903 GCGCCACCGATCTAAAGCC 61.535 63.158 0.00 0.00 36.29 4.35
49 50 1.153449 CGCCACCGATCTAAAGCCA 60.153 57.895 0.00 0.00 36.29 4.75
50 51 1.154205 CGCCACCGATCTAAAGCCAG 61.154 60.000 0.00 0.00 36.29 4.85
51 52 0.178068 GCCACCGATCTAAAGCCAGA 59.822 55.000 0.00 0.00 0.00 3.86
52 53 1.202698 GCCACCGATCTAAAGCCAGAT 60.203 52.381 0.00 0.00 37.99 2.90
53 54 2.487934 CCACCGATCTAAAGCCAGATG 58.512 52.381 0.00 0.00 35.37 2.90
54 55 2.103094 CCACCGATCTAAAGCCAGATGA 59.897 50.000 0.00 0.00 35.37 2.92
55 56 3.126831 CACCGATCTAAAGCCAGATGAC 58.873 50.000 0.00 0.00 35.37 3.06
56 57 2.766263 ACCGATCTAAAGCCAGATGACA 59.234 45.455 0.00 0.00 35.37 3.58
57 58 3.389329 ACCGATCTAAAGCCAGATGACAT 59.611 43.478 0.00 0.00 35.37 3.06
58 59 3.744942 CCGATCTAAAGCCAGATGACATG 59.255 47.826 0.00 0.00 35.37 3.21
59 60 4.375272 CGATCTAAAGCCAGATGACATGT 58.625 43.478 0.00 0.00 35.37 3.21
60 61 4.447054 CGATCTAAAGCCAGATGACATGTC 59.553 45.833 19.27 19.27 35.37 3.06
61 62 3.785486 TCTAAAGCCAGATGACATGTCG 58.215 45.455 20.54 7.30 0.00 4.35
62 63 1.089920 AAAGCCAGATGACATGTCGC 58.910 50.000 20.54 16.46 0.00 5.19
63 64 0.745845 AAGCCAGATGACATGTCGCC 60.746 55.000 20.54 14.16 0.00 5.54
64 65 2.528743 GCCAGATGACATGTCGCCG 61.529 63.158 20.54 9.03 0.00 6.46
65 66 1.141665 CCAGATGACATGTCGCCGA 59.858 57.895 20.54 3.64 0.00 5.54
66 67 0.460109 CCAGATGACATGTCGCCGAA 60.460 55.000 20.54 3.25 0.00 4.30
67 68 0.926155 CAGATGACATGTCGCCGAAG 59.074 55.000 20.54 5.08 0.00 3.79
68 69 0.817654 AGATGACATGTCGCCGAAGA 59.182 50.000 20.54 1.72 0.00 2.87
69 70 0.924090 GATGACATGTCGCCGAAGAC 59.076 55.000 20.54 3.73 41.30 3.01
70 71 0.460284 ATGACATGTCGCCGAAGACC 60.460 55.000 20.54 0.00 40.26 3.85
71 72 2.126071 ACATGTCGCCGAAGACCG 60.126 61.111 0.00 2.70 40.26 4.79
72 73 2.126071 CATGTCGCCGAAGACCGT 60.126 61.111 0.00 0.00 40.26 4.83
73 74 1.138036 CATGTCGCCGAAGACCGTA 59.862 57.895 0.00 0.00 40.26 4.02
74 75 0.248907 CATGTCGCCGAAGACCGTAT 60.249 55.000 0.00 0.00 40.26 3.06
75 76 0.030369 ATGTCGCCGAAGACCGTATC 59.970 55.000 0.00 0.00 40.26 2.24
76 77 1.653533 GTCGCCGAAGACCGTATCG 60.654 63.158 0.00 0.35 38.74 2.92
77 78 3.022914 CGCCGAAGACCGTATCGC 61.023 66.667 1.59 0.00 37.73 4.58
78 79 3.022914 GCCGAAGACCGTATCGCG 61.023 66.667 0.00 0.00 37.73 5.87
79 80 3.022914 CCGAAGACCGTATCGCGC 61.023 66.667 0.00 0.00 39.71 6.86
80 81 3.022914 CGAAGACCGTATCGCGCC 61.023 66.667 0.00 0.00 39.71 6.53
81 82 3.022914 GAAGACCGTATCGCGCCG 61.023 66.667 0.00 3.10 39.71 6.46
102 103 4.856801 CCCGATCCAGGCCAACCG 62.857 72.222 5.01 0.29 42.76 4.44
151 152 4.700365 GCCGCCGTCAAAGCCAAC 62.700 66.667 0.00 0.00 0.00 3.77
152 153 4.383602 CCGCCGTCAAAGCCAACG 62.384 66.667 0.00 0.00 38.58 4.10
154 155 4.700365 GCCGTCAAAGCCAACGCC 62.700 66.667 0.00 0.00 37.56 5.68
155 156 4.383602 CCGTCAAAGCCAACGCCG 62.384 66.667 0.00 0.00 37.56 6.46
156 157 3.645975 CGTCAAAGCCAACGCCGT 61.646 61.111 0.00 0.00 34.57 5.68
157 158 2.251371 GTCAAAGCCAACGCCGTC 59.749 61.111 0.00 0.00 34.57 4.79
158 159 3.342627 TCAAAGCCAACGCCGTCG 61.343 61.111 0.00 0.00 42.43 5.12
164 165 2.126228 CCAACGCCGTCGCTTCTA 60.126 61.111 0.00 0.00 39.84 2.10
165 166 2.158959 CCAACGCCGTCGCTTCTAG 61.159 63.158 0.00 0.00 39.84 2.43
166 167 1.154093 CAACGCCGTCGCTTCTAGA 60.154 57.895 0.00 0.00 39.84 2.43
167 168 0.525668 CAACGCCGTCGCTTCTAGAT 60.526 55.000 0.00 0.00 39.84 1.98
168 169 0.248539 AACGCCGTCGCTTCTAGATC 60.249 55.000 0.00 0.00 39.84 2.75
169 170 1.722852 CGCCGTCGCTTCTAGATCG 60.723 63.158 8.19 8.19 0.00 3.69
170 171 1.370657 GCCGTCGCTTCTAGATCGG 60.371 63.158 12.92 12.90 40.72 4.18
171 172 1.370657 CCGTCGCTTCTAGATCGGC 60.371 63.158 12.92 10.93 0.00 5.54
172 173 1.370657 CGTCGCTTCTAGATCGGCC 60.371 63.158 12.08 0.00 0.00 6.13
173 174 1.370657 GTCGCTTCTAGATCGGCCG 60.371 63.158 22.12 22.12 0.00 6.13
174 175 2.731348 CGCTTCTAGATCGGCCGC 60.731 66.667 23.51 7.63 0.00 6.53
175 176 2.417516 GCTTCTAGATCGGCCGCA 59.582 61.111 23.51 10.36 0.00 5.69
176 177 1.951631 GCTTCTAGATCGGCCGCAC 60.952 63.158 23.51 16.80 0.00 5.34
177 178 1.300233 CTTCTAGATCGGCCGCACC 60.300 63.158 23.51 11.86 0.00 5.01
178 179 1.739338 CTTCTAGATCGGCCGCACCT 61.739 60.000 23.51 18.72 35.61 4.00
179 180 1.735376 TTCTAGATCGGCCGCACCTC 61.735 60.000 23.51 14.17 35.61 3.85
180 181 3.214250 CTAGATCGGCCGCACCTCC 62.214 68.421 23.51 5.20 35.61 4.30
189 190 3.049674 CGCACCTCCACGCATGTT 61.050 61.111 0.00 0.00 0.00 2.71
190 191 2.562912 GCACCTCCACGCATGTTG 59.437 61.111 0.00 0.00 0.00 3.33
191 192 2.981560 GCACCTCCACGCATGTTGG 61.982 63.158 8.76 8.76 0.00 3.77
192 193 2.034066 ACCTCCACGCATGTTGGG 59.966 61.111 13.70 4.38 36.28 4.12
193 194 2.751436 CCTCCACGCATGTTGGGG 60.751 66.667 13.70 11.01 34.28 4.96
194 195 3.443045 CTCCACGCATGTTGGGGC 61.443 66.667 13.70 0.00 34.28 5.80
211 212 3.793888 CCCCGCCACCCCTAAGAC 61.794 72.222 0.00 0.00 0.00 3.01
212 213 4.157120 CCCGCCACCCCTAAGACG 62.157 72.222 0.00 0.00 0.00 4.18
213 214 4.832608 CCGCCACCCCTAAGACGC 62.833 72.222 0.00 0.00 0.00 5.19
215 216 4.832608 GCCACCCCTAAGACGCGG 62.833 72.222 12.47 0.00 0.00 6.46
216 217 4.157120 CCACCCCTAAGACGCGGG 62.157 72.222 12.47 1.69 43.05 6.13
217 218 3.072468 CACCCCTAAGACGCGGGA 61.072 66.667 12.47 0.00 43.44 5.14
218 219 2.758737 ACCCCTAAGACGCGGGAG 60.759 66.667 12.47 1.03 43.44 4.30
219 220 3.537874 CCCCTAAGACGCGGGAGG 61.538 72.222 12.47 10.92 43.44 4.30
220 221 3.537874 CCCTAAGACGCGGGAGGG 61.538 72.222 18.56 18.56 43.44 4.30
229 230 3.855853 GCGGGAGGGAGGAAGAGC 61.856 72.222 0.00 0.00 0.00 4.09
230 231 3.157949 CGGGAGGGAGGAAGAGCC 61.158 72.222 0.00 0.00 0.00 4.70
231 232 2.770475 GGGAGGGAGGAAGAGCCC 60.770 72.222 0.00 0.00 45.04 5.19
232 233 2.770475 GGAGGGAGGAAGAGCCCC 60.770 72.222 0.00 0.00 45.89 5.80
233 234 2.770475 GAGGGAGGAAGAGCCCCC 60.770 72.222 0.00 0.00 45.89 5.40
234 235 4.806339 AGGGAGGAAGAGCCCCCG 62.806 72.222 0.00 0.00 46.35 5.73
287 288 3.695825 GGTGGGAGGAGGGGAGGA 61.696 72.222 0.00 0.00 0.00 3.71
288 289 2.041405 GTGGGAGGAGGGGAGGAG 60.041 72.222 0.00 0.00 0.00 3.69
289 290 3.368501 TGGGAGGAGGGGAGGAGG 61.369 72.222 0.00 0.00 0.00 4.30
290 291 3.036959 GGGAGGAGGGGAGGAGGA 61.037 72.222 0.00 0.00 0.00 3.71
291 292 2.416923 GGGAGGAGGGGAGGAGGAT 61.417 68.421 0.00 0.00 0.00 3.24
292 293 1.152139 GGAGGAGGGGAGGAGGATG 60.152 68.421 0.00 0.00 0.00 3.51
293 294 1.152139 GAGGAGGGGAGGAGGATGG 60.152 68.421 0.00 0.00 0.00 3.51
294 295 2.122189 GGAGGGGAGGAGGATGGG 60.122 72.222 0.00 0.00 0.00 4.00
295 296 2.851588 GAGGGGAGGAGGATGGGC 60.852 72.222 0.00 0.00 0.00 5.36
296 297 3.381049 AGGGGAGGAGGATGGGCT 61.381 66.667 0.00 0.00 0.00 5.19
297 298 2.027059 AGGGGAGGAGGATGGGCTA 61.027 63.158 0.00 0.00 0.00 3.93
298 299 1.537643 GGGGAGGAGGATGGGCTAG 60.538 68.421 0.00 0.00 0.00 3.42
299 300 1.537643 GGGAGGAGGATGGGCTAGG 60.538 68.421 0.00 0.00 0.00 3.02
300 301 2.220586 GGAGGAGGATGGGCTAGGC 61.221 68.421 8.00 8.00 0.00 3.93
324 325 4.176752 GCGGCTAGGGTTGGGGAG 62.177 72.222 0.00 0.00 0.00 4.30
325 326 4.176752 CGGCTAGGGTTGGGGAGC 62.177 72.222 0.00 0.00 0.00 4.70
384 385 4.102113 GGCACCATCCAGTTGCTT 57.898 55.556 0.00 0.00 0.00 3.91
385 386 1.885871 GGCACCATCCAGTTGCTTC 59.114 57.895 0.00 0.00 0.00 3.86
386 387 0.610232 GGCACCATCCAGTTGCTTCT 60.610 55.000 0.00 0.00 0.00 2.85
387 388 1.251251 GCACCATCCAGTTGCTTCTT 58.749 50.000 0.00 0.00 0.00 2.52
388 389 1.200948 GCACCATCCAGTTGCTTCTTC 59.799 52.381 0.00 0.00 0.00 2.87
389 390 2.507484 CACCATCCAGTTGCTTCTTCA 58.493 47.619 0.00 0.00 0.00 3.02
390 391 2.886523 CACCATCCAGTTGCTTCTTCAA 59.113 45.455 0.00 0.00 0.00 2.69
391 392 3.318839 CACCATCCAGTTGCTTCTTCAAA 59.681 43.478 0.00 0.00 0.00 2.69
549 551 4.213270 CACTAGCATTTTGGACGTTTCTGA 59.787 41.667 0.00 0.00 0.00 3.27
615 617 5.186797 GCTTGACCCTAGCTAGTCATGATAT 59.813 44.000 22.73 0.00 42.32 1.63
688 705 1.686800 GGGGCCTAGTGTACCCGAA 60.687 63.158 0.84 0.00 45.27 4.30
776 793 1.001633 TGCTAAACCGAGGTCAAGTCC 59.998 52.381 0.00 0.00 0.00 3.85
834 852 1.393603 GCCCAAGTGGAGGCTTAATC 58.606 55.000 0.00 0.00 46.14 1.75
855 873 5.817616 TCAAAGTGTTTTCTACGTCGATC 57.182 39.130 0.00 0.00 0.00 3.69
977 1013 6.448006 GTCAGTCAGTTACAATAGTGTGTCT 58.552 40.000 5.98 1.32 38.82 3.41
991 1027 2.682494 GTCTGGCGACCTGGGGTA 60.682 66.667 0.00 0.00 35.25 3.69
1356 1401 4.742201 CAGGTCGTGTGGCCGGAG 62.742 72.222 5.05 0.00 0.00 4.63
1362 1407 3.986006 GTGTGGCCGGAGTCGACA 61.986 66.667 19.50 0.00 39.00 4.35
1536 1598 1.146041 TGAGCCTCAGCAACACGTT 59.854 52.632 0.00 0.00 43.56 3.99
1596 1658 5.754782 AGACATATGCTTCCATGTAAACCA 58.245 37.500 1.58 0.00 35.55 3.67
1675 1737 8.610248 TGTACTAAAGCTGCAACAAAGTAATA 57.390 30.769 1.02 0.00 0.00 0.98
1692 1754 6.093617 AGTAATATGGATCGGGGAGAGTAT 57.906 41.667 0.00 0.00 0.00 2.12
1698 1760 5.546621 TGGATCGGGGAGAGTATAAAAAG 57.453 43.478 0.00 0.00 0.00 2.27
1704 1766 7.722949 TCGGGGAGAGTATAAAAAGTAAAGA 57.277 36.000 0.00 0.00 0.00 2.52
1705 1767 7.550712 TCGGGGAGAGTATAAAAAGTAAAGAC 58.449 38.462 0.00 0.00 0.00 3.01
1846 1909 7.947890 AGATGGTTCAGTTTATAAGGAAAACCA 59.052 33.333 18.76 18.76 46.25 3.67
1898 1962 6.054860 TCAGGAAAAACCAAATGAAAACCA 57.945 33.333 0.00 0.00 42.04 3.67
2220 2290 8.761689 ACATCCAAAATAAGGCTATTGTCAAAT 58.238 29.630 0.00 0.00 0.00 2.32
2329 2399 3.091545 ACCAATCCATGTGTTTAGGCTG 58.908 45.455 0.00 0.00 0.00 4.85
2941 3011 9.521503 TTAATCATTTGAAACGAAATTGACACA 57.478 25.926 0.00 0.00 0.00 3.72
2942 3012 6.804534 TCATTTGAAACGAAATTGACACAC 57.195 33.333 0.00 0.00 0.00 3.82
2943 3013 6.325596 TCATTTGAAACGAAATTGACACACA 58.674 32.000 0.00 0.00 0.00 3.72
2944 3014 6.977502 TCATTTGAAACGAAATTGACACACAT 59.022 30.769 0.00 0.00 0.00 3.21
2945 3015 6.566310 TTTGAAACGAAATTGACACACATG 57.434 33.333 0.00 0.00 0.00 3.21
2946 3016 4.041049 TGAAACGAAATTGACACACATGC 58.959 39.130 0.00 0.00 0.00 4.06
2951 3021 3.605056 CGAAATTGACACACATGCATGTC 59.395 43.478 29.23 19.23 44.56 3.06
2952 3022 3.581024 AATTGACACACATGCATGTCC 57.419 42.857 29.23 17.75 43.84 4.02
2965 3035 3.212377 ATGTCCCACATGCCCATTC 57.788 52.632 0.00 0.00 37.45 2.67
2966 3036 0.335705 ATGTCCCACATGCCCATTCA 59.664 50.000 0.00 0.00 37.45 2.57
2967 3037 0.335705 TGTCCCACATGCCCATTCAT 59.664 50.000 0.00 0.00 0.00 2.57
2968 3038 1.273154 TGTCCCACATGCCCATTCATT 60.273 47.619 0.00 0.00 0.00 2.57
2969 3039 1.137479 GTCCCACATGCCCATTCATTG 59.863 52.381 0.00 0.00 0.00 2.82
2970 3040 1.196911 CCCACATGCCCATTCATTGT 58.803 50.000 0.00 0.00 0.00 2.71
2971 3041 2.024560 TCCCACATGCCCATTCATTGTA 60.025 45.455 0.00 0.00 0.00 2.41
2972 3042 2.765135 CCCACATGCCCATTCATTGTAA 59.235 45.455 0.00 0.00 0.00 2.41
2973 3043 3.388676 CCCACATGCCCATTCATTGTAAT 59.611 43.478 0.00 0.00 0.00 1.89
2974 3044 4.373527 CCACATGCCCATTCATTGTAATG 58.626 43.478 0.00 0.00 36.74 1.90
2975 3045 4.141892 CCACATGCCCATTCATTGTAATGT 60.142 41.667 4.67 0.00 37.65 2.71
2976 3046 4.806775 CACATGCCCATTCATTGTAATGTG 59.193 41.667 4.67 0.00 37.65 3.21
2977 3047 4.710865 ACATGCCCATTCATTGTAATGTGA 59.289 37.500 4.67 0.00 37.65 3.58
2978 3048 5.364446 ACATGCCCATTCATTGTAATGTGAT 59.636 36.000 4.67 0.00 37.65 3.06
2979 3049 6.550481 ACATGCCCATTCATTGTAATGTGATA 59.450 34.615 4.67 0.00 37.65 2.15
2980 3050 6.638096 TGCCCATTCATTGTAATGTGATAG 57.362 37.500 4.67 0.00 37.65 2.08
2981 3051 6.128486 TGCCCATTCATTGTAATGTGATAGT 58.872 36.000 4.67 0.00 37.65 2.12
2982 3052 6.606796 TGCCCATTCATTGTAATGTGATAGTT 59.393 34.615 4.67 0.00 37.65 2.24
2983 3053 7.123997 TGCCCATTCATTGTAATGTGATAGTTT 59.876 33.333 4.67 0.00 37.65 2.66
2984 3054 7.436080 GCCCATTCATTGTAATGTGATAGTTTG 59.564 37.037 4.67 0.00 37.65 2.93
2985 3055 8.685427 CCCATTCATTGTAATGTGATAGTTTGA 58.315 33.333 4.67 0.00 37.65 2.69
2986 3056 9.726232 CCATTCATTGTAATGTGATAGTTTGAG 57.274 33.333 4.67 0.00 37.65 3.02
2987 3057 9.229784 CATTCATTGTAATGTGATAGTTTGAGC 57.770 33.333 4.67 0.00 37.65 4.26
2988 3058 7.920160 TCATTGTAATGTGATAGTTTGAGCA 57.080 32.000 4.67 0.00 37.65 4.26
2989 3059 8.334263 TCATTGTAATGTGATAGTTTGAGCAA 57.666 30.769 4.67 0.00 37.65 3.91
2990 3060 8.959548 TCATTGTAATGTGATAGTTTGAGCAAT 58.040 29.630 4.67 0.00 37.65 3.56
2991 3061 9.016623 CATTGTAATGTGATAGTTTGAGCAATG 57.983 33.333 0.00 0.00 34.60 2.82
2992 3062 7.686438 TGTAATGTGATAGTTTGAGCAATGT 57.314 32.000 0.00 0.00 0.00 2.71
2993 3063 8.785329 TGTAATGTGATAGTTTGAGCAATGTA 57.215 30.769 0.00 0.00 0.00 2.29
2994 3064 9.394767 TGTAATGTGATAGTTTGAGCAATGTAT 57.605 29.630 0.00 0.00 0.00 2.29
2995 3065 9.869844 GTAATGTGATAGTTTGAGCAATGTATC 57.130 33.333 0.00 0.00 0.00 2.24
2996 3066 8.510243 AATGTGATAGTTTGAGCAATGTATCA 57.490 30.769 9.33 9.33 0.00 2.15
2997 3067 7.920160 TGTGATAGTTTGAGCAATGTATCAA 57.080 32.000 12.75 0.09 32.16 2.57
2998 3068 7.977904 TGTGATAGTTTGAGCAATGTATCAAG 58.022 34.615 12.75 0.00 36.81 3.02
2999 3069 7.607607 TGTGATAGTTTGAGCAATGTATCAAGT 59.392 33.333 12.75 0.41 36.81 3.16
3000 3070 8.119226 GTGATAGTTTGAGCAATGTATCAAGTC 58.881 37.037 12.75 3.04 36.81 3.01
3001 3071 5.886960 AGTTTGAGCAATGTATCAAGTCC 57.113 39.130 3.92 0.00 36.81 3.85
3002 3072 5.564550 AGTTTGAGCAATGTATCAAGTCCT 58.435 37.500 3.92 0.89 36.81 3.85
3003 3073 5.645497 AGTTTGAGCAATGTATCAAGTCCTC 59.355 40.000 3.92 0.00 36.81 3.71
3004 3074 4.824479 TGAGCAATGTATCAAGTCCTCA 57.176 40.909 0.00 0.00 0.00 3.86
3005 3075 5.164620 TGAGCAATGTATCAAGTCCTCAA 57.835 39.130 0.00 0.00 0.00 3.02
3006 3076 5.559770 TGAGCAATGTATCAAGTCCTCAAA 58.440 37.500 0.00 0.00 0.00 2.69
3007 3077 6.003326 TGAGCAATGTATCAAGTCCTCAAAA 58.997 36.000 0.00 0.00 0.00 2.44
3008 3078 6.489700 TGAGCAATGTATCAAGTCCTCAAAAA 59.510 34.615 0.00 0.00 0.00 1.94
3009 3079 6.917533 AGCAATGTATCAAGTCCTCAAAAAG 58.082 36.000 0.00 0.00 0.00 2.27
3026 3096 8.442632 CTCAAAAAGGATCATAGCAGTATGAA 57.557 34.615 0.00 0.00 46.53 2.57
3027 3097 8.985315 TCAAAAAGGATCATAGCAGTATGAAT 57.015 30.769 0.00 0.00 46.53 2.57
3028 3098 9.412460 TCAAAAAGGATCATAGCAGTATGAATT 57.588 29.630 0.00 0.00 46.53 2.17
3034 3104 9.458727 AGGATCATAGCAGTATGAATTAAATGG 57.541 33.333 0.00 0.00 46.53 3.16
3035 3105 8.186821 GGATCATAGCAGTATGAATTAAATGGC 58.813 37.037 0.00 0.00 46.53 4.40
3036 3106 8.640063 ATCATAGCAGTATGAATTAAATGGCA 57.360 30.769 0.00 0.00 46.53 4.92
3037 3107 8.640063 TCATAGCAGTATGAATTAAATGGCAT 57.360 30.769 0.00 0.00 41.79 4.40
3038 3108 9.737844 TCATAGCAGTATGAATTAAATGGCATA 57.262 29.630 0.00 0.00 41.79 3.14
3041 3111 8.469309 AGCAGTATGAATTAAATGGCATAACT 57.531 30.769 0.00 0.00 39.69 2.24
3042 3112 8.571336 AGCAGTATGAATTAAATGGCATAACTC 58.429 33.333 0.00 0.00 39.69 3.01
3043 3113 8.352201 GCAGTATGAATTAAATGGCATAACTCA 58.648 33.333 0.00 0.00 39.69 3.41
3061 3131 9.453572 CATAACTCATGCATAACATACCCTATT 57.546 33.333 0.00 0.00 36.64 1.73
3063 3133 8.848474 AACTCATGCATAACATACCCTATTAC 57.152 34.615 0.00 0.00 36.64 1.89
3064 3134 8.207350 ACTCATGCATAACATACCCTATTACT 57.793 34.615 0.00 0.00 36.64 2.24
3065 3135 9.321532 ACTCATGCATAACATACCCTATTACTA 57.678 33.333 0.00 0.00 36.64 1.82
3067 3137 9.938280 TCATGCATAACATACCCTATTACTAAC 57.062 33.333 0.00 0.00 36.64 2.34
3068 3138 9.944376 CATGCATAACATACCCTATTACTAACT 57.056 33.333 0.00 0.00 36.64 2.24
3070 3140 9.772973 TGCATAACATACCCTATTACTAACTTG 57.227 33.333 0.00 0.00 0.00 3.16
3071 3141 9.774413 GCATAACATACCCTATTACTAACTTGT 57.226 33.333 0.00 0.00 0.00 3.16
3074 3144 6.589135 ACATACCCTATTACTAACTTGTGGC 58.411 40.000 0.00 0.00 0.00 5.01
3075 3145 4.498894 ACCCTATTACTAACTTGTGGCC 57.501 45.455 0.00 0.00 0.00 5.36
3076 3146 3.201487 ACCCTATTACTAACTTGTGGCCC 59.799 47.826 0.00 0.00 0.00 5.80
3077 3147 3.201266 CCCTATTACTAACTTGTGGCCCA 59.799 47.826 0.00 0.00 0.00 5.36
3078 3148 4.141251 CCCTATTACTAACTTGTGGCCCAT 60.141 45.833 0.00 0.00 0.00 4.00
3079 3149 5.072600 CCCTATTACTAACTTGTGGCCCATA 59.927 44.000 0.00 0.00 0.00 2.74
3080 3150 6.240176 CCCTATTACTAACTTGTGGCCCATAT 60.240 42.308 0.00 0.00 0.00 1.78
3081 3151 6.879458 CCTATTACTAACTTGTGGCCCATATC 59.121 42.308 0.00 0.00 0.00 1.63
3082 3152 5.702065 TTACTAACTTGTGGCCCATATCA 57.298 39.130 0.00 0.00 0.00 2.15
3083 3153 4.156455 ACTAACTTGTGGCCCATATCAG 57.844 45.455 0.00 0.00 0.00 2.90
3084 3154 3.523564 ACTAACTTGTGGCCCATATCAGT 59.476 43.478 0.00 0.00 0.00 3.41
3085 3155 3.456380 AACTTGTGGCCCATATCAGTT 57.544 42.857 0.00 1.90 0.00 3.16
3086 3156 4.584638 AACTTGTGGCCCATATCAGTTA 57.415 40.909 0.00 0.00 0.00 2.24
3087 3157 4.156455 ACTTGTGGCCCATATCAGTTAG 57.844 45.455 0.00 0.00 0.00 2.34
3088 3158 2.638480 TGTGGCCCATATCAGTTAGC 57.362 50.000 0.00 0.00 0.00 3.09
3089 3159 2.126882 TGTGGCCCATATCAGTTAGCT 58.873 47.619 0.00 0.00 0.00 3.32
3090 3160 2.104792 TGTGGCCCATATCAGTTAGCTC 59.895 50.000 0.00 0.00 0.00 4.09
3091 3161 2.104792 GTGGCCCATATCAGTTAGCTCA 59.895 50.000 0.00 0.00 0.00 4.26
3092 3162 2.981784 TGGCCCATATCAGTTAGCTCAT 59.018 45.455 0.00 0.00 0.00 2.90
3093 3163 3.244665 TGGCCCATATCAGTTAGCTCATG 60.245 47.826 0.00 0.00 0.00 3.07
3094 3164 3.008375 GGCCCATATCAGTTAGCTCATGA 59.992 47.826 0.00 0.00 0.00 3.07
3095 3165 4.324099 GGCCCATATCAGTTAGCTCATGAT 60.324 45.833 11.60 11.60 37.44 2.45
3096 3166 5.104776 GGCCCATATCAGTTAGCTCATGATA 60.105 44.000 14.37 14.37 39.53 2.15
3097 3167 6.409005 GGCCCATATCAGTTAGCTCATGATAT 60.409 42.308 16.68 16.68 43.88 1.63
3098 3168 6.705381 GCCCATATCAGTTAGCTCATGATATC 59.295 42.308 18.41 0.00 42.13 1.63
3099 3169 7.634429 GCCCATATCAGTTAGCTCATGATATCA 60.634 40.741 18.41 8.10 42.13 2.15
3100 3170 8.430431 CCCATATCAGTTAGCTCATGATATCAT 58.570 37.037 12.62 12.62 42.13 2.45
3101 3171 9.833917 CCATATCAGTTAGCTCATGATATCATT 57.166 33.333 15.74 4.26 42.13 2.57
3105 3175 9.788889 ATCAGTTAGCTCATGATATCATTTTCA 57.211 29.630 15.74 0.02 33.61 2.69
3106 3176 9.617523 TCAGTTAGCTCATGATATCATTTTCAA 57.382 29.630 15.74 4.32 33.61 2.69
3107 3177 9.880064 CAGTTAGCTCATGATATCATTTTCAAG 57.120 33.333 15.74 9.27 33.61 3.02
3108 3178 9.624373 AGTTAGCTCATGATATCATTTTCAAGT 57.376 29.630 15.74 6.84 33.61 3.16
3111 3181 7.201145 AGCTCATGATATCATTTTCAAGTTGC 58.799 34.615 15.74 11.46 33.61 4.17
3112 3182 7.068348 AGCTCATGATATCATTTTCAAGTTGCT 59.932 33.333 15.74 13.11 33.61 3.91
3113 3183 7.378995 GCTCATGATATCATTTTCAAGTTGCTC 59.621 37.037 15.74 0.00 33.61 4.26
3114 3184 7.709947 TCATGATATCATTTTCAAGTTGCTCC 58.290 34.615 15.74 0.00 33.61 4.70
3115 3185 7.339976 TCATGATATCATTTTCAAGTTGCTCCA 59.660 33.333 15.74 0.00 33.61 3.86
3116 3186 6.855836 TGATATCATTTTCAAGTTGCTCCAC 58.144 36.000 0.00 0.00 0.00 4.02
3117 3187 4.525912 ATCATTTTCAAGTTGCTCCACC 57.474 40.909 0.00 0.00 0.00 4.61
3118 3188 2.627699 TCATTTTCAAGTTGCTCCACCC 59.372 45.455 0.00 0.00 0.00 4.61
3119 3189 2.151502 TTTTCAAGTTGCTCCACCCA 57.848 45.000 0.00 0.00 0.00 4.51
3120 3190 1.691196 TTTCAAGTTGCTCCACCCAG 58.309 50.000 0.00 0.00 0.00 4.45
3121 3191 0.843309 TTCAAGTTGCTCCACCCAGA 59.157 50.000 0.00 0.00 0.00 3.86
3122 3192 0.843309 TCAAGTTGCTCCACCCAGAA 59.157 50.000 0.00 0.00 0.00 3.02
3123 3193 1.214175 TCAAGTTGCTCCACCCAGAAA 59.786 47.619 0.00 0.00 0.00 2.52
3124 3194 1.338020 CAAGTTGCTCCACCCAGAAAC 59.662 52.381 0.00 0.00 32.52 2.78
3125 3195 0.846693 AGTTGCTCCACCCAGAAACT 59.153 50.000 0.00 0.00 37.43 2.66
3126 3196 2.054799 AGTTGCTCCACCCAGAAACTA 58.945 47.619 0.00 0.00 40.11 2.24
3127 3197 2.441750 AGTTGCTCCACCCAGAAACTAA 59.558 45.455 0.00 0.00 40.11 2.24
3128 3198 3.117663 AGTTGCTCCACCCAGAAACTAAA 60.118 43.478 0.00 0.00 40.11 1.85
3129 3199 3.140325 TGCTCCACCCAGAAACTAAAG 57.860 47.619 0.00 0.00 0.00 1.85
3130 3200 2.441750 TGCTCCACCCAGAAACTAAAGT 59.558 45.455 0.00 0.00 0.00 2.66
3131 3201 3.649023 TGCTCCACCCAGAAACTAAAGTA 59.351 43.478 0.00 0.00 0.00 2.24
3132 3202 4.288626 TGCTCCACCCAGAAACTAAAGTAT 59.711 41.667 0.00 0.00 0.00 2.12
3133 3203 4.876679 GCTCCACCCAGAAACTAAAGTATC 59.123 45.833 0.00 0.00 0.00 2.24
3134 3204 5.429130 CTCCACCCAGAAACTAAAGTATCC 58.571 45.833 0.00 0.00 0.00 2.59
3135 3205 4.226620 TCCACCCAGAAACTAAAGTATCCC 59.773 45.833 0.00 0.00 0.00 3.85
3136 3206 4.018779 CCACCCAGAAACTAAAGTATCCCA 60.019 45.833 0.00 0.00 0.00 4.37
3137 3207 4.941873 CACCCAGAAACTAAAGTATCCCAC 59.058 45.833 0.00 0.00 0.00 4.61
3138 3208 4.600111 ACCCAGAAACTAAAGTATCCCACA 59.400 41.667 0.00 0.00 0.00 4.17
3139 3209 5.253096 ACCCAGAAACTAAAGTATCCCACAT 59.747 40.000 0.00 0.00 0.00 3.21
3189 3259 8.994429 TTTTCAAGTTCAAGAAGCACATAAAA 57.006 26.923 0.00 0.00 0.00 1.52
3248 3318 0.743688 TGTGCGTTTTCTTGGCATGT 59.256 45.000 0.00 0.00 39.14 3.21
3288 3359 4.402474 GTGCTAACCAATTCCCTTATTGCT 59.598 41.667 0.00 0.00 34.81 3.91
3307 3378 7.692460 ATTGCTCTTTTGATACAGTGAATGA 57.308 32.000 0.00 0.00 0.00 2.57
3410 3481 9.655769 CTATTGCTGAATGTGTATTTGTATCAC 57.344 33.333 0.00 0.00 0.00 3.06
3476 4957 4.616835 GCTGGTCTGTTTTCACCATCAATC 60.617 45.833 0.00 0.00 0.00 2.67
3512 4993 8.454106 ACATTTGTGCTACAAGAATAGCTAAAG 58.546 33.333 0.00 0.00 46.54 1.85
3529 5010 5.985530 AGCTAAAGGTTTGTTGCTTCAATTC 59.014 36.000 0.00 0.00 0.00 2.17
3541 5022 3.551082 TGCTTCAATTCACGCAAAAAGTG 59.449 39.130 0.00 0.00 40.71 3.16
3579 5107 5.695851 AAGTTAAGTTCATGCTCAAGTGG 57.304 39.130 0.00 0.00 0.00 4.00
3580 5108 4.718961 AGTTAAGTTCATGCTCAAGTGGT 58.281 39.130 0.00 0.00 0.00 4.16
3581 5109 5.133221 AGTTAAGTTCATGCTCAAGTGGTT 58.867 37.500 0.00 0.00 0.00 3.67
3582 5110 6.296026 AGTTAAGTTCATGCTCAAGTGGTTA 58.704 36.000 0.00 0.00 0.00 2.85
3583 5111 6.204882 AGTTAAGTTCATGCTCAAGTGGTTAC 59.795 38.462 0.00 0.00 0.00 2.50
3584 5112 3.412386 AGTTCATGCTCAAGTGGTTACC 58.588 45.455 0.00 0.00 0.00 2.85
3585 5113 3.073062 AGTTCATGCTCAAGTGGTTACCT 59.927 43.478 2.07 0.00 0.00 3.08
3586 5114 3.057969 TCATGCTCAAGTGGTTACCTG 57.942 47.619 2.07 0.00 0.00 4.00
3587 5115 2.086869 CATGCTCAAGTGGTTACCTGG 58.913 52.381 2.07 0.00 0.00 4.45
3588 5116 1.429930 TGCTCAAGTGGTTACCTGGA 58.570 50.000 0.00 0.00 0.00 3.86
3589 5117 1.985159 TGCTCAAGTGGTTACCTGGAT 59.015 47.619 0.00 0.00 0.00 3.41
3590 5118 2.027192 TGCTCAAGTGGTTACCTGGATC 60.027 50.000 0.00 0.00 0.00 3.36
3591 5119 2.893637 CTCAAGTGGTTACCTGGATCG 58.106 52.381 0.00 0.00 0.00 3.69
3592 5120 2.496070 CTCAAGTGGTTACCTGGATCGA 59.504 50.000 0.00 0.00 0.00 3.59
3593 5121 3.104512 TCAAGTGGTTACCTGGATCGAT 58.895 45.455 0.00 0.00 0.00 3.59
3594 5122 3.517901 TCAAGTGGTTACCTGGATCGATT 59.482 43.478 0.00 0.00 0.00 3.34
3595 5123 3.543680 AGTGGTTACCTGGATCGATTG 57.456 47.619 0.00 0.00 0.00 2.67
3596 5124 3.104512 AGTGGTTACCTGGATCGATTGA 58.895 45.455 0.00 0.00 0.00 2.57
3597 5125 3.711704 AGTGGTTACCTGGATCGATTGAT 59.288 43.478 0.00 0.00 37.60 2.57
3598 5126 3.809832 GTGGTTACCTGGATCGATTGATG 59.190 47.826 0.00 0.00 34.09 3.07
3599 5127 3.454447 TGGTTACCTGGATCGATTGATGT 59.546 43.478 0.00 0.00 34.09 3.06
3600 5128 4.651962 TGGTTACCTGGATCGATTGATGTA 59.348 41.667 0.00 0.00 34.09 2.29
3601 5129 5.129650 TGGTTACCTGGATCGATTGATGTAA 59.870 40.000 0.00 3.65 34.09 2.41
3602 5130 6.183361 TGGTTACCTGGATCGATTGATGTAAT 60.183 38.462 0.00 0.00 34.09 1.89
3603 5131 7.015779 TGGTTACCTGGATCGATTGATGTAATA 59.984 37.037 0.00 0.00 34.09 0.98
3604 5132 7.545965 GGTTACCTGGATCGATTGATGTAATAG 59.454 40.741 0.00 0.00 34.09 1.73
3605 5133 5.482908 ACCTGGATCGATTGATGTAATAGC 58.517 41.667 0.00 0.00 34.09 2.97
3606 5134 4.872691 CCTGGATCGATTGATGTAATAGCC 59.127 45.833 0.00 0.00 34.09 3.93
3607 5135 4.494484 TGGATCGATTGATGTAATAGCCG 58.506 43.478 0.00 0.00 34.09 5.52
3608 5136 4.021456 TGGATCGATTGATGTAATAGCCGT 60.021 41.667 0.00 0.00 34.09 5.68
3609 5137 4.929808 GGATCGATTGATGTAATAGCCGTT 59.070 41.667 0.00 0.00 34.09 4.44
3610 5138 6.097356 GGATCGATTGATGTAATAGCCGTTA 58.903 40.000 0.00 0.00 34.09 3.18
3611 5139 6.253727 GGATCGATTGATGTAATAGCCGTTAG 59.746 42.308 0.00 0.00 34.09 2.34
3612 5140 6.321848 TCGATTGATGTAATAGCCGTTAGA 57.678 37.500 0.00 0.00 0.00 2.10
3613 5141 6.741109 TCGATTGATGTAATAGCCGTTAGAA 58.259 36.000 0.00 0.00 0.00 2.10
3614 5142 7.375834 TCGATTGATGTAATAGCCGTTAGAAT 58.624 34.615 0.00 0.00 0.00 2.40
3615 5143 8.517056 TCGATTGATGTAATAGCCGTTAGAATA 58.483 33.333 0.00 0.00 0.00 1.75
3616 5144 9.135843 CGATTGATGTAATAGCCGTTAGAATAA 57.864 33.333 0.00 0.00 0.00 1.40
3626 5154 9.893305 AATAGCCGTTAGAATAAAAATATGTGC 57.107 29.630 0.00 0.00 0.00 4.57
3627 5155 7.328277 AGCCGTTAGAATAAAAATATGTGCA 57.672 32.000 0.00 0.00 0.00 4.57
3628 5156 7.767261 AGCCGTTAGAATAAAAATATGTGCAA 58.233 30.769 0.00 0.00 0.00 4.08
3629 5157 8.247562 AGCCGTTAGAATAAAAATATGTGCAAA 58.752 29.630 0.00 0.00 0.00 3.68
3630 5158 8.865001 GCCGTTAGAATAAAAATATGTGCAAAA 58.135 29.630 0.00 0.00 0.00 2.44
3641 5169 7.671495 AAATATGTGCAAAATTGTTTCTCCC 57.329 32.000 0.00 0.00 0.00 4.30
3642 5170 3.467374 TGTGCAAAATTGTTTCTCCCC 57.533 42.857 0.00 0.00 0.00 4.81
3643 5171 2.223923 TGTGCAAAATTGTTTCTCCCCG 60.224 45.455 0.00 0.00 0.00 5.73
3644 5172 2.035632 TGCAAAATTGTTTCTCCCCGT 58.964 42.857 0.00 0.00 0.00 5.28
3645 5173 2.223923 TGCAAAATTGTTTCTCCCCGTG 60.224 45.455 0.00 0.00 0.00 4.94
3646 5174 2.403259 CAAAATTGTTTCTCCCCGTGC 58.597 47.619 0.00 0.00 0.00 5.34
3647 5175 1.995376 AAATTGTTTCTCCCCGTGCT 58.005 45.000 0.00 0.00 0.00 4.40
3648 5176 1.995376 AATTGTTTCTCCCCGTGCTT 58.005 45.000 0.00 0.00 0.00 3.91
3649 5177 1.534729 ATTGTTTCTCCCCGTGCTTC 58.465 50.000 0.00 0.00 0.00 3.86
3650 5178 0.472471 TTGTTTCTCCCCGTGCTTCT 59.528 50.000 0.00 0.00 0.00 2.85
3651 5179 0.472471 TGTTTCTCCCCGTGCTTCTT 59.528 50.000 0.00 0.00 0.00 2.52
3652 5180 1.157585 GTTTCTCCCCGTGCTTCTTC 58.842 55.000 0.00 0.00 0.00 2.87
3653 5181 0.036306 TTTCTCCCCGTGCTTCTTCC 59.964 55.000 0.00 0.00 0.00 3.46
3654 5182 0.836400 TTCTCCCCGTGCTTCTTCCT 60.836 55.000 0.00 0.00 0.00 3.36
3655 5183 1.219393 CTCCCCGTGCTTCTTCCTC 59.781 63.158 0.00 0.00 0.00 3.71
3656 5184 1.229209 TCCCCGTGCTTCTTCCTCT 60.229 57.895 0.00 0.00 0.00 3.69
3657 5185 1.219393 CCCCGTGCTTCTTCCTCTC 59.781 63.158 0.00 0.00 0.00 3.20
3658 5186 1.219393 CCCGTGCTTCTTCCTCTCC 59.781 63.158 0.00 0.00 0.00 3.71
3659 5187 1.544825 CCCGTGCTTCTTCCTCTCCA 61.545 60.000 0.00 0.00 0.00 3.86
3660 5188 0.108424 CCGTGCTTCTTCCTCTCCAG 60.108 60.000 0.00 0.00 0.00 3.86
3661 5189 0.739112 CGTGCTTCTTCCTCTCCAGC 60.739 60.000 0.00 0.00 0.00 4.85
3669 5197 1.536073 TTCCTCTCCAGCTGTCACGG 61.536 60.000 13.81 7.92 0.00 4.94
3777 5305 9.911788 AATATCTTGGTCACAGAAGACAAATAT 57.088 29.630 0.00 0.00 40.29 1.28
3959 5488 1.934220 CTACAGCCCTTCGAGCGTCA 61.934 60.000 0.00 0.00 34.64 4.35
4051 5584 2.363795 CGGGGCTGACTGGGACTA 60.364 66.667 0.00 0.00 0.00 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 2.674380 CCTGGTGGACTGCTTGGC 60.674 66.667 0.00 0.00 34.57 4.52
5 6 2.674380 GGCCTGGTGGACTGCTTG 60.674 66.667 0.00 0.00 38.69 4.01
6 7 3.971702 GGGCCTGGTGGACTGCTT 61.972 66.667 0.84 0.00 42.43 3.91
7 8 4.990910 AGGGCCTGGTGGACTGCT 62.991 66.667 4.50 0.00 42.43 4.24
8 9 4.416738 GAGGGCCTGGTGGACTGC 62.417 72.222 12.95 0.00 42.43 4.40
9 10 4.087892 CGAGGGCCTGGTGGACTG 62.088 72.222 12.95 0.00 42.43 3.51
10 11 4.316823 TCGAGGGCCTGGTGGACT 62.317 66.667 12.95 0.00 42.43 3.85
11 12 4.083862 GTCGAGGGCCTGGTGGAC 62.084 72.222 12.95 9.38 41.93 4.02
29 30 2.534903 GCTTTAGATCGGTGGCGCC 61.535 63.158 22.73 22.73 0.00 6.53
30 31 2.534903 GGCTTTAGATCGGTGGCGC 61.535 63.158 0.00 0.00 0.00 6.53
31 32 1.153449 TGGCTTTAGATCGGTGGCG 60.153 57.895 0.00 0.00 0.00 5.69
32 33 0.178068 TCTGGCTTTAGATCGGTGGC 59.822 55.000 0.00 0.00 0.00 5.01
33 34 2.103094 TCATCTGGCTTTAGATCGGTGG 59.897 50.000 0.00 0.00 35.28 4.61
34 35 3.126831 GTCATCTGGCTTTAGATCGGTG 58.873 50.000 0.00 0.00 35.28 4.94
35 36 2.766263 TGTCATCTGGCTTTAGATCGGT 59.234 45.455 0.00 0.00 35.28 4.69
36 37 3.459232 TGTCATCTGGCTTTAGATCGG 57.541 47.619 0.00 0.00 35.28 4.18
37 38 4.375272 ACATGTCATCTGGCTTTAGATCG 58.625 43.478 0.00 0.00 35.28 3.69
38 39 4.447054 CGACATGTCATCTGGCTTTAGATC 59.553 45.833 24.93 0.00 35.28 2.75
39 40 4.375272 CGACATGTCATCTGGCTTTAGAT 58.625 43.478 24.93 0.00 37.90 1.98
40 41 3.785486 CGACATGTCATCTGGCTTTAGA 58.215 45.455 24.93 0.00 0.00 2.10
41 42 2.286294 GCGACATGTCATCTGGCTTTAG 59.714 50.000 24.93 5.71 0.00 1.85
42 43 2.279741 GCGACATGTCATCTGGCTTTA 58.720 47.619 24.93 0.00 0.00 1.85
43 44 1.089920 GCGACATGTCATCTGGCTTT 58.910 50.000 24.93 0.00 0.00 3.51
44 45 0.745845 GGCGACATGTCATCTGGCTT 60.746 55.000 24.93 0.00 0.00 4.35
45 46 1.153289 GGCGACATGTCATCTGGCT 60.153 57.895 24.93 0.00 0.00 4.75
46 47 2.528743 CGGCGACATGTCATCTGGC 61.529 63.158 24.93 18.34 0.00 4.85
47 48 0.460109 TTCGGCGACATGTCATCTGG 60.460 55.000 24.93 9.73 0.00 3.86
48 49 0.926155 CTTCGGCGACATGTCATCTG 59.074 55.000 24.93 19.13 0.00 2.90
49 50 0.817654 TCTTCGGCGACATGTCATCT 59.182 50.000 24.93 0.00 0.00 2.90
50 51 0.924090 GTCTTCGGCGACATGTCATC 59.076 55.000 24.93 15.28 34.11 2.92
51 52 0.460284 GGTCTTCGGCGACATGTCAT 60.460 55.000 24.93 0.00 35.63 3.06
52 53 1.080093 GGTCTTCGGCGACATGTCA 60.080 57.895 24.93 2.94 35.63 3.58
53 54 2.158959 CGGTCTTCGGCGACATGTC 61.159 63.158 16.21 16.21 35.63 3.06
54 55 1.588824 TACGGTCTTCGGCGACATGT 61.589 55.000 10.16 0.00 44.45 3.21
55 56 0.248907 ATACGGTCTTCGGCGACATG 60.249 55.000 10.16 2.90 44.45 3.21
56 57 0.030369 GATACGGTCTTCGGCGACAT 59.970 55.000 10.16 0.00 44.45 3.06
57 58 1.430632 GATACGGTCTTCGGCGACA 59.569 57.895 10.16 0.00 44.45 4.35
58 59 1.653533 CGATACGGTCTTCGGCGAC 60.654 63.158 10.16 0.00 44.45 5.19
59 60 2.711311 CGATACGGTCTTCGGCGA 59.289 61.111 4.99 4.99 44.45 5.54
60 61 3.022914 GCGATACGGTCTTCGGCG 61.023 66.667 0.00 0.00 44.45 6.46
61 62 3.022914 CGCGATACGGTCTTCGGC 61.023 66.667 0.00 6.64 44.45 5.54
62 63 3.022914 GCGCGATACGGTCTTCGG 61.023 66.667 12.10 6.55 44.45 4.30
63 64 3.022914 GGCGCGATACGGTCTTCG 61.023 66.667 12.10 8.53 43.93 3.79
64 65 3.022914 CGGCGCGATACGGTCTTC 61.023 66.667 12.10 0.00 43.93 2.87
85 86 4.856801 CGGTTGGCCTGGATCGGG 62.857 72.222 3.32 0.00 0.00 5.14
134 135 4.700365 GTTGGCTTTGACGGCGGC 62.700 66.667 13.24 9.67 0.00 6.53
135 136 4.383602 CGTTGGCTTTGACGGCGG 62.384 66.667 13.24 0.00 35.74 6.13
138 139 4.383602 CGGCGTTGGCTTTGACGG 62.384 66.667 0.00 0.00 39.52 4.79
139 140 3.573489 GACGGCGTTGGCTTTGACG 62.573 63.158 16.19 0.00 41.89 4.35
140 141 2.251371 GACGGCGTTGGCTTTGAC 59.749 61.111 16.19 0.00 39.81 3.18
141 142 3.342627 CGACGGCGTTGGCTTTGA 61.343 61.111 19.51 0.00 39.81 2.69
147 148 2.126228 TAGAAGCGACGGCGTTGG 60.126 61.111 27.17 17.27 46.35 3.77
148 149 0.525668 ATCTAGAAGCGACGGCGTTG 60.526 55.000 22.69 22.69 46.35 4.10
149 150 0.248539 GATCTAGAAGCGACGGCGTT 60.249 55.000 16.19 1.65 46.35 4.84
150 151 1.355916 GATCTAGAAGCGACGGCGT 59.644 57.895 14.65 14.65 46.35 5.68
151 152 1.722852 CGATCTAGAAGCGACGGCG 60.723 63.158 6.12 6.12 46.35 6.46
152 153 1.370657 CCGATCTAGAAGCGACGGC 60.371 63.158 16.98 0.00 40.37 5.68
153 154 1.370657 GCCGATCTAGAAGCGACGG 60.371 63.158 16.98 16.35 42.63 4.79
154 155 1.370657 GGCCGATCTAGAAGCGACG 60.371 63.158 16.98 8.98 0.00 5.12
155 156 1.370657 CGGCCGATCTAGAAGCGAC 60.371 63.158 24.07 7.78 0.00 5.19
156 157 3.031495 CGGCCGATCTAGAAGCGA 58.969 61.111 24.07 0.00 0.00 4.93
157 158 2.731348 GCGGCCGATCTAGAAGCG 60.731 66.667 33.48 10.43 0.00 4.68
158 159 1.951631 GTGCGGCCGATCTAGAAGC 60.952 63.158 33.48 8.12 0.00 3.86
159 160 1.300233 GGTGCGGCCGATCTAGAAG 60.300 63.158 33.48 0.00 0.00 2.85
160 161 1.735376 GAGGTGCGGCCGATCTAGAA 61.735 60.000 33.48 0.69 43.70 2.10
161 162 2.123854 AGGTGCGGCCGATCTAGA 60.124 61.111 33.48 0.64 43.70 2.43
162 163 2.336809 GAGGTGCGGCCGATCTAG 59.663 66.667 33.48 0.00 43.70 2.43
163 164 3.224324 GGAGGTGCGGCCGATCTA 61.224 66.667 33.48 8.74 43.70 1.98
172 173 3.049674 AACATGCGTGGAGGTGCG 61.050 61.111 11.36 0.00 0.00 5.34
173 174 2.562912 CAACATGCGTGGAGGTGC 59.437 61.111 11.36 0.00 0.00 5.01
174 175 2.334946 CCCAACATGCGTGGAGGTG 61.335 63.158 15.96 2.78 0.00 4.00
175 176 2.034066 CCCAACATGCGTGGAGGT 59.966 61.111 15.96 0.00 0.00 3.85
176 177 2.751436 CCCCAACATGCGTGGAGG 60.751 66.667 15.96 11.12 0.00 4.30
177 178 3.443045 GCCCCAACATGCGTGGAG 61.443 66.667 15.96 5.50 0.00 3.86
194 195 3.793888 GTCTTAGGGGTGGCGGGG 61.794 72.222 0.00 0.00 0.00 5.73
195 196 4.157120 CGTCTTAGGGGTGGCGGG 62.157 72.222 0.00 0.00 0.00 6.13
196 197 4.832608 GCGTCTTAGGGGTGGCGG 62.833 72.222 0.00 0.00 0.00 6.13
198 199 4.832608 CCGCGTCTTAGGGGTGGC 62.833 72.222 4.92 0.00 39.15 5.01
199 200 4.157120 CCCGCGTCTTAGGGGTGG 62.157 72.222 4.92 0.00 43.90 4.61
204 205 2.441532 TCCCTCCCGCGTCTTAGG 60.442 66.667 4.92 5.83 0.00 2.69
205 206 2.491022 CCTCCCTCCCGCGTCTTAG 61.491 68.421 4.92 0.00 0.00 2.18
206 207 2.441532 CCTCCCTCCCGCGTCTTA 60.442 66.667 4.92 0.00 0.00 2.10
207 208 3.899545 TTCCTCCCTCCCGCGTCTT 62.900 63.158 4.92 0.00 0.00 3.01
208 209 4.377760 TTCCTCCCTCCCGCGTCT 62.378 66.667 4.92 0.00 0.00 4.18
209 210 3.839432 CTTCCTCCCTCCCGCGTC 61.839 72.222 4.92 0.00 0.00 5.19
210 211 4.377760 TCTTCCTCCCTCCCGCGT 62.378 66.667 4.92 0.00 0.00 6.01
211 212 3.532155 CTCTTCCTCCCTCCCGCG 61.532 72.222 0.00 0.00 0.00 6.46
212 213 3.855853 GCTCTTCCTCCCTCCCGC 61.856 72.222 0.00 0.00 0.00 6.13
213 214 3.157949 GGCTCTTCCTCCCTCCCG 61.158 72.222 0.00 0.00 0.00 5.14
214 215 2.770475 GGGCTCTTCCTCCCTCCC 60.770 72.222 0.00 0.00 39.46 4.30
215 216 2.770475 GGGGCTCTTCCTCCCTCC 60.770 72.222 0.00 0.00 42.25 4.30
270 271 3.695825 TCCTCCCCTCCTCCCACC 61.696 72.222 0.00 0.00 0.00 4.61
271 272 2.041405 CTCCTCCCCTCCTCCCAC 60.041 72.222 0.00 0.00 0.00 4.61
272 273 3.368501 CCTCCTCCCCTCCTCCCA 61.369 72.222 0.00 0.00 0.00 4.37
273 274 2.416923 ATCCTCCTCCCCTCCTCCC 61.417 68.421 0.00 0.00 0.00 4.30
274 275 1.152139 CATCCTCCTCCCCTCCTCC 60.152 68.421 0.00 0.00 0.00 4.30
275 276 1.152139 CCATCCTCCTCCCCTCCTC 60.152 68.421 0.00 0.00 0.00 3.71
276 277 2.731461 CCCATCCTCCTCCCCTCCT 61.731 68.421 0.00 0.00 0.00 3.69
277 278 2.122189 CCCATCCTCCTCCCCTCC 60.122 72.222 0.00 0.00 0.00 4.30
278 279 2.037304 TAGCCCATCCTCCTCCCCTC 62.037 65.000 0.00 0.00 0.00 4.30
279 280 2.027059 TAGCCCATCCTCCTCCCCT 61.027 63.158 0.00 0.00 0.00 4.79
280 281 1.537643 CTAGCCCATCCTCCTCCCC 60.538 68.421 0.00 0.00 0.00 4.81
281 282 1.537643 CCTAGCCCATCCTCCTCCC 60.538 68.421 0.00 0.00 0.00 4.30
282 283 2.220586 GCCTAGCCCATCCTCCTCC 61.221 68.421 0.00 0.00 0.00 4.30
283 284 2.220586 GGCCTAGCCCATCCTCCTC 61.221 68.421 0.00 0.00 44.06 3.71
284 285 2.122189 GGCCTAGCCCATCCTCCT 60.122 66.667 0.00 0.00 44.06 3.69
307 308 4.176752 CTCCCCAACCCTAGCCGC 62.177 72.222 0.00 0.00 0.00 6.53
308 309 4.176752 GCTCCCCAACCCTAGCCG 62.177 72.222 0.00 0.00 0.00 5.52
310 311 3.810188 GGGCTCCCCAACCCTAGC 61.810 72.222 0.00 0.00 44.65 3.42
361 362 4.864334 CTGGATGGTGCCCGCTCC 62.864 72.222 0.76 0.76 0.00 4.70
362 363 3.628646 AACTGGATGGTGCCCGCTC 62.629 63.158 0.00 0.00 0.00 5.03
363 364 3.650950 AACTGGATGGTGCCCGCT 61.651 61.111 0.00 0.00 0.00 5.52
364 365 3.443045 CAACTGGATGGTGCCCGC 61.443 66.667 0.00 0.00 0.00 6.13
369 370 2.507484 TGAAGAAGCAACTGGATGGTG 58.493 47.619 0.00 0.00 36.20 4.17
370 371 2.957402 TGAAGAAGCAACTGGATGGT 57.043 45.000 0.00 0.00 0.00 3.55
371 372 4.589216 TTTTGAAGAAGCAACTGGATGG 57.411 40.909 0.00 0.00 0.00 3.51
541 543 9.596677 TTTGTTACCGTAAAATAATCAGAAACG 57.403 29.630 0.00 0.00 0.00 3.60
615 617 5.184096 TGCAAACAAACTTGAAACCTGAGTA 59.816 36.000 0.00 0.00 0.00 2.59
688 705 1.671979 CACATGCATCGTTCATCCCT 58.328 50.000 0.00 0.00 0.00 4.20
834 852 4.432503 CCGATCGACGTAGAAAACACTTTG 60.433 45.833 18.66 0.00 40.78 2.77
855 873 1.064979 ACCAACTTTGTATAGGCCCCG 60.065 52.381 0.00 0.00 0.00 5.73
991 1027 0.405198 TGTGTTGCCATGATGACCCT 59.595 50.000 0.00 0.00 0.00 4.34
1058 1097 3.706373 GGGAGTTCTGGGCGAGCA 61.706 66.667 0.00 0.00 0.00 4.26
1210 1249 4.758251 TCCGTCGTCGTAGCCGGA 62.758 66.667 5.05 11.82 46.44 5.14
1329 1374 1.266175 CACACGACCTGAACGTACTCT 59.734 52.381 0.00 0.00 42.07 3.24
1356 1401 1.710339 GCAGCCGATCTTTGTCGAC 59.290 57.895 9.11 9.11 44.06 4.20
1536 1598 6.728200 CAAAGTGACTAAACTCAAATGAGCA 58.272 36.000 10.28 0.00 45.79 4.26
1635 1697 5.649782 TTAGTACAACTTTAGTCCGAGGG 57.350 43.478 0.00 0.00 0.00 4.30
1675 1737 5.607171 ACTTTTTATACTCTCCCCGATCCAT 59.393 40.000 0.00 0.00 0.00 3.41
1720 1783 7.094631 ACGTTAATTTCCTTTATCCAAAAGCC 58.905 34.615 0.00 0.00 0.00 4.35
1778 1841 1.002274 CAGGACCCTCTGCCCTAGT 59.998 63.158 0.00 0.00 0.00 2.57
1780 1843 0.261991 CTACAGGACCCTCTGCCCTA 59.738 60.000 0.00 0.00 38.26 3.53
1797 1860 9.817809 ATCTGCGTTCTTCTTATTAATGAACTA 57.182 29.630 11.59 3.39 36.03 2.24
1990 2054 5.233050 CCTCATCTAAACAAGAGTATGTGCG 59.767 44.000 0.00 0.00 37.74 5.34
2088 2154 0.241213 GGAGCTTCTGGAAAAACGCC 59.759 55.000 0.00 0.00 0.00 5.68
2915 2985 9.521503 TGTGTCAATTTCGTTTCAAATGATTAA 57.478 25.926 0.00 0.00 0.00 1.40
2916 2986 8.963130 GTGTGTCAATTTCGTTTCAAATGATTA 58.037 29.630 0.00 0.00 0.00 1.75
2917 2987 7.490725 TGTGTGTCAATTTCGTTTCAAATGATT 59.509 29.630 0.00 0.00 0.00 2.57
2918 2988 6.977502 TGTGTGTCAATTTCGTTTCAAATGAT 59.022 30.769 0.00 0.00 0.00 2.45
2919 2989 6.325596 TGTGTGTCAATTTCGTTTCAAATGA 58.674 32.000 0.00 0.00 0.00 2.57
2920 2990 6.566310 TGTGTGTCAATTTCGTTTCAAATG 57.434 33.333 0.00 0.00 0.00 2.32
2921 2991 6.292274 GCATGTGTGTCAATTTCGTTTCAAAT 60.292 34.615 0.00 0.00 0.00 2.32
2922 2992 5.005203 GCATGTGTGTCAATTTCGTTTCAAA 59.995 36.000 0.00 0.00 0.00 2.69
2923 2993 4.502282 GCATGTGTGTCAATTTCGTTTCAA 59.498 37.500 0.00 0.00 0.00 2.69
2924 2994 4.041049 GCATGTGTGTCAATTTCGTTTCA 58.959 39.130 0.00 0.00 0.00 2.69
2925 2995 4.041049 TGCATGTGTGTCAATTTCGTTTC 58.959 39.130 0.00 0.00 0.00 2.78
2926 2996 4.039151 TGCATGTGTGTCAATTTCGTTT 57.961 36.364 0.00 0.00 0.00 3.60
2927 2997 3.706802 TGCATGTGTGTCAATTTCGTT 57.293 38.095 0.00 0.00 0.00 3.85
2928 2998 3.004629 ACATGCATGTGTGTCAATTTCGT 59.995 39.130 30.92 0.90 40.03 3.85
2929 2999 3.567530 ACATGCATGTGTGTCAATTTCG 58.432 40.909 30.92 0.13 40.03 3.46
2930 3000 3.922240 GGACATGCATGTGTGTCAATTTC 59.078 43.478 35.92 16.89 44.99 2.17
2931 3001 3.306225 GGGACATGCATGTGTGTCAATTT 60.306 43.478 35.92 8.00 44.99 1.82
2932 3002 2.231964 GGGACATGCATGTGTGTCAATT 59.768 45.455 35.92 8.81 44.99 2.32
2933 3003 1.820519 GGGACATGCATGTGTGTCAAT 59.179 47.619 35.92 9.61 44.99 2.57
2934 3004 1.246649 GGGACATGCATGTGTGTCAA 58.753 50.000 35.92 0.00 44.99 3.18
2935 3005 0.110104 TGGGACATGCATGTGTGTCA 59.890 50.000 35.92 22.70 44.99 3.58
2936 3006 0.523072 GTGGGACATGCATGTGTGTC 59.477 55.000 35.92 21.99 44.52 3.67
2937 3007 0.178995 TGTGGGACATGCATGTGTGT 60.179 50.000 35.92 14.32 44.52 3.72
2938 3008 1.179152 ATGTGGGACATGCATGTGTG 58.821 50.000 35.92 10.59 44.52 3.82
2939 3009 3.675995 ATGTGGGACATGCATGTGT 57.324 47.368 35.92 15.59 44.52 3.72
2951 3021 1.196911 ACAATGAATGGGCATGTGGG 58.803 50.000 0.00 0.00 0.00 4.61
2952 3022 4.141892 ACATTACAATGAATGGGCATGTGG 60.142 41.667 8.89 0.00 40.50 4.17
2964 3034 7.920160 TGCTCAAACTATCACATTACAATGA 57.080 32.000 8.89 0.00 39.67 2.57
2965 3035 9.016623 CATTGCTCAAACTATCACATTACAATG 57.983 33.333 0.37 0.37 42.10 2.82
2966 3036 8.742777 ACATTGCTCAAACTATCACATTACAAT 58.257 29.630 0.00 0.00 0.00 2.71
2967 3037 8.109705 ACATTGCTCAAACTATCACATTACAA 57.890 30.769 0.00 0.00 0.00 2.41
2968 3038 7.686438 ACATTGCTCAAACTATCACATTACA 57.314 32.000 0.00 0.00 0.00 2.41
2969 3039 9.869844 GATACATTGCTCAAACTATCACATTAC 57.130 33.333 0.00 0.00 0.00 1.89
2970 3040 9.612066 TGATACATTGCTCAAACTATCACATTA 57.388 29.630 7.79 0.00 0.00 1.90
2971 3041 8.510243 TGATACATTGCTCAAACTATCACATT 57.490 30.769 7.79 0.00 0.00 2.71
2972 3042 8.510243 TTGATACATTGCTCAAACTATCACAT 57.490 30.769 9.99 0.00 29.68 3.21
2973 3043 7.607607 ACTTGATACATTGCTCAAACTATCACA 59.392 33.333 9.99 0.00 31.40 3.58
2974 3044 7.978982 ACTTGATACATTGCTCAAACTATCAC 58.021 34.615 9.99 0.00 31.40 3.06
2975 3045 7.280876 GGACTTGATACATTGCTCAAACTATCA 59.719 37.037 4.43 7.79 31.40 2.15
2976 3046 7.497249 AGGACTTGATACATTGCTCAAACTATC 59.503 37.037 4.43 0.00 31.40 2.08
2977 3047 7.341805 AGGACTTGATACATTGCTCAAACTAT 58.658 34.615 4.43 0.00 31.40 2.12
2978 3048 6.711277 AGGACTTGATACATTGCTCAAACTA 58.289 36.000 4.43 0.00 31.40 2.24
2979 3049 5.564550 AGGACTTGATACATTGCTCAAACT 58.435 37.500 4.43 1.82 31.40 2.66
2980 3050 5.412594 TGAGGACTTGATACATTGCTCAAAC 59.587 40.000 0.00 2.76 33.98 2.93
2981 3051 5.559770 TGAGGACTTGATACATTGCTCAAA 58.440 37.500 0.00 0.00 33.98 2.69
2982 3052 5.164620 TGAGGACTTGATACATTGCTCAA 57.835 39.130 0.00 3.19 33.98 3.02
2983 3053 4.824479 TGAGGACTTGATACATTGCTCA 57.176 40.909 0.00 0.00 34.45 4.26
2984 3054 6.500684 TTTTGAGGACTTGATACATTGCTC 57.499 37.500 0.00 0.00 0.00 4.26
2985 3055 6.899393 TTTTTGAGGACTTGATACATTGCT 57.101 33.333 0.00 0.00 0.00 3.91
3000 3070 6.994496 TCATACTGCTATGATCCTTTTTGAGG 59.006 38.462 0.00 0.00 39.29 3.86
3001 3071 8.442632 TTCATACTGCTATGATCCTTTTTGAG 57.557 34.615 0.00 0.00 38.85 3.02
3002 3072 8.985315 ATTCATACTGCTATGATCCTTTTTGA 57.015 30.769 0.00 0.00 38.85 2.69
3008 3078 9.458727 CCATTTAATTCATACTGCTATGATCCT 57.541 33.333 0.00 0.00 38.85 3.24
3009 3079 8.186821 GCCATTTAATTCATACTGCTATGATCC 58.813 37.037 0.00 0.00 38.85 3.36
3010 3080 8.733458 TGCCATTTAATTCATACTGCTATGATC 58.267 33.333 0.00 0.00 38.85 2.92
3011 3081 8.640063 TGCCATTTAATTCATACTGCTATGAT 57.360 30.769 0.00 0.00 38.85 2.45
3012 3082 8.640063 ATGCCATTTAATTCATACTGCTATGA 57.360 30.769 0.00 0.00 37.56 2.15
3015 3085 9.573166 AGTTATGCCATTTAATTCATACTGCTA 57.427 29.630 0.00 0.00 0.00 3.49
3016 3086 8.469309 AGTTATGCCATTTAATTCATACTGCT 57.531 30.769 0.00 0.00 0.00 4.24
3017 3087 8.352201 TGAGTTATGCCATTTAATTCATACTGC 58.648 33.333 0.00 0.00 0.00 4.40
3035 3105 9.453572 AATAGGGTATGTTATGCATGAGTTATG 57.546 33.333 10.16 0.00 38.47 1.90
3037 3107 9.938280 GTAATAGGGTATGTTATGCATGAGTTA 57.062 33.333 10.16 0.00 38.47 2.24
3038 3108 8.660435 AGTAATAGGGTATGTTATGCATGAGTT 58.340 33.333 10.16 0.00 38.47 3.01
3039 3109 8.207350 AGTAATAGGGTATGTTATGCATGAGT 57.793 34.615 10.16 0.00 38.47 3.41
3041 3111 9.938280 GTTAGTAATAGGGTATGTTATGCATGA 57.062 33.333 10.16 0.00 38.47 3.07
3042 3112 9.944376 AGTTAGTAATAGGGTATGTTATGCATG 57.056 33.333 10.16 0.00 38.47 4.06
3044 3114 9.772973 CAAGTTAGTAATAGGGTATGTTATGCA 57.227 33.333 0.00 0.00 0.00 3.96
3045 3115 9.774413 ACAAGTTAGTAATAGGGTATGTTATGC 57.226 33.333 0.00 0.00 0.00 3.14
3048 3118 8.206189 GCCACAAGTTAGTAATAGGGTATGTTA 58.794 37.037 0.00 0.00 0.00 2.41
3049 3119 7.052248 GCCACAAGTTAGTAATAGGGTATGTT 58.948 38.462 0.00 0.00 0.00 2.71
3050 3120 6.408891 GGCCACAAGTTAGTAATAGGGTATGT 60.409 42.308 0.00 0.00 0.00 2.29
3051 3121 5.995897 GGCCACAAGTTAGTAATAGGGTATG 59.004 44.000 0.00 0.00 0.00 2.39
3052 3122 5.072736 GGGCCACAAGTTAGTAATAGGGTAT 59.927 44.000 4.39 0.00 0.00 2.73
3053 3123 4.409901 GGGCCACAAGTTAGTAATAGGGTA 59.590 45.833 4.39 0.00 0.00 3.69
3054 3124 3.201487 GGGCCACAAGTTAGTAATAGGGT 59.799 47.826 4.39 0.00 0.00 4.34
3055 3125 3.201266 TGGGCCACAAGTTAGTAATAGGG 59.799 47.826 0.00 0.00 0.00 3.53
3056 3126 4.497291 TGGGCCACAAGTTAGTAATAGG 57.503 45.455 0.00 0.00 0.00 2.57
3057 3127 7.450074 TGATATGGGCCACAAGTTAGTAATAG 58.550 38.462 9.28 0.00 0.00 1.73
3058 3128 7.071950 ACTGATATGGGCCACAAGTTAGTAATA 59.928 37.037 9.28 0.00 0.00 0.98
3059 3129 6.126478 ACTGATATGGGCCACAAGTTAGTAAT 60.126 38.462 9.28 0.00 0.00 1.89
3060 3130 5.190925 ACTGATATGGGCCACAAGTTAGTAA 59.809 40.000 9.28 0.00 0.00 2.24
3061 3131 4.719773 ACTGATATGGGCCACAAGTTAGTA 59.280 41.667 9.28 0.00 0.00 1.82
3062 3132 3.523564 ACTGATATGGGCCACAAGTTAGT 59.476 43.478 9.28 6.26 0.00 2.24
3063 3133 4.156455 ACTGATATGGGCCACAAGTTAG 57.844 45.455 9.28 5.56 0.00 2.34
3064 3134 4.584638 AACTGATATGGGCCACAAGTTA 57.415 40.909 9.28 0.00 0.00 2.24
3065 3135 3.456380 AACTGATATGGGCCACAAGTT 57.544 42.857 9.28 13.47 0.00 2.66
3066 3136 3.685550 GCTAACTGATATGGGCCACAAGT 60.686 47.826 9.28 7.44 0.00 3.16
3067 3137 2.880890 GCTAACTGATATGGGCCACAAG 59.119 50.000 9.28 6.72 0.00 3.16
3068 3138 2.509548 AGCTAACTGATATGGGCCACAA 59.490 45.455 9.28 0.00 0.00 3.33
3069 3139 2.104792 GAGCTAACTGATATGGGCCACA 59.895 50.000 9.28 0.00 0.00 4.17
3070 3140 2.104792 TGAGCTAACTGATATGGGCCAC 59.895 50.000 9.28 0.00 0.00 5.01
3071 3141 2.407562 TGAGCTAACTGATATGGGCCA 58.592 47.619 9.61 9.61 0.00 5.36
3072 3142 3.008375 TCATGAGCTAACTGATATGGGCC 59.992 47.826 0.00 0.00 0.00 5.80
3073 3143 4.277515 TCATGAGCTAACTGATATGGGC 57.722 45.455 0.00 0.00 0.00 5.36
3074 3144 7.789026 TGATATCATGAGCTAACTGATATGGG 58.211 38.462 21.12 0.00 40.77 4.00
3075 3145 9.833917 AATGATATCATGAGCTAACTGATATGG 57.166 33.333 18.85 0.00 40.77 2.74
3079 3149 9.788889 TGAAAATGATATCATGAGCTAACTGAT 57.211 29.630 18.85 9.37 36.56 2.90
3080 3150 9.617523 TTGAAAATGATATCATGAGCTAACTGA 57.382 29.630 18.85 0.00 36.56 3.41
3081 3151 9.880064 CTTGAAAATGATATCATGAGCTAACTG 57.120 33.333 18.85 1.67 36.56 3.16
3082 3152 9.624373 ACTTGAAAATGATATCATGAGCTAACT 57.376 29.630 18.85 0.00 36.56 2.24
3085 3155 8.347771 GCAACTTGAAAATGATATCATGAGCTA 58.652 33.333 18.85 7.28 36.56 3.32
3086 3156 7.068348 AGCAACTTGAAAATGATATCATGAGCT 59.932 33.333 18.85 14.89 36.56 4.09
3087 3157 7.201145 AGCAACTTGAAAATGATATCATGAGC 58.799 34.615 18.85 13.26 36.56 4.26
3088 3158 7.861372 GGAGCAACTTGAAAATGATATCATGAG 59.139 37.037 18.85 13.22 36.56 2.90
3089 3159 7.339976 TGGAGCAACTTGAAAATGATATCATGA 59.660 33.333 18.85 0.00 36.56 3.07
3090 3160 7.434307 GTGGAGCAACTTGAAAATGATATCATG 59.566 37.037 18.85 7.81 36.56 3.07
3091 3161 7.417116 GGTGGAGCAACTTGAAAATGATATCAT 60.417 37.037 12.62 12.62 38.41 2.45
3092 3162 6.127647 GGTGGAGCAACTTGAAAATGATATCA 60.128 38.462 8.10 8.10 0.00 2.15
3093 3163 6.268566 GGTGGAGCAACTTGAAAATGATATC 58.731 40.000 0.00 0.00 0.00 1.63
3094 3164 5.127682 GGGTGGAGCAACTTGAAAATGATAT 59.872 40.000 0.00 0.00 0.00 1.63
3095 3165 4.462483 GGGTGGAGCAACTTGAAAATGATA 59.538 41.667 0.00 0.00 0.00 2.15
3096 3166 3.259123 GGGTGGAGCAACTTGAAAATGAT 59.741 43.478 0.00 0.00 0.00 2.45
3097 3167 2.627699 GGGTGGAGCAACTTGAAAATGA 59.372 45.455 0.00 0.00 0.00 2.57
3098 3168 2.364970 TGGGTGGAGCAACTTGAAAATG 59.635 45.455 0.00 0.00 0.00 2.32
3099 3169 2.629617 CTGGGTGGAGCAACTTGAAAAT 59.370 45.455 0.00 0.00 0.00 1.82
3100 3170 2.031120 CTGGGTGGAGCAACTTGAAAA 58.969 47.619 0.00 0.00 0.00 2.29
3101 3171 1.214175 TCTGGGTGGAGCAACTTGAAA 59.786 47.619 0.00 0.00 0.00 2.69
3102 3172 0.843309 TCTGGGTGGAGCAACTTGAA 59.157 50.000 0.00 0.00 0.00 2.69
3103 3173 0.843309 TTCTGGGTGGAGCAACTTGA 59.157 50.000 0.00 0.00 0.00 3.02
3104 3174 1.338020 GTTTCTGGGTGGAGCAACTTG 59.662 52.381 0.00 0.00 0.00 3.16
3105 3175 1.215423 AGTTTCTGGGTGGAGCAACTT 59.785 47.619 0.00 0.00 0.00 2.66
3106 3176 0.846693 AGTTTCTGGGTGGAGCAACT 59.153 50.000 0.00 0.00 0.00 3.16
3107 3177 2.561478 TAGTTTCTGGGTGGAGCAAC 57.439 50.000 0.00 0.00 0.00 4.17
3108 3178 3.117663 ACTTTAGTTTCTGGGTGGAGCAA 60.118 43.478 0.00 0.00 0.00 3.91
3109 3179 2.441750 ACTTTAGTTTCTGGGTGGAGCA 59.558 45.455 0.00 0.00 0.00 4.26
3110 3180 3.141767 ACTTTAGTTTCTGGGTGGAGC 57.858 47.619 0.00 0.00 0.00 4.70
3111 3181 5.429130 GGATACTTTAGTTTCTGGGTGGAG 58.571 45.833 1.38 0.00 0.00 3.86
3112 3182 4.226620 GGGATACTTTAGTTTCTGGGTGGA 59.773 45.833 1.38 0.00 0.00 4.02
3113 3183 4.018779 TGGGATACTTTAGTTTCTGGGTGG 60.019 45.833 1.38 0.00 0.00 4.61
3114 3184 4.941873 GTGGGATACTTTAGTTTCTGGGTG 59.058 45.833 1.38 0.00 0.00 4.61
3115 3185 4.600111 TGTGGGATACTTTAGTTTCTGGGT 59.400 41.667 1.38 0.00 0.00 4.51
3116 3186 5.174037 TGTGGGATACTTTAGTTTCTGGG 57.826 43.478 1.38 0.00 0.00 4.45
3117 3187 5.066505 GCATGTGGGATACTTTAGTTTCTGG 59.933 44.000 0.00 0.00 0.00 3.86
3118 3188 5.647658 TGCATGTGGGATACTTTAGTTTCTG 59.352 40.000 0.00 0.00 0.00 3.02
3119 3189 5.648092 GTGCATGTGGGATACTTTAGTTTCT 59.352 40.000 0.00 0.00 0.00 2.52
3120 3190 5.447279 CGTGCATGTGGGATACTTTAGTTTC 60.447 44.000 0.00 0.00 0.00 2.78
3121 3191 4.394920 CGTGCATGTGGGATACTTTAGTTT 59.605 41.667 0.00 0.00 0.00 2.66
3122 3192 3.938963 CGTGCATGTGGGATACTTTAGTT 59.061 43.478 0.00 0.00 0.00 2.24
3123 3193 3.055385 ACGTGCATGTGGGATACTTTAGT 60.055 43.478 11.65 0.00 0.00 2.24
3124 3194 3.531538 ACGTGCATGTGGGATACTTTAG 58.468 45.455 11.65 0.00 0.00 1.85
3125 3195 3.620427 ACGTGCATGTGGGATACTTTA 57.380 42.857 11.65 0.00 0.00 1.85
3126 3196 2.487762 CAACGTGCATGTGGGATACTTT 59.512 45.455 13.39 0.00 0.00 2.66
3127 3197 2.083774 CAACGTGCATGTGGGATACTT 58.916 47.619 13.39 0.00 0.00 2.24
3128 3198 1.737838 CAACGTGCATGTGGGATACT 58.262 50.000 13.39 0.00 0.00 2.12
3129 3199 0.098728 GCAACGTGCATGTGGGATAC 59.901 55.000 13.39 0.00 44.26 2.24
3130 3200 2.476772 GCAACGTGCATGTGGGATA 58.523 52.632 13.39 0.00 44.26 2.59
3131 3201 3.277133 GCAACGTGCATGTGGGAT 58.723 55.556 13.39 0.00 44.26 3.85
3248 3318 1.880271 CACAATTGCCACATTGCCAA 58.120 45.000 5.05 0.00 0.00 4.52
3273 3344 8.469200 TGTATCAAAAGAGCAATAAGGGAATTG 58.531 33.333 0.00 0.00 39.41 2.32
3288 3359 8.777413 CAAGTTCTCATTCACTGTATCAAAAGA 58.223 33.333 0.00 0.00 0.00 2.52
3307 3378 0.321996 GACCGCCCTTCTCAAGTTCT 59.678 55.000 0.00 0.00 0.00 3.01
3451 3522 1.388547 TGGTGAAAACAGACCAGCAC 58.611 50.000 0.00 0.00 37.32 4.40
3476 4957 4.696877 TGTAGCACAAATGTCAATCAGAGG 59.303 41.667 0.00 0.00 0.00 3.69
3512 4993 2.218530 GCGTGAATTGAAGCAACAAACC 59.781 45.455 0.00 0.00 33.44 3.27
3529 5010 5.516339 ACAAAGATCTTTCACTTTTTGCGTG 59.484 36.000 17.91 5.65 34.68 5.34
3579 5107 7.063544 GCTATTACATCAATCGATCCAGGTAAC 59.936 40.741 13.11 2.23 0.00 2.50
3580 5108 7.097192 GCTATTACATCAATCGATCCAGGTAA 58.903 38.462 13.19 13.19 0.00 2.85
3581 5109 6.351033 GGCTATTACATCAATCGATCCAGGTA 60.351 42.308 0.00 0.00 0.00 3.08
3582 5110 5.482908 GCTATTACATCAATCGATCCAGGT 58.517 41.667 0.00 0.00 0.00 4.00
3583 5111 4.872691 GGCTATTACATCAATCGATCCAGG 59.127 45.833 0.00 0.00 0.00 4.45
3584 5112 4.564372 CGGCTATTACATCAATCGATCCAG 59.436 45.833 0.00 0.00 0.00 3.86
3585 5113 4.021456 ACGGCTATTACATCAATCGATCCA 60.021 41.667 0.00 0.00 0.00 3.41
3586 5114 4.495422 ACGGCTATTACATCAATCGATCC 58.505 43.478 0.00 0.00 0.00 3.36
3587 5115 7.027760 TCTAACGGCTATTACATCAATCGATC 58.972 38.462 0.00 0.00 0.00 3.69
3588 5116 6.920817 TCTAACGGCTATTACATCAATCGAT 58.079 36.000 0.00 0.00 0.00 3.59
3589 5117 6.321848 TCTAACGGCTATTACATCAATCGA 57.678 37.500 0.00 0.00 0.00 3.59
3590 5118 7.582435 ATTCTAACGGCTATTACATCAATCG 57.418 36.000 0.00 0.00 0.00 3.34
3600 5128 9.893305 GCACATATTTTTATTCTAACGGCTATT 57.107 29.630 0.00 0.00 0.00 1.73
3601 5129 9.062524 TGCACATATTTTTATTCTAACGGCTAT 57.937 29.630 0.00 0.00 0.00 2.97
3602 5130 8.439993 TGCACATATTTTTATTCTAACGGCTA 57.560 30.769 0.00 0.00 0.00 3.93
3603 5131 7.328277 TGCACATATTTTTATTCTAACGGCT 57.672 32.000 0.00 0.00 0.00 5.52
3604 5132 7.979115 TTGCACATATTTTTATTCTAACGGC 57.021 32.000 0.00 0.00 0.00 5.68
3615 5143 8.567104 GGGAGAAACAATTTTGCACATATTTTT 58.433 29.630 0.00 0.00 0.00 1.94
3616 5144 7.174772 GGGGAGAAACAATTTTGCACATATTTT 59.825 33.333 0.00 0.00 0.00 1.82
3617 5145 6.654582 GGGGAGAAACAATTTTGCACATATTT 59.345 34.615 0.00 0.00 0.00 1.40
3618 5146 6.172630 GGGGAGAAACAATTTTGCACATATT 58.827 36.000 0.00 0.00 0.00 1.28
3619 5147 5.624281 CGGGGAGAAACAATTTTGCACATAT 60.624 40.000 0.00 0.00 0.00 1.78
3620 5148 4.321601 CGGGGAGAAACAATTTTGCACATA 60.322 41.667 0.00 0.00 0.00 2.29
3621 5149 3.554752 CGGGGAGAAACAATTTTGCACAT 60.555 43.478 0.00 0.00 0.00 3.21
3622 5150 2.223923 CGGGGAGAAACAATTTTGCACA 60.224 45.455 0.00 0.00 0.00 4.57
3623 5151 2.223947 ACGGGGAGAAACAATTTTGCAC 60.224 45.455 0.00 0.00 0.00 4.57
3624 5152 2.035632 ACGGGGAGAAACAATTTTGCA 58.964 42.857 0.00 0.00 0.00 4.08
3625 5153 2.403259 CACGGGGAGAAACAATTTTGC 58.597 47.619 0.00 0.00 0.00 3.68
3626 5154 2.035832 AGCACGGGGAGAAACAATTTTG 59.964 45.455 0.00 0.00 0.00 2.44
3627 5155 2.316108 AGCACGGGGAGAAACAATTTT 58.684 42.857 0.00 0.00 0.00 1.82
3628 5156 1.995376 AGCACGGGGAGAAACAATTT 58.005 45.000 0.00 0.00 0.00 1.82
3629 5157 1.886542 GAAGCACGGGGAGAAACAATT 59.113 47.619 0.00 0.00 0.00 2.32
3630 5158 1.073923 AGAAGCACGGGGAGAAACAAT 59.926 47.619 0.00 0.00 0.00 2.71
3631 5159 0.472471 AGAAGCACGGGGAGAAACAA 59.528 50.000 0.00 0.00 0.00 2.83
3632 5160 0.472471 AAGAAGCACGGGGAGAAACA 59.528 50.000 0.00 0.00 0.00 2.83
3633 5161 1.157585 GAAGAAGCACGGGGAGAAAC 58.842 55.000 0.00 0.00 0.00 2.78
3634 5162 0.036306 GGAAGAAGCACGGGGAGAAA 59.964 55.000 0.00 0.00 0.00 2.52
3635 5163 0.836400 AGGAAGAAGCACGGGGAGAA 60.836 55.000 0.00 0.00 0.00 2.87
3636 5164 1.229209 AGGAAGAAGCACGGGGAGA 60.229 57.895 0.00 0.00 0.00 3.71
3637 5165 1.219393 GAGGAAGAAGCACGGGGAG 59.781 63.158 0.00 0.00 0.00 4.30
3638 5166 1.229209 AGAGGAAGAAGCACGGGGA 60.229 57.895 0.00 0.00 0.00 4.81
3639 5167 1.219393 GAGAGGAAGAAGCACGGGG 59.781 63.158 0.00 0.00 0.00 5.73
3640 5168 1.219393 GGAGAGGAAGAAGCACGGG 59.781 63.158 0.00 0.00 0.00 5.28
3641 5169 0.108424 CTGGAGAGGAAGAAGCACGG 60.108 60.000 0.00 0.00 0.00 4.94
3642 5170 0.739112 GCTGGAGAGGAAGAAGCACG 60.739 60.000 0.00 0.00 34.01 5.34
3643 5171 0.612744 AGCTGGAGAGGAAGAAGCAC 59.387 55.000 0.00 0.00 36.32 4.40
3644 5172 0.612229 CAGCTGGAGAGGAAGAAGCA 59.388 55.000 5.57 0.00 36.32 3.91
3645 5173 0.612744 ACAGCTGGAGAGGAAGAAGC 59.387 55.000 19.93 0.00 0.00 3.86
3646 5174 1.898472 TGACAGCTGGAGAGGAAGAAG 59.102 52.381 19.93 0.00 0.00 2.85
3647 5175 1.620819 GTGACAGCTGGAGAGGAAGAA 59.379 52.381 19.93 0.00 0.00 2.52
3648 5176 1.261480 GTGACAGCTGGAGAGGAAGA 58.739 55.000 19.93 0.00 0.00 2.87
3649 5177 0.108898 CGTGACAGCTGGAGAGGAAG 60.109 60.000 19.93 0.00 0.00 3.46
3650 5178 1.536073 CCGTGACAGCTGGAGAGGAA 61.536 60.000 19.93 0.00 0.00 3.36
3651 5179 1.979155 CCGTGACAGCTGGAGAGGA 60.979 63.158 19.93 0.00 0.00 3.71
3652 5180 2.575993 CCGTGACAGCTGGAGAGG 59.424 66.667 19.93 12.11 0.00 3.69
3653 5181 2.125753 GCCGTGACAGCTGGAGAG 60.126 66.667 19.93 6.60 0.00 3.20
3654 5182 3.695606 GGCCGTGACAGCTGGAGA 61.696 66.667 19.93 0.00 0.00 3.71
3660 5188 4.681978 AAGACCGGCCGTGACAGC 62.682 66.667 26.12 6.22 0.00 4.40
3661 5189 2.027625 GAAAGACCGGCCGTGACAG 61.028 63.158 26.12 10.93 0.00 3.51
3726 5254 5.529060 GTCTGTCAGTGAGAAGGAATTGTTT 59.471 40.000 0.00 0.00 0.00 2.83
3729 5257 4.635223 TGTCTGTCAGTGAGAAGGAATTG 58.365 43.478 0.00 0.00 0.00 2.32
3959 5488 2.435372 ATCTCCTCGAGCTTCACTCT 57.565 50.000 6.99 0.00 43.85 3.24
4051 5584 1.025647 GTGAGTCCGACGCCTAGAGT 61.026 60.000 0.00 0.00 0.00 3.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.