Multiple sequence alignment - TraesCS7D01G150700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G150700 chr7D 100.000 5528 0 0 1 5528 99956864 99951337 0.000000e+00 10209.0
1 TraesCS7D01G150700 chr7D 98.051 513 9 1 5017 5528 118589184 118589696 0.000000e+00 891.0
2 TraesCS7D01G150700 chr7D 97.856 513 10 1 5017 5528 295300178 295299666 0.000000e+00 885.0
3 TraesCS7D01G150700 chr7A 87.965 4678 286 127 312 4831 102336529 102331971 0.000000e+00 5264.0
4 TraesCS7D01G150700 chr7B 92.419 3100 164 39 1946 5016 55343229 55340172 0.000000e+00 4357.0
5 TraesCS7D01G150700 chr7B 86.068 1170 91 45 314 1438 55344889 55343747 0.000000e+00 1192.0
6 TraesCS7D01G150700 chr7B 85.595 479 43 14 1443 1895 55343709 55343231 3.870000e-131 479.0
7 TraesCS7D01G150700 chr7B 89.796 49 3 2 4896 4944 70821845 70821799 1.660000e-05 62.1
8 TraesCS7D01G150700 chr2D 98.438 512 8 0 5017 5528 109709112 109709623 0.000000e+00 902.0
9 TraesCS7D01G150700 chr2D 98.438 512 8 0 5017 5528 631902329 631901818 0.000000e+00 902.0
10 TraesCS7D01G150700 chr2D 94.595 37 2 0 4897 4933 75387961 75387925 2.150000e-04 58.4
11 TraesCS7D01G150700 chr5D 98.054 514 9 1 5016 5528 390634058 390633545 0.000000e+00 893.0
12 TraesCS7D01G150700 chr5D 98.051 513 9 1 5017 5528 438392208 438392720 0.000000e+00 891.0
13 TraesCS7D01G150700 chr5D 75.088 285 55 14 2718 2995 275613826 275613551 9.730000e-23 119.0
14 TraesCS7D01G150700 chr5D 86.364 88 10 2 3962 4048 476462586 476462672 1.640000e-15 95.3
15 TraesCS7D01G150700 chr5D 82.524 103 16 2 3947 4048 232618952 232618851 7.630000e-14 89.8
16 TraesCS7D01G150700 chr6D 97.860 514 11 0 5015 5528 466258306 466258819 0.000000e+00 889.0
17 TraesCS7D01G150700 chr3D 97.860 514 9 1 5017 5528 250901434 250901947 0.000000e+00 887.0
18 TraesCS7D01G150700 chr3D 86.239 109 13 2 3947 4054 427816842 427816735 3.500000e-22 117.0
19 TraesCS7D01G150700 chr1D 97.670 515 11 1 5015 5528 79156800 79157314 0.000000e+00 883.0
20 TraesCS7D01G150700 chr3B 86.239 109 13 2 3947 4054 559341275 559341168 3.500000e-22 117.0
21 TraesCS7D01G150700 chr3A 87.379 103 11 2 3947 4048 557949812 557949913 3.500000e-22 117.0
22 TraesCS7D01G150700 chr3A 100.000 30 0 0 4897 4926 545158762 545158733 7.740000e-04 56.5
23 TraesCS7D01G150700 chr2A 85.217 115 14 3 3947 4060 746852126 746852014 1.260000e-21 115.0
24 TraesCS7D01G150700 chr5A 74.552 279 60 9 2721 2995 364421224 364420953 1.630000e-20 111.0
25 TraesCS7D01G150700 chr5A 83.495 103 15 2 3947 4048 322615366 322615467 1.640000e-15 95.3
26 TraesCS7D01G150700 chr5B 73.427 286 58 16 2718 2995 312910842 312910567 2.120000e-14 91.6
27 TraesCS7D01G150700 chr1A 100.000 30 0 0 4897 4926 465433586 465433557 7.740000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G150700 chr7D 99951337 99956864 5527 True 10209.000000 10209 100.000000 1 5528 1 chr7D.!!$R1 5527
1 TraesCS7D01G150700 chr7D 118589184 118589696 512 False 891.000000 891 98.051000 5017 5528 1 chr7D.!!$F1 511
2 TraesCS7D01G150700 chr7D 295299666 295300178 512 True 885.000000 885 97.856000 5017 5528 1 chr7D.!!$R2 511
3 TraesCS7D01G150700 chr7A 102331971 102336529 4558 True 5264.000000 5264 87.965000 312 4831 1 chr7A.!!$R1 4519
4 TraesCS7D01G150700 chr7B 55340172 55344889 4717 True 2009.333333 4357 88.027333 314 5016 3 chr7B.!!$R2 4702
5 TraesCS7D01G150700 chr2D 109709112 109709623 511 False 902.000000 902 98.438000 5017 5528 1 chr2D.!!$F1 511
6 TraesCS7D01G150700 chr2D 631901818 631902329 511 True 902.000000 902 98.438000 5017 5528 1 chr2D.!!$R2 511
7 TraesCS7D01G150700 chr5D 390633545 390634058 513 True 893.000000 893 98.054000 5016 5528 1 chr5D.!!$R3 512
8 TraesCS7D01G150700 chr5D 438392208 438392720 512 False 891.000000 891 98.051000 5017 5528 1 chr5D.!!$F1 511
9 TraesCS7D01G150700 chr6D 466258306 466258819 513 False 889.000000 889 97.860000 5015 5528 1 chr6D.!!$F1 513
10 TraesCS7D01G150700 chr3D 250901434 250901947 513 False 887.000000 887 97.860000 5017 5528 1 chr3D.!!$F1 511
11 TraesCS7D01G150700 chr1D 79156800 79157314 514 False 883.000000 883 97.670000 5015 5528 1 chr1D.!!$F1 513


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
773 816 0.032615 TCTCCTTCTCCCTCTCTGCC 60.033 60.0 0.00 0.0 0.00 4.85 F
983 1047 0.038709 GCAGAGAGCAGTTCGTCAGT 60.039 55.0 0.00 0.0 44.79 3.41 F
994 1058 0.110956 TTCGTCAGTTCGTCGTCTCG 60.111 55.0 0.00 0.0 0.00 4.04 F
1379 1481 0.112412 TTCTTGGTCTTTCTGCCCCC 59.888 55.0 0.00 0.0 0.00 5.40 F
1525 1661 0.321564 TGAGGCATTTGACCGGTGAG 60.322 55.0 14.63 0.0 0.00 3.51 F
2589 2811 0.825425 TTCCGCTGGTTTCAATGGCA 60.825 50.0 0.00 0.0 0.00 4.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1741 1922 0.174845 CAGATACGCTCCAACGGGAA 59.825 55.0 0.00 0.0 44.38 3.97 R
2189 2386 0.329596 AACTGGAGCCCAAGACCATC 59.670 55.0 0.00 0.0 30.80 3.51 R
2191 2388 0.984230 CTAACTGGAGCCCAAGACCA 59.016 55.0 0.00 0.0 30.80 4.02 R
3214 3436 0.101399 CTTCCCCGACGACATCAGAG 59.899 60.0 0.00 0.0 0.00 3.35 R
3317 3539 0.976641 ATGGTCTCGAGCACTTCCAA 59.023 50.0 7.81 0.0 42.02 3.53 R
4553 4793 0.108615 CTCTGTACAGCCAACCTCCG 60.109 60.0 18.45 0.0 0.00 4.63 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.396750 GCTTGATCCGTAGTTTTCATCTC 57.603 43.478 0.00 0.00 0.00 2.75
23 24 4.870426 GCTTGATCCGTAGTTTTCATCTCA 59.130 41.667 0.00 0.00 0.00 3.27
24 25 5.220491 GCTTGATCCGTAGTTTTCATCTCAC 60.220 44.000 0.00 0.00 0.00 3.51
25 26 4.755411 TGATCCGTAGTTTTCATCTCACC 58.245 43.478 0.00 0.00 0.00 4.02
26 27 3.226346 TCCGTAGTTTTCATCTCACCG 57.774 47.619 0.00 0.00 0.00 4.94
27 28 1.659098 CCGTAGTTTTCATCTCACCGC 59.341 52.381 0.00 0.00 0.00 5.68
28 29 1.659098 CGTAGTTTTCATCTCACCGCC 59.341 52.381 0.00 0.00 0.00 6.13
29 30 1.659098 GTAGTTTTCATCTCACCGCCG 59.341 52.381 0.00 0.00 0.00 6.46
30 31 0.320374 AGTTTTCATCTCACCGCCGA 59.680 50.000 0.00 0.00 0.00 5.54
31 32 1.153353 GTTTTCATCTCACCGCCGAA 58.847 50.000 0.00 0.00 0.00 4.30
32 33 1.533731 GTTTTCATCTCACCGCCGAAA 59.466 47.619 0.00 0.00 0.00 3.46
33 34 2.107950 TTTCATCTCACCGCCGAAAT 57.892 45.000 0.00 0.00 0.00 2.17
34 35 2.107950 TTCATCTCACCGCCGAAATT 57.892 45.000 0.00 0.00 0.00 1.82
35 36 1.651987 TCATCTCACCGCCGAAATTC 58.348 50.000 0.00 0.00 0.00 2.17
36 37 0.301687 CATCTCACCGCCGAAATTCG 59.698 55.000 8.62 8.62 40.07 3.34
37 38 1.429148 ATCTCACCGCCGAAATTCGC 61.429 55.000 10.24 4.90 38.82 4.70
38 39 2.357638 TCACCGCCGAAATTCGCA 60.358 55.556 10.24 0.00 38.82 5.10
39 40 1.705337 CTCACCGCCGAAATTCGCAT 61.705 55.000 10.24 0.00 38.82 4.73
40 41 0.460459 TCACCGCCGAAATTCGCATA 60.460 50.000 10.24 0.00 38.82 3.14
41 42 0.586319 CACCGCCGAAATTCGCATAT 59.414 50.000 10.24 0.00 38.82 1.78
42 43 0.865769 ACCGCCGAAATTCGCATATC 59.134 50.000 10.24 0.00 38.82 1.63
43 44 0.179250 CCGCCGAAATTCGCATATCG 60.179 55.000 10.24 7.40 38.82 2.92
44 45 0.781787 CGCCGAAATTCGCATATCGA 59.218 50.000 10.24 0.00 46.88 3.59
62 63 3.139850 TCGAATCTCGAGAGATGTACCC 58.860 50.000 21.52 2.77 46.75 3.69
63 64 3.142951 CGAATCTCGAGAGATGTACCCT 58.857 50.000 21.52 0.00 46.75 4.34
64 65 3.187637 CGAATCTCGAGAGATGTACCCTC 59.812 52.174 21.52 7.93 46.75 4.30
65 66 3.866703 ATCTCGAGAGATGTACCCTCA 57.133 47.619 21.52 0.00 45.77 3.86
66 67 2.920524 TCTCGAGAGATGTACCCTCAC 58.079 52.381 12.08 7.22 40.84 3.51
67 68 1.600013 CTCGAGAGATGTACCCTCACG 59.400 57.143 6.58 18.79 42.97 4.35
68 69 1.208776 TCGAGAGATGTACCCTCACGA 59.791 52.381 21.50 21.50 46.04 4.35
69 70 2.014857 CGAGAGATGTACCCTCACGAA 58.985 52.381 19.58 0.00 43.83 3.85
70 71 2.032302 CGAGAGATGTACCCTCACGAAG 59.968 54.545 19.58 0.00 43.83 3.79
71 72 3.280295 GAGAGATGTACCCTCACGAAGA 58.720 50.000 12.92 0.00 33.25 2.87
72 73 3.018149 AGAGATGTACCCTCACGAAGAC 58.982 50.000 12.92 0.00 33.25 3.01
73 74 2.099427 GAGATGTACCCTCACGAAGACC 59.901 54.545 7.31 0.00 0.00 3.85
74 75 2.100989 GATGTACCCTCACGAAGACCT 58.899 52.381 0.00 0.00 0.00 3.85
75 76 2.005370 TGTACCCTCACGAAGACCTT 57.995 50.000 0.00 0.00 0.00 3.50
76 77 2.322658 TGTACCCTCACGAAGACCTTT 58.677 47.619 0.00 0.00 0.00 3.11
77 78 2.298163 TGTACCCTCACGAAGACCTTTC 59.702 50.000 0.00 0.00 0.00 2.62
78 79 0.317479 ACCCTCACGAAGACCTTTCG 59.683 55.000 7.66 7.66 46.36 3.46
79 80 0.389948 CCCTCACGAAGACCTTTCGG 60.390 60.000 13.06 3.61 45.34 4.30
81 82 1.419374 CTCACGAAGACCTTTCGGTG 58.581 55.000 13.06 9.02 45.73 4.94
82 83 1.000607 CTCACGAAGACCTTTCGGTGA 60.001 52.381 13.06 11.98 45.73 4.02
83 84 1.409790 TCACGAAGACCTTTCGGTGAA 59.590 47.619 13.06 0.00 45.73 3.18
84 85 1.525619 CACGAAGACCTTTCGGTGAAC 59.474 52.381 13.06 0.00 45.73 3.18
85 86 1.137479 ACGAAGACCTTTCGGTGAACA 59.863 47.619 13.06 0.00 45.73 3.18
86 87 1.525619 CGAAGACCTTTCGGTGAACAC 59.474 52.381 1.60 0.00 45.73 3.32
87 88 1.871676 GAAGACCTTTCGGTGAACACC 59.128 52.381 13.32 13.32 45.73 4.16
110 111 3.842923 CGTGGAGGCGCAGGAGAT 61.843 66.667 10.83 0.00 0.00 2.75
111 112 2.586792 GTGGAGGCGCAGGAGATT 59.413 61.111 10.83 0.00 0.00 2.40
112 113 1.817099 GTGGAGGCGCAGGAGATTG 60.817 63.158 10.83 0.00 0.00 2.67
113 114 2.899339 GGAGGCGCAGGAGATTGC 60.899 66.667 10.83 0.00 40.67 3.56
114 115 2.188994 GAGGCGCAGGAGATTGCT 59.811 61.111 10.83 0.00 41.90 3.91
115 116 2.124819 AGGCGCAGGAGATTGCTG 60.125 61.111 10.83 0.00 41.90 4.41
124 125 3.806380 CAGGAGATTGCTGCAGAATAGT 58.194 45.455 20.43 5.56 34.49 2.12
125 126 4.953667 CAGGAGATTGCTGCAGAATAGTA 58.046 43.478 20.43 0.00 34.49 1.82
126 127 5.549347 CAGGAGATTGCTGCAGAATAGTAT 58.451 41.667 20.43 0.00 34.49 2.12
127 128 5.408909 CAGGAGATTGCTGCAGAATAGTATG 59.591 44.000 20.43 2.60 34.49 2.39
128 129 4.153835 GGAGATTGCTGCAGAATAGTATGC 59.846 45.833 20.43 2.23 42.53 3.14
135 136 3.797039 TGCAGAATAGTATGCAGACACC 58.203 45.455 14.90 0.00 46.73 4.16
136 137 2.797156 GCAGAATAGTATGCAGACACCG 59.203 50.000 14.90 0.00 41.77 4.94
137 138 2.797156 CAGAATAGTATGCAGACACCGC 59.203 50.000 14.90 0.35 0.00 5.68
138 139 2.135933 GAATAGTATGCAGACACCGCC 58.864 52.381 14.90 0.00 0.00 6.13
139 140 1.119684 ATAGTATGCAGACACCGCCA 58.880 50.000 14.90 0.00 0.00 5.69
140 141 0.174845 TAGTATGCAGACACCGCCAC 59.825 55.000 14.90 0.00 0.00 5.01
141 142 2.106683 GTATGCAGACACCGCCACC 61.107 63.158 6.60 0.00 0.00 4.61
142 143 2.290287 TATGCAGACACCGCCACCT 61.290 57.895 0.00 0.00 0.00 4.00
143 144 2.520465 TATGCAGACACCGCCACCTG 62.520 60.000 0.00 0.00 0.00 4.00
144 145 4.314440 GCAGACACCGCCACCTGA 62.314 66.667 0.00 0.00 0.00 3.86
145 146 2.665000 CAGACACCGCCACCTGAT 59.335 61.111 0.00 0.00 0.00 2.90
146 147 1.448540 CAGACACCGCCACCTGATC 60.449 63.158 0.00 0.00 0.00 2.92
147 148 2.509336 GACACCGCCACCTGATCG 60.509 66.667 0.00 0.00 0.00 3.69
148 149 2.994995 ACACCGCCACCTGATCGA 60.995 61.111 0.00 0.00 0.00 3.59
149 150 2.509336 CACCGCCACCTGATCGAC 60.509 66.667 0.00 0.00 0.00 4.20
150 151 3.771160 ACCGCCACCTGATCGACC 61.771 66.667 0.00 0.00 0.00 4.79
151 152 4.873129 CCGCCACCTGATCGACCG 62.873 72.222 0.00 0.00 0.00 4.79
152 153 4.873129 CGCCACCTGATCGACCGG 62.873 72.222 0.00 0.00 0.00 5.28
153 154 4.530857 GCCACCTGATCGACCGGG 62.531 72.222 1.88 1.88 38.55 5.73
154 155 3.075005 CCACCTGATCGACCGGGT 61.075 66.667 3.69 3.69 46.31 5.28
155 156 2.494918 CACCTGATCGACCGGGTC 59.505 66.667 7.56 17.38 43.67 4.46
156 157 2.052690 CACCTGATCGACCGGGTCT 61.053 63.158 23.86 7.13 43.67 3.85
157 158 2.052690 ACCTGATCGACCGGGTCTG 61.053 63.158 23.86 17.00 41.86 3.51
158 159 2.786495 CCTGATCGACCGGGTCTGG 61.786 68.421 23.86 10.38 0.00 3.86
159 160 1.753078 CTGATCGACCGGGTCTGGA 60.753 63.158 23.86 15.29 0.00 3.86
160 161 1.076265 TGATCGACCGGGTCTGGAT 60.076 57.895 23.86 19.04 0.00 3.41
161 162 1.107538 TGATCGACCGGGTCTGGATC 61.108 60.000 25.81 25.81 33.32 3.36
162 163 1.076265 ATCGACCGGGTCTGGATCA 60.076 57.895 23.86 3.64 0.00 2.92
163 164 1.392710 ATCGACCGGGTCTGGATCAC 61.393 60.000 23.86 0.00 0.00 3.06
164 165 2.901042 GACCGGGTCTGGATCACC 59.099 66.667 19.92 0.00 0.00 4.02
165 166 1.987855 GACCGGGTCTGGATCACCA 60.988 63.158 19.92 0.00 44.76 4.17
166 167 2.240162 GACCGGGTCTGGATCACCAC 62.240 65.000 19.92 0.00 41.77 4.16
167 168 2.584608 CGGGTCTGGATCACCACC 59.415 66.667 3.34 1.00 41.77 4.61
168 169 2.290287 CGGGTCTGGATCACCACCA 61.290 63.158 3.34 0.00 41.77 4.17
169 170 1.299976 GGGTCTGGATCACCACCAC 59.700 63.158 3.34 0.00 41.77 4.16
170 171 1.201429 GGGTCTGGATCACCACCACT 61.201 60.000 3.34 0.00 41.77 4.00
171 172 1.568504 GGTCTGGATCACCACCACTA 58.431 55.000 0.00 0.00 41.77 2.74
172 173 1.906574 GGTCTGGATCACCACCACTAA 59.093 52.381 0.00 0.00 41.77 2.24
173 174 2.093447 GGTCTGGATCACCACCACTAAG 60.093 54.545 0.00 0.00 41.77 2.18
174 175 1.555075 TCTGGATCACCACCACTAAGC 59.445 52.381 0.00 0.00 41.77 3.09
175 176 0.618458 TGGATCACCACCACTAAGCC 59.382 55.000 0.00 0.00 41.77 4.35
176 177 0.618458 GGATCACCACCACTAAGCCA 59.382 55.000 0.00 0.00 35.97 4.75
177 178 1.212935 GGATCACCACCACTAAGCCAT 59.787 52.381 0.00 0.00 35.97 4.40
178 179 2.357154 GGATCACCACCACTAAGCCATT 60.357 50.000 0.00 0.00 35.97 3.16
179 180 2.489938 TCACCACCACTAAGCCATTC 57.510 50.000 0.00 0.00 0.00 2.67
180 181 1.702401 TCACCACCACTAAGCCATTCA 59.298 47.619 0.00 0.00 0.00 2.57
181 182 2.086869 CACCACCACTAAGCCATTCAG 58.913 52.381 0.00 0.00 0.00 3.02
182 183 1.985159 ACCACCACTAAGCCATTCAGA 59.015 47.619 0.00 0.00 0.00 3.27
183 184 2.578021 ACCACCACTAAGCCATTCAGAT 59.422 45.455 0.00 0.00 0.00 2.90
184 185 3.209410 CCACCACTAAGCCATTCAGATC 58.791 50.000 0.00 0.00 0.00 2.75
185 186 3.209410 CACCACTAAGCCATTCAGATCC 58.791 50.000 0.00 0.00 0.00 3.36
186 187 2.158900 ACCACTAAGCCATTCAGATCCG 60.159 50.000 0.00 0.00 0.00 4.18
187 188 2.103094 CCACTAAGCCATTCAGATCCGA 59.897 50.000 0.00 0.00 0.00 4.55
188 189 3.432186 CCACTAAGCCATTCAGATCCGAA 60.432 47.826 0.00 0.00 0.00 4.30
189 190 4.384056 CACTAAGCCATTCAGATCCGAAT 58.616 43.478 0.00 0.00 36.00 3.34
190 191 4.450419 CACTAAGCCATTCAGATCCGAATC 59.550 45.833 0.96 0.00 33.27 2.52
191 192 2.160822 AGCCATTCAGATCCGAATCG 57.839 50.000 0.96 0.00 36.97 3.34
201 202 4.946038 CCGAATCGGGGCAACTAA 57.054 55.556 14.91 0.00 44.15 2.24
202 203 2.390427 CCGAATCGGGGCAACTAAC 58.610 57.895 14.91 0.00 44.15 2.34
203 204 1.426041 CCGAATCGGGGCAACTAACG 61.426 60.000 14.91 0.00 44.15 3.18
204 205 1.719709 GAATCGGGGCAACTAACGC 59.280 57.895 0.00 0.00 0.00 4.84
205 206 2.032185 GAATCGGGGCAACTAACGCG 62.032 60.000 3.53 3.53 43.27 6.01
206 207 4.745751 TCGGGGCAACTAACGCGG 62.746 66.667 12.47 0.00 42.35 6.46
208 209 4.710167 GGGGCAACTAACGCGGGT 62.710 66.667 12.47 0.00 0.00 5.28
209 210 3.428282 GGGCAACTAACGCGGGTG 61.428 66.667 12.47 2.08 0.00 4.61
210 211 2.357760 GGCAACTAACGCGGGTGA 60.358 61.111 12.47 0.00 0.00 4.02
211 212 1.962306 GGCAACTAACGCGGGTGAA 60.962 57.895 12.47 0.00 0.00 3.18
212 213 1.205820 GCAACTAACGCGGGTGAAC 59.794 57.895 12.47 0.00 0.00 3.18
213 214 1.864176 CAACTAACGCGGGTGAACC 59.136 57.895 12.47 0.00 0.00 3.62
214 215 0.881159 CAACTAACGCGGGTGAACCA 60.881 55.000 12.47 0.00 40.22 3.67
215 216 0.035739 AACTAACGCGGGTGAACCAT 59.964 50.000 12.47 0.00 40.22 3.55
216 217 0.672401 ACTAACGCGGGTGAACCATG 60.672 55.000 12.47 0.00 40.22 3.66
217 218 1.366111 CTAACGCGGGTGAACCATGG 61.366 60.000 11.19 11.19 40.22 3.66
218 219 1.828461 TAACGCGGGTGAACCATGGA 61.828 55.000 21.47 0.00 40.22 3.41
219 220 3.124921 CGCGGGTGAACCATGGAC 61.125 66.667 21.47 12.58 40.22 4.02
220 221 3.124921 GCGGGTGAACCATGGACG 61.125 66.667 21.47 13.16 40.22 4.79
221 222 2.345991 CGGGTGAACCATGGACGT 59.654 61.111 21.47 2.39 40.22 4.34
222 223 1.740296 CGGGTGAACCATGGACGTC 60.740 63.158 21.47 7.13 40.22 4.34
223 224 1.373435 GGGTGAACCATGGACGTCA 59.627 57.895 21.47 15.48 39.85 4.35
224 225 0.953960 GGGTGAACCATGGACGTCAC 60.954 60.000 26.30 26.30 39.85 3.67
225 226 0.034896 GGTGAACCATGGACGTCACT 59.965 55.000 29.65 0.00 35.64 3.41
226 227 1.148310 GTGAACCATGGACGTCACTG 58.852 55.000 26.66 13.27 0.00 3.66
227 228 0.034756 TGAACCATGGACGTCACTGG 59.965 55.000 25.69 25.69 33.31 4.00
228 229 0.320374 GAACCATGGACGTCACTGGA 59.680 55.000 31.06 7.57 32.25 3.86
229 230 0.321671 AACCATGGACGTCACTGGAG 59.678 55.000 31.06 13.33 32.25 3.86
230 231 0.832135 ACCATGGACGTCACTGGAGT 60.832 55.000 31.06 14.78 32.25 3.85
231 232 0.321671 CCATGGACGTCACTGGAGTT 59.678 55.000 24.06 0.00 0.00 3.01
232 233 1.432514 CATGGACGTCACTGGAGTTG 58.567 55.000 18.91 0.00 0.00 3.16
233 234 0.320771 ATGGACGTCACTGGAGTTGC 60.321 55.000 18.91 0.00 0.00 4.17
234 235 2.022129 GGACGTCACTGGAGTTGCG 61.022 63.158 18.91 0.00 0.00 4.85
235 236 2.022129 GACGTCACTGGAGTTGCGG 61.022 63.158 11.55 0.00 0.00 5.69
236 237 2.029073 CGTCACTGGAGTTGCGGT 59.971 61.111 0.00 0.00 0.00 5.68
237 238 1.594293 CGTCACTGGAGTTGCGGTT 60.594 57.895 0.00 0.00 0.00 4.44
238 239 1.831389 CGTCACTGGAGTTGCGGTTG 61.831 60.000 0.00 0.00 0.00 3.77
239 240 1.891919 TCACTGGAGTTGCGGTTGC 60.892 57.895 0.00 0.00 43.20 4.17
240 241 2.594592 ACTGGAGTTGCGGTTGCC 60.595 61.111 0.00 0.00 41.78 4.52
241 242 3.365265 CTGGAGTTGCGGTTGCCC 61.365 66.667 0.00 0.00 41.78 5.36
251 252 3.134127 GGTTGCCCGCCATCAGAC 61.134 66.667 0.00 0.00 0.00 3.51
252 253 3.134127 GTTGCCCGCCATCAGACC 61.134 66.667 0.00 0.00 0.00 3.85
253 254 4.424711 TTGCCCGCCATCAGACCC 62.425 66.667 0.00 0.00 0.00 4.46
256 257 4.530857 CCCGCCATCAGACCCGAC 62.531 72.222 0.00 0.00 0.00 4.79
257 258 4.530857 CCGCCATCAGACCCGACC 62.531 72.222 0.00 0.00 0.00 4.79
258 259 4.873129 CGCCATCAGACCCGACCG 62.873 72.222 0.00 0.00 0.00 4.79
260 261 4.530857 CCATCAGACCCGACCGCC 62.531 72.222 0.00 0.00 0.00 6.13
261 262 4.873129 CATCAGACCCGACCGCCG 62.873 72.222 0.00 0.00 38.18 6.46
287 288 3.503363 GCATGGCAGCGGACAGTC 61.503 66.667 0.00 0.00 33.72 3.51
288 289 3.190849 CATGGCAGCGGACAGTCG 61.191 66.667 0.00 0.00 33.72 4.18
298 299 3.138798 GACAGTCGCCGGCTCCTA 61.139 66.667 26.68 3.97 0.00 2.94
299 300 3.127352 GACAGTCGCCGGCTCCTAG 62.127 68.421 26.68 12.84 0.00 3.02
300 301 2.829003 CAGTCGCCGGCTCCTAGA 60.829 66.667 26.68 11.29 0.00 2.43
301 302 2.044252 AGTCGCCGGCTCCTAGAA 60.044 61.111 26.68 0.00 0.00 2.10
302 303 2.122167 AGTCGCCGGCTCCTAGAAG 61.122 63.158 26.68 6.06 0.00 2.85
303 304 3.528370 TCGCCGGCTCCTAGAAGC 61.528 66.667 26.68 0.00 41.73 3.86
310 311 2.532854 GCTCCTAGAAGCCCATGGA 58.467 57.895 15.22 0.00 36.22 3.41
335 336 2.606519 CGTGGGAGGAGGGGTTGA 60.607 66.667 0.00 0.00 0.00 3.18
354 355 4.078516 GTTCGGCGGTGGCTAGGT 62.079 66.667 7.21 0.00 39.81 3.08
372 373 1.470805 GGTTTTGCGTCCAACTTGCTT 60.471 47.619 0.00 0.00 0.00 3.91
379 380 0.386838 GTCCAACTTGCTTGCTTGCT 59.613 50.000 3.47 0.00 0.00 3.91
380 381 1.113788 TCCAACTTGCTTGCTTGCTT 58.886 45.000 3.47 0.00 0.00 3.91
430 440 0.243907 AGATGGTGAGTGAACCGACG 59.756 55.000 0.00 0.00 43.73 5.12
432 442 2.048503 GGTGAGTGAACCGACGGG 60.049 66.667 20.00 0.00 40.11 5.28
475 486 2.737376 GGCGAGTCAACCCGTGTC 60.737 66.667 0.00 0.00 0.00 3.67
488 499 1.488812 CCCGTGTCCCTAATCATCCAA 59.511 52.381 0.00 0.00 0.00 3.53
494 505 5.391950 CGTGTCCCTAATCATCCAACTTTTG 60.392 44.000 0.00 0.00 0.00 2.44
569 580 2.478134 CACGCAGAAACTCAGAAGAAGG 59.522 50.000 0.00 0.00 0.00 3.46
572 583 3.333804 GCAGAAACTCAGAAGAAGGAGG 58.666 50.000 0.00 0.00 35.45 4.30
575 586 3.260632 AGAAACTCAGAAGAAGGAGGAGC 59.739 47.826 0.00 0.00 35.45 4.70
576 587 1.567357 ACTCAGAAGAAGGAGGAGCC 58.433 55.000 0.00 0.00 35.45 4.70
577 588 0.459489 CTCAGAAGAAGGAGGAGCCG 59.541 60.000 0.00 0.00 43.43 5.52
745 784 1.604593 CCCTCACCAAACCAGCCAG 60.605 63.158 0.00 0.00 0.00 4.85
746 785 1.455849 CCTCACCAAACCAGCCAGA 59.544 57.895 0.00 0.00 0.00 3.86
760 799 1.008206 AGCCAGACCATCTCTCTCCTT 59.992 52.381 0.00 0.00 0.00 3.36
771 814 2.509548 TCTCTCTCCTTCTCCCTCTCTG 59.490 54.545 0.00 0.00 0.00 3.35
772 815 1.064017 TCTCTCCTTCTCCCTCTCTGC 60.064 57.143 0.00 0.00 0.00 4.26
773 816 0.032615 TCTCCTTCTCCCTCTCTGCC 60.033 60.000 0.00 0.00 0.00 4.85
774 817 1.002274 TCCTTCTCCCTCTCTGCCC 59.998 63.158 0.00 0.00 0.00 5.36
775 818 1.306482 CCTTCTCCCTCTCTGCCCA 60.306 63.158 0.00 0.00 0.00 5.36
776 819 1.621672 CCTTCTCCCTCTCTGCCCAC 61.622 65.000 0.00 0.00 0.00 4.61
944 995 2.676822 AAGCTGTCGCCGAGGAGA 60.677 61.111 0.00 0.00 36.60 3.71
955 1006 2.306847 GCCGAGGAGAAAGAGAGAGAT 58.693 52.381 0.00 0.00 0.00 2.75
956 1007 2.693074 GCCGAGGAGAAAGAGAGAGATT 59.307 50.000 0.00 0.00 0.00 2.40
962 1013 6.078456 AGGAGAAAGAGAGAGATTGAGAGA 57.922 41.667 0.00 0.00 0.00 3.10
968 1032 3.202818 AGAGAGAGATTGAGAGAGGCAGA 59.797 47.826 0.00 0.00 0.00 4.26
969 1033 3.559069 AGAGAGATTGAGAGAGGCAGAG 58.441 50.000 0.00 0.00 0.00 3.35
982 1046 2.735634 GCAGAGAGCAGTTCGTCAG 58.264 57.895 0.00 0.00 44.79 3.51
983 1047 0.038709 GCAGAGAGCAGTTCGTCAGT 60.039 55.000 0.00 0.00 44.79 3.41
985 1049 2.323959 CAGAGAGCAGTTCGTCAGTTC 58.676 52.381 0.00 0.00 0.00 3.01
986 1050 1.068885 AGAGAGCAGTTCGTCAGTTCG 60.069 52.381 0.00 0.00 0.00 3.95
987 1051 0.669077 AGAGCAGTTCGTCAGTTCGT 59.331 50.000 0.00 0.00 0.00 3.85
988 1052 1.053811 GAGCAGTTCGTCAGTTCGTC 58.946 55.000 0.00 0.00 0.00 4.20
989 1053 0.660595 AGCAGTTCGTCAGTTCGTCG 60.661 55.000 0.00 0.00 0.00 5.12
990 1054 0.933509 GCAGTTCGTCAGTTCGTCGT 60.934 55.000 0.00 0.00 0.00 4.34
991 1055 1.043224 CAGTTCGTCAGTTCGTCGTC 58.957 55.000 0.00 0.00 0.00 4.20
994 1058 0.110956 TTCGTCAGTTCGTCGTCTCG 60.111 55.000 0.00 0.00 0.00 4.04
1105 1174 1.741394 GCCATTTCCAAGCTTGCATCC 60.741 52.381 21.43 1.37 0.00 3.51
1149 1228 0.668401 TGCTGTGCTGTGTGATCGAG 60.668 55.000 0.00 0.00 0.00 4.04
1158 1237 3.774066 CTGTGTGATCGAGCAGAATGTA 58.226 45.455 2.20 0.00 39.31 2.29
1164 1259 2.736144 TCGAGCAGAATGTACCGTTT 57.264 45.000 0.00 0.00 39.31 3.60
1173 1268 4.794762 CAGAATGTACCGTTTGATGCATTG 59.205 41.667 0.00 0.00 0.00 2.82
1175 1270 2.509569 TGTACCGTTTGATGCATTGGT 58.490 42.857 0.00 7.16 0.00 3.67
1177 1272 2.723124 ACCGTTTGATGCATTGGTTC 57.277 45.000 0.00 0.00 0.00 3.62
1179 1274 1.068610 CCGTTTGATGCATTGGTTCGT 60.069 47.619 0.00 0.00 0.00 3.85
1180 1275 2.241722 CGTTTGATGCATTGGTTCGTC 58.758 47.619 0.00 0.00 0.00 4.20
1197 1292 1.805120 CGTCGTTCCAGTGTTCTTGGT 60.805 52.381 0.00 0.00 0.00 3.67
1201 1296 2.032924 CGTTCCAGTGTTCTTGGTTTCC 59.967 50.000 0.00 0.00 0.00 3.13
1227 1326 5.491982 CACTAGGCTAGATTTGTTCTTGGT 58.508 41.667 27.59 0.00 35.79 3.67
1231 1330 3.826729 GGCTAGATTTGTTCTTGGTTGGT 59.173 43.478 0.00 0.00 35.79 3.67
1241 1340 3.053831 TCTTGGTTGGTCTTTCGATCC 57.946 47.619 0.00 0.00 0.00 3.36
1252 1351 3.806521 GTCTTTCGATCCATGTCCATCTG 59.193 47.826 0.00 0.00 0.00 2.90
1258 1357 4.132336 CGATCCATGTCCATCTGTCAAAT 58.868 43.478 0.00 0.00 0.00 2.32
1261 1360 6.073385 CGATCCATGTCCATCTGTCAAATTAG 60.073 42.308 0.00 0.00 0.00 1.73
1264 1363 6.599244 TCCATGTCCATCTGTCAAATTAGTTC 59.401 38.462 0.00 0.00 0.00 3.01
1267 1366 7.009179 TGTCCATCTGTCAAATTAGTTCTCT 57.991 36.000 0.00 0.00 0.00 3.10
1279 1378 9.265901 TCAAATTAGTTCTCTCTCTGAAACAAG 57.734 33.333 0.00 0.00 0.00 3.16
1331 1433 8.405531 CACAAGAAACTATCCTTTTCTTCACAA 58.594 33.333 7.03 0.00 45.89 3.33
1334 1436 9.847224 AAGAAACTATCCTTTTCTTCACAAGTA 57.153 29.630 4.59 0.00 45.89 2.24
1335 1437 9.274206 AGAAACTATCCTTTTCTTCACAAGTAC 57.726 33.333 0.00 0.00 39.77 2.73
1336 1438 9.274206 GAAACTATCCTTTTCTTCACAAGTACT 57.726 33.333 0.00 0.00 31.39 2.73
1358 1460 7.527084 ACTACAAATCTTTTCTCGAGTATGC 57.473 36.000 13.13 0.00 0.00 3.14
1372 1474 4.870426 TCGAGTATGCATTCTTGGTCTTTC 59.130 41.667 17.73 0.00 0.00 2.62
1374 1476 5.220548 CGAGTATGCATTCTTGGTCTTTCTG 60.221 44.000 3.54 0.00 0.00 3.02
1375 1477 3.863142 ATGCATTCTTGGTCTTTCTGC 57.137 42.857 0.00 0.00 0.00 4.26
1379 1481 0.112412 TTCTTGGTCTTTCTGCCCCC 59.888 55.000 0.00 0.00 0.00 5.40
1380 1482 0.772124 TCTTGGTCTTTCTGCCCCCT 60.772 55.000 0.00 0.00 0.00 4.79
1381 1483 0.991920 CTTGGTCTTTCTGCCCCCTA 59.008 55.000 0.00 0.00 0.00 3.53
1412 1514 5.741982 AGATTTTCTTGTGTTTGCGTTACAC 59.258 36.000 8.38 8.38 44.73 2.90
1438 1540 6.653989 AGTATTTTCTACCCCTGATGAACTG 58.346 40.000 0.00 0.00 0.00 3.16
1440 1542 4.553330 TTTCTACCCCTGATGAACTGAC 57.447 45.455 0.00 0.00 0.00 3.51
1441 1543 3.474798 TCTACCCCTGATGAACTGACT 57.525 47.619 0.00 0.00 0.00 3.41
1446 1548 3.244700 ACCCCTGATGAACTGACTTTGAG 60.245 47.826 0.00 0.00 0.00 3.02
1449 1551 3.436015 CCTGATGAACTGACTTTGAGCTG 59.564 47.826 0.00 0.00 0.00 4.24
1525 1661 0.321564 TGAGGCATTTGACCGGTGAG 60.322 55.000 14.63 0.00 0.00 3.51
1527 1663 2.700773 GGCATTTGACCGGTGAGGC 61.701 63.158 14.63 11.32 46.52 4.70
1540 1680 2.176792 GAGGCGAAAAAGCTGGCG 59.823 61.111 0.00 0.00 37.29 5.69
1619 1762 6.293135 GGATCATAGGATTCTTTTCTGTTCGC 60.293 42.308 0.00 0.00 32.67 4.70
1620 1763 4.876107 TCATAGGATTCTTTTCTGTTCGCC 59.124 41.667 0.00 0.00 0.00 5.54
1622 1765 1.465856 GGATTCTTTTCTGTTCGCCGC 60.466 52.381 0.00 0.00 0.00 6.53
1651 1820 7.748847 AGTATTTTACCTGTAAAGTTGCGATG 58.251 34.615 3.59 0.00 36.52 3.84
1652 1821 4.413495 TTTACCTGTAAAGTTGCGATGC 57.587 40.909 0.00 0.00 31.95 3.91
1682 1852 5.526506 AATGCTGCTTGTTTTCTCTTCTT 57.473 34.783 0.00 0.00 0.00 2.52
1728 1909 4.073293 TCTTGGACTTCACACCTCTTTC 57.927 45.455 0.00 0.00 0.00 2.62
1739 1920 9.362151 ACTTCACACCTCTTTCCATTATTTTTA 57.638 29.630 0.00 0.00 0.00 1.52
1741 1922 8.934023 TCACACCTCTTTCCATTATTTTTAGT 57.066 30.769 0.00 0.00 0.00 2.24
1744 1925 8.803235 ACACCTCTTTCCATTATTTTTAGTTCC 58.197 33.333 0.00 0.00 0.00 3.62
1745 1926 8.251026 CACCTCTTTCCATTATTTTTAGTTCCC 58.749 37.037 0.00 0.00 0.00 3.97
1747 1928 7.122204 CCTCTTTCCATTATTTTTAGTTCCCGT 59.878 37.037 0.00 0.00 0.00 5.28
1749 1930 8.301002 TCTTTCCATTATTTTTAGTTCCCGTTG 58.699 33.333 0.00 0.00 0.00 4.10
1751 1932 6.246919 TCCATTATTTTTAGTTCCCGTTGGA 58.753 36.000 0.00 0.00 39.54 3.53
1795 1980 5.178996 CCTCAACAAGAATGTTCTCTCACTG 59.821 44.000 0.00 0.00 46.78 3.66
1851 2040 8.814931 TGGAGAATGTTTGGTAAATCAATCAAT 58.185 29.630 0.00 0.00 32.34 2.57
1869 2059 6.806388 ATCAATTTTTGGGAAAATGCTGTC 57.194 33.333 0.00 0.00 42.97 3.51
1930 2120 3.676172 CACGGCGTGTCAAAAGTATCTTA 59.324 43.478 30.56 0.00 0.00 2.10
2004 2194 2.419324 CTCAGCTTCTTCCATGTCTTGC 59.581 50.000 0.00 0.00 0.00 4.01
2010 2200 2.416747 TCTTCCATGTCTTGCTCAACG 58.583 47.619 0.00 0.00 0.00 4.10
2011 2201 2.037121 TCTTCCATGTCTTGCTCAACGA 59.963 45.455 0.00 0.00 0.00 3.85
2013 2203 3.057969 TCCATGTCTTGCTCAACGATT 57.942 42.857 0.00 0.00 0.00 3.34
2014 2204 4.200838 TCCATGTCTTGCTCAACGATTA 57.799 40.909 0.00 0.00 0.00 1.75
2015 2205 4.769688 TCCATGTCTTGCTCAACGATTAT 58.230 39.130 0.00 0.00 0.00 1.28
2016 2206 4.571984 TCCATGTCTTGCTCAACGATTATG 59.428 41.667 0.00 0.00 0.00 1.90
2017 2207 4.333649 CCATGTCTTGCTCAACGATTATGT 59.666 41.667 0.00 0.00 0.00 2.29
2018 2208 5.523552 CCATGTCTTGCTCAACGATTATGTA 59.476 40.000 0.00 0.00 0.00 2.29
2025 2217 7.701078 TCTTGCTCAACGATTATGTAGTAACTC 59.299 37.037 0.00 0.00 0.00 3.01
2042 2234 4.383850 AACTCTGAACAGATCATCCTCG 57.616 45.455 4.96 0.00 37.44 4.63
2157 2354 5.461032 TCTGCGTTTTACCCATTGAAATT 57.539 34.783 0.00 0.00 0.00 1.82
2161 2358 7.757624 TCTGCGTTTTACCCATTGAAATTATTC 59.242 33.333 0.00 0.00 36.04 1.75
2177 2374 9.224267 TGAAATTATTCCTGCTATATCTGAAGC 57.776 33.333 0.00 0.00 35.64 3.86
2178 2375 8.572855 AAATTATTCCTGCTATATCTGAAGCC 57.427 34.615 0.00 0.00 37.97 4.35
2179 2376 6.686484 TTATTCCTGCTATATCTGAAGCCA 57.314 37.500 0.00 0.00 37.97 4.75
2182 2379 3.262660 TCCTGCTATATCTGAAGCCATGG 59.737 47.826 7.63 7.63 37.97 3.66
2183 2380 3.008813 CCTGCTATATCTGAAGCCATGGT 59.991 47.826 14.67 0.00 37.97 3.55
2184 2381 4.252073 CTGCTATATCTGAAGCCATGGTC 58.748 47.826 14.67 4.33 37.97 4.02
2185 2382 3.647590 TGCTATATCTGAAGCCATGGTCA 59.352 43.478 14.67 9.27 37.97 4.02
2186 2383 4.252073 GCTATATCTGAAGCCATGGTCAG 58.748 47.826 21.18 21.18 42.23 3.51
2189 2386 2.704464 TCTGAAGCCATGGTCAGATG 57.296 50.000 24.31 7.19 44.12 2.90
2190 2387 2.190538 TCTGAAGCCATGGTCAGATGA 58.809 47.619 24.31 9.08 44.12 2.92
2191 2388 2.775960 TCTGAAGCCATGGTCAGATGAT 59.224 45.455 24.31 0.33 44.12 2.45
2192 2389 2.879026 CTGAAGCCATGGTCAGATGATG 59.121 50.000 22.24 0.68 43.32 3.07
2193 2390 2.228059 GAAGCCATGGTCAGATGATGG 58.772 52.381 14.67 6.36 39.84 3.51
2194 2391 1.219773 AGCCATGGTCAGATGATGGT 58.780 50.000 14.67 0.00 39.17 3.55
2195 2392 1.142465 AGCCATGGTCAGATGATGGTC 59.858 52.381 14.67 0.00 39.17 4.02
2196 2393 1.142465 GCCATGGTCAGATGATGGTCT 59.858 52.381 14.67 0.00 39.17 3.85
2197 2394 2.422519 GCCATGGTCAGATGATGGTCTT 60.423 50.000 14.67 0.00 39.17 3.01
2198 2395 3.211865 CCATGGTCAGATGATGGTCTTG 58.788 50.000 2.57 0.00 33.26 3.02
2199 2396 3.211865 CATGGTCAGATGATGGTCTTGG 58.788 50.000 0.00 0.00 0.00 3.61
2204 2401 0.842635 AGATGATGGTCTTGGGCTCC 59.157 55.000 0.00 0.00 0.00 4.70
2268 2474 3.044059 GAGCACACCGCAAGATGCC 62.044 63.158 0.00 0.00 46.13 4.40
2280 2486 1.915614 AAGATGCCGCTGCGTTTCAG 61.916 55.000 21.59 6.08 45.62 3.02
2324 2530 2.752903 ACTTGTAATTTGGATCCACGCC 59.247 45.455 15.91 1.46 0.00 5.68
2350 2556 2.910199 CCGCTCAGAATCTTTCCATGA 58.090 47.619 0.00 0.00 0.00 3.07
2369 2575 2.952978 TGAGTTCCTCTAGATCGGCTTC 59.047 50.000 0.00 0.00 0.00 3.86
2589 2811 0.825425 TTCCGCTGGTTTCAATGGCA 60.825 50.000 0.00 0.00 0.00 4.92
2609 2831 3.365820 GCAGCTGTAATTTTGATGTGTGC 59.634 43.478 16.64 0.00 0.00 4.57
2853 3075 2.358737 GGACGTGGACAAGGGCAG 60.359 66.667 0.00 0.00 0.00 4.85
3037 3259 3.357079 GGCAGCTTGGTGTGGTCG 61.357 66.667 0.00 0.00 0.00 4.79
3079 3301 1.532090 GCGTCGTCTGATGAGATCGTT 60.532 52.381 0.00 0.00 32.56 3.85
3085 3307 1.410517 TCTGATGAGATCGTTGAGGCC 59.589 52.381 0.00 0.00 0.00 5.19
3106 3328 4.379143 CGGTGCTCGTCGTCGTCA 62.379 66.667 1.33 0.00 38.33 4.35
3520 3742 1.210413 CGATCTCCTGATACCCGCG 59.790 63.158 0.00 0.00 32.19 6.46
3641 3863 0.316204 GTTTGAGACGAACGGGGAGA 59.684 55.000 0.00 0.00 0.00 3.71
3763 3985 2.284625 ACCTCCATGCCCGAGTCA 60.285 61.111 0.00 0.00 0.00 3.41
4642 4902 0.179119 GGACCAAATGCTGCATGCTC 60.179 55.000 20.33 11.24 43.37 4.26
4665 4925 5.656416 TCACTTCAATTCAGGGTCTGTTTTT 59.344 36.000 0.00 0.00 32.61 1.94
4756 5016 1.852942 TCTTTGATACGATCGGCTGC 58.147 50.000 20.98 6.33 0.00 5.25
4775 5035 5.239525 GGCTGCTCTTTCTTTTTCTGTCTTA 59.760 40.000 0.00 0.00 0.00 2.10
4797 5060 1.696988 GCAAAAGGTATGGTTGTGCG 58.303 50.000 0.00 0.00 0.00 5.34
4802 5065 4.174129 GTATGGTTGTGCGGCGGC 62.174 66.667 9.78 9.68 40.52 6.53
4820 5083 2.552031 GGCGTCCTGGAATTTCTAGAC 58.448 52.381 11.03 7.42 0.00 2.59
4825 5088 4.401519 CGTCCTGGAATTTCTAGACCAGTA 59.598 45.833 20.18 7.18 45.65 2.74
4828 5091 5.964477 TCCTGGAATTTCTAGACCAGTACAT 59.036 40.000 20.18 0.00 45.65 2.29
4831 5094 6.406370 TGGAATTTCTAGACCAGTACATGTG 58.594 40.000 9.11 0.00 0.00 3.21
4835 5098 4.245251 TCTAGACCAGTACATGTGGCTA 57.755 45.455 9.11 2.25 38.83 3.93
4836 5099 4.207955 TCTAGACCAGTACATGTGGCTAG 58.792 47.826 14.78 14.78 40.04 3.42
4837 5100 1.482593 AGACCAGTACATGTGGCTAGC 59.517 52.381 9.11 6.04 38.83 3.42
4838 5101 0.541863 ACCAGTACATGTGGCTAGCC 59.458 55.000 27.71 27.71 38.83 3.93
4842 5105 0.387929 GTACATGTGGCTAGCCGCTA 59.612 55.000 39.28 28.28 46.12 4.26
4847 5110 1.005630 GTGGCTAGCCGCTAGGATG 60.006 63.158 35.04 4.95 42.89 3.51
4858 5121 1.949525 CGCTAGGATGGTGGAAAATGG 59.050 52.381 0.00 0.00 0.00 3.16
4867 5130 3.226777 TGGTGGAAAATGGTGACGATTT 58.773 40.909 0.00 0.00 0.00 2.17
4878 5141 7.921786 AATGGTGACGATTTTAGATGAAAGA 57.078 32.000 0.00 0.00 0.00 2.52
4879 5142 6.721571 TGGTGACGATTTTAGATGAAAGAC 57.278 37.500 0.00 0.00 0.00 3.01
4881 5144 6.934645 TGGTGACGATTTTAGATGAAAGACTT 59.065 34.615 0.00 0.00 0.00 3.01
4921 5184 9.632807 TTTTGAATTAATAAAGTCATCAACCGG 57.367 29.630 0.00 0.00 39.27 5.28
4922 5185 6.791303 TGAATTAATAAAGTCATCAACCGGC 58.209 36.000 0.00 0.00 34.93 6.13
4925 5188 2.107950 TAAAGTCATCAACCGGCCAG 57.892 50.000 0.00 0.00 0.00 4.85
4926 5189 0.110486 AAAGTCATCAACCGGCCAGT 59.890 50.000 0.00 0.00 0.00 4.00
4927 5190 0.606401 AAGTCATCAACCGGCCAGTG 60.606 55.000 0.00 0.00 0.00 3.66
4935 5198 2.006888 CAACCGGCCAGTGTTACATAG 58.993 52.381 0.00 0.00 0.00 2.23
4936 5199 0.539986 ACCGGCCAGTGTTACATAGG 59.460 55.000 0.00 2.33 0.00 2.57
4939 5202 0.254747 GGCCAGTGTTACATAGGGCA 59.745 55.000 21.19 0.00 43.09 5.36
4941 5204 1.743394 GCCAGTGTTACATAGGGCAAC 59.257 52.381 16.20 0.00 41.02 4.17
4961 5225 3.062042 ACCATAAAACAGTCGACCGAAC 58.938 45.455 13.01 0.00 0.00 3.95
4964 5228 2.144482 AAAACAGTCGACCGAACGAT 57.856 45.000 13.01 0.00 43.93 3.73
4972 5236 1.064505 TCGACCGAACGATACATGGAC 59.935 52.381 0.00 0.00 37.37 4.02
4973 5237 1.202211 CGACCGAACGATACATGGACA 60.202 52.381 0.00 0.00 35.09 4.02
4974 5238 2.543031 CGACCGAACGATACATGGACAT 60.543 50.000 0.00 0.00 35.09 3.06
4984 5248 5.011023 ACGATACATGGACATGATAGAGCAA 59.989 40.000 18.38 0.00 41.20 3.91
4986 5250 4.767578 ACATGGACATGATAGAGCAACT 57.232 40.909 18.38 0.00 41.20 3.16
4990 5254 5.675684 TGGACATGATAGAGCAACTTACA 57.324 39.130 0.00 0.00 0.00 2.41
4994 5258 6.369059 ACATGATAGAGCAACTTACAATGC 57.631 37.500 0.00 0.00 42.87 3.56
5003 5267 4.050553 GCAACTTACAATGCAACACACAT 58.949 39.130 0.00 0.00 42.12 3.21
5063 5327 6.363357 CGATAATTGATTGATCGTGCACTAGA 59.637 38.462 16.19 6.05 38.10 2.43
5093 5359 0.251922 TAGGTACAAGGGGTGCGACT 60.252 55.000 0.00 0.00 32.16 4.18
5403 5671 1.767692 GGTGATGGACAGGGTTGGT 59.232 57.895 0.00 0.00 0.00 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.870426 TGAGATGAAAACTACGGATCAAGC 59.130 41.667 0.00 0.00 0.00 4.01
1 2 5.292101 GGTGAGATGAAAACTACGGATCAAG 59.708 44.000 0.00 0.00 0.00 3.02
2 3 5.175859 GGTGAGATGAAAACTACGGATCAA 58.824 41.667 0.00 0.00 0.00 2.57
3 4 4.676986 CGGTGAGATGAAAACTACGGATCA 60.677 45.833 0.00 0.00 0.00 2.92
4 5 3.797256 CGGTGAGATGAAAACTACGGATC 59.203 47.826 0.00 0.00 0.00 3.36
5 6 3.782046 CGGTGAGATGAAAACTACGGAT 58.218 45.455 0.00 0.00 0.00 4.18
6 7 2.673043 GCGGTGAGATGAAAACTACGGA 60.673 50.000 0.00 0.00 0.00 4.69
7 8 1.659098 GCGGTGAGATGAAAACTACGG 59.341 52.381 0.00 0.00 0.00 4.02
8 9 1.659098 GGCGGTGAGATGAAAACTACG 59.341 52.381 0.00 0.00 0.00 3.51
9 10 1.659098 CGGCGGTGAGATGAAAACTAC 59.341 52.381 0.00 0.00 0.00 2.73
10 11 1.546923 TCGGCGGTGAGATGAAAACTA 59.453 47.619 7.21 0.00 0.00 2.24
11 12 0.320374 TCGGCGGTGAGATGAAAACT 59.680 50.000 7.21 0.00 0.00 2.66
12 13 1.153353 TTCGGCGGTGAGATGAAAAC 58.847 50.000 7.21 0.00 0.00 2.43
13 14 1.885560 TTTCGGCGGTGAGATGAAAA 58.114 45.000 7.21 0.00 0.00 2.29
14 15 2.107950 ATTTCGGCGGTGAGATGAAA 57.892 45.000 7.21 0.00 33.56 2.69
15 16 2.006888 GAATTTCGGCGGTGAGATGAA 58.993 47.619 7.21 0.00 0.00 2.57
16 17 1.651987 GAATTTCGGCGGTGAGATGA 58.348 50.000 7.21 0.00 0.00 2.92
17 18 0.301687 CGAATTTCGGCGGTGAGATG 59.698 55.000 7.21 0.00 36.00 2.90
18 19 1.429148 GCGAATTTCGGCGGTGAGAT 61.429 55.000 19.53 0.00 40.84 2.75
19 20 2.098233 GCGAATTTCGGCGGTGAGA 61.098 57.895 19.53 0.00 40.84 3.27
20 21 1.705337 ATGCGAATTTCGGCGGTGAG 61.705 55.000 19.53 0.00 40.84 3.51
21 22 0.460459 TATGCGAATTTCGGCGGTGA 60.460 50.000 19.53 0.00 40.84 4.02
22 23 0.586319 ATATGCGAATTTCGGCGGTG 59.414 50.000 19.53 0.00 40.84 4.94
23 24 0.865769 GATATGCGAATTTCGGCGGT 59.134 50.000 19.53 8.05 40.84 5.68
24 25 0.179250 CGATATGCGAATTTCGGCGG 60.179 55.000 19.53 0.00 44.57 6.13
25 26 3.258498 CGATATGCGAATTTCGGCG 57.742 52.632 19.53 0.00 44.57 6.46
42 43 3.142951 AGGGTACATCTCTCGAGATTCG 58.857 50.000 17.03 9.43 45.31 3.34
43 44 4.023536 GTGAGGGTACATCTCTCGAGATTC 60.024 50.000 17.03 0.00 45.31 2.52
44 45 3.886505 GTGAGGGTACATCTCTCGAGATT 59.113 47.826 17.03 3.72 45.31 2.40
45 46 3.482436 GTGAGGGTACATCTCTCGAGAT 58.518 50.000 17.03 3.23 46.09 2.75
46 47 2.742204 CGTGAGGGTACATCTCTCGAGA 60.742 54.545 23.36 15.70 46.09 4.04
47 48 1.600013 CGTGAGGGTACATCTCTCGAG 59.400 57.143 23.36 5.93 46.09 4.04
48 49 1.208776 TCGTGAGGGTACATCTCTCGA 59.791 52.381 24.93 24.93 46.09 4.04
49 50 1.664873 TCGTGAGGGTACATCTCTCG 58.335 55.000 22.49 22.49 46.09 4.04
50 51 3.065648 GTCTTCGTGAGGGTACATCTCTC 59.934 52.174 14.02 10.52 43.58 3.20
51 52 3.018149 GTCTTCGTGAGGGTACATCTCT 58.982 50.000 14.02 0.00 32.78 3.10
52 53 2.099427 GGTCTTCGTGAGGGTACATCTC 59.901 54.545 8.10 8.10 0.00 2.75
53 54 2.100989 GGTCTTCGTGAGGGTACATCT 58.899 52.381 0.00 0.00 0.00 2.90
54 55 2.100989 AGGTCTTCGTGAGGGTACATC 58.899 52.381 0.00 0.00 0.00 3.06
55 56 2.233305 AGGTCTTCGTGAGGGTACAT 57.767 50.000 0.00 0.00 0.00 2.29
56 57 2.005370 AAGGTCTTCGTGAGGGTACA 57.995 50.000 0.00 0.00 0.00 2.90
57 58 2.670509 CGAAAGGTCTTCGTGAGGGTAC 60.671 54.545 0.00 0.00 37.18 3.34
58 59 1.542915 CGAAAGGTCTTCGTGAGGGTA 59.457 52.381 0.00 0.00 37.18 3.69
59 60 0.317479 CGAAAGGTCTTCGTGAGGGT 59.683 55.000 0.00 0.00 37.18 4.34
60 61 3.123674 CGAAAGGTCTTCGTGAGGG 57.876 57.895 0.00 0.00 37.18 4.30
93 94 3.376935 AATCTCCTGCGCCTCCACG 62.377 63.158 4.18 0.00 0.00 4.94
94 95 1.817099 CAATCTCCTGCGCCTCCAC 60.817 63.158 4.18 0.00 0.00 4.02
95 96 2.586245 CAATCTCCTGCGCCTCCA 59.414 61.111 4.18 0.00 0.00 3.86
96 97 2.899339 GCAATCTCCTGCGCCTCC 60.899 66.667 4.18 0.00 31.50 4.30
103 104 3.806380 ACTATTCTGCAGCAATCTCCTG 58.194 45.455 9.47 2.73 0.00 3.86
104 105 5.549347 CATACTATTCTGCAGCAATCTCCT 58.451 41.667 9.47 0.00 0.00 3.69
105 106 4.153835 GCATACTATTCTGCAGCAATCTCC 59.846 45.833 9.47 0.00 38.28 3.71
106 107 4.753610 TGCATACTATTCTGCAGCAATCTC 59.246 41.667 9.47 0.00 43.11 2.75
107 108 4.711399 TGCATACTATTCTGCAGCAATCT 58.289 39.130 9.47 2.36 43.11 2.40
114 115 3.737972 CGGTGTCTGCATACTATTCTGCA 60.738 47.826 3.71 0.00 45.60 4.41
115 116 2.797156 CGGTGTCTGCATACTATTCTGC 59.203 50.000 3.71 0.00 38.87 4.26
116 117 2.797156 GCGGTGTCTGCATACTATTCTG 59.203 50.000 3.71 0.00 0.00 3.02
117 118 2.224066 GGCGGTGTCTGCATACTATTCT 60.224 50.000 3.71 0.00 0.00 2.40
118 119 2.135933 GGCGGTGTCTGCATACTATTC 58.864 52.381 3.71 0.00 0.00 1.75
119 120 1.484653 TGGCGGTGTCTGCATACTATT 59.515 47.619 3.71 0.00 0.00 1.73
120 121 1.119684 TGGCGGTGTCTGCATACTAT 58.880 50.000 3.71 0.00 0.00 2.12
121 122 0.174845 GTGGCGGTGTCTGCATACTA 59.825 55.000 3.71 0.00 0.00 1.82
122 123 1.079127 GTGGCGGTGTCTGCATACT 60.079 57.895 3.71 0.00 0.00 2.12
123 124 2.106683 GGTGGCGGTGTCTGCATAC 61.107 63.158 3.03 0.00 0.00 2.39
124 125 2.267642 GGTGGCGGTGTCTGCATA 59.732 61.111 3.03 0.00 0.00 3.14
125 126 3.640407 AGGTGGCGGTGTCTGCAT 61.640 61.111 3.03 0.00 0.00 3.96
126 127 4.624364 CAGGTGGCGGTGTCTGCA 62.624 66.667 3.03 0.00 0.00 4.41
127 128 3.612247 ATCAGGTGGCGGTGTCTGC 62.612 63.158 0.00 0.00 0.00 4.26
128 129 1.448540 GATCAGGTGGCGGTGTCTG 60.449 63.158 0.00 0.00 0.00 3.51
129 130 2.982130 GATCAGGTGGCGGTGTCT 59.018 61.111 0.00 0.00 0.00 3.41
130 131 2.509336 CGATCAGGTGGCGGTGTC 60.509 66.667 0.00 0.00 0.00 3.67
131 132 2.994995 TCGATCAGGTGGCGGTGT 60.995 61.111 0.00 0.00 0.00 4.16
132 133 2.509336 GTCGATCAGGTGGCGGTG 60.509 66.667 0.00 0.00 0.00 4.94
133 134 3.771160 GGTCGATCAGGTGGCGGT 61.771 66.667 0.00 0.00 0.00 5.68
134 135 4.873129 CGGTCGATCAGGTGGCGG 62.873 72.222 0.00 0.00 0.00 6.13
135 136 4.873129 CCGGTCGATCAGGTGGCG 62.873 72.222 0.00 0.00 0.00 5.69
136 137 4.530857 CCCGGTCGATCAGGTGGC 62.531 72.222 0.00 0.00 0.00 5.01
137 138 3.075005 ACCCGGTCGATCAGGTGG 61.075 66.667 1.82 0.00 0.00 4.61
138 139 2.052690 AGACCCGGTCGATCAGGTG 61.053 63.158 8.71 1.51 37.67 4.00
139 140 2.052690 CAGACCCGGTCGATCAGGT 61.053 63.158 2.36 2.36 37.67 4.00
140 141 2.786495 CCAGACCCGGTCGATCAGG 61.786 68.421 12.04 0.00 37.67 3.86
141 142 1.109920 ATCCAGACCCGGTCGATCAG 61.110 60.000 12.04 1.05 37.67 2.90
142 143 1.076265 ATCCAGACCCGGTCGATCA 60.076 57.895 12.04 0.00 37.67 2.92
143 144 1.107538 TGATCCAGACCCGGTCGATC 61.108 60.000 20.53 20.53 37.67 3.69
144 145 1.076265 TGATCCAGACCCGGTCGAT 60.076 57.895 12.04 9.51 37.67 3.59
145 146 2.050350 GTGATCCAGACCCGGTCGA 61.050 63.158 12.04 4.83 37.67 4.20
146 147 2.494918 GTGATCCAGACCCGGTCG 59.505 66.667 12.04 7.12 37.67 4.79
147 148 1.987855 TGGTGATCCAGACCCGGTC 60.988 63.158 9.81 9.81 39.03 4.79
148 149 2.121832 TGGTGATCCAGACCCGGT 59.878 61.111 0.00 0.00 39.03 5.28
149 150 2.584608 GTGGTGATCCAGACCCGG 59.415 66.667 0.00 0.00 45.24 5.73
150 151 2.290287 TGGTGGTGATCCAGACCCG 61.290 63.158 0.00 0.00 45.24 5.28
151 152 1.201429 AGTGGTGGTGATCCAGACCC 61.201 60.000 0.00 0.00 45.24 4.46
152 153 1.568504 TAGTGGTGGTGATCCAGACC 58.431 55.000 0.00 0.00 45.24 3.85
153 154 2.678190 GCTTAGTGGTGGTGATCCAGAC 60.678 54.545 0.00 0.00 45.24 3.51
154 155 1.555075 GCTTAGTGGTGGTGATCCAGA 59.445 52.381 0.00 0.00 45.24 3.86
155 156 1.407437 GGCTTAGTGGTGGTGATCCAG 60.407 57.143 0.00 0.00 45.24 3.86
156 157 0.618458 GGCTTAGTGGTGGTGATCCA 59.382 55.000 0.00 0.00 42.05 3.41
157 158 0.618458 TGGCTTAGTGGTGGTGATCC 59.382 55.000 0.00 0.00 0.00 3.36
158 159 2.717639 ATGGCTTAGTGGTGGTGATC 57.282 50.000 0.00 0.00 0.00 2.92
159 160 2.308570 TGAATGGCTTAGTGGTGGTGAT 59.691 45.455 0.00 0.00 0.00 3.06
160 161 1.702401 TGAATGGCTTAGTGGTGGTGA 59.298 47.619 0.00 0.00 0.00 4.02
161 162 2.086869 CTGAATGGCTTAGTGGTGGTG 58.913 52.381 0.00 0.00 0.00 4.17
162 163 1.985159 TCTGAATGGCTTAGTGGTGGT 59.015 47.619 0.00 0.00 0.00 4.16
163 164 2.787473 TCTGAATGGCTTAGTGGTGG 57.213 50.000 0.00 0.00 0.00 4.61
164 165 3.209410 GGATCTGAATGGCTTAGTGGTG 58.791 50.000 0.00 0.00 0.00 4.17
165 166 2.158900 CGGATCTGAATGGCTTAGTGGT 60.159 50.000 0.00 0.00 0.00 4.16
166 167 2.103094 TCGGATCTGAATGGCTTAGTGG 59.897 50.000 0.39 0.00 0.00 4.00
167 168 3.459232 TCGGATCTGAATGGCTTAGTG 57.541 47.619 0.39 0.00 0.00 2.74
168 169 4.636249 GATTCGGATCTGAATGGCTTAGT 58.364 43.478 30.16 8.35 38.65 2.24
169 170 3.677121 CGATTCGGATCTGAATGGCTTAG 59.323 47.826 30.16 12.64 38.65 2.18
170 171 3.653344 CGATTCGGATCTGAATGGCTTA 58.347 45.455 30.16 3.41 38.65 3.09
171 172 2.487934 CGATTCGGATCTGAATGGCTT 58.512 47.619 30.16 10.50 38.65 4.35
172 173 2.160822 CGATTCGGATCTGAATGGCT 57.839 50.000 30.16 10.87 38.65 4.75
185 186 2.003672 CGTTAGTTGCCCCGATTCG 58.996 57.895 0.00 0.00 0.00 3.34
186 187 1.719709 GCGTTAGTTGCCCCGATTC 59.280 57.895 0.00 0.00 0.00 2.52
187 188 2.104253 CGCGTTAGTTGCCCCGATT 61.104 57.895 0.00 0.00 0.00 3.34
188 189 2.510691 CGCGTTAGTTGCCCCGAT 60.511 61.111 0.00 0.00 0.00 4.18
189 190 4.745751 CCGCGTTAGTTGCCCCGA 62.746 66.667 4.92 0.00 0.00 5.14
191 192 4.710167 ACCCGCGTTAGTTGCCCC 62.710 66.667 4.92 0.00 0.00 5.80
192 193 3.428282 CACCCGCGTTAGTTGCCC 61.428 66.667 4.92 0.00 0.00 5.36
193 194 1.962306 TTCACCCGCGTTAGTTGCC 60.962 57.895 4.92 0.00 0.00 4.52
194 195 1.205820 GTTCACCCGCGTTAGTTGC 59.794 57.895 4.92 0.00 0.00 4.17
195 196 0.881159 TGGTTCACCCGCGTTAGTTG 60.881 55.000 4.92 0.00 35.15 3.16
196 197 0.035739 ATGGTTCACCCGCGTTAGTT 59.964 50.000 4.92 0.00 35.15 2.24
197 198 0.672401 CATGGTTCACCCGCGTTAGT 60.672 55.000 4.92 0.00 35.15 2.24
198 199 1.366111 CCATGGTTCACCCGCGTTAG 61.366 60.000 4.92 0.00 35.15 2.34
199 200 1.376166 CCATGGTTCACCCGCGTTA 60.376 57.895 4.92 0.00 35.15 3.18
200 201 2.671619 CCATGGTTCACCCGCGTT 60.672 61.111 4.92 0.00 35.15 4.84
201 202 3.632080 TCCATGGTTCACCCGCGT 61.632 61.111 12.58 0.00 35.15 6.01
202 203 3.124921 GTCCATGGTTCACCCGCG 61.125 66.667 12.58 0.00 35.15 6.46
203 204 3.124921 CGTCCATGGTTCACCCGC 61.125 66.667 12.58 0.00 35.15 6.13
204 205 1.740296 GACGTCCATGGTTCACCCG 60.740 63.158 12.58 8.17 35.15 5.28
205 206 0.953960 GTGACGTCCATGGTTCACCC 60.954 60.000 22.84 8.30 34.29 4.61
206 207 0.034896 AGTGACGTCCATGGTTCACC 59.965 55.000 26.56 16.05 0.00 4.02
207 208 1.148310 CAGTGACGTCCATGGTTCAC 58.852 55.000 24.57 24.57 0.00 3.18
208 209 0.034756 CCAGTGACGTCCATGGTTCA 59.965 55.000 21.99 10.26 0.00 3.18
209 210 0.320374 TCCAGTGACGTCCATGGTTC 59.680 55.000 26.46 7.67 34.32 3.62
210 211 0.321671 CTCCAGTGACGTCCATGGTT 59.678 55.000 26.46 0.00 34.32 3.67
211 212 0.832135 ACTCCAGTGACGTCCATGGT 60.832 55.000 26.46 12.56 34.32 3.55
212 213 0.321671 AACTCCAGTGACGTCCATGG 59.678 55.000 23.53 23.53 0.00 3.66
213 214 1.432514 CAACTCCAGTGACGTCCATG 58.567 55.000 14.12 11.43 0.00 3.66
214 215 0.320771 GCAACTCCAGTGACGTCCAT 60.321 55.000 14.12 0.00 0.00 3.41
215 216 1.069090 GCAACTCCAGTGACGTCCA 59.931 57.895 14.12 0.00 0.00 4.02
216 217 2.022129 CGCAACTCCAGTGACGTCC 61.022 63.158 14.12 4.42 0.00 4.79
217 218 2.022129 CCGCAACTCCAGTGACGTC 61.022 63.158 9.11 9.11 0.00 4.34
218 219 2.029073 CCGCAACTCCAGTGACGT 59.971 61.111 0.00 0.00 0.00 4.34
219 220 1.594293 AACCGCAACTCCAGTGACG 60.594 57.895 0.00 0.00 0.00 4.35
220 221 1.941812 CAACCGCAACTCCAGTGAC 59.058 57.895 0.00 0.00 0.00 3.67
221 222 1.891919 GCAACCGCAACTCCAGTGA 60.892 57.895 0.00 0.00 38.36 3.41
222 223 2.639286 GCAACCGCAACTCCAGTG 59.361 61.111 0.00 0.00 38.36 3.66
223 224 2.594592 GGCAACCGCAACTCCAGT 60.595 61.111 0.00 0.00 41.24 4.00
235 236 3.134127 GGTCTGATGGCGGGCAAC 61.134 66.667 8.78 6.60 0.00 4.17
236 237 4.424711 GGGTCTGATGGCGGGCAA 62.425 66.667 8.78 0.00 0.00 4.52
239 240 4.530857 GTCGGGTCTGATGGCGGG 62.531 72.222 0.00 0.00 0.00 6.13
240 241 4.530857 GGTCGGGTCTGATGGCGG 62.531 72.222 0.00 0.00 0.00 6.13
241 242 4.873129 CGGTCGGGTCTGATGGCG 62.873 72.222 0.00 0.00 0.00 5.69
243 244 4.530857 GGCGGTCGGGTCTGATGG 62.531 72.222 0.00 0.00 0.00 3.51
244 245 4.873129 CGGCGGTCGGGTCTGATG 62.873 72.222 0.00 0.00 34.75 3.07
270 271 3.503363 GACTGTCCGCTGCCATGC 61.503 66.667 0.00 0.00 0.00 4.06
271 272 3.190849 CGACTGTCCGCTGCCATG 61.191 66.667 1.55 0.00 0.00 3.66
281 282 3.127352 CTAGGAGCCGGCGACTGTC 62.127 68.421 28.70 18.15 0.00 3.51
282 283 3.141488 CTAGGAGCCGGCGACTGT 61.141 66.667 28.70 10.49 0.00 3.55
283 284 2.343163 CTTCTAGGAGCCGGCGACTG 62.343 65.000 28.70 20.06 0.00 3.51
284 285 2.044252 TTCTAGGAGCCGGCGACT 60.044 61.111 25.37 25.37 0.00 4.18
285 286 2.413765 CTTCTAGGAGCCGGCGAC 59.586 66.667 23.20 18.32 0.00 5.19
286 287 3.528370 GCTTCTAGGAGCCGGCGA 61.528 66.667 23.20 9.13 36.66 5.54
292 293 0.107643 GTCCATGGGCTTCTAGGAGC 59.892 60.000 15.30 15.30 41.96 4.70
293 294 0.761802 GGTCCATGGGCTTCTAGGAG 59.238 60.000 17.62 0.00 0.00 3.69
294 295 1.048724 CGGTCCATGGGCTTCTAGGA 61.049 60.000 17.62 0.00 0.00 2.94
295 296 1.447643 CGGTCCATGGGCTTCTAGG 59.552 63.158 17.62 0.00 0.00 3.02
296 297 1.447643 CCGGTCCATGGGCTTCTAG 59.552 63.158 17.62 2.99 0.00 2.43
297 298 2.742116 GCCGGTCCATGGGCTTCTA 61.742 63.158 17.62 0.00 45.93 2.10
298 299 4.115199 GCCGGTCCATGGGCTTCT 62.115 66.667 17.62 0.00 45.93 2.85
335 336 2.186903 CTAGCCACCGCCGAACAT 59.813 61.111 0.00 0.00 34.57 2.71
354 355 1.919918 CAAGCAAGTTGGACGCAAAA 58.080 45.000 4.75 0.00 31.82 2.44
372 373 2.115910 CTCCCCCACAAGCAAGCA 59.884 61.111 0.00 0.00 0.00 3.91
379 380 3.189646 CAACCCCCTCCCCCACAA 61.190 66.667 0.00 0.00 0.00 3.33
407 417 1.673033 CGGTTCACTCACCATCTCCAC 60.673 57.143 0.00 0.00 36.49 4.02
430 440 4.343814 TCAAATGTTCTTTGGTTTCTCCCC 59.656 41.667 0.00 0.00 34.77 4.81
432 442 6.748132 TGATCAAATGTTCTTTGGTTTCTCC 58.252 36.000 0.00 0.00 0.00 3.71
488 499 3.532641 AAGATCTGCCTTCCCAAAAGT 57.467 42.857 0.00 0.00 0.00 2.66
494 505 1.821136 CAACCAAAGATCTGCCTTCCC 59.179 52.381 0.00 0.00 0.00 3.97
498 509 0.613012 GGCCAACCAAAGATCTGCCT 60.613 55.000 10.03 0.00 34.61 4.75
569 580 2.258897 GCTATACGGCGGCTCCTC 59.741 66.667 13.24 0.00 0.00 3.71
643 674 0.109689 CGCTAGCGGTCTATAGCCAC 60.110 60.000 29.29 4.27 41.10 5.01
745 784 2.091333 AGGGAGAAGGAGAGAGATGGTC 60.091 54.545 0.00 0.00 0.00 4.02
746 785 1.936631 AGGGAGAAGGAGAGAGATGGT 59.063 52.381 0.00 0.00 0.00 3.55
760 799 2.363018 CGTGGGCAGAGAGGGAGA 60.363 66.667 0.00 0.00 0.00 3.71
887 938 1.396301 CCTCTTGCTTTCATCTCACGC 59.604 52.381 0.00 0.00 0.00 5.34
944 995 4.352009 TGCCTCTCTCAATCTCTCTCTTT 58.648 43.478 0.00 0.00 0.00 2.52
955 1006 1.184431 CTGCTCTCTGCCTCTCTCAA 58.816 55.000 0.00 0.00 42.00 3.02
956 1007 0.039472 ACTGCTCTCTGCCTCTCTCA 59.961 55.000 0.00 0.00 42.00 3.27
962 1013 1.181741 TGACGAACTGCTCTCTGCCT 61.182 55.000 0.00 0.00 42.00 4.75
968 1032 0.669077 ACGAACTGACGAACTGCTCT 59.331 50.000 0.00 0.00 37.03 4.09
969 1033 1.053811 GACGAACTGACGAACTGCTC 58.946 55.000 0.00 0.00 37.03 4.26
982 1046 2.845861 ATGGCGACGAGACGACGAAC 62.846 60.000 17.69 10.74 46.01 3.95
983 1047 2.683859 ATGGCGACGAGACGACGAA 61.684 57.895 17.69 7.11 46.01 3.85
985 1049 2.844224 TTCATGGCGACGAGACGACG 62.844 60.000 0.00 10.84 45.00 5.12
986 1050 1.134530 CTTCATGGCGACGAGACGAC 61.135 60.000 0.00 0.00 42.12 4.34
987 1051 1.136774 CTTCATGGCGACGAGACGA 59.863 57.895 0.00 0.00 35.09 4.20
988 1052 0.732880 AACTTCATGGCGACGAGACG 60.733 55.000 0.00 0.00 0.00 4.18
989 1053 0.992802 GAACTTCATGGCGACGAGAC 59.007 55.000 0.00 0.00 0.00 3.36
990 1054 0.601057 TGAACTTCATGGCGACGAGA 59.399 50.000 0.00 0.00 0.00 4.04
991 1055 1.645034 ATGAACTTCATGGCGACGAG 58.355 50.000 3.32 0.00 35.43 4.18
1111 1180 1.546476 CAGGTAAGAAGACGCAGGACT 59.454 52.381 0.00 0.00 0.00 3.85
1113 1182 0.246635 GCAGGTAAGAAGACGCAGGA 59.753 55.000 0.00 0.00 0.00 3.86
1114 1183 0.247736 AGCAGGTAAGAAGACGCAGG 59.752 55.000 0.00 0.00 0.00 4.85
1115 1184 1.337260 ACAGCAGGTAAGAAGACGCAG 60.337 52.381 0.00 0.00 0.00 5.18
1116 1185 0.679505 ACAGCAGGTAAGAAGACGCA 59.320 50.000 0.00 0.00 0.00 5.24
1117 1186 1.071605 CACAGCAGGTAAGAAGACGC 58.928 55.000 0.00 0.00 0.00 5.19
1118 1187 1.071605 GCACAGCAGGTAAGAAGACG 58.928 55.000 0.00 0.00 0.00 4.18
1119 1188 2.072298 CAGCACAGCAGGTAAGAAGAC 58.928 52.381 0.00 0.00 0.00 3.01
1120 1189 1.694150 ACAGCACAGCAGGTAAGAAGA 59.306 47.619 0.00 0.00 0.00 2.87
1126 1195 0.686789 ATCACACAGCACAGCAGGTA 59.313 50.000 0.00 0.00 0.00 3.08
1149 1228 2.161410 TGCATCAAACGGTACATTCTGC 59.839 45.455 0.00 0.73 0.00 4.26
1158 1237 1.068610 CGAACCAATGCATCAAACGGT 60.069 47.619 0.00 0.00 0.00 4.83
1164 1259 1.463056 GAACGACGAACCAATGCATCA 59.537 47.619 0.00 0.00 0.00 3.07
1173 1268 0.857287 GAACACTGGAACGACGAACC 59.143 55.000 0.00 4.95 0.00 3.62
1175 1270 2.198406 CAAGAACACTGGAACGACGAA 58.802 47.619 0.00 0.00 0.00 3.85
1177 1272 0.859232 CCAAGAACACTGGAACGACG 59.141 55.000 0.00 0.00 0.00 5.12
1179 1274 2.702592 AACCAAGAACACTGGAACGA 57.297 45.000 0.00 0.00 0.00 3.85
1180 1275 2.032924 GGAAACCAAGAACACTGGAACG 59.967 50.000 0.00 0.00 0.00 3.95
1212 1307 6.017440 CGAAAGACCAACCAAGAACAAATCTA 60.017 38.462 0.00 0.00 37.42 1.98
1213 1308 5.221048 CGAAAGACCAACCAAGAACAAATCT 60.221 40.000 0.00 0.00 41.32 2.40
1221 1316 2.370519 TGGATCGAAAGACCAACCAAGA 59.629 45.455 0.00 0.00 46.97 3.02
1224 1319 2.039746 ACATGGATCGAAAGACCAACCA 59.960 45.455 0.00 0.00 46.97 3.67
1227 1326 2.304470 TGGACATGGATCGAAAGACCAA 59.696 45.455 0.00 0.00 46.97 3.67
1241 1340 7.551974 AGAGAACTAATTTGACAGATGGACATG 59.448 37.037 0.00 0.00 0.00 3.21
1252 1351 8.594881 TGTTTCAGAGAGAGAACTAATTTGAC 57.405 34.615 0.00 0.00 0.00 3.18
1258 1357 8.234136 TGTACTTGTTTCAGAGAGAGAACTAA 57.766 34.615 0.00 0.00 0.00 2.24
1261 1360 7.772332 TTTGTACTTGTTTCAGAGAGAGAAC 57.228 36.000 0.00 0.00 0.00 3.01
1264 1363 7.539712 TGTTTTGTACTTGTTTCAGAGAGAG 57.460 36.000 0.00 0.00 0.00 3.20
1267 1366 7.441890 TGTTGTTTTGTACTTGTTTCAGAGA 57.558 32.000 0.00 0.00 0.00 3.10
1279 1378 6.401955 AAACACTGCATTGTTGTTTTGTAC 57.598 33.333 21.48 0.00 39.70 2.90
1317 1416 8.974060 ATTTGTAGTACTTGTGAAGAAAAGGA 57.026 30.769 0.00 0.00 0.00 3.36
1327 1429 8.294341 TCGAGAAAAGATTTGTAGTACTTGTG 57.706 34.615 0.00 0.00 0.00 3.33
1331 1433 9.790389 CATACTCGAGAAAAGATTTGTAGTACT 57.210 33.333 21.68 0.00 0.00 2.73
1334 1436 7.097192 TGCATACTCGAGAAAAGATTTGTAGT 58.903 34.615 21.68 0.00 0.00 2.73
1335 1437 7.525688 TGCATACTCGAGAAAAGATTTGTAG 57.474 36.000 21.68 0.00 0.00 2.74
1336 1438 8.492673 AATGCATACTCGAGAAAAGATTTGTA 57.507 30.769 21.68 0.81 0.00 2.41
1337 1439 6.992063 ATGCATACTCGAGAAAAGATTTGT 57.008 33.333 21.68 0.00 0.00 2.83
1390 1492 5.942325 GTGTAACGCAAACACAAGAAAAT 57.058 34.783 9.81 0.00 45.26 1.82
1412 1514 5.531122 TCATCAGGGGTAGAAAATACTCG 57.469 43.478 0.00 0.00 0.00 4.18
1446 1548 2.124403 ATAGCAGCAGCCCACAGC 60.124 61.111 0.00 0.00 43.56 4.40
1449 1551 1.146930 TAGCATAGCAGCAGCCCAC 59.853 57.895 0.00 0.00 43.56 4.61
1520 1656 1.581447 CCAGCTTTTTCGCCTCACC 59.419 57.895 0.00 0.00 0.00 4.02
1525 1661 3.631487 ATGCGCCAGCTTTTTCGCC 62.631 57.895 4.18 0.88 46.14 5.54
1527 1663 1.514873 GGATGCGCCAGCTTTTTCG 60.515 57.895 4.18 0.00 45.42 3.46
1540 1680 4.147449 GCCAAAAGGCGGGGATGC 62.147 66.667 0.00 0.00 0.00 3.91
1542 1682 2.362889 CAGCCAAAAGGCGGGGAT 60.363 61.111 0.19 0.00 40.23 3.85
1548 1688 2.307934 TGTTTGAACAGCCAAAAGGC 57.692 45.000 0.00 0.00 37.72 4.35
1560 1700 1.686355 ACGACCATGGCTTGTTTGAA 58.314 45.000 13.04 0.00 0.00 2.69
1589 1732 9.956640 ACAGAAAAGAATCCTATGATCCATATC 57.043 33.333 0.00 0.00 0.00 1.63
1625 1768 7.355332 TCGCAACTTTACAGGTAAAATACTC 57.645 36.000 6.14 0.00 34.95 2.59
1651 1820 1.274596 CAAGCAGCATTTTGATCGGC 58.725 50.000 0.00 0.00 0.00 5.54
1652 1821 2.642139 ACAAGCAGCATTTTGATCGG 57.358 45.000 0.00 0.00 0.00 4.18
1728 1909 6.518208 TCCAACGGGAACTAAAAATAATGG 57.482 37.500 0.00 0.00 41.32 3.16
1739 1920 0.175073 GATACGCTCCAACGGGAACT 59.825 55.000 0.00 0.00 44.38 3.01
1741 1922 0.174845 CAGATACGCTCCAACGGGAA 59.825 55.000 0.00 0.00 44.38 3.97
1744 1925 1.836383 GTACAGATACGCTCCAACGG 58.164 55.000 0.00 0.00 37.37 4.44
1826 2011 9.657419 AATTGATTGATTTACCAAACATTCTCC 57.343 29.630 0.00 0.00 30.71 3.71
1851 2040 6.418057 ACATAGACAGCATTTTCCCAAAAA 57.582 33.333 0.00 0.00 38.66 1.94
2004 2194 9.011407 GTTCAGAGTTACTACATAATCGTTGAG 57.989 37.037 0.00 0.00 0.00 3.02
2013 2203 8.851145 GGATGATCTGTTCAGAGTTACTACATA 58.149 37.037 8.47 0.00 37.89 2.29
2014 2204 7.563188 AGGATGATCTGTTCAGAGTTACTACAT 59.437 37.037 8.47 0.00 37.89 2.29
2015 2205 6.892456 AGGATGATCTGTTCAGAGTTACTACA 59.108 38.462 8.47 0.00 37.89 2.74
2016 2206 7.341445 AGGATGATCTGTTCAGAGTTACTAC 57.659 40.000 8.47 0.00 37.89 2.73
2017 2207 6.261158 CGAGGATGATCTGTTCAGAGTTACTA 59.739 42.308 8.47 0.00 37.89 1.82
2018 2208 5.067153 CGAGGATGATCTGTTCAGAGTTACT 59.933 44.000 8.47 2.21 37.89 2.24
2025 2217 1.485397 CGCGAGGATGATCTGTTCAG 58.515 55.000 0.00 0.00 37.89 3.02
2042 2234 2.517450 GGACAGCACGTATCTGCGC 61.517 63.158 14.63 0.00 42.42 6.09
2111 2303 9.520515 AGATGAATTGATTAAGTTACCTTGTGT 57.479 29.630 0.00 0.00 31.89 3.72
2140 2337 8.040727 AGCAGGAATAATTTCAATGGGTAAAAC 58.959 33.333 0.00 0.00 33.23 2.43
2157 2354 6.352479 CCATGGCTTCAGATATAGCAGGAATA 60.352 42.308 0.00 0.00 39.15 1.75
2161 2358 3.008813 ACCATGGCTTCAGATATAGCAGG 59.991 47.826 13.04 0.00 39.15 4.85
2176 2373 1.142465 AGACCATCATCTGACCATGGC 59.858 52.381 13.04 5.35 40.85 4.40
2177 2374 3.211865 CAAGACCATCATCTGACCATGG 58.788 50.000 11.19 11.19 42.59 3.66
2178 2375 3.211865 CCAAGACCATCATCTGACCATG 58.788 50.000 0.00 0.00 0.00 3.66
2179 2376 2.174210 CCCAAGACCATCATCTGACCAT 59.826 50.000 0.00 0.00 0.00 3.55
2182 2379 1.211457 AGCCCAAGACCATCATCTGAC 59.789 52.381 0.00 0.00 0.00 3.51
2183 2380 1.487976 GAGCCCAAGACCATCATCTGA 59.512 52.381 0.00 0.00 0.00 3.27
2184 2381 1.476471 GGAGCCCAAGACCATCATCTG 60.476 57.143 0.00 0.00 0.00 2.90
2185 2382 0.842635 GGAGCCCAAGACCATCATCT 59.157 55.000 0.00 0.00 0.00 2.90
2186 2383 0.548031 TGGAGCCCAAGACCATCATC 59.452 55.000 0.00 0.00 0.00 2.92
2187 2384 0.549950 CTGGAGCCCAAGACCATCAT 59.450 55.000 0.00 0.00 30.80 2.45
2188 2385 0.842030 ACTGGAGCCCAAGACCATCA 60.842 55.000 0.00 0.00 30.80 3.07
2189 2386 0.329596 AACTGGAGCCCAAGACCATC 59.670 55.000 0.00 0.00 30.80 3.51
2190 2387 1.561542 CTAACTGGAGCCCAAGACCAT 59.438 52.381 0.00 0.00 30.80 3.55
2191 2388 0.984230 CTAACTGGAGCCCAAGACCA 59.016 55.000 0.00 0.00 30.80 4.02
2192 2389 1.276622 TCTAACTGGAGCCCAAGACC 58.723 55.000 0.00 0.00 30.80 3.85
2193 2390 2.303311 ACTTCTAACTGGAGCCCAAGAC 59.697 50.000 0.00 0.00 30.80 3.01
2194 2391 2.621070 ACTTCTAACTGGAGCCCAAGA 58.379 47.619 0.00 0.00 30.80 3.02
2195 2392 3.425162 AACTTCTAACTGGAGCCCAAG 57.575 47.619 0.00 0.00 30.80 3.61
2196 2393 4.164981 TCTAACTTCTAACTGGAGCCCAA 58.835 43.478 0.00 0.00 30.80 4.12
2197 2394 3.786553 TCTAACTTCTAACTGGAGCCCA 58.213 45.455 0.00 0.00 0.00 5.36
2198 2395 4.020485 TGTTCTAACTTCTAACTGGAGCCC 60.020 45.833 0.00 0.00 0.00 5.19
2199 2396 5.047235 TCTGTTCTAACTTCTAACTGGAGCC 60.047 44.000 0.00 0.00 0.00 4.70
2204 2401 7.171508 TGCATTGTCTGTTCTAACTTCTAACTG 59.828 37.037 0.00 0.00 0.00 3.16
2280 2486 1.396301 CAGAGCTTGACCGAAAGATGC 59.604 52.381 0.00 0.00 0.00 3.91
2369 2575 5.505654 GCATATACAAACTCGTGGAAATGGG 60.506 44.000 0.00 0.00 0.00 4.00
2418 2624 3.545481 CGAGGCGCTACGTGCAAG 61.545 66.667 7.64 0.00 41.25 4.01
2589 2811 3.253188 ACGCACACATCAAAATTACAGCT 59.747 39.130 0.00 0.00 0.00 4.24
2660 2882 3.842923 CGCCTCCACGATCAGCCT 61.843 66.667 0.00 0.00 34.06 4.58
2853 3075 1.272781 CTCGATCTTGAACACGAGGC 58.727 55.000 0.00 0.00 45.22 4.70
3019 3241 2.985847 GACCACACCAAGCTGCCC 60.986 66.667 0.00 0.00 0.00 5.36
3022 3244 0.249699 TGTACGACCACACCAAGCTG 60.250 55.000 0.00 0.00 0.00 4.24
3026 3248 1.028130 TACGTGTACGACCACACCAA 58.972 50.000 11.79 1.41 44.88 3.67
3037 3259 0.785979 CCTTGCGGTTGTACGTGTAC 59.214 55.000 0.00 3.21 36.63 2.90
3209 3431 1.439228 CGACGACATCAGAGGGCAT 59.561 57.895 0.00 0.00 0.00 4.40
3214 3436 0.101399 CTTCCCCGACGACATCAGAG 59.899 60.000 0.00 0.00 0.00 3.35
3287 3509 3.103911 GTCGTTGTCGTCCGCAGG 61.104 66.667 0.00 0.00 42.66 4.85
3289 3511 3.258070 ATCGTCGTTGTCGTCCGCA 62.258 57.895 0.00 0.00 38.33 5.69
3290 3512 2.503375 ATCGTCGTTGTCGTCCGC 60.503 61.111 0.00 0.00 38.33 5.54
3294 3516 1.733041 CAGGCATCGTCGTTGTCGT 60.733 57.895 5.28 0.00 38.33 4.34
3295 3517 3.071459 GCAGGCATCGTCGTTGTCG 62.071 63.158 5.28 1.38 38.55 4.35
3317 3539 0.976641 ATGGTCTCGAGCACTTCCAA 59.023 50.000 7.81 0.00 42.02 3.53
3641 3863 1.122019 AGCAAGGAAGGGTCGTCTGT 61.122 55.000 0.00 0.00 0.00 3.41
4110 4347 4.329545 TCCAGTTCCAGGTGCGCC 62.330 66.667 8.71 8.71 0.00 6.53
4553 4793 0.108615 CTCTGTACAGCCAACCTCCG 60.109 60.000 18.45 0.00 0.00 4.63
4642 4902 5.520376 AAAACAGACCCTGAATTGAAGTG 57.480 39.130 0.45 0.00 35.18 3.16
4665 4925 6.569780 TCGGATCAATACATTTCTCGAGAAA 58.430 36.000 35.54 35.54 46.60 2.52
4670 4930 5.557136 GCACTTCGGATCAATACATTTCTCG 60.557 44.000 0.00 0.00 0.00 4.04
4756 5016 7.121974 TGCGATAAGACAGAAAAAGAAAGAG 57.878 36.000 0.00 0.00 0.00 2.85
4775 5035 2.094752 GCACAACCATACCTTTTGCGAT 60.095 45.455 0.00 0.00 0.00 4.58
4797 5060 2.750237 AAATTCCAGGACGCCGCC 60.750 61.111 0.00 0.00 0.00 6.13
4802 5065 3.786635 CTGGTCTAGAAATTCCAGGACG 58.213 50.000 16.07 0.00 42.38 4.79
4820 5083 0.530650 CGGCTAGCCACATGTACTGG 60.531 60.000 32.47 9.02 35.37 4.00
4835 5098 1.271840 TTTCCACCATCCTAGCGGCT 61.272 55.000 7.98 7.98 0.00 5.52
4836 5099 0.393808 TTTTCCACCATCCTAGCGGC 60.394 55.000 0.00 0.00 0.00 6.53
4837 5100 1.949525 CATTTTCCACCATCCTAGCGG 59.050 52.381 0.00 0.00 0.00 5.52
4838 5101 1.949525 CCATTTTCCACCATCCTAGCG 59.050 52.381 0.00 0.00 0.00 4.26
4842 5105 2.807676 GTCACCATTTTCCACCATCCT 58.192 47.619 0.00 0.00 0.00 3.24
4847 5110 3.934457 AAATCGTCACCATTTTCCACC 57.066 42.857 0.00 0.00 0.00 4.61
4855 5118 7.106239 AGTCTTTCATCTAAAATCGTCACCAT 58.894 34.615 0.00 0.00 0.00 3.55
4895 5158 9.632807 CCGGTTGATGACTTTATTAATTCAAAA 57.367 29.630 0.00 0.00 0.00 2.44
4906 5169 1.349688 ACTGGCCGGTTGATGACTTTA 59.650 47.619 12.85 0.00 0.00 1.85
4910 5173 0.889186 AACACTGGCCGGTTGATGAC 60.889 55.000 16.73 0.00 0.00 3.06
4914 5177 0.398696 ATGTAACACTGGCCGGTTGA 59.601 50.000 16.73 0.00 0.00 3.18
4915 5178 2.006888 CTATGTAACACTGGCCGGTTG 58.993 52.381 16.73 13.36 0.00 3.77
4917 5180 0.539986 CCTATGTAACACTGGCCGGT 59.460 55.000 12.85 12.85 0.00 5.28
4918 5181 0.179056 CCCTATGTAACACTGGCCGG 60.179 60.000 11.02 11.02 0.00 6.13
4920 5183 0.254747 TGCCCTATGTAACACTGGCC 59.745 55.000 0.00 0.00 38.10 5.36
4921 5184 1.743394 GTTGCCCTATGTAACACTGGC 59.257 52.381 0.00 0.00 39.16 4.85
4922 5185 2.290641 TGGTTGCCCTATGTAACACTGG 60.291 50.000 0.00 0.00 40.91 4.00
4925 5188 6.071840 TGTTTTATGGTTGCCCTATGTAACAC 60.072 38.462 0.00 0.00 40.91 3.32
4926 5189 6.010850 TGTTTTATGGTTGCCCTATGTAACA 58.989 36.000 0.00 0.00 40.91 2.41
4927 5190 6.152154 ACTGTTTTATGGTTGCCCTATGTAAC 59.848 38.462 0.00 0.00 38.68 2.50
4935 5198 2.095415 GTCGACTGTTTTATGGTTGCCC 60.095 50.000 8.70 0.00 0.00 5.36
4936 5199 2.095415 GGTCGACTGTTTTATGGTTGCC 60.095 50.000 16.46 0.00 0.00 4.52
4939 5202 3.389925 TCGGTCGACTGTTTTATGGTT 57.610 42.857 23.27 0.00 0.00 3.67
4941 5204 2.091588 CGTTCGGTCGACTGTTTTATGG 59.908 50.000 23.27 4.48 0.00 2.74
4945 5208 2.144482 ATCGTTCGGTCGACTGTTTT 57.856 45.000 23.27 3.63 42.56 2.43
4961 5225 5.064441 TGCTCTATCATGTCCATGTATCG 57.936 43.478 7.13 0.00 39.72 2.92
4964 5228 5.876651 AGTTGCTCTATCATGTCCATGTA 57.123 39.130 7.13 0.00 39.72 2.29
4972 5236 6.367686 TGCATTGTAAGTTGCTCTATCATG 57.632 37.500 0.00 0.00 39.60 3.07
4973 5237 6.375174 TGTTGCATTGTAAGTTGCTCTATCAT 59.625 34.615 0.00 0.00 39.60 2.45
4974 5238 5.704978 TGTTGCATTGTAAGTTGCTCTATCA 59.295 36.000 0.00 0.00 39.60 2.15
4984 5248 6.384258 TGTTATGTGTGTTGCATTGTAAGT 57.616 33.333 0.00 0.00 0.00 2.24
4986 5250 5.689514 GCTTGTTATGTGTGTTGCATTGTAA 59.310 36.000 0.00 0.00 0.00 2.41
4990 5254 4.589216 AGCTTGTTATGTGTGTTGCATT 57.411 36.364 0.00 0.00 0.00 3.56
4994 5258 6.494842 ACACTTTAGCTTGTTATGTGTGTTG 58.505 36.000 0.00 0.00 36.10 3.33
5003 5267 9.944376 AATCATTCTCTACACTTTAGCTTGTTA 57.056 29.630 0.00 0.00 0.00 2.41
5063 5327 7.093024 GCACCCCTTGTACCTATATATATGTGT 60.093 40.741 5.44 5.10 0.00 3.72
5349 5617 0.171231 CGAGCTCGACATCCACTTCA 59.829 55.000 32.06 0.00 43.02 3.02



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.