Multiple sequence alignment - TraesCS7D01G150700
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G150700 | chr7D | 100.000 | 5528 | 0 | 0 | 1 | 5528 | 99956864 | 99951337 | 0.000000e+00 | 10209.0 |
1 | TraesCS7D01G150700 | chr7D | 98.051 | 513 | 9 | 1 | 5017 | 5528 | 118589184 | 118589696 | 0.000000e+00 | 891.0 |
2 | TraesCS7D01G150700 | chr7D | 97.856 | 513 | 10 | 1 | 5017 | 5528 | 295300178 | 295299666 | 0.000000e+00 | 885.0 |
3 | TraesCS7D01G150700 | chr7A | 87.965 | 4678 | 286 | 127 | 312 | 4831 | 102336529 | 102331971 | 0.000000e+00 | 5264.0 |
4 | TraesCS7D01G150700 | chr7B | 92.419 | 3100 | 164 | 39 | 1946 | 5016 | 55343229 | 55340172 | 0.000000e+00 | 4357.0 |
5 | TraesCS7D01G150700 | chr7B | 86.068 | 1170 | 91 | 45 | 314 | 1438 | 55344889 | 55343747 | 0.000000e+00 | 1192.0 |
6 | TraesCS7D01G150700 | chr7B | 85.595 | 479 | 43 | 14 | 1443 | 1895 | 55343709 | 55343231 | 3.870000e-131 | 479.0 |
7 | TraesCS7D01G150700 | chr7B | 89.796 | 49 | 3 | 2 | 4896 | 4944 | 70821845 | 70821799 | 1.660000e-05 | 62.1 |
8 | TraesCS7D01G150700 | chr2D | 98.438 | 512 | 8 | 0 | 5017 | 5528 | 109709112 | 109709623 | 0.000000e+00 | 902.0 |
9 | TraesCS7D01G150700 | chr2D | 98.438 | 512 | 8 | 0 | 5017 | 5528 | 631902329 | 631901818 | 0.000000e+00 | 902.0 |
10 | TraesCS7D01G150700 | chr2D | 94.595 | 37 | 2 | 0 | 4897 | 4933 | 75387961 | 75387925 | 2.150000e-04 | 58.4 |
11 | TraesCS7D01G150700 | chr5D | 98.054 | 514 | 9 | 1 | 5016 | 5528 | 390634058 | 390633545 | 0.000000e+00 | 893.0 |
12 | TraesCS7D01G150700 | chr5D | 98.051 | 513 | 9 | 1 | 5017 | 5528 | 438392208 | 438392720 | 0.000000e+00 | 891.0 |
13 | TraesCS7D01G150700 | chr5D | 75.088 | 285 | 55 | 14 | 2718 | 2995 | 275613826 | 275613551 | 9.730000e-23 | 119.0 |
14 | TraesCS7D01G150700 | chr5D | 86.364 | 88 | 10 | 2 | 3962 | 4048 | 476462586 | 476462672 | 1.640000e-15 | 95.3 |
15 | TraesCS7D01G150700 | chr5D | 82.524 | 103 | 16 | 2 | 3947 | 4048 | 232618952 | 232618851 | 7.630000e-14 | 89.8 |
16 | TraesCS7D01G150700 | chr6D | 97.860 | 514 | 11 | 0 | 5015 | 5528 | 466258306 | 466258819 | 0.000000e+00 | 889.0 |
17 | TraesCS7D01G150700 | chr3D | 97.860 | 514 | 9 | 1 | 5017 | 5528 | 250901434 | 250901947 | 0.000000e+00 | 887.0 |
18 | TraesCS7D01G150700 | chr3D | 86.239 | 109 | 13 | 2 | 3947 | 4054 | 427816842 | 427816735 | 3.500000e-22 | 117.0 |
19 | TraesCS7D01G150700 | chr1D | 97.670 | 515 | 11 | 1 | 5015 | 5528 | 79156800 | 79157314 | 0.000000e+00 | 883.0 |
20 | TraesCS7D01G150700 | chr3B | 86.239 | 109 | 13 | 2 | 3947 | 4054 | 559341275 | 559341168 | 3.500000e-22 | 117.0 |
21 | TraesCS7D01G150700 | chr3A | 87.379 | 103 | 11 | 2 | 3947 | 4048 | 557949812 | 557949913 | 3.500000e-22 | 117.0 |
22 | TraesCS7D01G150700 | chr3A | 100.000 | 30 | 0 | 0 | 4897 | 4926 | 545158762 | 545158733 | 7.740000e-04 | 56.5 |
23 | TraesCS7D01G150700 | chr2A | 85.217 | 115 | 14 | 3 | 3947 | 4060 | 746852126 | 746852014 | 1.260000e-21 | 115.0 |
24 | TraesCS7D01G150700 | chr5A | 74.552 | 279 | 60 | 9 | 2721 | 2995 | 364421224 | 364420953 | 1.630000e-20 | 111.0 |
25 | TraesCS7D01G150700 | chr5A | 83.495 | 103 | 15 | 2 | 3947 | 4048 | 322615366 | 322615467 | 1.640000e-15 | 95.3 |
26 | TraesCS7D01G150700 | chr5B | 73.427 | 286 | 58 | 16 | 2718 | 2995 | 312910842 | 312910567 | 2.120000e-14 | 91.6 |
27 | TraesCS7D01G150700 | chr1A | 100.000 | 30 | 0 | 0 | 4897 | 4926 | 465433586 | 465433557 | 7.740000e-04 | 56.5 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G150700 | chr7D | 99951337 | 99956864 | 5527 | True | 10209.000000 | 10209 | 100.000000 | 1 | 5528 | 1 | chr7D.!!$R1 | 5527 |
1 | TraesCS7D01G150700 | chr7D | 118589184 | 118589696 | 512 | False | 891.000000 | 891 | 98.051000 | 5017 | 5528 | 1 | chr7D.!!$F1 | 511 |
2 | TraesCS7D01G150700 | chr7D | 295299666 | 295300178 | 512 | True | 885.000000 | 885 | 97.856000 | 5017 | 5528 | 1 | chr7D.!!$R2 | 511 |
3 | TraesCS7D01G150700 | chr7A | 102331971 | 102336529 | 4558 | True | 5264.000000 | 5264 | 87.965000 | 312 | 4831 | 1 | chr7A.!!$R1 | 4519 |
4 | TraesCS7D01G150700 | chr7B | 55340172 | 55344889 | 4717 | True | 2009.333333 | 4357 | 88.027333 | 314 | 5016 | 3 | chr7B.!!$R2 | 4702 |
5 | TraesCS7D01G150700 | chr2D | 109709112 | 109709623 | 511 | False | 902.000000 | 902 | 98.438000 | 5017 | 5528 | 1 | chr2D.!!$F1 | 511 |
6 | TraesCS7D01G150700 | chr2D | 631901818 | 631902329 | 511 | True | 902.000000 | 902 | 98.438000 | 5017 | 5528 | 1 | chr2D.!!$R2 | 511 |
7 | TraesCS7D01G150700 | chr5D | 390633545 | 390634058 | 513 | True | 893.000000 | 893 | 98.054000 | 5016 | 5528 | 1 | chr5D.!!$R3 | 512 |
8 | TraesCS7D01G150700 | chr5D | 438392208 | 438392720 | 512 | False | 891.000000 | 891 | 98.051000 | 5017 | 5528 | 1 | chr5D.!!$F1 | 511 |
9 | TraesCS7D01G150700 | chr6D | 466258306 | 466258819 | 513 | False | 889.000000 | 889 | 97.860000 | 5015 | 5528 | 1 | chr6D.!!$F1 | 513 |
10 | TraesCS7D01G150700 | chr3D | 250901434 | 250901947 | 513 | False | 887.000000 | 887 | 97.860000 | 5017 | 5528 | 1 | chr3D.!!$F1 | 511 |
11 | TraesCS7D01G150700 | chr1D | 79156800 | 79157314 | 514 | False | 883.000000 | 883 | 97.670000 | 5015 | 5528 | 1 | chr1D.!!$F1 | 513 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
773 | 816 | 0.032615 | TCTCCTTCTCCCTCTCTGCC | 60.033 | 60.0 | 0.00 | 0.0 | 0.00 | 4.85 | F |
983 | 1047 | 0.038709 | GCAGAGAGCAGTTCGTCAGT | 60.039 | 55.0 | 0.00 | 0.0 | 44.79 | 3.41 | F |
994 | 1058 | 0.110956 | TTCGTCAGTTCGTCGTCTCG | 60.111 | 55.0 | 0.00 | 0.0 | 0.00 | 4.04 | F |
1379 | 1481 | 0.112412 | TTCTTGGTCTTTCTGCCCCC | 59.888 | 55.0 | 0.00 | 0.0 | 0.00 | 5.40 | F |
1525 | 1661 | 0.321564 | TGAGGCATTTGACCGGTGAG | 60.322 | 55.0 | 14.63 | 0.0 | 0.00 | 3.51 | F |
2589 | 2811 | 0.825425 | TTCCGCTGGTTTCAATGGCA | 60.825 | 50.0 | 0.00 | 0.0 | 0.00 | 4.92 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1741 | 1922 | 0.174845 | CAGATACGCTCCAACGGGAA | 59.825 | 55.0 | 0.00 | 0.0 | 44.38 | 3.97 | R |
2189 | 2386 | 0.329596 | AACTGGAGCCCAAGACCATC | 59.670 | 55.0 | 0.00 | 0.0 | 30.80 | 3.51 | R |
2191 | 2388 | 0.984230 | CTAACTGGAGCCCAAGACCA | 59.016 | 55.0 | 0.00 | 0.0 | 30.80 | 4.02 | R |
3214 | 3436 | 0.101399 | CTTCCCCGACGACATCAGAG | 59.899 | 60.0 | 0.00 | 0.0 | 0.00 | 3.35 | R |
3317 | 3539 | 0.976641 | ATGGTCTCGAGCACTTCCAA | 59.023 | 50.0 | 7.81 | 0.0 | 42.02 | 3.53 | R |
4553 | 4793 | 0.108615 | CTCTGTACAGCCAACCTCCG | 60.109 | 60.0 | 18.45 | 0.0 | 0.00 | 4.63 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
22 | 23 | 5.396750 | GCTTGATCCGTAGTTTTCATCTC | 57.603 | 43.478 | 0.00 | 0.00 | 0.00 | 2.75 |
23 | 24 | 4.870426 | GCTTGATCCGTAGTTTTCATCTCA | 59.130 | 41.667 | 0.00 | 0.00 | 0.00 | 3.27 |
24 | 25 | 5.220491 | GCTTGATCCGTAGTTTTCATCTCAC | 60.220 | 44.000 | 0.00 | 0.00 | 0.00 | 3.51 |
25 | 26 | 4.755411 | TGATCCGTAGTTTTCATCTCACC | 58.245 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
26 | 27 | 3.226346 | TCCGTAGTTTTCATCTCACCG | 57.774 | 47.619 | 0.00 | 0.00 | 0.00 | 4.94 |
27 | 28 | 1.659098 | CCGTAGTTTTCATCTCACCGC | 59.341 | 52.381 | 0.00 | 0.00 | 0.00 | 5.68 |
28 | 29 | 1.659098 | CGTAGTTTTCATCTCACCGCC | 59.341 | 52.381 | 0.00 | 0.00 | 0.00 | 6.13 |
29 | 30 | 1.659098 | GTAGTTTTCATCTCACCGCCG | 59.341 | 52.381 | 0.00 | 0.00 | 0.00 | 6.46 |
30 | 31 | 0.320374 | AGTTTTCATCTCACCGCCGA | 59.680 | 50.000 | 0.00 | 0.00 | 0.00 | 5.54 |
31 | 32 | 1.153353 | GTTTTCATCTCACCGCCGAA | 58.847 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
32 | 33 | 1.533731 | GTTTTCATCTCACCGCCGAAA | 59.466 | 47.619 | 0.00 | 0.00 | 0.00 | 3.46 |
33 | 34 | 2.107950 | TTTCATCTCACCGCCGAAAT | 57.892 | 45.000 | 0.00 | 0.00 | 0.00 | 2.17 |
34 | 35 | 2.107950 | TTCATCTCACCGCCGAAATT | 57.892 | 45.000 | 0.00 | 0.00 | 0.00 | 1.82 |
35 | 36 | 1.651987 | TCATCTCACCGCCGAAATTC | 58.348 | 50.000 | 0.00 | 0.00 | 0.00 | 2.17 |
36 | 37 | 0.301687 | CATCTCACCGCCGAAATTCG | 59.698 | 55.000 | 8.62 | 8.62 | 40.07 | 3.34 |
37 | 38 | 1.429148 | ATCTCACCGCCGAAATTCGC | 61.429 | 55.000 | 10.24 | 4.90 | 38.82 | 4.70 |
38 | 39 | 2.357638 | TCACCGCCGAAATTCGCA | 60.358 | 55.556 | 10.24 | 0.00 | 38.82 | 5.10 |
39 | 40 | 1.705337 | CTCACCGCCGAAATTCGCAT | 61.705 | 55.000 | 10.24 | 0.00 | 38.82 | 4.73 |
40 | 41 | 0.460459 | TCACCGCCGAAATTCGCATA | 60.460 | 50.000 | 10.24 | 0.00 | 38.82 | 3.14 |
41 | 42 | 0.586319 | CACCGCCGAAATTCGCATAT | 59.414 | 50.000 | 10.24 | 0.00 | 38.82 | 1.78 |
42 | 43 | 0.865769 | ACCGCCGAAATTCGCATATC | 59.134 | 50.000 | 10.24 | 0.00 | 38.82 | 1.63 |
43 | 44 | 0.179250 | CCGCCGAAATTCGCATATCG | 60.179 | 55.000 | 10.24 | 7.40 | 38.82 | 2.92 |
44 | 45 | 0.781787 | CGCCGAAATTCGCATATCGA | 59.218 | 50.000 | 10.24 | 0.00 | 46.88 | 3.59 |
62 | 63 | 3.139850 | TCGAATCTCGAGAGATGTACCC | 58.860 | 50.000 | 21.52 | 2.77 | 46.75 | 3.69 |
63 | 64 | 3.142951 | CGAATCTCGAGAGATGTACCCT | 58.857 | 50.000 | 21.52 | 0.00 | 46.75 | 4.34 |
64 | 65 | 3.187637 | CGAATCTCGAGAGATGTACCCTC | 59.812 | 52.174 | 21.52 | 7.93 | 46.75 | 4.30 |
65 | 66 | 3.866703 | ATCTCGAGAGATGTACCCTCA | 57.133 | 47.619 | 21.52 | 0.00 | 45.77 | 3.86 |
66 | 67 | 2.920524 | TCTCGAGAGATGTACCCTCAC | 58.079 | 52.381 | 12.08 | 7.22 | 40.84 | 3.51 |
67 | 68 | 1.600013 | CTCGAGAGATGTACCCTCACG | 59.400 | 57.143 | 6.58 | 18.79 | 42.97 | 4.35 |
68 | 69 | 1.208776 | TCGAGAGATGTACCCTCACGA | 59.791 | 52.381 | 21.50 | 21.50 | 46.04 | 4.35 |
69 | 70 | 2.014857 | CGAGAGATGTACCCTCACGAA | 58.985 | 52.381 | 19.58 | 0.00 | 43.83 | 3.85 |
70 | 71 | 2.032302 | CGAGAGATGTACCCTCACGAAG | 59.968 | 54.545 | 19.58 | 0.00 | 43.83 | 3.79 |
71 | 72 | 3.280295 | GAGAGATGTACCCTCACGAAGA | 58.720 | 50.000 | 12.92 | 0.00 | 33.25 | 2.87 |
72 | 73 | 3.018149 | AGAGATGTACCCTCACGAAGAC | 58.982 | 50.000 | 12.92 | 0.00 | 33.25 | 3.01 |
73 | 74 | 2.099427 | GAGATGTACCCTCACGAAGACC | 59.901 | 54.545 | 7.31 | 0.00 | 0.00 | 3.85 |
74 | 75 | 2.100989 | GATGTACCCTCACGAAGACCT | 58.899 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
75 | 76 | 2.005370 | TGTACCCTCACGAAGACCTT | 57.995 | 50.000 | 0.00 | 0.00 | 0.00 | 3.50 |
76 | 77 | 2.322658 | TGTACCCTCACGAAGACCTTT | 58.677 | 47.619 | 0.00 | 0.00 | 0.00 | 3.11 |
77 | 78 | 2.298163 | TGTACCCTCACGAAGACCTTTC | 59.702 | 50.000 | 0.00 | 0.00 | 0.00 | 2.62 |
78 | 79 | 0.317479 | ACCCTCACGAAGACCTTTCG | 59.683 | 55.000 | 7.66 | 7.66 | 46.36 | 3.46 |
79 | 80 | 0.389948 | CCCTCACGAAGACCTTTCGG | 60.390 | 60.000 | 13.06 | 3.61 | 45.34 | 4.30 |
81 | 82 | 1.419374 | CTCACGAAGACCTTTCGGTG | 58.581 | 55.000 | 13.06 | 9.02 | 45.73 | 4.94 |
82 | 83 | 1.000607 | CTCACGAAGACCTTTCGGTGA | 60.001 | 52.381 | 13.06 | 11.98 | 45.73 | 4.02 |
83 | 84 | 1.409790 | TCACGAAGACCTTTCGGTGAA | 59.590 | 47.619 | 13.06 | 0.00 | 45.73 | 3.18 |
84 | 85 | 1.525619 | CACGAAGACCTTTCGGTGAAC | 59.474 | 52.381 | 13.06 | 0.00 | 45.73 | 3.18 |
85 | 86 | 1.137479 | ACGAAGACCTTTCGGTGAACA | 59.863 | 47.619 | 13.06 | 0.00 | 45.73 | 3.18 |
86 | 87 | 1.525619 | CGAAGACCTTTCGGTGAACAC | 59.474 | 52.381 | 1.60 | 0.00 | 45.73 | 3.32 |
87 | 88 | 1.871676 | GAAGACCTTTCGGTGAACACC | 59.128 | 52.381 | 13.32 | 13.32 | 45.73 | 4.16 |
110 | 111 | 3.842923 | CGTGGAGGCGCAGGAGAT | 61.843 | 66.667 | 10.83 | 0.00 | 0.00 | 2.75 |
111 | 112 | 2.586792 | GTGGAGGCGCAGGAGATT | 59.413 | 61.111 | 10.83 | 0.00 | 0.00 | 2.40 |
112 | 113 | 1.817099 | GTGGAGGCGCAGGAGATTG | 60.817 | 63.158 | 10.83 | 0.00 | 0.00 | 2.67 |
113 | 114 | 2.899339 | GGAGGCGCAGGAGATTGC | 60.899 | 66.667 | 10.83 | 0.00 | 40.67 | 3.56 |
114 | 115 | 2.188994 | GAGGCGCAGGAGATTGCT | 59.811 | 61.111 | 10.83 | 0.00 | 41.90 | 3.91 |
115 | 116 | 2.124819 | AGGCGCAGGAGATTGCTG | 60.125 | 61.111 | 10.83 | 0.00 | 41.90 | 4.41 |
124 | 125 | 3.806380 | CAGGAGATTGCTGCAGAATAGT | 58.194 | 45.455 | 20.43 | 5.56 | 34.49 | 2.12 |
125 | 126 | 4.953667 | CAGGAGATTGCTGCAGAATAGTA | 58.046 | 43.478 | 20.43 | 0.00 | 34.49 | 1.82 |
126 | 127 | 5.549347 | CAGGAGATTGCTGCAGAATAGTAT | 58.451 | 41.667 | 20.43 | 0.00 | 34.49 | 2.12 |
127 | 128 | 5.408909 | CAGGAGATTGCTGCAGAATAGTATG | 59.591 | 44.000 | 20.43 | 2.60 | 34.49 | 2.39 |
128 | 129 | 4.153835 | GGAGATTGCTGCAGAATAGTATGC | 59.846 | 45.833 | 20.43 | 2.23 | 42.53 | 3.14 |
135 | 136 | 3.797039 | TGCAGAATAGTATGCAGACACC | 58.203 | 45.455 | 14.90 | 0.00 | 46.73 | 4.16 |
136 | 137 | 2.797156 | GCAGAATAGTATGCAGACACCG | 59.203 | 50.000 | 14.90 | 0.00 | 41.77 | 4.94 |
137 | 138 | 2.797156 | CAGAATAGTATGCAGACACCGC | 59.203 | 50.000 | 14.90 | 0.35 | 0.00 | 5.68 |
138 | 139 | 2.135933 | GAATAGTATGCAGACACCGCC | 58.864 | 52.381 | 14.90 | 0.00 | 0.00 | 6.13 |
139 | 140 | 1.119684 | ATAGTATGCAGACACCGCCA | 58.880 | 50.000 | 14.90 | 0.00 | 0.00 | 5.69 |
140 | 141 | 0.174845 | TAGTATGCAGACACCGCCAC | 59.825 | 55.000 | 14.90 | 0.00 | 0.00 | 5.01 |
141 | 142 | 2.106683 | GTATGCAGACACCGCCACC | 61.107 | 63.158 | 6.60 | 0.00 | 0.00 | 4.61 |
142 | 143 | 2.290287 | TATGCAGACACCGCCACCT | 61.290 | 57.895 | 0.00 | 0.00 | 0.00 | 4.00 |
143 | 144 | 2.520465 | TATGCAGACACCGCCACCTG | 62.520 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
144 | 145 | 4.314440 | GCAGACACCGCCACCTGA | 62.314 | 66.667 | 0.00 | 0.00 | 0.00 | 3.86 |
145 | 146 | 2.665000 | CAGACACCGCCACCTGAT | 59.335 | 61.111 | 0.00 | 0.00 | 0.00 | 2.90 |
146 | 147 | 1.448540 | CAGACACCGCCACCTGATC | 60.449 | 63.158 | 0.00 | 0.00 | 0.00 | 2.92 |
147 | 148 | 2.509336 | GACACCGCCACCTGATCG | 60.509 | 66.667 | 0.00 | 0.00 | 0.00 | 3.69 |
148 | 149 | 2.994995 | ACACCGCCACCTGATCGA | 60.995 | 61.111 | 0.00 | 0.00 | 0.00 | 3.59 |
149 | 150 | 2.509336 | CACCGCCACCTGATCGAC | 60.509 | 66.667 | 0.00 | 0.00 | 0.00 | 4.20 |
150 | 151 | 3.771160 | ACCGCCACCTGATCGACC | 61.771 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
151 | 152 | 4.873129 | CCGCCACCTGATCGACCG | 62.873 | 72.222 | 0.00 | 0.00 | 0.00 | 4.79 |
152 | 153 | 4.873129 | CGCCACCTGATCGACCGG | 62.873 | 72.222 | 0.00 | 0.00 | 0.00 | 5.28 |
153 | 154 | 4.530857 | GCCACCTGATCGACCGGG | 62.531 | 72.222 | 1.88 | 1.88 | 38.55 | 5.73 |
154 | 155 | 3.075005 | CCACCTGATCGACCGGGT | 61.075 | 66.667 | 3.69 | 3.69 | 46.31 | 5.28 |
155 | 156 | 2.494918 | CACCTGATCGACCGGGTC | 59.505 | 66.667 | 7.56 | 17.38 | 43.67 | 4.46 |
156 | 157 | 2.052690 | CACCTGATCGACCGGGTCT | 61.053 | 63.158 | 23.86 | 7.13 | 43.67 | 3.85 |
157 | 158 | 2.052690 | ACCTGATCGACCGGGTCTG | 61.053 | 63.158 | 23.86 | 17.00 | 41.86 | 3.51 |
158 | 159 | 2.786495 | CCTGATCGACCGGGTCTGG | 61.786 | 68.421 | 23.86 | 10.38 | 0.00 | 3.86 |
159 | 160 | 1.753078 | CTGATCGACCGGGTCTGGA | 60.753 | 63.158 | 23.86 | 15.29 | 0.00 | 3.86 |
160 | 161 | 1.076265 | TGATCGACCGGGTCTGGAT | 60.076 | 57.895 | 23.86 | 19.04 | 0.00 | 3.41 |
161 | 162 | 1.107538 | TGATCGACCGGGTCTGGATC | 61.108 | 60.000 | 25.81 | 25.81 | 33.32 | 3.36 |
162 | 163 | 1.076265 | ATCGACCGGGTCTGGATCA | 60.076 | 57.895 | 23.86 | 3.64 | 0.00 | 2.92 |
163 | 164 | 1.392710 | ATCGACCGGGTCTGGATCAC | 61.393 | 60.000 | 23.86 | 0.00 | 0.00 | 3.06 |
164 | 165 | 2.901042 | GACCGGGTCTGGATCACC | 59.099 | 66.667 | 19.92 | 0.00 | 0.00 | 4.02 |
165 | 166 | 1.987855 | GACCGGGTCTGGATCACCA | 60.988 | 63.158 | 19.92 | 0.00 | 44.76 | 4.17 |
166 | 167 | 2.240162 | GACCGGGTCTGGATCACCAC | 62.240 | 65.000 | 19.92 | 0.00 | 41.77 | 4.16 |
167 | 168 | 2.584608 | CGGGTCTGGATCACCACC | 59.415 | 66.667 | 3.34 | 1.00 | 41.77 | 4.61 |
168 | 169 | 2.290287 | CGGGTCTGGATCACCACCA | 61.290 | 63.158 | 3.34 | 0.00 | 41.77 | 4.17 |
169 | 170 | 1.299976 | GGGTCTGGATCACCACCAC | 59.700 | 63.158 | 3.34 | 0.00 | 41.77 | 4.16 |
170 | 171 | 1.201429 | GGGTCTGGATCACCACCACT | 61.201 | 60.000 | 3.34 | 0.00 | 41.77 | 4.00 |
171 | 172 | 1.568504 | GGTCTGGATCACCACCACTA | 58.431 | 55.000 | 0.00 | 0.00 | 41.77 | 2.74 |
172 | 173 | 1.906574 | GGTCTGGATCACCACCACTAA | 59.093 | 52.381 | 0.00 | 0.00 | 41.77 | 2.24 |
173 | 174 | 2.093447 | GGTCTGGATCACCACCACTAAG | 60.093 | 54.545 | 0.00 | 0.00 | 41.77 | 2.18 |
174 | 175 | 1.555075 | TCTGGATCACCACCACTAAGC | 59.445 | 52.381 | 0.00 | 0.00 | 41.77 | 3.09 |
175 | 176 | 0.618458 | TGGATCACCACCACTAAGCC | 59.382 | 55.000 | 0.00 | 0.00 | 41.77 | 4.35 |
176 | 177 | 0.618458 | GGATCACCACCACTAAGCCA | 59.382 | 55.000 | 0.00 | 0.00 | 35.97 | 4.75 |
177 | 178 | 1.212935 | GGATCACCACCACTAAGCCAT | 59.787 | 52.381 | 0.00 | 0.00 | 35.97 | 4.40 |
178 | 179 | 2.357154 | GGATCACCACCACTAAGCCATT | 60.357 | 50.000 | 0.00 | 0.00 | 35.97 | 3.16 |
179 | 180 | 2.489938 | TCACCACCACTAAGCCATTC | 57.510 | 50.000 | 0.00 | 0.00 | 0.00 | 2.67 |
180 | 181 | 1.702401 | TCACCACCACTAAGCCATTCA | 59.298 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
181 | 182 | 2.086869 | CACCACCACTAAGCCATTCAG | 58.913 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
182 | 183 | 1.985159 | ACCACCACTAAGCCATTCAGA | 59.015 | 47.619 | 0.00 | 0.00 | 0.00 | 3.27 |
183 | 184 | 2.578021 | ACCACCACTAAGCCATTCAGAT | 59.422 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
184 | 185 | 3.209410 | CCACCACTAAGCCATTCAGATC | 58.791 | 50.000 | 0.00 | 0.00 | 0.00 | 2.75 |
185 | 186 | 3.209410 | CACCACTAAGCCATTCAGATCC | 58.791 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
186 | 187 | 2.158900 | ACCACTAAGCCATTCAGATCCG | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
187 | 188 | 2.103094 | CCACTAAGCCATTCAGATCCGA | 59.897 | 50.000 | 0.00 | 0.00 | 0.00 | 4.55 |
188 | 189 | 3.432186 | CCACTAAGCCATTCAGATCCGAA | 60.432 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
189 | 190 | 4.384056 | CACTAAGCCATTCAGATCCGAAT | 58.616 | 43.478 | 0.00 | 0.00 | 36.00 | 3.34 |
190 | 191 | 4.450419 | CACTAAGCCATTCAGATCCGAATC | 59.550 | 45.833 | 0.96 | 0.00 | 33.27 | 2.52 |
191 | 192 | 2.160822 | AGCCATTCAGATCCGAATCG | 57.839 | 50.000 | 0.96 | 0.00 | 36.97 | 3.34 |
201 | 202 | 4.946038 | CCGAATCGGGGCAACTAA | 57.054 | 55.556 | 14.91 | 0.00 | 44.15 | 2.24 |
202 | 203 | 2.390427 | CCGAATCGGGGCAACTAAC | 58.610 | 57.895 | 14.91 | 0.00 | 44.15 | 2.34 |
203 | 204 | 1.426041 | CCGAATCGGGGCAACTAACG | 61.426 | 60.000 | 14.91 | 0.00 | 44.15 | 3.18 |
204 | 205 | 1.719709 | GAATCGGGGCAACTAACGC | 59.280 | 57.895 | 0.00 | 0.00 | 0.00 | 4.84 |
205 | 206 | 2.032185 | GAATCGGGGCAACTAACGCG | 62.032 | 60.000 | 3.53 | 3.53 | 43.27 | 6.01 |
206 | 207 | 4.745751 | TCGGGGCAACTAACGCGG | 62.746 | 66.667 | 12.47 | 0.00 | 42.35 | 6.46 |
208 | 209 | 4.710167 | GGGGCAACTAACGCGGGT | 62.710 | 66.667 | 12.47 | 0.00 | 0.00 | 5.28 |
209 | 210 | 3.428282 | GGGCAACTAACGCGGGTG | 61.428 | 66.667 | 12.47 | 2.08 | 0.00 | 4.61 |
210 | 211 | 2.357760 | GGCAACTAACGCGGGTGA | 60.358 | 61.111 | 12.47 | 0.00 | 0.00 | 4.02 |
211 | 212 | 1.962306 | GGCAACTAACGCGGGTGAA | 60.962 | 57.895 | 12.47 | 0.00 | 0.00 | 3.18 |
212 | 213 | 1.205820 | GCAACTAACGCGGGTGAAC | 59.794 | 57.895 | 12.47 | 0.00 | 0.00 | 3.18 |
213 | 214 | 1.864176 | CAACTAACGCGGGTGAACC | 59.136 | 57.895 | 12.47 | 0.00 | 0.00 | 3.62 |
214 | 215 | 0.881159 | CAACTAACGCGGGTGAACCA | 60.881 | 55.000 | 12.47 | 0.00 | 40.22 | 3.67 |
215 | 216 | 0.035739 | AACTAACGCGGGTGAACCAT | 59.964 | 50.000 | 12.47 | 0.00 | 40.22 | 3.55 |
216 | 217 | 0.672401 | ACTAACGCGGGTGAACCATG | 60.672 | 55.000 | 12.47 | 0.00 | 40.22 | 3.66 |
217 | 218 | 1.366111 | CTAACGCGGGTGAACCATGG | 61.366 | 60.000 | 11.19 | 11.19 | 40.22 | 3.66 |
218 | 219 | 1.828461 | TAACGCGGGTGAACCATGGA | 61.828 | 55.000 | 21.47 | 0.00 | 40.22 | 3.41 |
219 | 220 | 3.124921 | CGCGGGTGAACCATGGAC | 61.125 | 66.667 | 21.47 | 12.58 | 40.22 | 4.02 |
220 | 221 | 3.124921 | GCGGGTGAACCATGGACG | 61.125 | 66.667 | 21.47 | 13.16 | 40.22 | 4.79 |
221 | 222 | 2.345991 | CGGGTGAACCATGGACGT | 59.654 | 61.111 | 21.47 | 2.39 | 40.22 | 4.34 |
222 | 223 | 1.740296 | CGGGTGAACCATGGACGTC | 60.740 | 63.158 | 21.47 | 7.13 | 40.22 | 4.34 |
223 | 224 | 1.373435 | GGGTGAACCATGGACGTCA | 59.627 | 57.895 | 21.47 | 15.48 | 39.85 | 4.35 |
224 | 225 | 0.953960 | GGGTGAACCATGGACGTCAC | 60.954 | 60.000 | 26.30 | 26.30 | 39.85 | 3.67 |
225 | 226 | 0.034896 | GGTGAACCATGGACGTCACT | 59.965 | 55.000 | 29.65 | 0.00 | 35.64 | 3.41 |
226 | 227 | 1.148310 | GTGAACCATGGACGTCACTG | 58.852 | 55.000 | 26.66 | 13.27 | 0.00 | 3.66 |
227 | 228 | 0.034756 | TGAACCATGGACGTCACTGG | 59.965 | 55.000 | 25.69 | 25.69 | 33.31 | 4.00 |
228 | 229 | 0.320374 | GAACCATGGACGTCACTGGA | 59.680 | 55.000 | 31.06 | 7.57 | 32.25 | 3.86 |
229 | 230 | 0.321671 | AACCATGGACGTCACTGGAG | 59.678 | 55.000 | 31.06 | 13.33 | 32.25 | 3.86 |
230 | 231 | 0.832135 | ACCATGGACGTCACTGGAGT | 60.832 | 55.000 | 31.06 | 14.78 | 32.25 | 3.85 |
231 | 232 | 0.321671 | CCATGGACGTCACTGGAGTT | 59.678 | 55.000 | 24.06 | 0.00 | 0.00 | 3.01 |
232 | 233 | 1.432514 | CATGGACGTCACTGGAGTTG | 58.567 | 55.000 | 18.91 | 0.00 | 0.00 | 3.16 |
233 | 234 | 0.320771 | ATGGACGTCACTGGAGTTGC | 60.321 | 55.000 | 18.91 | 0.00 | 0.00 | 4.17 |
234 | 235 | 2.022129 | GGACGTCACTGGAGTTGCG | 61.022 | 63.158 | 18.91 | 0.00 | 0.00 | 4.85 |
235 | 236 | 2.022129 | GACGTCACTGGAGTTGCGG | 61.022 | 63.158 | 11.55 | 0.00 | 0.00 | 5.69 |
236 | 237 | 2.029073 | CGTCACTGGAGTTGCGGT | 59.971 | 61.111 | 0.00 | 0.00 | 0.00 | 5.68 |
237 | 238 | 1.594293 | CGTCACTGGAGTTGCGGTT | 60.594 | 57.895 | 0.00 | 0.00 | 0.00 | 4.44 |
238 | 239 | 1.831389 | CGTCACTGGAGTTGCGGTTG | 61.831 | 60.000 | 0.00 | 0.00 | 0.00 | 3.77 |
239 | 240 | 1.891919 | TCACTGGAGTTGCGGTTGC | 60.892 | 57.895 | 0.00 | 0.00 | 43.20 | 4.17 |
240 | 241 | 2.594592 | ACTGGAGTTGCGGTTGCC | 60.595 | 61.111 | 0.00 | 0.00 | 41.78 | 4.52 |
241 | 242 | 3.365265 | CTGGAGTTGCGGTTGCCC | 61.365 | 66.667 | 0.00 | 0.00 | 41.78 | 5.36 |
251 | 252 | 3.134127 | GGTTGCCCGCCATCAGAC | 61.134 | 66.667 | 0.00 | 0.00 | 0.00 | 3.51 |
252 | 253 | 3.134127 | GTTGCCCGCCATCAGACC | 61.134 | 66.667 | 0.00 | 0.00 | 0.00 | 3.85 |
253 | 254 | 4.424711 | TTGCCCGCCATCAGACCC | 62.425 | 66.667 | 0.00 | 0.00 | 0.00 | 4.46 |
256 | 257 | 4.530857 | CCCGCCATCAGACCCGAC | 62.531 | 72.222 | 0.00 | 0.00 | 0.00 | 4.79 |
257 | 258 | 4.530857 | CCGCCATCAGACCCGACC | 62.531 | 72.222 | 0.00 | 0.00 | 0.00 | 4.79 |
258 | 259 | 4.873129 | CGCCATCAGACCCGACCG | 62.873 | 72.222 | 0.00 | 0.00 | 0.00 | 4.79 |
260 | 261 | 4.530857 | CCATCAGACCCGACCGCC | 62.531 | 72.222 | 0.00 | 0.00 | 0.00 | 6.13 |
261 | 262 | 4.873129 | CATCAGACCCGACCGCCG | 62.873 | 72.222 | 0.00 | 0.00 | 38.18 | 6.46 |
287 | 288 | 3.503363 | GCATGGCAGCGGACAGTC | 61.503 | 66.667 | 0.00 | 0.00 | 33.72 | 3.51 |
288 | 289 | 3.190849 | CATGGCAGCGGACAGTCG | 61.191 | 66.667 | 0.00 | 0.00 | 33.72 | 4.18 |
298 | 299 | 3.138798 | GACAGTCGCCGGCTCCTA | 61.139 | 66.667 | 26.68 | 3.97 | 0.00 | 2.94 |
299 | 300 | 3.127352 | GACAGTCGCCGGCTCCTAG | 62.127 | 68.421 | 26.68 | 12.84 | 0.00 | 3.02 |
300 | 301 | 2.829003 | CAGTCGCCGGCTCCTAGA | 60.829 | 66.667 | 26.68 | 11.29 | 0.00 | 2.43 |
301 | 302 | 2.044252 | AGTCGCCGGCTCCTAGAA | 60.044 | 61.111 | 26.68 | 0.00 | 0.00 | 2.10 |
302 | 303 | 2.122167 | AGTCGCCGGCTCCTAGAAG | 61.122 | 63.158 | 26.68 | 6.06 | 0.00 | 2.85 |
303 | 304 | 3.528370 | TCGCCGGCTCCTAGAAGC | 61.528 | 66.667 | 26.68 | 0.00 | 41.73 | 3.86 |
310 | 311 | 2.532854 | GCTCCTAGAAGCCCATGGA | 58.467 | 57.895 | 15.22 | 0.00 | 36.22 | 3.41 |
335 | 336 | 2.606519 | CGTGGGAGGAGGGGTTGA | 60.607 | 66.667 | 0.00 | 0.00 | 0.00 | 3.18 |
354 | 355 | 4.078516 | GTTCGGCGGTGGCTAGGT | 62.079 | 66.667 | 7.21 | 0.00 | 39.81 | 3.08 |
372 | 373 | 1.470805 | GGTTTTGCGTCCAACTTGCTT | 60.471 | 47.619 | 0.00 | 0.00 | 0.00 | 3.91 |
379 | 380 | 0.386838 | GTCCAACTTGCTTGCTTGCT | 59.613 | 50.000 | 3.47 | 0.00 | 0.00 | 3.91 |
380 | 381 | 1.113788 | TCCAACTTGCTTGCTTGCTT | 58.886 | 45.000 | 3.47 | 0.00 | 0.00 | 3.91 |
430 | 440 | 0.243907 | AGATGGTGAGTGAACCGACG | 59.756 | 55.000 | 0.00 | 0.00 | 43.73 | 5.12 |
432 | 442 | 2.048503 | GGTGAGTGAACCGACGGG | 60.049 | 66.667 | 20.00 | 0.00 | 40.11 | 5.28 |
475 | 486 | 2.737376 | GGCGAGTCAACCCGTGTC | 60.737 | 66.667 | 0.00 | 0.00 | 0.00 | 3.67 |
488 | 499 | 1.488812 | CCCGTGTCCCTAATCATCCAA | 59.511 | 52.381 | 0.00 | 0.00 | 0.00 | 3.53 |
494 | 505 | 5.391950 | CGTGTCCCTAATCATCCAACTTTTG | 60.392 | 44.000 | 0.00 | 0.00 | 0.00 | 2.44 |
569 | 580 | 2.478134 | CACGCAGAAACTCAGAAGAAGG | 59.522 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
572 | 583 | 3.333804 | GCAGAAACTCAGAAGAAGGAGG | 58.666 | 50.000 | 0.00 | 0.00 | 35.45 | 4.30 |
575 | 586 | 3.260632 | AGAAACTCAGAAGAAGGAGGAGC | 59.739 | 47.826 | 0.00 | 0.00 | 35.45 | 4.70 |
576 | 587 | 1.567357 | ACTCAGAAGAAGGAGGAGCC | 58.433 | 55.000 | 0.00 | 0.00 | 35.45 | 4.70 |
577 | 588 | 0.459489 | CTCAGAAGAAGGAGGAGCCG | 59.541 | 60.000 | 0.00 | 0.00 | 43.43 | 5.52 |
745 | 784 | 1.604593 | CCCTCACCAAACCAGCCAG | 60.605 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
746 | 785 | 1.455849 | CCTCACCAAACCAGCCAGA | 59.544 | 57.895 | 0.00 | 0.00 | 0.00 | 3.86 |
760 | 799 | 1.008206 | AGCCAGACCATCTCTCTCCTT | 59.992 | 52.381 | 0.00 | 0.00 | 0.00 | 3.36 |
771 | 814 | 2.509548 | TCTCTCTCCTTCTCCCTCTCTG | 59.490 | 54.545 | 0.00 | 0.00 | 0.00 | 3.35 |
772 | 815 | 1.064017 | TCTCTCCTTCTCCCTCTCTGC | 60.064 | 57.143 | 0.00 | 0.00 | 0.00 | 4.26 |
773 | 816 | 0.032615 | TCTCCTTCTCCCTCTCTGCC | 60.033 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
774 | 817 | 1.002274 | TCCTTCTCCCTCTCTGCCC | 59.998 | 63.158 | 0.00 | 0.00 | 0.00 | 5.36 |
775 | 818 | 1.306482 | CCTTCTCCCTCTCTGCCCA | 60.306 | 63.158 | 0.00 | 0.00 | 0.00 | 5.36 |
776 | 819 | 1.621672 | CCTTCTCCCTCTCTGCCCAC | 61.622 | 65.000 | 0.00 | 0.00 | 0.00 | 4.61 |
944 | 995 | 2.676822 | AAGCTGTCGCCGAGGAGA | 60.677 | 61.111 | 0.00 | 0.00 | 36.60 | 3.71 |
955 | 1006 | 2.306847 | GCCGAGGAGAAAGAGAGAGAT | 58.693 | 52.381 | 0.00 | 0.00 | 0.00 | 2.75 |
956 | 1007 | 2.693074 | GCCGAGGAGAAAGAGAGAGATT | 59.307 | 50.000 | 0.00 | 0.00 | 0.00 | 2.40 |
962 | 1013 | 6.078456 | AGGAGAAAGAGAGAGATTGAGAGA | 57.922 | 41.667 | 0.00 | 0.00 | 0.00 | 3.10 |
968 | 1032 | 3.202818 | AGAGAGAGATTGAGAGAGGCAGA | 59.797 | 47.826 | 0.00 | 0.00 | 0.00 | 4.26 |
969 | 1033 | 3.559069 | AGAGAGATTGAGAGAGGCAGAG | 58.441 | 50.000 | 0.00 | 0.00 | 0.00 | 3.35 |
982 | 1046 | 2.735634 | GCAGAGAGCAGTTCGTCAG | 58.264 | 57.895 | 0.00 | 0.00 | 44.79 | 3.51 |
983 | 1047 | 0.038709 | GCAGAGAGCAGTTCGTCAGT | 60.039 | 55.000 | 0.00 | 0.00 | 44.79 | 3.41 |
985 | 1049 | 2.323959 | CAGAGAGCAGTTCGTCAGTTC | 58.676 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
986 | 1050 | 1.068885 | AGAGAGCAGTTCGTCAGTTCG | 60.069 | 52.381 | 0.00 | 0.00 | 0.00 | 3.95 |
987 | 1051 | 0.669077 | AGAGCAGTTCGTCAGTTCGT | 59.331 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
988 | 1052 | 1.053811 | GAGCAGTTCGTCAGTTCGTC | 58.946 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
989 | 1053 | 0.660595 | AGCAGTTCGTCAGTTCGTCG | 60.661 | 55.000 | 0.00 | 0.00 | 0.00 | 5.12 |
990 | 1054 | 0.933509 | GCAGTTCGTCAGTTCGTCGT | 60.934 | 55.000 | 0.00 | 0.00 | 0.00 | 4.34 |
991 | 1055 | 1.043224 | CAGTTCGTCAGTTCGTCGTC | 58.957 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
994 | 1058 | 0.110956 | TTCGTCAGTTCGTCGTCTCG | 60.111 | 55.000 | 0.00 | 0.00 | 0.00 | 4.04 |
1105 | 1174 | 1.741394 | GCCATTTCCAAGCTTGCATCC | 60.741 | 52.381 | 21.43 | 1.37 | 0.00 | 3.51 |
1149 | 1228 | 0.668401 | TGCTGTGCTGTGTGATCGAG | 60.668 | 55.000 | 0.00 | 0.00 | 0.00 | 4.04 |
1158 | 1237 | 3.774066 | CTGTGTGATCGAGCAGAATGTA | 58.226 | 45.455 | 2.20 | 0.00 | 39.31 | 2.29 |
1164 | 1259 | 2.736144 | TCGAGCAGAATGTACCGTTT | 57.264 | 45.000 | 0.00 | 0.00 | 39.31 | 3.60 |
1173 | 1268 | 4.794762 | CAGAATGTACCGTTTGATGCATTG | 59.205 | 41.667 | 0.00 | 0.00 | 0.00 | 2.82 |
1175 | 1270 | 2.509569 | TGTACCGTTTGATGCATTGGT | 58.490 | 42.857 | 0.00 | 7.16 | 0.00 | 3.67 |
1177 | 1272 | 2.723124 | ACCGTTTGATGCATTGGTTC | 57.277 | 45.000 | 0.00 | 0.00 | 0.00 | 3.62 |
1179 | 1274 | 1.068610 | CCGTTTGATGCATTGGTTCGT | 60.069 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
1180 | 1275 | 2.241722 | CGTTTGATGCATTGGTTCGTC | 58.758 | 47.619 | 0.00 | 0.00 | 0.00 | 4.20 |
1197 | 1292 | 1.805120 | CGTCGTTCCAGTGTTCTTGGT | 60.805 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
1201 | 1296 | 2.032924 | CGTTCCAGTGTTCTTGGTTTCC | 59.967 | 50.000 | 0.00 | 0.00 | 0.00 | 3.13 |
1227 | 1326 | 5.491982 | CACTAGGCTAGATTTGTTCTTGGT | 58.508 | 41.667 | 27.59 | 0.00 | 35.79 | 3.67 |
1231 | 1330 | 3.826729 | GGCTAGATTTGTTCTTGGTTGGT | 59.173 | 43.478 | 0.00 | 0.00 | 35.79 | 3.67 |
1241 | 1340 | 3.053831 | TCTTGGTTGGTCTTTCGATCC | 57.946 | 47.619 | 0.00 | 0.00 | 0.00 | 3.36 |
1252 | 1351 | 3.806521 | GTCTTTCGATCCATGTCCATCTG | 59.193 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
1258 | 1357 | 4.132336 | CGATCCATGTCCATCTGTCAAAT | 58.868 | 43.478 | 0.00 | 0.00 | 0.00 | 2.32 |
1261 | 1360 | 6.073385 | CGATCCATGTCCATCTGTCAAATTAG | 60.073 | 42.308 | 0.00 | 0.00 | 0.00 | 1.73 |
1264 | 1363 | 6.599244 | TCCATGTCCATCTGTCAAATTAGTTC | 59.401 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
1267 | 1366 | 7.009179 | TGTCCATCTGTCAAATTAGTTCTCT | 57.991 | 36.000 | 0.00 | 0.00 | 0.00 | 3.10 |
1279 | 1378 | 9.265901 | TCAAATTAGTTCTCTCTCTGAAACAAG | 57.734 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
1331 | 1433 | 8.405531 | CACAAGAAACTATCCTTTTCTTCACAA | 58.594 | 33.333 | 7.03 | 0.00 | 45.89 | 3.33 |
1334 | 1436 | 9.847224 | AAGAAACTATCCTTTTCTTCACAAGTA | 57.153 | 29.630 | 4.59 | 0.00 | 45.89 | 2.24 |
1335 | 1437 | 9.274206 | AGAAACTATCCTTTTCTTCACAAGTAC | 57.726 | 33.333 | 0.00 | 0.00 | 39.77 | 2.73 |
1336 | 1438 | 9.274206 | GAAACTATCCTTTTCTTCACAAGTACT | 57.726 | 33.333 | 0.00 | 0.00 | 31.39 | 2.73 |
1358 | 1460 | 7.527084 | ACTACAAATCTTTTCTCGAGTATGC | 57.473 | 36.000 | 13.13 | 0.00 | 0.00 | 3.14 |
1372 | 1474 | 4.870426 | TCGAGTATGCATTCTTGGTCTTTC | 59.130 | 41.667 | 17.73 | 0.00 | 0.00 | 2.62 |
1374 | 1476 | 5.220548 | CGAGTATGCATTCTTGGTCTTTCTG | 60.221 | 44.000 | 3.54 | 0.00 | 0.00 | 3.02 |
1375 | 1477 | 3.863142 | ATGCATTCTTGGTCTTTCTGC | 57.137 | 42.857 | 0.00 | 0.00 | 0.00 | 4.26 |
1379 | 1481 | 0.112412 | TTCTTGGTCTTTCTGCCCCC | 59.888 | 55.000 | 0.00 | 0.00 | 0.00 | 5.40 |
1380 | 1482 | 0.772124 | TCTTGGTCTTTCTGCCCCCT | 60.772 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
1381 | 1483 | 0.991920 | CTTGGTCTTTCTGCCCCCTA | 59.008 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
1412 | 1514 | 5.741982 | AGATTTTCTTGTGTTTGCGTTACAC | 59.258 | 36.000 | 8.38 | 8.38 | 44.73 | 2.90 |
1438 | 1540 | 6.653989 | AGTATTTTCTACCCCTGATGAACTG | 58.346 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1440 | 1542 | 4.553330 | TTTCTACCCCTGATGAACTGAC | 57.447 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
1441 | 1543 | 3.474798 | TCTACCCCTGATGAACTGACT | 57.525 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
1446 | 1548 | 3.244700 | ACCCCTGATGAACTGACTTTGAG | 60.245 | 47.826 | 0.00 | 0.00 | 0.00 | 3.02 |
1449 | 1551 | 3.436015 | CCTGATGAACTGACTTTGAGCTG | 59.564 | 47.826 | 0.00 | 0.00 | 0.00 | 4.24 |
1525 | 1661 | 0.321564 | TGAGGCATTTGACCGGTGAG | 60.322 | 55.000 | 14.63 | 0.00 | 0.00 | 3.51 |
1527 | 1663 | 2.700773 | GGCATTTGACCGGTGAGGC | 61.701 | 63.158 | 14.63 | 11.32 | 46.52 | 4.70 |
1540 | 1680 | 2.176792 | GAGGCGAAAAAGCTGGCG | 59.823 | 61.111 | 0.00 | 0.00 | 37.29 | 5.69 |
1619 | 1762 | 6.293135 | GGATCATAGGATTCTTTTCTGTTCGC | 60.293 | 42.308 | 0.00 | 0.00 | 32.67 | 4.70 |
1620 | 1763 | 4.876107 | TCATAGGATTCTTTTCTGTTCGCC | 59.124 | 41.667 | 0.00 | 0.00 | 0.00 | 5.54 |
1622 | 1765 | 1.465856 | GGATTCTTTTCTGTTCGCCGC | 60.466 | 52.381 | 0.00 | 0.00 | 0.00 | 6.53 |
1651 | 1820 | 7.748847 | AGTATTTTACCTGTAAAGTTGCGATG | 58.251 | 34.615 | 3.59 | 0.00 | 36.52 | 3.84 |
1652 | 1821 | 4.413495 | TTTACCTGTAAAGTTGCGATGC | 57.587 | 40.909 | 0.00 | 0.00 | 31.95 | 3.91 |
1682 | 1852 | 5.526506 | AATGCTGCTTGTTTTCTCTTCTT | 57.473 | 34.783 | 0.00 | 0.00 | 0.00 | 2.52 |
1728 | 1909 | 4.073293 | TCTTGGACTTCACACCTCTTTC | 57.927 | 45.455 | 0.00 | 0.00 | 0.00 | 2.62 |
1739 | 1920 | 9.362151 | ACTTCACACCTCTTTCCATTATTTTTA | 57.638 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 |
1741 | 1922 | 8.934023 | TCACACCTCTTTCCATTATTTTTAGT | 57.066 | 30.769 | 0.00 | 0.00 | 0.00 | 2.24 |
1744 | 1925 | 8.803235 | ACACCTCTTTCCATTATTTTTAGTTCC | 58.197 | 33.333 | 0.00 | 0.00 | 0.00 | 3.62 |
1745 | 1926 | 8.251026 | CACCTCTTTCCATTATTTTTAGTTCCC | 58.749 | 37.037 | 0.00 | 0.00 | 0.00 | 3.97 |
1747 | 1928 | 7.122204 | CCTCTTTCCATTATTTTTAGTTCCCGT | 59.878 | 37.037 | 0.00 | 0.00 | 0.00 | 5.28 |
1749 | 1930 | 8.301002 | TCTTTCCATTATTTTTAGTTCCCGTTG | 58.699 | 33.333 | 0.00 | 0.00 | 0.00 | 4.10 |
1751 | 1932 | 6.246919 | TCCATTATTTTTAGTTCCCGTTGGA | 58.753 | 36.000 | 0.00 | 0.00 | 39.54 | 3.53 |
1795 | 1980 | 5.178996 | CCTCAACAAGAATGTTCTCTCACTG | 59.821 | 44.000 | 0.00 | 0.00 | 46.78 | 3.66 |
1851 | 2040 | 8.814931 | TGGAGAATGTTTGGTAAATCAATCAAT | 58.185 | 29.630 | 0.00 | 0.00 | 32.34 | 2.57 |
1869 | 2059 | 6.806388 | ATCAATTTTTGGGAAAATGCTGTC | 57.194 | 33.333 | 0.00 | 0.00 | 42.97 | 3.51 |
1930 | 2120 | 3.676172 | CACGGCGTGTCAAAAGTATCTTA | 59.324 | 43.478 | 30.56 | 0.00 | 0.00 | 2.10 |
2004 | 2194 | 2.419324 | CTCAGCTTCTTCCATGTCTTGC | 59.581 | 50.000 | 0.00 | 0.00 | 0.00 | 4.01 |
2010 | 2200 | 2.416747 | TCTTCCATGTCTTGCTCAACG | 58.583 | 47.619 | 0.00 | 0.00 | 0.00 | 4.10 |
2011 | 2201 | 2.037121 | TCTTCCATGTCTTGCTCAACGA | 59.963 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
2013 | 2203 | 3.057969 | TCCATGTCTTGCTCAACGATT | 57.942 | 42.857 | 0.00 | 0.00 | 0.00 | 3.34 |
2014 | 2204 | 4.200838 | TCCATGTCTTGCTCAACGATTA | 57.799 | 40.909 | 0.00 | 0.00 | 0.00 | 1.75 |
2015 | 2205 | 4.769688 | TCCATGTCTTGCTCAACGATTAT | 58.230 | 39.130 | 0.00 | 0.00 | 0.00 | 1.28 |
2016 | 2206 | 4.571984 | TCCATGTCTTGCTCAACGATTATG | 59.428 | 41.667 | 0.00 | 0.00 | 0.00 | 1.90 |
2017 | 2207 | 4.333649 | CCATGTCTTGCTCAACGATTATGT | 59.666 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
2018 | 2208 | 5.523552 | CCATGTCTTGCTCAACGATTATGTA | 59.476 | 40.000 | 0.00 | 0.00 | 0.00 | 2.29 |
2025 | 2217 | 7.701078 | TCTTGCTCAACGATTATGTAGTAACTC | 59.299 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
2042 | 2234 | 4.383850 | AACTCTGAACAGATCATCCTCG | 57.616 | 45.455 | 4.96 | 0.00 | 37.44 | 4.63 |
2157 | 2354 | 5.461032 | TCTGCGTTTTACCCATTGAAATT | 57.539 | 34.783 | 0.00 | 0.00 | 0.00 | 1.82 |
2161 | 2358 | 7.757624 | TCTGCGTTTTACCCATTGAAATTATTC | 59.242 | 33.333 | 0.00 | 0.00 | 36.04 | 1.75 |
2177 | 2374 | 9.224267 | TGAAATTATTCCTGCTATATCTGAAGC | 57.776 | 33.333 | 0.00 | 0.00 | 35.64 | 3.86 |
2178 | 2375 | 8.572855 | AAATTATTCCTGCTATATCTGAAGCC | 57.427 | 34.615 | 0.00 | 0.00 | 37.97 | 4.35 |
2179 | 2376 | 6.686484 | TTATTCCTGCTATATCTGAAGCCA | 57.314 | 37.500 | 0.00 | 0.00 | 37.97 | 4.75 |
2182 | 2379 | 3.262660 | TCCTGCTATATCTGAAGCCATGG | 59.737 | 47.826 | 7.63 | 7.63 | 37.97 | 3.66 |
2183 | 2380 | 3.008813 | CCTGCTATATCTGAAGCCATGGT | 59.991 | 47.826 | 14.67 | 0.00 | 37.97 | 3.55 |
2184 | 2381 | 4.252073 | CTGCTATATCTGAAGCCATGGTC | 58.748 | 47.826 | 14.67 | 4.33 | 37.97 | 4.02 |
2185 | 2382 | 3.647590 | TGCTATATCTGAAGCCATGGTCA | 59.352 | 43.478 | 14.67 | 9.27 | 37.97 | 4.02 |
2186 | 2383 | 4.252073 | GCTATATCTGAAGCCATGGTCAG | 58.748 | 47.826 | 21.18 | 21.18 | 42.23 | 3.51 |
2189 | 2386 | 2.704464 | TCTGAAGCCATGGTCAGATG | 57.296 | 50.000 | 24.31 | 7.19 | 44.12 | 2.90 |
2190 | 2387 | 2.190538 | TCTGAAGCCATGGTCAGATGA | 58.809 | 47.619 | 24.31 | 9.08 | 44.12 | 2.92 |
2191 | 2388 | 2.775960 | TCTGAAGCCATGGTCAGATGAT | 59.224 | 45.455 | 24.31 | 0.33 | 44.12 | 2.45 |
2192 | 2389 | 2.879026 | CTGAAGCCATGGTCAGATGATG | 59.121 | 50.000 | 22.24 | 0.68 | 43.32 | 3.07 |
2193 | 2390 | 2.228059 | GAAGCCATGGTCAGATGATGG | 58.772 | 52.381 | 14.67 | 6.36 | 39.84 | 3.51 |
2194 | 2391 | 1.219773 | AGCCATGGTCAGATGATGGT | 58.780 | 50.000 | 14.67 | 0.00 | 39.17 | 3.55 |
2195 | 2392 | 1.142465 | AGCCATGGTCAGATGATGGTC | 59.858 | 52.381 | 14.67 | 0.00 | 39.17 | 4.02 |
2196 | 2393 | 1.142465 | GCCATGGTCAGATGATGGTCT | 59.858 | 52.381 | 14.67 | 0.00 | 39.17 | 3.85 |
2197 | 2394 | 2.422519 | GCCATGGTCAGATGATGGTCTT | 60.423 | 50.000 | 14.67 | 0.00 | 39.17 | 3.01 |
2198 | 2395 | 3.211865 | CCATGGTCAGATGATGGTCTTG | 58.788 | 50.000 | 2.57 | 0.00 | 33.26 | 3.02 |
2199 | 2396 | 3.211865 | CATGGTCAGATGATGGTCTTGG | 58.788 | 50.000 | 0.00 | 0.00 | 0.00 | 3.61 |
2204 | 2401 | 0.842635 | AGATGATGGTCTTGGGCTCC | 59.157 | 55.000 | 0.00 | 0.00 | 0.00 | 4.70 |
2268 | 2474 | 3.044059 | GAGCACACCGCAAGATGCC | 62.044 | 63.158 | 0.00 | 0.00 | 46.13 | 4.40 |
2280 | 2486 | 1.915614 | AAGATGCCGCTGCGTTTCAG | 61.916 | 55.000 | 21.59 | 6.08 | 45.62 | 3.02 |
2324 | 2530 | 2.752903 | ACTTGTAATTTGGATCCACGCC | 59.247 | 45.455 | 15.91 | 1.46 | 0.00 | 5.68 |
2350 | 2556 | 2.910199 | CCGCTCAGAATCTTTCCATGA | 58.090 | 47.619 | 0.00 | 0.00 | 0.00 | 3.07 |
2369 | 2575 | 2.952978 | TGAGTTCCTCTAGATCGGCTTC | 59.047 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2589 | 2811 | 0.825425 | TTCCGCTGGTTTCAATGGCA | 60.825 | 50.000 | 0.00 | 0.00 | 0.00 | 4.92 |
2609 | 2831 | 3.365820 | GCAGCTGTAATTTTGATGTGTGC | 59.634 | 43.478 | 16.64 | 0.00 | 0.00 | 4.57 |
2853 | 3075 | 2.358737 | GGACGTGGACAAGGGCAG | 60.359 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
3037 | 3259 | 3.357079 | GGCAGCTTGGTGTGGTCG | 61.357 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
3079 | 3301 | 1.532090 | GCGTCGTCTGATGAGATCGTT | 60.532 | 52.381 | 0.00 | 0.00 | 32.56 | 3.85 |
3085 | 3307 | 1.410517 | TCTGATGAGATCGTTGAGGCC | 59.589 | 52.381 | 0.00 | 0.00 | 0.00 | 5.19 |
3106 | 3328 | 4.379143 | CGGTGCTCGTCGTCGTCA | 62.379 | 66.667 | 1.33 | 0.00 | 38.33 | 4.35 |
3520 | 3742 | 1.210413 | CGATCTCCTGATACCCGCG | 59.790 | 63.158 | 0.00 | 0.00 | 32.19 | 6.46 |
3641 | 3863 | 0.316204 | GTTTGAGACGAACGGGGAGA | 59.684 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
3763 | 3985 | 2.284625 | ACCTCCATGCCCGAGTCA | 60.285 | 61.111 | 0.00 | 0.00 | 0.00 | 3.41 |
4642 | 4902 | 0.179119 | GGACCAAATGCTGCATGCTC | 60.179 | 55.000 | 20.33 | 11.24 | 43.37 | 4.26 |
4665 | 4925 | 5.656416 | TCACTTCAATTCAGGGTCTGTTTTT | 59.344 | 36.000 | 0.00 | 0.00 | 32.61 | 1.94 |
4756 | 5016 | 1.852942 | TCTTTGATACGATCGGCTGC | 58.147 | 50.000 | 20.98 | 6.33 | 0.00 | 5.25 |
4775 | 5035 | 5.239525 | GGCTGCTCTTTCTTTTTCTGTCTTA | 59.760 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
4797 | 5060 | 1.696988 | GCAAAAGGTATGGTTGTGCG | 58.303 | 50.000 | 0.00 | 0.00 | 0.00 | 5.34 |
4802 | 5065 | 4.174129 | GTATGGTTGTGCGGCGGC | 62.174 | 66.667 | 9.78 | 9.68 | 40.52 | 6.53 |
4820 | 5083 | 2.552031 | GGCGTCCTGGAATTTCTAGAC | 58.448 | 52.381 | 11.03 | 7.42 | 0.00 | 2.59 |
4825 | 5088 | 4.401519 | CGTCCTGGAATTTCTAGACCAGTA | 59.598 | 45.833 | 20.18 | 7.18 | 45.65 | 2.74 |
4828 | 5091 | 5.964477 | TCCTGGAATTTCTAGACCAGTACAT | 59.036 | 40.000 | 20.18 | 0.00 | 45.65 | 2.29 |
4831 | 5094 | 6.406370 | TGGAATTTCTAGACCAGTACATGTG | 58.594 | 40.000 | 9.11 | 0.00 | 0.00 | 3.21 |
4835 | 5098 | 4.245251 | TCTAGACCAGTACATGTGGCTA | 57.755 | 45.455 | 9.11 | 2.25 | 38.83 | 3.93 |
4836 | 5099 | 4.207955 | TCTAGACCAGTACATGTGGCTAG | 58.792 | 47.826 | 14.78 | 14.78 | 40.04 | 3.42 |
4837 | 5100 | 1.482593 | AGACCAGTACATGTGGCTAGC | 59.517 | 52.381 | 9.11 | 6.04 | 38.83 | 3.42 |
4838 | 5101 | 0.541863 | ACCAGTACATGTGGCTAGCC | 59.458 | 55.000 | 27.71 | 27.71 | 38.83 | 3.93 |
4842 | 5105 | 0.387929 | GTACATGTGGCTAGCCGCTA | 59.612 | 55.000 | 39.28 | 28.28 | 46.12 | 4.26 |
4847 | 5110 | 1.005630 | GTGGCTAGCCGCTAGGATG | 60.006 | 63.158 | 35.04 | 4.95 | 42.89 | 3.51 |
4858 | 5121 | 1.949525 | CGCTAGGATGGTGGAAAATGG | 59.050 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
4867 | 5130 | 3.226777 | TGGTGGAAAATGGTGACGATTT | 58.773 | 40.909 | 0.00 | 0.00 | 0.00 | 2.17 |
4878 | 5141 | 7.921786 | AATGGTGACGATTTTAGATGAAAGA | 57.078 | 32.000 | 0.00 | 0.00 | 0.00 | 2.52 |
4879 | 5142 | 6.721571 | TGGTGACGATTTTAGATGAAAGAC | 57.278 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
4881 | 5144 | 6.934645 | TGGTGACGATTTTAGATGAAAGACTT | 59.065 | 34.615 | 0.00 | 0.00 | 0.00 | 3.01 |
4921 | 5184 | 9.632807 | TTTTGAATTAATAAAGTCATCAACCGG | 57.367 | 29.630 | 0.00 | 0.00 | 39.27 | 5.28 |
4922 | 5185 | 6.791303 | TGAATTAATAAAGTCATCAACCGGC | 58.209 | 36.000 | 0.00 | 0.00 | 34.93 | 6.13 |
4925 | 5188 | 2.107950 | TAAAGTCATCAACCGGCCAG | 57.892 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
4926 | 5189 | 0.110486 | AAAGTCATCAACCGGCCAGT | 59.890 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
4927 | 5190 | 0.606401 | AAGTCATCAACCGGCCAGTG | 60.606 | 55.000 | 0.00 | 0.00 | 0.00 | 3.66 |
4935 | 5198 | 2.006888 | CAACCGGCCAGTGTTACATAG | 58.993 | 52.381 | 0.00 | 0.00 | 0.00 | 2.23 |
4936 | 5199 | 0.539986 | ACCGGCCAGTGTTACATAGG | 59.460 | 55.000 | 0.00 | 2.33 | 0.00 | 2.57 |
4939 | 5202 | 0.254747 | GGCCAGTGTTACATAGGGCA | 59.745 | 55.000 | 21.19 | 0.00 | 43.09 | 5.36 |
4941 | 5204 | 1.743394 | GCCAGTGTTACATAGGGCAAC | 59.257 | 52.381 | 16.20 | 0.00 | 41.02 | 4.17 |
4961 | 5225 | 3.062042 | ACCATAAAACAGTCGACCGAAC | 58.938 | 45.455 | 13.01 | 0.00 | 0.00 | 3.95 |
4964 | 5228 | 2.144482 | AAAACAGTCGACCGAACGAT | 57.856 | 45.000 | 13.01 | 0.00 | 43.93 | 3.73 |
4972 | 5236 | 1.064505 | TCGACCGAACGATACATGGAC | 59.935 | 52.381 | 0.00 | 0.00 | 37.37 | 4.02 |
4973 | 5237 | 1.202211 | CGACCGAACGATACATGGACA | 60.202 | 52.381 | 0.00 | 0.00 | 35.09 | 4.02 |
4974 | 5238 | 2.543031 | CGACCGAACGATACATGGACAT | 60.543 | 50.000 | 0.00 | 0.00 | 35.09 | 3.06 |
4984 | 5248 | 5.011023 | ACGATACATGGACATGATAGAGCAA | 59.989 | 40.000 | 18.38 | 0.00 | 41.20 | 3.91 |
4986 | 5250 | 4.767578 | ACATGGACATGATAGAGCAACT | 57.232 | 40.909 | 18.38 | 0.00 | 41.20 | 3.16 |
4990 | 5254 | 5.675684 | TGGACATGATAGAGCAACTTACA | 57.324 | 39.130 | 0.00 | 0.00 | 0.00 | 2.41 |
4994 | 5258 | 6.369059 | ACATGATAGAGCAACTTACAATGC | 57.631 | 37.500 | 0.00 | 0.00 | 42.87 | 3.56 |
5003 | 5267 | 4.050553 | GCAACTTACAATGCAACACACAT | 58.949 | 39.130 | 0.00 | 0.00 | 42.12 | 3.21 |
5063 | 5327 | 6.363357 | CGATAATTGATTGATCGTGCACTAGA | 59.637 | 38.462 | 16.19 | 6.05 | 38.10 | 2.43 |
5093 | 5359 | 0.251922 | TAGGTACAAGGGGTGCGACT | 60.252 | 55.000 | 0.00 | 0.00 | 32.16 | 4.18 |
5403 | 5671 | 1.767692 | GGTGATGGACAGGGTTGGT | 59.232 | 57.895 | 0.00 | 0.00 | 0.00 | 3.67 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 4.870426 | TGAGATGAAAACTACGGATCAAGC | 59.130 | 41.667 | 0.00 | 0.00 | 0.00 | 4.01 |
1 | 2 | 5.292101 | GGTGAGATGAAAACTACGGATCAAG | 59.708 | 44.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2 | 3 | 5.175859 | GGTGAGATGAAAACTACGGATCAA | 58.824 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
3 | 4 | 4.676986 | CGGTGAGATGAAAACTACGGATCA | 60.677 | 45.833 | 0.00 | 0.00 | 0.00 | 2.92 |
4 | 5 | 3.797256 | CGGTGAGATGAAAACTACGGATC | 59.203 | 47.826 | 0.00 | 0.00 | 0.00 | 3.36 |
5 | 6 | 3.782046 | CGGTGAGATGAAAACTACGGAT | 58.218 | 45.455 | 0.00 | 0.00 | 0.00 | 4.18 |
6 | 7 | 2.673043 | GCGGTGAGATGAAAACTACGGA | 60.673 | 50.000 | 0.00 | 0.00 | 0.00 | 4.69 |
7 | 8 | 1.659098 | GCGGTGAGATGAAAACTACGG | 59.341 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
8 | 9 | 1.659098 | GGCGGTGAGATGAAAACTACG | 59.341 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
9 | 10 | 1.659098 | CGGCGGTGAGATGAAAACTAC | 59.341 | 52.381 | 0.00 | 0.00 | 0.00 | 2.73 |
10 | 11 | 1.546923 | TCGGCGGTGAGATGAAAACTA | 59.453 | 47.619 | 7.21 | 0.00 | 0.00 | 2.24 |
11 | 12 | 0.320374 | TCGGCGGTGAGATGAAAACT | 59.680 | 50.000 | 7.21 | 0.00 | 0.00 | 2.66 |
12 | 13 | 1.153353 | TTCGGCGGTGAGATGAAAAC | 58.847 | 50.000 | 7.21 | 0.00 | 0.00 | 2.43 |
13 | 14 | 1.885560 | TTTCGGCGGTGAGATGAAAA | 58.114 | 45.000 | 7.21 | 0.00 | 0.00 | 2.29 |
14 | 15 | 2.107950 | ATTTCGGCGGTGAGATGAAA | 57.892 | 45.000 | 7.21 | 0.00 | 33.56 | 2.69 |
15 | 16 | 2.006888 | GAATTTCGGCGGTGAGATGAA | 58.993 | 47.619 | 7.21 | 0.00 | 0.00 | 2.57 |
16 | 17 | 1.651987 | GAATTTCGGCGGTGAGATGA | 58.348 | 50.000 | 7.21 | 0.00 | 0.00 | 2.92 |
17 | 18 | 0.301687 | CGAATTTCGGCGGTGAGATG | 59.698 | 55.000 | 7.21 | 0.00 | 36.00 | 2.90 |
18 | 19 | 1.429148 | GCGAATTTCGGCGGTGAGAT | 61.429 | 55.000 | 19.53 | 0.00 | 40.84 | 2.75 |
19 | 20 | 2.098233 | GCGAATTTCGGCGGTGAGA | 61.098 | 57.895 | 19.53 | 0.00 | 40.84 | 3.27 |
20 | 21 | 1.705337 | ATGCGAATTTCGGCGGTGAG | 61.705 | 55.000 | 19.53 | 0.00 | 40.84 | 3.51 |
21 | 22 | 0.460459 | TATGCGAATTTCGGCGGTGA | 60.460 | 50.000 | 19.53 | 0.00 | 40.84 | 4.02 |
22 | 23 | 0.586319 | ATATGCGAATTTCGGCGGTG | 59.414 | 50.000 | 19.53 | 0.00 | 40.84 | 4.94 |
23 | 24 | 0.865769 | GATATGCGAATTTCGGCGGT | 59.134 | 50.000 | 19.53 | 8.05 | 40.84 | 5.68 |
24 | 25 | 0.179250 | CGATATGCGAATTTCGGCGG | 60.179 | 55.000 | 19.53 | 0.00 | 44.57 | 6.13 |
25 | 26 | 3.258498 | CGATATGCGAATTTCGGCG | 57.742 | 52.632 | 19.53 | 0.00 | 44.57 | 6.46 |
42 | 43 | 3.142951 | AGGGTACATCTCTCGAGATTCG | 58.857 | 50.000 | 17.03 | 9.43 | 45.31 | 3.34 |
43 | 44 | 4.023536 | GTGAGGGTACATCTCTCGAGATTC | 60.024 | 50.000 | 17.03 | 0.00 | 45.31 | 2.52 |
44 | 45 | 3.886505 | GTGAGGGTACATCTCTCGAGATT | 59.113 | 47.826 | 17.03 | 3.72 | 45.31 | 2.40 |
45 | 46 | 3.482436 | GTGAGGGTACATCTCTCGAGAT | 58.518 | 50.000 | 17.03 | 3.23 | 46.09 | 2.75 |
46 | 47 | 2.742204 | CGTGAGGGTACATCTCTCGAGA | 60.742 | 54.545 | 23.36 | 15.70 | 46.09 | 4.04 |
47 | 48 | 1.600013 | CGTGAGGGTACATCTCTCGAG | 59.400 | 57.143 | 23.36 | 5.93 | 46.09 | 4.04 |
48 | 49 | 1.208776 | TCGTGAGGGTACATCTCTCGA | 59.791 | 52.381 | 24.93 | 24.93 | 46.09 | 4.04 |
49 | 50 | 1.664873 | TCGTGAGGGTACATCTCTCG | 58.335 | 55.000 | 22.49 | 22.49 | 46.09 | 4.04 |
50 | 51 | 3.065648 | GTCTTCGTGAGGGTACATCTCTC | 59.934 | 52.174 | 14.02 | 10.52 | 43.58 | 3.20 |
51 | 52 | 3.018149 | GTCTTCGTGAGGGTACATCTCT | 58.982 | 50.000 | 14.02 | 0.00 | 32.78 | 3.10 |
52 | 53 | 2.099427 | GGTCTTCGTGAGGGTACATCTC | 59.901 | 54.545 | 8.10 | 8.10 | 0.00 | 2.75 |
53 | 54 | 2.100989 | GGTCTTCGTGAGGGTACATCT | 58.899 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
54 | 55 | 2.100989 | AGGTCTTCGTGAGGGTACATC | 58.899 | 52.381 | 0.00 | 0.00 | 0.00 | 3.06 |
55 | 56 | 2.233305 | AGGTCTTCGTGAGGGTACAT | 57.767 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
56 | 57 | 2.005370 | AAGGTCTTCGTGAGGGTACA | 57.995 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
57 | 58 | 2.670509 | CGAAAGGTCTTCGTGAGGGTAC | 60.671 | 54.545 | 0.00 | 0.00 | 37.18 | 3.34 |
58 | 59 | 1.542915 | CGAAAGGTCTTCGTGAGGGTA | 59.457 | 52.381 | 0.00 | 0.00 | 37.18 | 3.69 |
59 | 60 | 0.317479 | CGAAAGGTCTTCGTGAGGGT | 59.683 | 55.000 | 0.00 | 0.00 | 37.18 | 4.34 |
60 | 61 | 3.123674 | CGAAAGGTCTTCGTGAGGG | 57.876 | 57.895 | 0.00 | 0.00 | 37.18 | 4.30 |
93 | 94 | 3.376935 | AATCTCCTGCGCCTCCACG | 62.377 | 63.158 | 4.18 | 0.00 | 0.00 | 4.94 |
94 | 95 | 1.817099 | CAATCTCCTGCGCCTCCAC | 60.817 | 63.158 | 4.18 | 0.00 | 0.00 | 4.02 |
95 | 96 | 2.586245 | CAATCTCCTGCGCCTCCA | 59.414 | 61.111 | 4.18 | 0.00 | 0.00 | 3.86 |
96 | 97 | 2.899339 | GCAATCTCCTGCGCCTCC | 60.899 | 66.667 | 4.18 | 0.00 | 31.50 | 4.30 |
103 | 104 | 3.806380 | ACTATTCTGCAGCAATCTCCTG | 58.194 | 45.455 | 9.47 | 2.73 | 0.00 | 3.86 |
104 | 105 | 5.549347 | CATACTATTCTGCAGCAATCTCCT | 58.451 | 41.667 | 9.47 | 0.00 | 0.00 | 3.69 |
105 | 106 | 4.153835 | GCATACTATTCTGCAGCAATCTCC | 59.846 | 45.833 | 9.47 | 0.00 | 38.28 | 3.71 |
106 | 107 | 4.753610 | TGCATACTATTCTGCAGCAATCTC | 59.246 | 41.667 | 9.47 | 0.00 | 43.11 | 2.75 |
107 | 108 | 4.711399 | TGCATACTATTCTGCAGCAATCT | 58.289 | 39.130 | 9.47 | 2.36 | 43.11 | 2.40 |
114 | 115 | 3.737972 | CGGTGTCTGCATACTATTCTGCA | 60.738 | 47.826 | 3.71 | 0.00 | 45.60 | 4.41 |
115 | 116 | 2.797156 | CGGTGTCTGCATACTATTCTGC | 59.203 | 50.000 | 3.71 | 0.00 | 38.87 | 4.26 |
116 | 117 | 2.797156 | GCGGTGTCTGCATACTATTCTG | 59.203 | 50.000 | 3.71 | 0.00 | 0.00 | 3.02 |
117 | 118 | 2.224066 | GGCGGTGTCTGCATACTATTCT | 60.224 | 50.000 | 3.71 | 0.00 | 0.00 | 2.40 |
118 | 119 | 2.135933 | GGCGGTGTCTGCATACTATTC | 58.864 | 52.381 | 3.71 | 0.00 | 0.00 | 1.75 |
119 | 120 | 1.484653 | TGGCGGTGTCTGCATACTATT | 59.515 | 47.619 | 3.71 | 0.00 | 0.00 | 1.73 |
120 | 121 | 1.119684 | TGGCGGTGTCTGCATACTAT | 58.880 | 50.000 | 3.71 | 0.00 | 0.00 | 2.12 |
121 | 122 | 0.174845 | GTGGCGGTGTCTGCATACTA | 59.825 | 55.000 | 3.71 | 0.00 | 0.00 | 1.82 |
122 | 123 | 1.079127 | GTGGCGGTGTCTGCATACT | 60.079 | 57.895 | 3.71 | 0.00 | 0.00 | 2.12 |
123 | 124 | 2.106683 | GGTGGCGGTGTCTGCATAC | 61.107 | 63.158 | 3.03 | 0.00 | 0.00 | 2.39 |
124 | 125 | 2.267642 | GGTGGCGGTGTCTGCATA | 59.732 | 61.111 | 3.03 | 0.00 | 0.00 | 3.14 |
125 | 126 | 3.640407 | AGGTGGCGGTGTCTGCAT | 61.640 | 61.111 | 3.03 | 0.00 | 0.00 | 3.96 |
126 | 127 | 4.624364 | CAGGTGGCGGTGTCTGCA | 62.624 | 66.667 | 3.03 | 0.00 | 0.00 | 4.41 |
127 | 128 | 3.612247 | ATCAGGTGGCGGTGTCTGC | 62.612 | 63.158 | 0.00 | 0.00 | 0.00 | 4.26 |
128 | 129 | 1.448540 | GATCAGGTGGCGGTGTCTG | 60.449 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
129 | 130 | 2.982130 | GATCAGGTGGCGGTGTCT | 59.018 | 61.111 | 0.00 | 0.00 | 0.00 | 3.41 |
130 | 131 | 2.509336 | CGATCAGGTGGCGGTGTC | 60.509 | 66.667 | 0.00 | 0.00 | 0.00 | 3.67 |
131 | 132 | 2.994995 | TCGATCAGGTGGCGGTGT | 60.995 | 61.111 | 0.00 | 0.00 | 0.00 | 4.16 |
132 | 133 | 2.509336 | GTCGATCAGGTGGCGGTG | 60.509 | 66.667 | 0.00 | 0.00 | 0.00 | 4.94 |
133 | 134 | 3.771160 | GGTCGATCAGGTGGCGGT | 61.771 | 66.667 | 0.00 | 0.00 | 0.00 | 5.68 |
134 | 135 | 4.873129 | CGGTCGATCAGGTGGCGG | 62.873 | 72.222 | 0.00 | 0.00 | 0.00 | 6.13 |
135 | 136 | 4.873129 | CCGGTCGATCAGGTGGCG | 62.873 | 72.222 | 0.00 | 0.00 | 0.00 | 5.69 |
136 | 137 | 4.530857 | CCCGGTCGATCAGGTGGC | 62.531 | 72.222 | 0.00 | 0.00 | 0.00 | 5.01 |
137 | 138 | 3.075005 | ACCCGGTCGATCAGGTGG | 61.075 | 66.667 | 1.82 | 0.00 | 0.00 | 4.61 |
138 | 139 | 2.052690 | AGACCCGGTCGATCAGGTG | 61.053 | 63.158 | 8.71 | 1.51 | 37.67 | 4.00 |
139 | 140 | 2.052690 | CAGACCCGGTCGATCAGGT | 61.053 | 63.158 | 2.36 | 2.36 | 37.67 | 4.00 |
140 | 141 | 2.786495 | CCAGACCCGGTCGATCAGG | 61.786 | 68.421 | 12.04 | 0.00 | 37.67 | 3.86 |
141 | 142 | 1.109920 | ATCCAGACCCGGTCGATCAG | 61.110 | 60.000 | 12.04 | 1.05 | 37.67 | 2.90 |
142 | 143 | 1.076265 | ATCCAGACCCGGTCGATCA | 60.076 | 57.895 | 12.04 | 0.00 | 37.67 | 2.92 |
143 | 144 | 1.107538 | TGATCCAGACCCGGTCGATC | 61.108 | 60.000 | 20.53 | 20.53 | 37.67 | 3.69 |
144 | 145 | 1.076265 | TGATCCAGACCCGGTCGAT | 60.076 | 57.895 | 12.04 | 9.51 | 37.67 | 3.59 |
145 | 146 | 2.050350 | GTGATCCAGACCCGGTCGA | 61.050 | 63.158 | 12.04 | 4.83 | 37.67 | 4.20 |
146 | 147 | 2.494918 | GTGATCCAGACCCGGTCG | 59.505 | 66.667 | 12.04 | 7.12 | 37.67 | 4.79 |
147 | 148 | 1.987855 | TGGTGATCCAGACCCGGTC | 60.988 | 63.158 | 9.81 | 9.81 | 39.03 | 4.79 |
148 | 149 | 2.121832 | TGGTGATCCAGACCCGGT | 59.878 | 61.111 | 0.00 | 0.00 | 39.03 | 5.28 |
149 | 150 | 2.584608 | GTGGTGATCCAGACCCGG | 59.415 | 66.667 | 0.00 | 0.00 | 45.24 | 5.73 |
150 | 151 | 2.290287 | TGGTGGTGATCCAGACCCG | 61.290 | 63.158 | 0.00 | 0.00 | 45.24 | 5.28 |
151 | 152 | 1.201429 | AGTGGTGGTGATCCAGACCC | 61.201 | 60.000 | 0.00 | 0.00 | 45.24 | 4.46 |
152 | 153 | 1.568504 | TAGTGGTGGTGATCCAGACC | 58.431 | 55.000 | 0.00 | 0.00 | 45.24 | 3.85 |
153 | 154 | 2.678190 | GCTTAGTGGTGGTGATCCAGAC | 60.678 | 54.545 | 0.00 | 0.00 | 45.24 | 3.51 |
154 | 155 | 1.555075 | GCTTAGTGGTGGTGATCCAGA | 59.445 | 52.381 | 0.00 | 0.00 | 45.24 | 3.86 |
155 | 156 | 1.407437 | GGCTTAGTGGTGGTGATCCAG | 60.407 | 57.143 | 0.00 | 0.00 | 45.24 | 3.86 |
156 | 157 | 0.618458 | GGCTTAGTGGTGGTGATCCA | 59.382 | 55.000 | 0.00 | 0.00 | 42.05 | 3.41 |
157 | 158 | 0.618458 | TGGCTTAGTGGTGGTGATCC | 59.382 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
158 | 159 | 2.717639 | ATGGCTTAGTGGTGGTGATC | 57.282 | 50.000 | 0.00 | 0.00 | 0.00 | 2.92 |
159 | 160 | 2.308570 | TGAATGGCTTAGTGGTGGTGAT | 59.691 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
160 | 161 | 1.702401 | TGAATGGCTTAGTGGTGGTGA | 59.298 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
161 | 162 | 2.086869 | CTGAATGGCTTAGTGGTGGTG | 58.913 | 52.381 | 0.00 | 0.00 | 0.00 | 4.17 |
162 | 163 | 1.985159 | TCTGAATGGCTTAGTGGTGGT | 59.015 | 47.619 | 0.00 | 0.00 | 0.00 | 4.16 |
163 | 164 | 2.787473 | TCTGAATGGCTTAGTGGTGG | 57.213 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
164 | 165 | 3.209410 | GGATCTGAATGGCTTAGTGGTG | 58.791 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
165 | 166 | 2.158900 | CGGATCTGAATGGCTTAGTGGT | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 4.16 |
166 | 167 | 2.103094 | TCGGATCTGAATGGCTTAGTGG | 59.897 | 50.000 | 0.39 | 0.00 | 0.00 | 4.00 |
167 | 168 | 3.459232 | TCGGATCTGAATGGCTTAGTG | 57.541 | 47.619 | 0.39 | 0.00 | 0.00 | 2.74 |
168 | 169 | 4.636249 | GATTCGGATCTGAATGGCTTAGT | 58.364 | 43.478 | 30.16 | 8.35 | 38.65 | 2.24 |
169 | 170 | 3.677121 | CGATTCGGATCTGAATGGCTTAG | 59.323 | 47.826 | 30.16 | 12.64 | 38.65 | 2.18 |
170 | 171 | 3.653344 | CGATTCGGATCTGAATGGCTTA | 58.347 | 45.455 | 30.16 | 3.41 | 38.65 | 3.09 |
171 | 172 | 2.487934 | CGATTCGGATCTGAATGGCTT | 58.512 | 47.619 | 30.16 | 10.50 | 38.65 | 4.35 |
172 | 173 | 2.160822 | CGATTCGGATCTGAATGGCT | 57.839 | 50.000 | 30.16 | 10.87 | 38.65 | 4.75 |
185 | 186 | 2.003672 | CGTTAGTTGCCCCGATTCG | 58.996 | 57.895 | 0.00 | 0.00 | 0.00 | 3.34 |
186 | 187 | 1.719709 | GCGTTAGTTGCCCCGATTC | 59.280 | 57.895 | 0.00 | 0.00 | 0.00 | 2.52 |
187 | 188 | 2.104253 | CGCGTTAGTTGCCCCGATT | 61.104 | 57.895 | 0.00 | 0.00 | 0.00 | 3.34 |
188 | 189 | 2.510691 | CGCGTTAGTTGCCCCGAT | 60.511 | 61.111 | 0.00 | 0.00 | 0.00 | 4.18 |
189 | 190 | 4.745751 | CCGCGTTAGTTGCCCCGA | 62.746 | 66.667 | 4.92 | 0.00 | 0.00 | 5.14 |
191 | 192 | 4.710167 | ACCCGCGTTAGTTGCCCC | 62.710 | 66.667 | 4.92 | 0.00 | 0.00 | 5.80 |
192 | 193 | 3.428282 | CACCCGCGTTAGTTGCCC | 61.428 | 66.667 | 4.92 | 0.00 | 0.00 | 5.36 |
193 | 194 | 1.962306 | TTCACCCGCGTTAGTTGCC | 60.962 | 57.895 | 4.92 | 0.00 | 0.00 | 4.52 |
194 | 195 | 1.205820 | GTTCACCCGCGTTAGTTGC | 59.794 | 57.895 | 4.92 | 0.00 | 0.00 | 4.17 |
195 | 196 | 0.881159 | TGGTTCACCCGCGTTAGTTG | 60.881 | 55.000 | 4.92 | 0.00 | 35.15 | 3.16 |
196 | 197 | 0.035739 | ATGGTTCACCCGCGTTAGTT | 59.964 | 50.000 | 4.92 | 0.00 | 35.15 | 2.24 |
197 | 198 | 0.672401 | CATGGTTCACCCGCGTTAGT | 60.672 | 55.000 | 4.92 | 0.00 | 35.15 | 2.24 |
198 | 199 | 1.366111 | CCATGGTTCACCCGCGTTAG | 61.366 | 60.000 | 4.92 | 0.00 | 35.15 | 2.34 |
199 | 200 | 1.376166 | CCATGGTTCACCCGCGTTA | 60.376 | 57.895 | 4.92 | 0.00 | 35.15 | 3.18 |
200 | 201 | 2.671619 | CCATGGTTCACCCGCGTT | 60.672 | 61.111 | 4.92 | 0.00 | 35.15 | 4.84 |
201 | 202 | 3.632080 | TCCATGGTTCACCCGCGT | 61.632 | 61.111 | 12.58 | 0.00 | 35.15 | 6.01 |
202 | 203 | 3.124921 | GTCCATGGTTCACCCGCG | 61.125 | 66.667 | 12.58 | 0.00 | 35.15 | 6.46 |
203 | 204 | 3.124921 | CGTCCATGGTTCACCCGC | 61.125 | 66.667 | 12.58 | 0.00 | 35.15 | 6.13 |
204 | 205 | 1.740296 | GACGTCCATGGTTCACCCG | 60.740 | 63.158 | 12.58 | 8.17 | 35.15 | 5.28 |
205 | 206 | 0.953960 | GTGACGTCCATGGTTCACCC | 60.954 | 60.000 | 22.84 | 8.30 | 34.29 | 4.61 |
206 | 207 | 0.034896 | AGTGACGTCCATGGTTCACC | 59.965 | 55.000 | 26.56 | 16.05 | 0.00 | 4.02 |
207 | 208 | 1.148310 | CAGTGACGTCCATGGTTCAC | 58.852 | 55.000 | 24.57 | 24.57 | 0.00 | 3.18 |
208 | 209 | 0.034756 | CCAGTGACGTCCATGGTTCA | 59.965 | 55.000 | 21.99 | 10.26 | 0.00 | 3.18 |
209 | 210 | 0.320374 | TCCAGTGACGTCCATGGTTC | 59.680 | 55.000 | 26.46 | 7.67 | 34.32 | 3.62 |
210 | 211 | 0.321671 | CTCCAGTGACGTCCATGGTT | 59.678 | 55.000 | 26.46 | 0.00 | 34.32 | 3.67 |
211 | 212 | 0.832135 | ACTCCAGTGACGTCCATGGT | 60.832 | 55.000 | 26.46 | 12.56 | 34.32 | 3.55 |
212 | 213 | 0.321671 | AACTCCAGTGACGTCCATGG | 59.678 | 55.000 | 23.53 | 23.53 | 0.00 | 3.66 |
213 | 214 | 1.432514 | CAACTCCAGTGACGTCCATG | 58.567 | 55.000 | 14.12 | 11.43 | 0.00 | 3.66 |
214 | 215 | 0.320771 | GCAACTCCAGTGACGTCCAT | 60.321 | 55.000 | 14.12 | 0.00 | 0.00 | 3.41 |
215 | 216 | 1.069090 | GCAACTCCAGTGACGTCCA | 59.931 | 57.895 | 14.12 | 0.00 | 0.00 | 4.02 |
216 | 217 | 2.022129 | CGCAACTCCAGTGACGTCC | 61.022 | 63.158 | 14.12 | 4.42 | 0.00 | 4.79 |
217 | 218 | 2.022129 | CCGCAACTCCAGTGACGTC | 61.022 | 63.158 | 9.11 | 9.11 | 0.00 | 4.34 |
218 | 219 | 2.029073 | CCGCAACTCCAGTGACGT | 59.971 | 61.111 | 0.00 | 0.00 | 0.00 | 4.34 |
219 | 220 | 1.594293 | AACCGCAACTCCAGTGACG | 60.594 | 57.895 | 0.00 | 0.00 | 0.00 | 4.35 |
220 | 221 | 1.941812 | CAACCGCAACTCCAGTGAC | 59.058 | 57.895 | 0.00 | 0.00 | 0.00 | 3.67 |
221 | 222 | 1.891919 | GCAACCGCAACTCCAGTGA | 60.892 | 57.895 | 0.00 | 0.00 | 38.36 | 3.41 |
222 | 223 | 2.639286 | GCAACCGCAACTCCAGTG | 59.361 | 61.111 | 0.00 | 0.00 | 38.36 | 3.66 |
223 | 224 | 2.594592 | GGCAACCGCAACTCCAGT | 60.595 | 61.111 | 0.00 | 0.00 | 41.24 | 4.00 |
235 | 236 | 3.134127 | GGTCTGATGGCGGGCAAC | 61.134 | 66.667 | 8.78 | 6.60 | 0.00 | 4.17 |
236 | 237 | 4.424711 | GGGTCTGATGGCGGGCAA | 62.425 | 66.667 | 8.78 | 0.00 | 0.00 | 4.52 |
239 | 240 | 4.530857 | GTCGGGTCTGATGGCGGG | 62.531 | 72.222 | 0.00 | 0.00 | 0.00 | 6.13 |
240 | 241 | 4.530857 | GGTCGGGTCTGATGGCGG | 62.531 | 72.222 | 0.00 | 0.00 | 0.00 | 6.13 |
241 | 242 | 4.873129 | CGGTCGGGTCTGATGGCG | 62.873 | 72.222 | 0.00 | 0.00 | 0.00 | 5.69 |
243 | 244 | 4.530857 | GGCGGTCGGGTCTGATGG | 62.531 | 72.222 | 0.00 | 0.00 | 0.00 | 3.51 |
244 | 245 | 4.873129 | CGGCGGTCGGGTCTGATG | 62.873 | 72.222 | 0.00 | 0.00 | 34.75 | 3.07 |
270 | 271 | 3.503363 | GACTGTCCGCTGCCATGC | 61.503 | 66.667 | 0.00 | 0.00 | 0.00 | 4.06 |
271 | 272 | 3.190849 | CGACTGTCCGCTGCCATG | 61.191 | 66.667 | 1.55 | 0.00 | 0.00 | 3.66 |
281 | 282 | 3.127352 | CTAGGAGCCGGCGACTGTC | 62.127 | 68.421 | 28.70 | 18.15 | 0.00 | 3.51 |
282 | 283 | 3.141488 | CTAGGAGCCGGCGACTGT | 61.141 | 66.667 | 28.70 | 10.49 | 0.00 | 3.55 |
283 | 284 | 2.343163 | CTTCTAGGAGCCGGCGACTG | 62.343 | 65.000 | 28.70 | 20.06 | 0.00 | 3.51 |
284 | 285 | 2.044252 | TTCTAGGAGCCGGCGACT | 60.044 | 61.111 | 25.37 | 25.37 | 0.00 | 4.18 |
285 | 286 | 2.413765 | CTTCTAGGAGCCGGCGAC | 59.586 | 66.667 | 23.20 | 18.32 | 0.00 | 5.19 |
286 | 287 | 3.528370 | GCTTCTAGGAGCCGGCGA | 61.528 | 66.667 | 23.20 | 9.13 | 36.66 | 5.54 |
292 | 293 | 0.107643 | GTCCATGGGCTTCTAGGAGC | 59.892 | 60.000 | 15.30 | 15.30 | 41.96 | 4.70 |
293 | 294 | 0.761802 | GGTCCATGGGCTTCTAGGAG | 59.238 | 60.000 | 17.62 | 0.00 | 0.00 | 3.69 |
294 | 295 | 1.048724 | CGGTCCATGGGCTTCTAGGA | 61.049 | 60.000 | 17.62 | 0.00 | 0.00 | 2.94 |
295 | 296 | 1.447643 | CGGTCCATGGGCTTCTAGG | 59.552 | 63.158 | 17.62 | 0.00 | 0.00 | 3.02 |
296 | 297 | 1.447643 | CCGGTCCATGGGCTTCTAG | 59.552 | 63.158 | 17.62 | 2.99 | 0.00 | 2.43 |
297 | 298 | 2.742116 | GCCGGTCCATGGGCTTCTA | 61.742 | 63.158 | 17.62 | 0.00 | 45.93 | 2.10 |
298 | 299 | 4.115199 | GCCGGTCCATGGGCTTCT | 62.115 | 66.667 | 17.62 | 0.00 | 45.93 | 2.85 |
335 | 336 | 2.186903 | CTAGCCACCGCCGAACAT | 59.813 | 61.111 | 0.00 | 0.00 | 34.57 | 2.71 |
354 | 355 | 1.919918 | CAAGCAAGTTGGACGCAAAA | 58.080 | 45.000 | 4.75 | 0.00 | 31.82 | 2.44 |
372 | 373 | 2.115910 | CTCCCCCACAAGCAAGCA | 59.884 | 61.111 | 0.00 | 0.00 | 0.00 | 3.91 |
379 | 380 | 3.189646 | CAACCCCCTCCCCCACAA | 61.190 | 66.667 | 0.00 | 0.00 | 0.00 | 3.33 |
407 | 417 | 1.673033 | CGGTTCACTCACCATCTCCAC | 60.673 | 57.143 | 0.00 | 0.00 | 36.49 | 4.02 |
430 | 440 | 4.343814 | TCAAATGTTCTTTGGTTTCTCCCC | 59.656 | 41.667 | 0.00 | 0.00 | 34.77 | 4.81 |
432 | 442 | 6.748132 | TGATCAAATGTTCTTTGGTTTCTCC | 58.252 | 36.000 | 0.00 | 0.00 | 0.00 | 3.71 |
488 | 499 | 3.532641 | AAGATCTGCCTTCCCAAAAGT | 57.467 | 42.857 | 0.00 | 0.00 | 0.00 | 2.66 |
494 | 505 | 1.821136 | CAACCAAAGATCTGCCTTCCC | 59.179 | 52.381 | 0.00 | 0.00 | 0.00 | 3.97 |
498 | 509 | 0.613012 | GGCCAACCAAAGATCTGCCT | 60.613 | 55.000 | 10.03 | 0.00 | 34.61 | 4.75 |
569 | 580 | 2.258897 | GCTATACGGCGGCTCCTC | 59.741 | 66.667 | 13.24 | 0.00 | 0.00 | 3.71 |
643 | 674 | 0.109689 | CGCTAGCGGTCTATAGCCAC | 60.110 | 60.000 | 29.29 | 4.27 | 41.10 | 5.01 |
745 | 784 | 2.091333 | AGGGAGAAGGAGAGAGATGGTC | 60.091 | 54.545 | 0.00 | 0.00 | 0.00 | 4.02 |
746 | 785 | 1.936631 | AGGGAGAAGGAGAGAGATGGT | 59.063 | 52.381 | 0.00 | 0.00 | 0.00 | 3.55 |
760 | 799 | 2.363018 | CGTGGGCAGAGAGGGAGA | 60.363 | 66.667 | 0.00 | 0.00 | 0.00 | 3.71 |
887 | 938 | 1.396301 | CCTCTTGCTTTCATCTCACGC | 59.604 | 52.381 | 0.00 | 0.00 | 0.00 | 5.34 |
944 | 995 | 4.352009 | TGCCTCTCTCAATCTCTCTCTTT | 58.648 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
955 | 1006 | 1.184431 | CTGCTCTCTGCCTCTCTCAA | 58.816 | 55.000 | 0.00 | 0.00 | 42.00 | 3.02 |
956 | 1007 | 0.039472 | ACTGCTCTCTGCCTCTCTCA | 59.961 | 55.000 | 0.00 | 0.00 | 42.00 | 3.27 |
962 | 1013 | 1.181741 | TGACGAACTGCTCTCTGCCT | 61.182 | 55.000 | 0.00 | 0.00 | 42.00 | 4.75 |
968 | 1032 | 0.669077 | ACGAACTGACGAACTGCTCT | 59.331 | 50.000 | 0.00 | 0.00 | 37.03 | 4.09 |
969 | 1033 | 1.053811 | GACGAACTGACGAACTGCTC | 58.946 | 55.000 | 0.00 | 0.00 | 37.03 | 4.26 |
982 | 1046 | 2.845861 | ATGGCGACGAGACGACGAAC | 62.846 | 60.000 | 17.69 | 10.74 | 46.01 | 3.95 |
983 | 1047 | 2.683859 | ATGGCGACGAGACGACGAA | 61.684 | 57.895 | 17.69 | 7.11 | 46.01 | 3.85 |
985 | 1049 | 2.844224 | TTCATGGCGACGAGACGACG | 62.844 | 60.000 | 0.00 | 10.84 | 45.00 | 5.12 |
986 | 1050 | 1.134530 | CTTCATGGCGACGAGACGAC | 61.135 | 60.000 | 0.00 | 0.00 | 42.12 | 4.34 |
987 | 1051 | 1.136774 | CTTCATGGCGACGAGACGA | 59.863 | 57.895 | 0.00 | 0.00 | 35.09 | 4.20 |
988 | 1052 | 0.732880 | AACTTCATGGCGACGAGACG | 60.733 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
989 | 1053 | 0.992802 | GAACTTCATGGCGACGAGAC | 59.007 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
990 | 1054 | 0.601057 | TGAACTTCATGGCGACGAGA | 59.399 | 50.000 | 0.00 | 0.00 | 0.00 | 4.04 |
991 | 1055 | 1.645034 | ATGAACTTCATGGCGACGAG | 58.355 | 50.000 | 3.32 | 0.00 | 35.43 | 4.18 |
1111 | 1180 | 1.546476 | CAGGTAAGAAGACGCAGGACT | 59.454 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
1113 | 1182 | 0.246635 | GCAGGTAAGAAGACGCAGGA | 59.753 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
1114 | 1183 | 0.247736 | AGCAGGTAAGAAGACGCAGG | 59.752 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
1115 | 1184 | 1.337260 | ACAGCAGGTAAGAAGACGCAG | 60.337 | 52.381 | 0.00 | 0.00 | 0.00 | 5.18 |
1116 | 1185 | 0.679505 | ACAGCAGGTAAGAAGACGCA | 59.320 | 50.000 | 0.00 | 0.00 | 0.00 | 5.24 |
1117 | 1186 | 1.071605 | CACAGCAGGTAAGAAGACGC | 58.928 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
1118 | 1187 | 1.071605 | GCACAGCAGGTAAGAAGACG | 58.928 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
1119 | 1188 | 2.072298 | CAGCACAGCAGGTAAGAAGAC | 58.928 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
1120 | 1189 | 1.694150 | ACAGCACAGCAGGTAAGAAGA | 59.306 | 47.619 | 0.00 | 0.00 | 0.00 | 2.87 |
1126 | 1195 | 0.686789 | ATCACACAGCACAGCAGGTA | 59.313 | 50.000 | 0.00 | 0.00 | 0.00 | 3.08 |
1149 | 1228 | 2.161410 | TGCATCAAACGGTACATTCTGC | 59.839 | 45.455 | 0.00 | 0.73 | 0.00 | 4.26 |
1158 | 1237 | 1.068610 | CGAACCAATGCATCAAACGGT | 60.069 | 47.619 | 0.00 | 0.00 | 0.00 | 4.83 |
1164 | 1259 | 1.463056 | GAACGACGAACCAATGCATCA | 59.537 | 47.619 | 0.00 | 0.00 | 0.00 | 3.07 |
1173 | 1268 | 0.857287 | GAACACTGGAACGACGAACC | 59.143 | 55.000 | 0.00 | 4.95 | 0.00 | 3.62 |
1175 | 1270 | 2.198406 | CAAGAACACTGGAACGACGAA | 58.802 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
1177 | 1272 | 0.859232 | CCAAGAACACTGGAACGACG | 59.141 | 55.000 | 0.00 | 0.00 | 0.00 | 5.12 |
1179 | 1274 | 2.702592 | AACCAAGAACACTGGAACGA | 57.297 | 45.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1180 | 1275 | 2.032924 | GGAAACCAAGAACACTGGAACG | 59.967 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
1212 | 1307 | 6.017440 | CGAAAGACCAACCAAGAACAAATCTA | 60.017 | 38.462 | 0.00 | 0.00 | 37.42 | 1.98 |
1213 | 1308 | 5.221048 | CGAAAGACCAACCAAGAACAAATCT | 60.221 | 40.000 | 0.00 | 0.00 | 41.32 | 2.40 |
1221 | 1316 | 2.370519 | TGGATCGAAAGACCAACCAAGA | 59.629 | 45.455 | 0.00 | 0.00 | 46.97 | 3.02 |
1224 | 1319 | 2.039746 | ACATGGATCGAAAGACCAACCA | 59.960 | 45.455 | 0.00 | 0.00 | 46.97 | 3.67 |
1227 | 1326 | 2.304470 | TGGACATGGATCGAAAGACCAA | 59.696 | 45.455 | 0.00 | 0.00 | 46.97 | 3.67 |
1241 | 1340 | 7.551974 | AGAGAACTAATTTGACAGATGGACATG | 59.448 | 37.037 | 0.00 | 0.00 | 0.00 | 3.21 |
1252 | 1351 | 8.594881 | TGTTTCAGAGAGAGAACTAATTTGAC | 57.405 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
1258 | 1357 | 8.234136 | TGTACTTGTTTCAGAGAGAGAACTAA | 57.766 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
1261 | 1360 | 7.772332 | TTTGTACTTGTTTCAGAGAGAGAAC | 57.228 | 36.000 | 0.00 | 0.00 | 0.00 | 3.01 |
1264 | 1363 | 7.539712 | TGTTTTGTACTTGTTTCAGAGAGAG | 57.460 | 36.000 | 0.00 | 0.00 | 0.00 | 3.20 |
1267 | 1366 | 7.441890 | TGTTGTTTTGTACTTGTTTCAGAGA | 57.558 | 32.000 | 0.00 | 0.00 | 0.00 | 3.10 |
1279 | 1378 | 6.401955 | AAACACTGCATTGTTGTTTTGTAC | 57.598 | 33.333 | 21.48 | 0.00 | 39.70 | 2.90 |
1317 | 1416 | 8.974060 | ATTTGTAGTACTTGTGAAGAAAAGGA | 57.026 | 30.769 | 0.00 | 0.00 | 0.00 | 3.36 |
1327 | 1429 | 8.294341 | TCGAGAAAAGATTTGTAGTACTTGTG | 57.706 | 34.615 | 0.00 | 0.00 | 0.00 | 3.33 |
1331 | 1433 | 9.790389 | CATACTCGAGAAAAGATTTGTAGTACT | 57.210 | 33.333 | 21.68 | 0.00 | 0.00 | 2.73 |
1334 | 1436 | 7.097192 | TGCATACTCGAGAAAAGATTTGTAGT | 58.903 | 34.615 | 21.68 | 0.00 | 0.00 | 2.73 |
1335 | 1437 | 7.525688 | TGCATACTCGAGAAAAGATTTGTAG | 57.474 | 36.000 | 21.68 | 0.00 | 0.00 | 2.74 |
1336 | 1438 | 8.492673 | AATGCATACTCGAGAAAAGATTTGTA | 57.507 | 30.769 | 21.68 | 0.81 | 0.00 | 2.41 |
1337 | 1439 | 6.992063 | ATGCATACTCGAGAAAAGATTTGT | 57.008 | 33.333 | 21.68 | 0.00 | 0.00 | 2.83 |
1390 | 1492 | 5.942325 | GTGTAACGCAAACACAAGAAAAT | 57.058 | 34.783 | 9.81 | 0.00 | 45.26 | 1.82 |
1412 | 1514 | 5.531122 | TCATCAGGGGTAGAAAATACTCG | 57.469 | 43.478 | 0.00 | 0.00 | 0.00 | 4.18 |
1446 | 1548 | 2.124403 | ATAGCAGCAGCCCACAGC | 60.124 | 61.111 | 0.00 | 0.00 | 43.56 | 4.40 |
1449 | 1551 | 1.146930 | TAGCATAGCAGCAGCCCAC | 59.853 | 57.895 | 0.00 | 0.00 | 43.56 | 4.61 |
1520 | 1656 | 1.581447 | CCAGCTTTTTCGCCTCACC | 59.419 | 57.895 | 0.00 | 0.00 | 0.00 | 4.02 |
1525 | 1661 | 3.631487 | ATGCGCCAGCTTTTTCGCC | 62.631 | 57.895 | 4.18 | 0.88 | 46.14 | 5.54 |
1527 | 1663 | 1.514873 | GGATGCGCCAGCTTTTTCG | 60.515 | 57.895 | 4.18 | 0.00 | 45.42 | 3.46 |
1540 | 1680 | 4.147449 | GCCAAAAGGCGGGGATGC | 62.147 | 66.667 | 0.00 | 0.00 | 0.00 | 3.91 |
1542 | 1682 | 2.362889 | CAGCCAAAAGGCGGGGAT | 60.363 | 61.111 | 0.19 | 0.00 | 40.23 | 3.85 |
1548 | 1688 | 2.307934 | TGTTTGAACAGCCAAAAGGC | 57.692 | 45.000 | 0.00 | 0.00 | 37.72 | 4.35 |
1560 | 1700 | 1.686355 | ACGACCATGGCTTGTTTGAA | 58.314 | 45.000 | 13.04 | 0.00 | 0.00 | 2.69 |
1589 | 1732 | 9.956640 | ACAGAAAAGAATCCTATGATCCATATC | 57.043 | 33.333 | 0.00 | 0.00 | 0.00 | 1.63 |
1625 | 1768 | 7.355332 | TCGCAACTTTACAGGTAAAATACTC | 57.645 | 36.000 | 6.14 | 0.00 | 34.95 | 2.59 |
1651 | 1820 | 1.274596 | CAAGCAGCATTTTGATCGGC | 58.725 | 50.000 | 0.00 | 0.00 | 0.00 | 5.54 |
1652 | 1821 | 2.642139 | ACAAGCAGCATTTTGATCGG | 57.358 | 45.000 | 0.00 | 0.00 | 0.00 | 4.18 |
1728 | 1909 | 6.518208 | TCCAACGGGAACTAAAAATAATGG | 57.482 | 37.500 | 0.00 | 0.00 | 41.32 | 3.16 |
1739 | 1920 | 0.175073 | GATACGCTCCAACGGGAACT | 59.825 | 55.000 | 0.00 | 0.00 | 44.38 | 3.01 |
1741 | 1922 | 0.174845 | CAGATACGCTCCAACGGGAA | 59.825 | 55.000 | 0.00 | 0.00 | 44.38 | 3.97 |
1744 | 1925 | 1.836383 | GTACAGATACGCTCCAACGG | 58.164 | 55.000 | 0.00 | 0.00 | 37.37 | 4.44 |
1826 | 2011 | 9.657419 | AATTGATTGATTTACCAAACATTCTCC | 57.343 | 29.630 | 0.00 | 0.00 | 30.71 | 3.71 |
1851 | 2040 | 6.418057 | ACATAGACAGCATTTTCCCAAAAA | 57.582 | 33.333 | 0.00 | 0.00 | 38.66 | 1.94 |
2004 | 2194 | 9.011407 | GTTCAGAGTTACTACATAATCGTTGAG | 57.989 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
2013 | 2203 | 8.851145 | GGATGATCTGTTCAGAGTTACTACATA | 58.149 | 37.037 | 8.47 | 0.00 | 37.89 | 2.29 |
2014 | 2204 | 7.563188 | AGGATGATCTGTTCAGAGTTACTACAT | 59.437 | 37.037 | 8.47 | 0.00 | 37.89 | 2.29 |
2015 | 2205 | 6.892456 | AGGATGATCTGTTCAGAGTTACTACA | 59.108 | 38.462 | 8.47 | 0.00 | 37.89 | 2.74 |
2016 | 2206 | 7.341445 | AGGATGATCTGTTCAGAGTTACTAC | 57.659 | 40.000 | 8.47 | 0.00 | 37.89 | 2.73 |
2017 | 2207 | 6.261158 | CGAGGATGATCTGTTCAGAGTTACTA | 59.739 | 42.308 | 8.47 | 0.00 | 37.89 | 1.82 |
2018 | 2208 | 5.067153 | CGAGGATGATCTGTTCAGAGTTACT | 59.933 | 44.000 | 8.47 | 2.21 | 37.89 | 2.24 |
2025 | 2217 | 1.485397 | CGCGAGGATGATCTGTTCAG | 58.515 | 55.000 | 0.00 | 0.00 | 37.89 | 3.02 |
2042 | 2234 | 2.517450 | GGACAGCACGTATCTGCGC | 61.517 | 63.158 | 14.63 | 0.00 | 42.42 | 6.09 |
2111 | 2303 | 9.520515 | AGATGAATTGATTAAGTTACCTTGTGT | 57.479 | 29.630 | 0.00 | 0.00 | 31.89 | 3.72 |
2140 | 2337 | 8.040727 | AGCAGGAATAATTTCAATGGGTAAAAC | 58.959 | 33.333 | 0.00 | 0.00 | 33.23 | 2.43 |
2157 | 2354 | 6.352479 | CCATGGCTTCAGATATAGCAGGAATA | 60.352 | 42.308 | 0.00 | 0.00 | 39.15 | 1.75 |
2161 | 2358 | 3.008813 | ACCATGGCTTCAGATATAGCAGG | 59.991 | 47.826 | 13.04 | 0.00 | 39.15 | 4.85 |
2176 | 2373 | 1.142465 | AGACCATCATCTGACCATGGC | 59.858 | 52.381 | 13.04 | 5.35 | 40.85 | 4.40 |
2177 | 2374 | 3.211865 | CAAGACCATCATCTGACCATGG | 58.788 | 50.000 | 11.19 | 11.19 | 42.59 | 3.66 |
2178 | 2375 | 3.211865 | CCAAGACCATCATCTGACCATG | 58.788 | 50.000 | 0.00 | 0.00 | 0.00 | 3.66 |
2179 | 2376 | 2.174210 | CCCAAGACCATCATCTGACCAT | 59.826 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
2182 | 2379 | 1.211457 | AGCCCAAGACCATCATCTGAC | 59.789 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
2183 | 2380 | 1.487976 | GAGCCCAAGACCATCATCTGA | 59.512 | 52.381 | 0.00 | 0.00 | 0.00 | 3.27 |
2184 | 2381 | 1.476471 | GGAGCCCAAGACCATCATCTG | 60.476 | 57.143 | 0.00 | 0.00 | 0.00 | 2.90 |
2185 | 2382 | 0.842635 | GGAGCCCAAGACCATCATCT | 59.157 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2186 | 2383 | 0.548031 | TGGAGCCCAAGACCATCATC | 59.452 | 55.000 | 0.00 | 0.00 | 0.00 | 2.92 |
2187 | 2384 | 0.549950 | CTGGAGCCCAAGACCATCAT | 59.450 | 55.000 | 0.00 | 0.00 | 30.80 | 2.45 |
2188 | 2385 | 0.842030 | ACTGGAGCCCAAGACCATCA | 60.842 | 55.000 | 0.00 | 0.00 | 30.80 | 3.07 |
2189 | 2386 | 0.329596 | AACTGGAGCCCAAGACCATC | 59.670 | 55.000 | 0.00 | 0.00 | 30.80 | 3.51 |
2190 | 2387 | 1.561542 | CTAACTGGAGCCCAAGACCAT | 59.438 | 52.381 | 0.00 | 0.00 | 30.80 | 3.55 |
2191 | 2388 | 0.984230 | CTAACTGGAGCCCAAGACCA | 59.016 | 55.000 | 0.00 | 0.00 | 30.80 | 4.02 |
2192 | 2389 | 1.276622 | TCTAACTGGAGCCCAAGACC | 58.723 | 55.000 | 0.00 | 0.00 | 30.80 | 3.85 |
2193 | 2390 | 2.303311 | ACTTCTAACTGGAGCCCAAGAC | 59.697 | 50.000 | 0.00 | 0.00 | 30.80 | 3.01 |
2194 | 2391 | 2.621070 | ACTTCTAACTGGAGCCCAAGA | 58.379 | 47.619 | 0.00 | 0.00 | 30.80 | 3.02 |
2195 | 2392 | 3.425162 | AACTTCTAACTGGAGCCCAAG | 57.575 | 47.619 | 0.00 | 0.00 | 30.80 | 3.61 |
2196 | 2393 | 4.164981 | TCTAACTTCTAACTGGAGCCCAA | 58.835 | 43.478 | 0.00 | 0.00 | 30.80 | 4.12 |
2197 | 2394 | 3.786553 | TCTAACTTCTAACTGGAGCCCA | 58.213 | 45.455 | 0.00 | 0.00 | 0.00 | 5.36 |
2198 | 2395 | 4.020485 | TGTTCTAACTTCTAACTGGAGCCC | 60.020 | 45.833 | 0.00 | 0.00 | 0.00 | 5.19 |
2199 | 2396 | 5.047235 | TCTGTTCTAACTTCTAACTGGAGCC | 60.047 | 44.000 | 0.00 | 0.00 | 0.00 | 4.70 |
2204 | 2401 | 7.171508 | TGCATTGTCTGTTCTAACTTCTAACTG | 59.828 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
2280 | 2486 | 1.396301 | CAGAGCTTGACCGAAAGATGC | 59.604 | 52.381 | 0.00 | 0.00 | 0.00 | 3.91 |
2369 | 2575 | 5.505654 | GCATATACAAACTCGTGGAAATGGG | 60.506 | 44.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2418 | 2624 | 3.545481 | CGAGGCGCTACGTGCAAG | 61.545 | 66.667 | 7.64 | 0.00 | 41.25 | 4.01 |
2589 | 2811 | 3.253188 | ACGCACACATCAAAATTACAGCT | 59.747 | 39.130 | 0.00 | 0.00 | 0.00 | 4.24 |
2660 | 2882 | 3.842923 | CGCCTCCACGATCAGCCT | 61.843 | 66.667 | 0.00 | 0.00 | 34.06 | 4.58 |
2853 | 3075 | 1.272781 | CTCGATCTTGAACACGAGGC | 58.727 | 55.000 | 0.00 | 0.00 | 45.22 | 4.70 |
3019 | 3241 | 2.985847 | GACCACACCAAGCTGCCC | 60.986 | 66.667 | 0.00 | 0.00 | 0.00 | 5.36 |
3022 | 3244 | 0.249699 | TGTACGACCACACCAAGCTG | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 4.24 |
3026 | 3248 | 1.028130 | TACGTGTACGACCACACCAA | 58.972 | 50.000 | 11.79 | 1.41 | 44.88 | 3.67 |
3037 | 3259 | 0.785979 | CCTTGCGGTTGTACGTGTAC | 59.214 | 55.000 | 0.00 | 3.21 | 36.63 | 2.90 |
3209 | 3431 | 1.439228 | CGACGACATCAGAGGGCAT | 59.561 | 57.895 | 0.00 | 0.00 | 0.00 | 4.40 |
3214 | 3436 | 0.101399 | CTTCCCCGACGACATCAGAG | 59.899 | 60.000 | 0.00 | 0.00 | 0.00 | 3.35 |
3287 | 3509 | 3.103911 | GTCGTTGTCGTCCGCAGG | 61.104 | 66.667 | 0.00 | 0.00 | 42.66 | 4.85 |
3289 | 3511 | 3.258070 | ATCGTCGTTGTCGTCCGCA | 62.258 | 57.895 | 0.00 | 0.00 | 38.33 | 5.69 |
3290 | 3512 | 2.503375 | ATCGTCGTTGTCGTCCGC | 60.503 | 61.111 | 0.00 | 0.00 | 38.33 | 5.54 |
3294 | 3516 | 1.733041 | CAGGCATCGTCGTTGTCGT | 60.733 | 57.895 | 5.28 | 0.00 | 38.33 | 4.34 |
3295 | 3517 | 3.071459 | GCAGGCATCGTCGTTGTCG | 62.071 | 63.158 | 5.28 | 1.38 | 38.55 | 4.35 |
3317 | 3539 | 0.976641 | ATGGTCTCGAGCACTTCCAA | 59.023 | 50.000 | 7.81 | 0.00 | 42.02 | 3.53 |
3641 | 3863 | 1.122019 | AGCAAGGAAGGGTCGTCTGT | 61.122 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
4110 | 4347 | 4.329545 | TCCAGTTCCAGGTGCGCC | 62.330 | 66.667 | 8.71 | 8.71 | 0.00 | 6.53 |
4553 | 4793 | 0.108615 | CTCTGTACAGCCAACCTCCG | 60.109 | 60.000 | 18.45 | 0.00 | 0.00 | 4.63 |
4642 | 4902 | 5.520376 | AAAACAGACCCTGAATTGAAGTG | 57.480 | 39.130 | 0.45 | 0.00 | 35.18 | 3.16 |
4665 | 4925 | 6.569780 | TCGGATCAATACATTTCTCGAGAAA | 58.430 | 36.000 | 35.54 | 35.54 | 46.60 | 2.52 |
4670 | 4930 | 5.557136 | GCACTTCGGATCAATACATTTCTCG | 60.557 | 44.000 | 0.00 | 0.00 | 0.00 | 4.04 |
4756 | 5016 | 7.121974 | TGCGATAAGACAGAAAAAGAAAGAG | 57.878 | 36.000 | 0.00 | 0.00 | 0.00 | 2.85 |
4775 | 5035 | 2.094752 | GCACAACCATACCTTTTGCGAT | 60.095 | 45.455 | 0.00 | 0.00 | 0.00 | 4.58 |
4797 | 5060 | 2.750237 | AAATTCCAGGACGCCGCC | 60.750 | 61.111 | 0.00 | 0.00 | 0.00 | 6.13 |
4802 | 5065 | 3.786635 | CTGGTCTAGAAATTCCAGGACG | 58.213 | 50.000 | 16.07 | 0.00 | 42.38 | 4.79 |
4820 | 5083 | 0.530650 | CGGCTAGCCACATGTACTGG | 60.531 | 60.000 | 32.47 | 9.02 | 35.37 | 4.00 |
4835 | 5098 | 1.271840 | TTTCCACCATCCTAGCGGCT | 61.272 | 55.000 | 7.98 | 7.98 | 0.00 | 5.52 |
4836 | 5099 | 0.393808 | TTTTCCACCATCCTAGCGGC | 60.394 | 55.000 | 0.00 | 0.00 | 0.00 | 6.53 |
4837 | 5100 | 1.949525 | CATTTTCCACCATCCTAGCGG | 59.050 | 52.381 | 0.00 | 0.00 | 0.00 | 5.52 |
4838 | 5101 | 1.949525 | CCATTTTCCACCATCCTAGCG | 59.050 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
4842 | 5105 | 2.807676 | GTCACCATTTTCCACCATCCT | 58.192 | 47.619 | 0.00 | 0.00 | 0.00 | 3.24 |
4847 | 5110 | 3.934457 | AAATCGTCACCATTTTCCACC | 57.066 | 42.857 | 0.00 | 0.00 | 0.00 | 4.61 |
4855 | 5118 | 7.106239 | AGTCTTTCATCTAAAATCGTCACCAT | 58.894 | 34.615 | 0.00 | 0.00 | 0.00 | 3.55 |
4895 | 5158 | 9.632807 | CCGGTTGATGACTTTATTAATTCAAAA | 57.367 | 29.630 | 0.00 | 0.00 | 0.00 | 2.44 |
4906 | 5169 | 1.349688 | ACTGGCCGGTTGATGACTTTA | 59.650 | 47.619 | 12.85 | 0.00 | 0.00 | 1.85 |
4910 | 5173 | 0.889186 | AACACTGGCCGGTTGATGAC | 60.889 | 55.000 | 16.73 | 0.00 | 0.00 | 3.06 |
4914 | 5177 | 0.398696 | ATGTAACACTGGCCGGTTGA | 59.601 | 50.000 | 16.73 | 0.00 | 0.00 | 3.18 |
4915 | 5178 | 2.006888 | CTATGTAACACTGGCCGGTTG | 58.993 | 52.381 | 16.73 | 13.36 | 0.00 | 3.77 |
4917 | 5180 | 0.539986 | CCTATGTAACACTGGCCGGT | 59.460 | 55.000 | 12.85 | 12.85 | 0.00 | 5.28 |
4918 | 5181 | 0.179056 | CCCTATGTAACACTGGCCGG | 60.179 | 60.000 | 11.02 | 11.02 | 0.00 | 6.13 |
4920 | 5183 | 0.254747 | TGCCCTATGTAACACTGGCC | 59.745 | 55.000 | 0.00 | 0.00 | 38.10 | 5.36 |
4921 | 5184 | 1.743394 | GTTGCCCTATGTAACACTGGC | 59.257 | 52.381 | 0.00 | 0.00 | 39.16 | 4.85 |
4922 | 5185 | 2.290641 | TGGTTGCCCTATGTAACACTGG | 60.291 | 50.000 | 0.00 | 0.00 | 40.91 | 4.00 |
4925 | 5188 | 6.071840 | TGTTTTATGGTTGCCCTATGTAACAC | 60.072 | 38.462 | 0.00 | 0.00 | 40.91 | 3.32 |
4926 | 5189 | 6.010850 | TGTTTTATGGTTGCCCTATGTAACA | 58.989 | 36.000 | 0.00 | 0.00 | 40.91 | 2.41 |
4927 | 5190 | 6.152154 | ACTGTTTTATGGTTGCCCTATGTAAC | 59.848 | 38.462 | 0.00 | 0.00 | 38.68 | 2.50 |
4935 | 5198 | 2.095415 | GTCGACTGTTTTATGGTTGCCC | 60.095 | 50.000 | 8.70 | 0.00 | 0.00 | 5.36 |
4936 | 5199 | 2.095415 | GGTCGACTGTTTTATGGTTGCC | 60.095 | 50.000 | 16.46 | 0.00 | 0.00 | 4.52 |
4939 | 5202 | 3.389925 | TCGGTCGACTGTTTTATGGTT | 57.610 | 42.857 | 23.27 | 0.00 | 0.00 | 3.67 |
4941 | 5204 | 2.091588 | CGTTCGGTCGACTGTTTTATGG | 59.908 | 50.000 | 23.27 | 4.48 | 0.00 | 2.74 |
4945 | 5208 | 2.144482 | ATCGTTCGGTCGACTGTTTT | 57.856 | 45.000 | 23.27 | 3.63 | 42.56 | 2.43 |
4961 | 5225 | 5.064441 | TGCTCTATCATGTCCATGTATCG | 57.936 | 43.478 | 7.13 | 0.00 | 39.72 | 2.92 |
4964 | 5228 | 5.876651 | AGTTGCTCTATCATGTCCATGTA | 57.123 | 39.130 | 7.13 | 0.00 | 39.72 | 2.29 |
4972 | 5236 | 6.367686 | TGCATTGTAAGTTGCTCTATCATG | 57.632 | 37.500 | 0.00 | 0.00 | 39.60 | 3.07 |
4973 | 5237 | 6.375174 | TGTTGCATTGTAAGTTGCTCTATCAT | 59.625 | 34.615 | 0.00 | 0.00 | 39.60 | 2.45 |
4974 | 5238 | 5.704978 | TGTTGCATTGTAAGTTGCTCTATCA | 59.295 | 36.000 | 0.00 | 0.00 | 39.60 | 2.15 |
4984 | 5248 | 6.384258 | TGTTATGTGTGTTGCATTGTAAGT | 57.616 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
4986 | 5250 | 5.689514 | GCTTGTTATGTGTGTTGCATTGTAA | 59.310 | 36.000 | 0.00 | 0.00 | 0.00 | 2.41 |
4990 | 5254 | 4.589216 | AGCTTGTTATGTGTGTTGCATT | 57.411 | 36.364 | 0.00 | 0.00 | 0.00 | 3.56 |
4994 | 5258 | 6.494842 | ACACTTTAGCTTGTTATGTGTGTTG | 58.505 | 36.000 | 0.00 | 0.00 | 36.10 | 3.33 |
5003 | 5267 | 9.944376 | AATCATTCTCTACACTTTAGCTTGTTA | 57.056 | 29.630 | 0.00 | 0.00 | 0.00 | 2.41 |
5063 | 5327 | 7.093024 | GCACCCCTTGTACCTATATATATGTGT | 60.093 | 40.741 | 5.44 | 5.10 | 0.00 | 3.72 |
5349 | 5617 | 0.171231 | CGAGCTCGACATCCACTTCA | 59.829 | 55.000 | 32.06 | 0.00 | 43.02 | 3.02 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.