Multiple sequence alignment - TraesCS7D01G148500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G148500 chr7D 100.000 5078 0 0 1 5078 95226996 95221919 0.000000e+00 9378
1 TraesCS7D01G148500 chr7D 95.114 307 15 0 4767 5073 232450383 232450689 7.640000e-133 484
2 TraesCS7D01G148500 chr3D 98.437 4797 42 7 1 4768 512069225 512064433 0.000000e+00 8412
3 TraesCS7D01G148500 chr3D 84.520 1376 167 25 3404 4754 584411195 584412549 0.000000e+00 1319
4 TraesCS7D01G148500 chr3D 95.192 312 15 0 4767 5078 439108794 439109105 1.270000e-135 494
5 TraesCS7D01G148500 chr6D 99.218 4476 31 4 1 4474 44190982 44195455 0.000000e+00 8069
6 TraesCS7D01G148500 chr6D 99.399 333 2 0 4437 4769 44195451 44195783 5.620000e-169 604
7 TraesCS7D01G148500 chr6D 94.551 312 17 0 4767 5078 218731589 218731900 2.750000e-132 483
8 TraesCS7D01G148500 chr6D 94.231 312 18 0 4767 5078 454416096 454415785 1.280000e-130 477
9 TraesCS7D01G148500 chr3B 95.375 4800 182 26 1 4769 632530998 632535788 0.000000e+00 7598
10 TraesCS7D01G148500 chr3B 91.102 1933 150 16 2556 4472 219744775 219742849 0.000000e+00 2597
11 TraesCS7D01G148500 chr3B 89.983 1787 143 15 2701 4472 218217575 218215810 0.000000e+00 2276
12 TraesCS7D01G148500 chr3B 91.393 1615 116 13 1 1605 219746376 219744775 0.000000e+00 2191
13 TraesCS7D01G148500 chr3B 91.146 1615 120 12 1 1605 218219346 218217745 0.000000e+00 2169
14 TraesCS7D01G148500 chr3B 91.146 1615 120 12 1 1605 218225470 218223869 0.000000e+00 2169
15 TraesCS7D01G148500 chr3B 91.078 1614 119 14 1 1605 58469660 58471257 0.000000e+00 2159
16 TraesCS7D01G148500 chr3B 91.667 336 25 1 4437 4769 58473163 58473498 3.580000e-126 462
17 TraesCS7D01G148500 chr3B 90.801 337 25 4 4437 4768 218215797 218215462 3.610000e-121 446
18 TraesCS7D01G148500 chr3B 90.208 337 27 4 4437 4768 219742794 219742459 7.810000e-118 435
19 TraesCS7D01G148500 chr4B 92.810 2712 156 17 2077 4768 155103143 155105835 0.000000e+00 3892
20 TraesCS7D01G148500 chr4B 94.267 2093 110 9 1 2091 155094357 155096441 0.000000e+00 3192
21 TraesCS7D01G148500 chr1A 86.560 2738 293 53 2079 4768 293124077 293126787 0.000000e+00 2948
22 TraesCS7D01G148500 chr7B 86.208 2748 299 49 2079 4768 684525880 684528605 0.000000e+00 2902
23 TraesCS7D01G148500 chr7A 90.295 2236 152 31 2556 4768 169765806 169767999 0.000000e+00 2867
24 TraesCS7D01G148500 chr7A 91.347 1618 110 16 2 1605 169764205 169765806 0.000000e+00 2185
25 TraesCS7D01G148500 chr3A 85.179 2773 307 55 2079 4770 704255859 704258608 0.000000e+00 2748
26 TraesCS7D01G148500 chr3A 90.408 1595 104 20 2556 4142 651434877 651433324 0.000000e+00 2052
27 TraesCS7D01G148500 chr1B 90.644 2020 143 21 2792 4769 311315602 311317617 0.000000e+00 2641
28 TraesCS7D01G148500 chr1B 90.323 589 52 5 1415 2002 296532714 296533298 0.000000e+00 767
29 TraesCS7D01G148500 chr5B 86.785 2376 262 34 2079 4419 271207902 271205544 0.000000e+00 2601
30 TraesCS7D01G148500 chr4D 97.779 1441 32 0 2527 3967 500382329 500380889 0.000000e+00 2484
31 TraesCS7D01G148500 chr4D 94.231 312 18 0 4767 5078 130976428 130976739 1.280000e-130 477
32 TraesCS7D01G148500 chr6B 89.813 589 55 5 1415 2002 31701786 31702370 0.000000e+00 750
33 TraesCS7D01G148500 chr5D 94.551 312 17 0 4767 5078 175502703 175502392 2.750000e-132 483
34 TraesCS7D01G148500 chr5D 94.231 312 18 0 4767 5078 444292641 444292952 1.280000e-130 477
35 TraesCS7D01G148500 chr1D 94.551 312 17 0 4767 5078 124956260 124955949 2.750000e-132 483
36 TraesCS7D01G148500 chr1D 94.586 314 14 3 4767 5078 205686284 205686596 2.750000e-132 483
37 TraesCS7D01G148500 chr2A 79.638 221 42 3 1597 1815 593824116 593824335 6.810000e-34 156


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G148500 chr7D 95221919 95226996 5077 True 9378.000000 9378 100.000000 1 5078 1 chr7D.!!$R1 5077
1 TraesCS7D01G148500 chr3D 512064433 512069225 4792 True 8412.000000 8412 98.437000 1 4768 1 chr3D.!!$R1 4767
2 TraesCS7D01G148500 chr3D 584411195 584412549 1354 False 1319.000000 1319 84.520000 3404 4754 1 chr3D.!!$F2 1350
3 TraesCS7D01G148500 chr6D 44190982 44195783 4801 False 4336.500000 8069 99.308500 1 4769 2 chr6D.!!$F2 4768
4 TraesCS7D01G148500 chr3B 632530998 632535788 4790 False 7598.000000 7598 95.375000 1 4769 1 chr3B.!!$F1 4768
5 TraesCS7D01G148500 chr3B 218223869 218225470 1601 True 2169.000000 2169 91.146000 1 1605 1 chr3B.!!$R1 1604
6 TraesCS7D01G148500 chr3B 219742459 219746376 3917 True 1741.000000 2597 90.901000 1 4768 3 chr3B.!!$R3 4767
7 TraesCS7D01G148500 chr3B 218215462 218219346 3884 True 1630.333333 2276 90.643333 1 4768 3 chr3B.!!$R2 4767
8 TraesCS7D01G148500 chr3B 58469660 58473498 3838 False 1310.500000 2159 91.372500 1 4769 2 chr3B.!!$F2 4768
9 TraesCS7D01G148500 chr4B 155103143 155105835 2692 False 3892.000000 3892 92.810000 2077 4768 1 chr4B.!!$F2 2691
10 TraesCS7D01G148500 chr4B 155094357 155096441 2084 False 3192.000000 3192 94.267000 1 2091 1 chr4B.!!$F1 2090
11 TraesCS7D01G148500 chr1A 293124077 293126787 2710 False 2948.000000 2948 86.560000 2079 4768 1 chr1A.!!$F1 2689
12 TraesCS7D01G148500 chr7B 684525880 684528605 2725 False 2902.000000 2902 86.208000 2079 4768 1 chr7B.!!$F1 2689
13 TraesCS7D01G148500 chr7A 169764205 169767999 3794 False 2526.000000 2867 90.821000 2 4768 2 chr7A.!!$F1 4766
14 TraesCS7D01G148500 chr3A 704255859 704258608 2749 False 2748.000000 2748 85.179000 2079 4770 1 chr3A.!!$F1 2691
15 TraesCS7D01G148500 chr3A 651433324 651434877 1553 True 2052.000000 2052 90.408000 2556 4142 1 chr3A.!!$R1 1586
16 TraesCS7D01G148500 chr1B 311315602 311317617 2015 False 2641.000000 2641 90.644000 2792 4769 1 chr1B.!!$F2 1977
17 TraesCS7D01G148500 chr1B 296532714 296533298 584 False 767.000000 767 90.323000 1415 2002 1 chr1B.!!$F1 587
18 TraesCS7D01G148500 chr5B 271205544 271207902 2358 True 2601.000000 2601 86.785000 2079 4419 1 chr5B.!!$R1 2340
19 TraesCS7D01G148500 chr4D 500380889 500382329 1440 True 2484.000000 2484 97.779000 2527 3967 1 chr4D.!!$R1 1440
20 TraesCS7D01G148500 chr6B 31701786 31702370 584 False 750.000000 750 89.813000 1415 2002 1 chr6B.!!$F1 587

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
303 307 2.568546 TGGGGAGCCTTCAGATAGAA 57.431 50.000 0.00 0.00 34.41 2.10 F
403 407 4.006319 CCTTGGTGACTTCAATCTCTTCC 58.994 47.826 0.00 0.00 0.00 3.46 F
1412 1436 3.258722 TCTTGGGGATTTTCTTGGCTT 57.741 42.857 0.00 0.00 0.00 4.35 F
2336 2362 1.457346 GGTGGAAAGACTGCATGGAG 58.543 55.000 13.34 13.34 0.00 3.86 F
2877 2991 7.262048 GTTGATGGACTCCAACTTGTTAAAAA 58.738 34.615 0.66 0.00 39.47 1.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1412 1436 5.125900 CACAATGATCCATTCCTTGCAACTA 59.874 40.000 0.00 0.0 34.39 2.24 R
2336 2362 2.808543 ACTTTGTTCAACGCATCTCCTC 59.191 45.455 0.00 0.0 0.00 3.71 R
3350 3474 5.506815 CGACCAGTACATACATAACCATCGT 60.507 44.000 0.00 0.0 0.00 3.73 R
3439 3563 7.410800 TTGTTTGCAGCAGAATTTTTATCTG 57.589 32.000 0.00 0.0 45.65 2.90 R
4775 5166 0.036732 CTAGGCACTTGTGGGAGCAA 59.963 55.000 2.81 0.0 41.75 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
303 307 2.568546 TGGGGAGCCTTCAGATAGAA 57.431 50.000 0.00 0.00 34.41 2.10
403 407 4.006319 CCTTGGTGACTTCAATCTCTTCC 58.994 47.826 0.00 0.00 0.00 3.46
1006 1024 4.895224 AATGTTGCAGCAGATATGTCAG 57.105 40.909 9.71 0.00 0.00 3.51
1164 1182 4.081972 ACAGATTGTGATGACGCTAGAGTT 60.082 41.667 0.00 0.00 0.00 3.01
1412 1436 3.258722 TCTTGGGGATTTTCTTGGCTT 57.741 42.857 0.00 0.00 0.00 4.35
2174 2198 8.790674 CAAAAACTTGCAAGAACAAAATCATTG 58.209 29.630 32.50 15.92 0.00 2.82
2336 2362 1.457346 GGTGGAAAGACTGCATGGAG 58.543 55.000 13.34 13.34 0.00 3.86
2877 2991 7.262048 GTTGATGGACTCCAACTTGTTAAAAA 58.738 34.615 0.66 0.00 39.47 1.94
3439 3563 1.128692 GAATGTTAGTGCACGTCAGGC 59.871 52.381 12.01 4.98 0.00 4.85
4036 4247 6.038714 TGTCAATGCATTGTGTGTTAACAGTA 59.961 34.615 32.67 11.19 36.84 2.74
4602 4993 4.817517 AGTCCCGTTTATCTGTTGTAGTG 58.182 43.478 0.00 0.00 0.00 2.74
4770 5161 2.498481 CGGGGGTCTTGTTGTAGTGATA 59.502 50.000 0.00 0.00 0.00 2.15
4771 5162 3.430374 CGGGGGTCTTGTTGTAGTGATAG 60.430 52.174 0.00 0.00 0.00 2.08
4772 5163 3.532542 GGGGTCTTGTTGTAGTGATAGC 58.467 50.000 0.00 0.00 0.00 2.97
4773 5164 3.055385 GGGGTCTTGTTGTAGTGATAGCA 60.055 47.826 0.00 0.00 0.00 3.49
4774 5165 4.564821 GGGGTCTTGTTGTAGTGATAGCAA 60.565 45.833 0.00 0.00 0.00 3.91
4775 5166 5.186198 GGGTCTTGTTGTAGTGATAGCAAT 58.814 41.667 0.00 0.00 0.00 3.56
4776 5167 5.648092 GGGTCTTGTTGTAGTGATAGCAATT 59.352 40.000 0.00 0.00 0.00 2.32
4777 5168 6.403636 GGGTCTTGTTGTAGTGATAGCAATTG 60.404 42.308 0.00 0.00 0.00 2.32
4778 5169 6.024049 GTCTTGTTGTAGTGATAGCAATTGC 58.976 40.000 23.05 23.05 42.49 3.56
4789 5180 3.502237 GCAATTGCTCCCACAAGTG 57.498 52.632 23.21 0.72 45.74 3.16
4790 5181 3.502237 CAATTGCTCCCACAAGTGC 57.498 52.632 0.00 0.00 38.58 4.40
4791 5182 0.037975 CAATTGCTCCCACAAGTGCC 60.038 55.000 0.00 0.00 38.58 5.01
4792 5183 0.178953 AATTGCTCCCACAAGTGCCT 60.179 50.000 0.00 0.00 31.96 4.75
4793 5184 0.698238 ATTGCTCCCACAAGTGCCTA 59.302 50.000 0.00 0.00 31.96 3.93
4794 5185 0.036732 TTGCTCCCACAAGTGCCTAG 59.963 55.000 0.00 0.00 0.00 3.02
4795 5186 0.835971 TGCTCCCACAAGTGCCTAGA 60.836 55.000 0.00 0.00 0.00 2.43
4796 5187 0.107945 GCTCCCACAAGTGCCTAGAG 60.108 60.000 0.00 0.06 0.00 2.43
4797 5188 1.561643 CTCCCACAAGTGCCTAGAGA 58.438 55.000 0.00 0.00 0.00 3.10
4798 5189 1.205893 CTCCCACAAGTGCCTAGAGAC 59.794 57.143 0.00 0.00 0.00 3.36
4799 5190 1.203187 TCCCACAAGTGCCTAGAGACT 60.203 52.381 0.00 0.00 0.00 3.24
4800 5191 2.042569 TCCCACAAGTGCCTAGAGACTA 59.957 50.000 0.00 0.00 0.00 2.59
4801 5192 3.034635 CCCACAAGTGCCTAGAGACTAT 58.965 50.000 0.00 0.00 0.00 2.12
4802 5193 4.079385 TCCCACAAGTGCCTAGAGACTATA 60.079 45.833 0.00 0.00 0.00 1.31
4803 5194 4.835615 CCCACAAGTGCCTAGAGACTATAT 59.164 45.833 0.00 0.00 0.00 0.86
4804 5195 5.047660 CCCACAAGTGCCTAGAGACTATATC 60.048 48.000 0.00 0.00 0.00 1.63
4805 5196 5.536538 CCACAAGTGCCTAGAGACTATATCA 59.463 44.000 0.00 0.00 0.00 2.15
4806 5197 6.210385 CCACAAGTGCCTAGAGACTATATCAT 59.790 42.308 0.00 0.00 0.00 2.45
4807 5198 7.089538 CACAAGTGCCTAGAGACTATATCATG 58.910 42.308 0.00 0.00 0.00 3.07
4808 5199 5.913137 AGTGCCTAGAGACTATATCATGC 57.087 43.478 0.00 0.00 0.00 4.06
4809 5200 5.328565 AGTGCCTAGAGACTATATCATGCA 58.671 41.667 0.00 0.00 0.00 3.96
4810 5201 5.957168 AGTGCCTAGAGACTATATCATGCAT 59.043 40.000 0.00 0.00 0.00 3.96
4811 5202 6.440010 AGTGCCTAGAGACTATATCATGCATT 59.560 38.462 0.00 0.00 0.00 3.56
4812 5203 7.617329 AGTGCCTAGAGACTATATCATGCATTA 59.383 37.037 0.00 0.00 0.00 1.90
4813 5204 7.920151 GTGCCTAGAGACTATATCATGCATTAG 59.080 40.741 0.00 0.00 0.00 1.73
4814 5205 7.836183 TGCCTAGAGACTATATCATGCATTAGA 59.164 37.037 9.59 0.00 0.00 2.10
4815 5206 8.690884 GCCTAGAGACTATATCATGCATTAGAA 58.309 37.037 9.59 0.00 0.00 2.10
4819 5210 8.034215 AGAGACTATATCATGCATTAGAACAGC 58.966 37.037 9.59 0.00 0.00 4.40
4820 5211 7.905265 AGACTATATCATGCATTAGAACAGCT 58.095 34.615 9.59 0.00 0.00 4.24
4821 5212 8.373981 AGACTATATCATGCATTAGAACAGCTT 58.626 33.333 9.59 0.00 0.00 3.74
4822 5213 8.320396 ACTATATCATGCATTAGAACAGCTTG 57.680 34.615 9.59 0.00 35.49 4.01
4823 5214 4.913335 ATCATGCATTAGAACAGCTTGG 57.087 40.909 0.00 0.00 35.08 3.61
4824 5215 3.018856 TCATGCATTAGAACAGCTTGGG 58.981 45.455 0.00 0.00 35.08 4.12
4825 5216 2.877097 TGCATTAGAACAGCTTGGGA 57.123 45.000 0.00 0.00 0.00 4.37
4826 5217 2.436417 TGCATTAGAACAGCTTGGGAC 58.564 47.619 0.00 0.00 0.00 4.46
4827 5218 1.745653 GCATTAGAACAGCTTGGGACC 59.254 52.381 0.00 0.00 0.00 4.46
4828 5219 2.879756 GCATTAGAACAGCTTGGGACCA 60.880 50.000 0.00 0.00 0.00 4.02
4829 5220 3.624777 CATTAGAACAGCTTGGGACCAT 58.375 45.455 0.00 0.00 0.00 3.55
4830 5221 4.780815 CATTAGAACAGCTTGGGACCATA 58.219 43.478 0.00 0.00 0.00 2.74
4831 5222 5.380043 CATTAGAACAGCTTGGGACCATAT 58.620 41.667 0.00 0.00 0.00 1.78
4832 5223 6.533730 CATTAGAACAGCTTGGGACCATATA 58.466 40.000 0.00 0.00 0.00 0.86
4833 5224 6.569127 TTAGAACAGCTTGGGACCATATAA 57.431 37.500 0.00 0.00 0.00 0.98
4834 5225 5.450818 AGAACAGCTTGGGACCATATAAA 57.549 39.130 0.00 0.00 0.00 1.40
4835 5226 6.018433 AGAACAGCTTGGGACCATATAAAT 57.982 37.500 0.00 0.00 0.00 1.40
4836 5227 6.435164 AGAACAGCTTGGGACCATATAAATT 58.565 36.000 0.00 0.00 0.00 1.82
4837 5228 6.897413 AGAACAGCTTGGGACCATATAAATTT 59.103 34.615 0.00 0.00 0.00 1.82
4838 5229 6.469782 ACAGCTTGGGACCATATAAATTTG 57.530 37.500 0.00 0.00 0.00 2.32
4839 5230 6.194235 ACAGCTTGGGACCATATAAATTTGA 58.806 36.000 0.00 0.00 0.00 2.69
4840 5231 6.096846 ACAGCTTGGGACCATATAAATTTGAC 59.903 38.462 0.00 0.00 0.00 3.18
4841 5232 6.096705 CAGCTTGGGACCATATAAATTTGACA 59.903 38.462 0.00 0.00 0.00 3.58
4842 5233 6.840705 AGCTTGGGACCATATAAATTTGACAT 59.159 34.615 0.00 0.00 0.00 3.06
4843 5234 6.925165 GCTTGGGACCATATAAATTTGACATG 59.075 38.462 0.00 0.00 0.00 3.21
4844 5235 6.403866 TGGGACCATATAAATTTGACATGC 57.596 37.500 0.00 0.00 0.00 4.06
4845 5236 5.896106 TGGGACCATATAAATTTGACATGCA 59.104 36.000 0.00 0.00 0.00 3.96
4846 5237 6.382282 TGGGACCATATAAATTTGACATGCAA 59.618 34.615 0.00 0.00 33.88 4.08
4847 5238 6.925165 GGGACCATATAAATTTGACATGCAAG 59.075 38.462 0.00 0.00 37.87 4.01
4848 5239 7.201902 GGGACCATATAAATTTGACATGCAAGA 60.202 37.037 0.00 0.00 37.87 3.02
4849 5240 8.362639 GGACCATATAAATTTGACATGCAAGAT 58.637 33.333 0.00 0.00 37.87 2.40
4850 5241 9.403110 GACCATATAAATTTGACATGCAAGATC 57.597 33.333 0.00 0.00 37.87 2.75
4851 5242 8.916062 ACCATATAAATTTGACATGCAAGATCA 58.084 29.630 0.00 0.00 37.87 2.92
4852 5243 9.752961 CCATATAAATTTGACATGCAAGATCAA 57.247 29.630 0.00 1.01 37.87 2.57
4856 5247 7.647907 AAATTTGACATGCAAGATCAAGAAC 57.352 32.000 9.69 0.00 37.87 3.01
4857 5248 5.771153 TTTGACATGCAAGATCAAGAACA 57.229 34.783 9.69 0.00 37.87 3.18
4858 5249 5.366829 TTGACATGCAAGATCAAGAACAG 57.633 39.130 0.00 0.00 31.55 3.16
4859 5250 3.754850 TGACATGCAAGATCAAGAACAGG 59.245 43.478 0.00 0.00 0.00 4.00
4860 5251 3.087031 ACATGCAAGATCAAGAACAGGG 58.913 45.455 0.00 0.00 0.00 4.45
4861 5252 2.957402 TGCAAGATCAAGAACAGGGT 57.043 45.000 0.00 0.00 0.00 4.34
4862 5253 2.783135 TGCAAGATCAAGAACAGGGTC 58.217 47.619 0.00 0.00 0.00 4.46
4863 5254 2.106338 TGCAAGATCAAGAACAGGGTCA 59.894 45.455 0.00 0.00 0.00 4.02
4864 5255 2.485814 GCAAGATCAAGAACAGGGTCAC 59.514 50.000 0.00 0.00 0.00 3.67
4865 5256 3.077359 CAAGATCAAGAACAGGGTCACC 58.923 50.000 0.00 0.00 0.00 4.02
4876 5267 3.339547 GGGTCACCTAAGCAGCAAA 57.660 52.632 0.00 0.00 0.00 3.68
4877 5268 1.616159 GGGTCACCTAAGCAGCAAAA 58.384 50.000 0.00 0.00 0.00 2.44
4878 5269 1.960689 GGGTCACCTAAGCAGCAAAAA 59.039 47.619 0.00 0.00 0.00 1.94
4879 5270 2.562738 GGGTCACCTAAGCAGCAAAAAT 59.437 45.455 0.00 0.00 0.00 1.82
4880 5271 3.006859 GGGTCACCTAAGCAGCAAAAATT 59.993 43.478 0.00 0.00 0.00 1.82
4881 5272 4.503123 GGGTCACCTAAGCAGCAAAAATTT 60.503 41.667 0.00 0.00 0.00 1.82
4882 5273 4.448732 GGTCACCTAAGCAGCAAAAATTTG 59.551 41.667 0.00 1.52 41.03 2.32
4903 5294 9.626045 AATTTGCAATAAGTAAAGCACTAGAAC 57.374 29.630 0.00 0.00 36.04 3.01
4904 5295 7.737972 TTGCAATAAGTAAAGCACTAGAACA 57.262 32.000 0.00 0.00 36.04 3.18
4905 5296 7.737972 TGCAATAAGTAAAGCACTAGAACAA 57.262 32.000 0.00 0.00 36.04 2.83
4906 5297 8.160521 TGCAATAAGTAAAGCACTAGAACAAA 57.839 30.769 0.00 0.00 36.04 2.83
4907 5298 8.625651 TGCAATAAGTAAAGCACTAGAACAAAA 58.374 29.630 0.00 0.00 36.04 2.44
4908 5299 9.458374 GCAATAAGTAAAGCACTAGAACAAAAA 57.542 29.630 0.00 0.00 36.04 1.94
4916 5307 8.871686 AAAGCACTAGAACAAAAACTAATTGG 57.128 30.769 0.00 0.00 32.02 3.16
4917 5308 7.817418 AGCACTAGAACAAAAACTAATTGGA 57.183 32.000 0.00 0.00 32.02 3.53
4918 5309 7.649057 AGCACTAGAACAAAAACTAATTGGAC 58.351 34.615 0.00 0.00 32.02 4.02
4919 5310 6.861572 GCACTAGAACAAAAACTAATTGGACC 59.138 38.462 0.00 0.00 32.02 4.46
4920 5311 7.469456 GCACTAGAACAAAAACTAATTGGACCA 60.469 37.037 0.00 0.00 32.02 4.02
4921 5312 8.576442 CACTAGAACAAAAACTAATTGGACCAT 58.424 33.333 0.00 0.00 32.02 3.55
4922 5313 9.143155 ACTAGAACAAAAACTAATTGGACCATT 57.857 29.630 0.00 0.00 32.02 3.16
4923 5314 9.410556 CTAGAACAAAAACTAATTGGACCATTG 57.589 33.333 0.00 0.00 32.02 2.82
4924 5315 7.216494 AGAACAAAAACTAATTGGACCATTGG 58.784 34.615 0.00 0.00 32.02 3.16
4925 5316 6.739331 ACAAAAACTAATTGGACCATTGGA 57.261 33.333 10.37 0.00 32.02 3.53
4926 5317 6.758254 ACAAAAACTAATTGGACCATTGGAG 58.242 36.000 10.37 0.00 32.02 3.86
4927 5318 6.165577 CAAAAACTAATTGGACCATTGGAGG 58.834 40.000 10.37 0.00 0.00 4.30
4928 5319 4.946160 AACTAATTGGACCATTGGAGGA 57.054 40.909 10.37 0.00 0.00 3.71
4929 5320 4.510167 ACTAATTGGACCATTGGAGGAG 57.490 45.455 10.37 0.00 0.00 3.69
4930 5321 3.852578 ACTAATTGGACCATTGGAGGAGT 59.147 43.478 10.37 0.13 0.00 3.85
4931 5322 3.372440 AATTGGACCATTGGAGGAGTC 57.628 47.619 10.37 0.00 0.00 3.36
4932 5323 1.741028 TTGGACCATTGGAGGAGTCA 58.259 50.000 10.37 0.00 0.00 3.41
4933 5324 0.984230 TGGACCATTGGAGGAGTCAC 59.016 55.000 10.37 0.00 0.00 3.67
4934 5325 0.984230 GGACCATTGGAGGAGTCACA 59.016 55.000 10.37 0.00 0.00 3.58
4935 5326 1.561542 GGACCATTGGAGGAGTCACAT 59.438 52.381 10.37 0.00 0.00 3.21
4936 5327 2.771943 GGACCATTGGAGGAGTCACATA 59.228 50.000 10.37 0.00 0.00 2.29
4937 5328 3.432326 GGACCATTGGAGGAGTCACATAC 60.432 52.174 10.37 0.00 0.00 2.39
4938 5329 2.505819 ACCATTGGAGGAGTCACATACC 59.494 50.000 10.37 0.00 0.00 2.73
4939 5330 2.483714 CCATTGGAGGAGTCACATACCG 60.484 54.545 0.00 0.00 0.00 4.02
4940 5331 2.225382 TTGGAGGAGTCACATACCGA 57.775 50.000 0.00 0.00 0.00 4.69
4941 5332 2.225382 TGGAGGAGTCACATACCGAA 57.775 50.000 0.00 0.00 0.00 4.30
4942 5333 2.100197 TGGAGGAGTCACATACCGAAG 58.900 52.381 0.00 0.00 0.00 3.79
4943 5334 2.291346 TGGAGGAGTCACATACCGAAGA 60.291 50.000 0.00 0.00 0.00 2.87
4944 5335 2.758979 GGAGGAGTCACATACCGAAGAA 59.241 50.000 0.00 0.00 0.00 2.52
4945 5336 3.429135 GGAGGAGTCACATACCGAAGAAC 60.429 52.174 0.00 0.00 0.00 3.01
4946 5337 3.162666 AGGAGTCACATACCGAAGAACA 58.837 45.455 0.00 0.00 0.00 3.18
4947 5338 3.576982 AGGAGTCACATACCGAAGAACAA 59.423 43.478 0.00 0.00 0.00 2.83
4948 5339 4.223032 AGGAGTCACATACCGAAGAACAAT 59.777 41.667 0.00 0.00 0.00 2.71
4949 5340 4.330074 GGAGTCACATACCGAAGAACAATG 59.670 45.833 0.00 0.00 0.00 2.82
4950 5341 3.684788 AGTCACATACCGAAGAACAATGC 59.315 43.478 0.00 0.00 0.00 3.56
4951 5342 3.006940 TCACATACCGAAGAACAATGCC 58.993 45.455 0.00 0.00 0.00 4.40
4952 5343 2.097466 CACATACCGAAGAACAATGCCC 59.903 50.000 0.00 0.00 0.00 5.36
4953 5344 1.676006 CATACCGAAGAACAATGCCCC 59.324 52.381 0.00 0.00 0.00 5.80
4954 5345 0.693622 TACCGAAGAACAATGCCCCA 59.306 50.000 0.00 0.00 0.00 4.96
4955 5346 0.178975 ACCGAAGAACAATGCCCCAA 60.179 50.000 0.00 0.00 0.00 4.12
4956 5347 0.965439 CCGAAGAACAATGCCCCAAA 59.035 50.000 0.00 0.00 0.00 3.28
4957 5348 1.067635 CCGAAGAACAATGCCCCAAAG 60.068 52.381 0.00 0.00 0.00 2.77
4958 5349 1.669795 CGAAGAACAATGCCCCAAAGC 60.670 52.381 0.00 0.00 0.00 3.51
4966 5357 3.776616 TGCCCCAAAGCAGTTTTTG 57.223 47.368 0.00 0.00 38.00 2.44
4973 5364 3.799281 CAAAGCAGTTTTTGGAGTGGA 57.201 42.857 0.00 0.00 35.03 4.02
4974 5365 3.709987 CAAAGCAGTTTTTGGAGTGGAG 58.290 45.455 0.00 0.00 35.03 3.86
4975 5366 1.322442 AGCAGTTTTTGGAGTGGAGC 58.678 50.000 0.00 0.00 0.00 4.70
4976 5367 1.133668 AGCAGTTTTTGGAGTGGAGCT 60.134 47.619 0.00 0.00 0.00 4.09
4977 5368 1.683385 GCAGTTTTTGGAGTGGAGCTT 59.317 47.619 0.00 0.00 0.00 3.74
4978 5369 2.101415 GCAGTTTTTGGAGTGGAGCTTT 59.899 45.455 0.00 0.00 0.00 3.51
4979 5370 3.709987 CAGTTTTTGGAGTGGAGCTTTG 58.290 45.455 0.00 0.00 0.00 2.77
4980 5371 3.381272 CAGTTTTTGGAGTGGAGCTTTGA 59.619 43.478 0.00 0.00 0.00 2.69
4981 5372 3.633986 AGTTTTTGGAGTGGAGCTTTGAG 59.366 43.478 0.00 0.00 0.00 3.02
4982 5373 1.609208 TTTGGAGTGGAGCTTTGAGC 58.391 50.000 0.00 0.00 42.84 4.26
4983 5374 0.473755 TTGGAGTGGAGCTTTGAGCA 59.526 50.000 2.47 0.00 45.56 4.26
4984 5375 0.473755 TGGAGTGGAGCTTTGAGCAA 59.526 50.000 2.47 0.00 45.56 3.91
4985 5376 1.163554 GGAGTGGAGCTTTGAGCAAG 58.836 55.000 2.47 0.00 45.56 4.01
4986 5377 1.163554 GAGTGGAGCTTTGAGCAAGG 58.836 55.000 2.47 0.00 45.56 3.61
4987 5378 0.767375 AGTGGAGCTTTGAGCAAGGA 59.233 50.000 2.47 0.00 45.56 3.36
4988 5379 1.163554 GTGGAGCTTTGAGCAAGGAG 58.836 55.000 2.47 0.00 45.56 3.69
4989 5380 1.059098 TGGAGCTTTGAGCAAGGAGA 58.941 50.000 2.47 0.00 45.56 3.71
4990 5381 1.632409 TGGAGCTTTGAGCAAGGAGAT 59.368 47.619 2.47 0.00 45.56 2.75
4991 5382 2.287769 GGAGCTTTGAGCAAGGAGATC 58.712 52.381 2.47 0.00 45.56 2.75
4992 5383 1.932511 GAGCTTTGAGCAAGGAGATCG 59.067 52.381 2.47 0.00 45.56 3.69
4993 5384 1.552337 AGCTTTGAGCAAGGAGATCGA 59.448 47.619 2.47 0.00 45.56 3.59
4994 5385 2.027745 AGCTTTGAGCAAGGAGATCGAA 60.028 45.455 2.47 0.00 45.56 3.71
4995 5386 2.744202 GCTTTGAGCAAGGAGATCGAAA 59.256 45.455 0.00 0.00 41.89 3.46
4996 5387 3.189287 GCTTTGAGCAAGGAGATCGAAAA 59.811 43.478 0.00 0.00 41.89 2.29
4997 5388 4.142513 GCTTTGAGCAAGGAGATCGAAAAT 60.143 41.667 0.00 0.00 41.89 1.82
4998 5389 4.952262 TTGAGCAAGGAGATCGAAAATG 57.048 40.909 0.00 0.00 34.70 2.32
4999 5390 3.273434 TGAGCAAGGAGATCGAAAATGG 58.727 45.455 0.00 0.00 34.70 3.16
5000 5391 2.019984 AGCAAGGAGATCGAAAATGGC 58.980 47.619 0.00 0.00 0.00 4.40
5001 5392 1.745087 GCAAGGAGATCGAAAATGGCA 59.255 47.619 0.00 0.00 0.00 4.92
5002 5393 2.223433 GCAAGGAGATCGAAAATGGCAG 60.223 50.000 0.00 0.00 0.00 4.85
5003 5394 1.673168 AGGAGATCGAAAATGGCAGC 58.327 50.000 0.00 0.00 0.00 5.25
5004 5395 1.065199 AGGAGATCGAAAATGGCAGCA 60.065 47.619 0.00 0.00 0.00 4.41
5005 5396 1.745087 GGAGATCGAAAATGGCAGCAA 59.255 47.619 0.00 0.00 0.00 3.91
5006 5397 2.223433 GGAGATCGAAAATGGCAGCAAG 60.223 50.000 0.00 0.00 0.00 4.01
5007 5398 2.679837 GAGATCGAAAATGGCAGCAAGA 59.320 45.455 0.00 0.00 0.00 3.02
5008 5399 3.285484 AGATCGAAAATGGCAGCAAGAT 58.715 40.909 0.00 0.00 0.00 2.40
5009 5400 2.925578 TCGAAAATGGCAGCAAGATG 57.074 45.000 0.00 0.00 0.00 2.90
5010 5401 2.435422 TCGAAAATGGCAGCAAGATGA 58.565 42.857 0.00 0.00 0.00 2.92
5011 5402 2.421073 TCGAAAATGGCAGCAAGATGAG 59.579 45.455 0.00 0.00 0.00 2.90
5012 5403 2.537401 GAAAATGGCAGCAAGATGAGC 58.463 47.619 0.00 0.00 0.00 4.26
5013 5404 1.848652 AAATGGCAGCAAGATGAGCT 58.151 45.000 0.00 0.00 44.62 4.09
5014 5405 2.723322 AATGGCAGCAAGATGAGCTA 57.277 45.000 0.00 0.00 41.14 3.32
5015 5406 2.257691 ATGGCAGCAAGATGAGCTAG 57.742 50.000 0.00 0.00 41.14 3.42
5016 5407 1.197812 TGGCAGCAAGATGAGCTAGA 58.802 50.000 0.00 0.00 41.14 2.43
5017 5408 1.556451 TGGCAGCAAGATGAGCTAGAA 59.444 47.619 0.00 0.00 41.14 2.10
5018 5409 1.939255 GGCAGCAAGATGAGCTAGAAC 59.061 52.381 0.00 0.00 41.14 3.01
5019 5410 2.625737 GCAGCAAGATGAGCTAGAACA 58.374 47.619 0.00 0.00 41.14 3.18
5020 5411 2.351111 GCAGCAAGATGAGCTAGAACAC 59.649 50.000 0.00 0.00 41.14 3.32
5021 5412 2.602211 CAGCAAGATGAGCTAGAACACG 59.398 50.000 0.00 0.00 41.14 4.49
5022 5413 1.929836 GCAAGATGAGCTAGAACACGG 59.070 52.381 0.00 0.00 0.00 4.94
5023 5414 2.544685 CAAGATGAGCTAGAACACGGG 58.455 52.381 0.00 0.00 0.00 5.28
5024 5415 1.853963 AGATGAGCTAGAACACGGGT 58.146 50.000 0.00 0.00 0.00 5.28
5025 5416 2.180276 AGATGAGCTAGAACACGGGTT 58.820 47.619 0.56 0.56 40.76 4.11
5026 5417 2.567615 AGATGAGCTAGAACACGGGTTT 59.432 45.455 3.63 0.00 37.36 3.27
5027 5418 2.163818 TGAGCTAGAACACGGGTTTG 57.836 50.000 3.63 0.00 37.36 2.93
5028 5419 1.689813 TGAGCTAGAACACGGGTTTGA 59.310 47.619 3.63 0.00 37.36 2.69
5029 5420 2.288825 TGAGCTAGAACACGGGTTTGAG 60.289 50.000 3.63 6.38 37.36 3.02
5030 5421 0.796927 GCTAGAACACGGGTTTGAGC 59.203 55.000 18.30 18.30 37.36 4.26
5031 5422 1.608283 GCTAGAACACGGGTTTGAGCT 60.608 52.381 23.20 11.46 39.78 4.09
5032 5423 2.353406 GCTAGAACACGGGTTTGAGCTA 60.353 50.000 23.20 11.93 39.78 3.32
5033 5424 3.679083 GCTAGAACACGGGTTTGAGCTAT 60.679 47.826 23.20 0.00 39.78 2.97
5034 5425 2.699954 AGAACACGGGTTTGAGCTATG 58.300 47.619 3.63 0.00 37.36 2.23
5035 5426 1.737793 GAACACGGGTTTGAGCTATGG 59.262 52.381 3.63 0.00 37.36 2.74
5036 5427 0.035439 ACACGGGTTTGAGCTATGGG 60.035 55.000 0.00 0.00 0.00 4.00
5037 5428 0.251916 CACGGGTTTGAGCTATGGGA 59.748 55.000 0.00 0.00 0.00 4.37
5038 5429 0.541863 ACGGGTTTGAGCTATGGGAG 59.458 55.000 0.00 0.00 0.00 4.30
5039 5430 0.179045 CGGGTTTGAGCTATGGGAGG 60.179 60.000 0.00 0.00 0.00 4.30
5040 5431 1.213296 GGGTTTGAGCTATGGGAGGA 58.787 55.000 0.00 0.00 0.00 3.71
5041 5432 1.777272 GGGTTTGAGCTATGGGAGGAT 59.223 52.381 0.00 0.00 0.00 3.24
5042 5433 2.175715 GGGTTTGAGCTATGGGAGGATT 59.824 50.000 0.00 0.00 0.00 3.01
5043 5434 3.373110 GGGTTTGAGCTATGGGAGGATTT 60.373 47.826 0.00 0.00 0.00 2.17
5044 5435 4.281657 GGTTTGAGCTATGGGAGGATTTT 58.718 43.478 0.00 0.00 0.00 1.82
5045 5436 4.711846 GGTTTGAGCTATGGGAGGATTTTT 59.288 41.667 0.00 0.00 0.00 1.94
5062 5453 2.543777 TTTTCTGGAGGGACACGAAG 57.456 50.000 0.00 0.00 0.00 3.79
5076 5467 0.966920 ACGAAGTGAGTGGGTGTAGG 59.033 55.000 0.00 0.00 42.51 3.18
5077 5468 1.254026 CGAAGTGAGTGGGTGTAGGA 58.746 55.000 0.00 0.00 0.00 2.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
303 307 5.418840 CCAATAGTTACCAGAAGCAACCAAT 59.581 40.000 0.00 0.00 0.00 3.16
403 407 8.848474 TTGGAGTTCCATAAAGAAAAGTCTAG 57.152 34.615 0.93 0.00 46.97 2.43
1006 1024 5.427036 TCAACAACGTTAATTCTTGTCCC 57.573 39.130 0.00 0.00 0.00 4.46
1164 1182 7.227711 TCAAACTTACCATCTTCGTTTTCATCA 59.772 33.333 0.00 0.00 0.00 3.07
1412 1436 5.125900 CACAATGATCCATTCCTTGCAACTA 59.874 40.000 0.00 0.00 34.39 2.24
1858 1882 6.865726 GTGCAGATCTTTCATCGTATCTACAT 59.134 38.462 0.00 0.00 27.61 2.29
2174 2198 6.094048 AGTTGTAAATGTACCACATGAGCATC 59.906 38.462 0.00 0.00 37.97 3.91
2336 2362 2.808543 ACTTTGTTCAACGCATCTCCTC 59.191 45.455 0.00 0.00 0.00 3.71
2877 2991 9.341899 GCTTGTTCTGTAAATTATTTGATCGTT 57.658 29.630 0.00 0.00 0.00 3.85
3350 3474 5.506815 CGACCAGTACATACATAACCATCGT 60.507 44.000 0.00 0.00 0.00 3.73
3439 3563 7.410800 TTGTTTGCAGCAGAATTTTTATCTG 57.589 32.000 0.00 0.00 45.65 2.90
4602 4993 3.771798 TGGTAAAAGAAACCGTTGCAAC 58.228 40.909 19.89 19.89 40.08 4.17
4662 5053 4.271687 GTTTAAGATGCGTTGCCTTATCG 58.728 43.478 0.00 0.00 0.00 2.92
4771 5162 0.668401 GCACTTGTGGGAGCAATTGC 60.668 55.000 23.05 23.05 43.85 3.56
4772 5163 0.037975 GGCACTTGTGGGAGCAATTG 60.038 55.000 0.00 0.00 33.80 2.32
4773 5164 0.178953 AGGCACTTGTGGGAGCAATT 60.179 50.000 2.81 0.00 27.25 2.32
4774 5165 0.698238 TAGGCACTTGTGGGAGCAAT 59.302 50.000 2.81 0.00 41.75 3.56
4775 5166 0.036732 CTAGGCACTTGTGGGAGCAA 59.963 55.000 2.81 0.00 41.75 3.91
4776 5167 0.835971 TCTAGGCACTTGTGGGAGCA 60.836 55.000 2.81 0.00 41.75 4.26
4777 5168 0.107945 CTCTAGGCACTTGTGGGAGC 60.108 60.000 2.81 0.00 41.75 4.70
4778 5169 1.205893 GTCTCTAGGCACTTGTGGGAG 59.794 57.143 2.81 0.00 41.75 4.30
4779 5170 1.203187 AGTCTCTAGGCACTTGTGGGA 60.203 52.381 2.81 0.00 41.75 4.37
4780 5171 1.270907 AGTCTCTAGGCACTTGTGGG 58.729 55.000 2.81 0.00 41.75 4.61
4781 5172 5.536538 TGATATAGTCTCTAGGCACTTGTGG 59.463 44.000 2.81 0.00 41.75 4.17
4782 5173 6.641169 TGATATAGTCTCTAGGCACTTGTG 57.359 41.667 0.46 0.00 41.75 3.33
4783 5174 6.295011 GCATGATATAGTCTCTAGGCACTTGT 60.295 42.308 0.00 0.00 41.75 3.16
4784 5175 6.098679 GCATGATATAGTCTCTAGGCACTTG 58.901 44.000 0.00 0.00 41.75 3.16
4785 5176 5.777223 TGCATGATATAGTCTCTAGGCACTT 59.223 40.000 0.00 0.00 41.75 3.16
4786 5177 5.328565 TGCATGATATAGTCTCTAGGCACT 58.671 41.667 0.00 0.00 46.37 4.40
4787 5178 5.651387 TGCATGATATAGTCTCTAGGCAC 57.349 43.478 0.00 0.00 0.00 5.01
4788 5179 6.864151 AATGCATGATATAGTCTCTAGGCA 57.136 37.500 0.00 0.00 0.00 4.75
4789 5180 8.231692 TCTAATGCATGATATAGTCTCTAGGC 57.768 38.462 0.00 0.00 0.00 3.93
4793 5184 8.034215 GCTGTTCTAATGCATGATATAGTCTCT 58.966 37.037 0.00 0.00 0.00 3.10
4794 5185 8.034215 AGCTGTTCTAATGCATGATATAGTCTC 58.966 37.037 0.00 0.00 0.00 3.36
4795 5186 7.905265 AGCTGTTCTAATGCATGATATAGTCT 58.095 34.615 0.00 0.00 0.00 3.24
4796 5187 8.441608 CAAGCTGTTCTAATGCATGATATAGTC 58.558 37.037 0.00 0.00 0.00 2.59
4797 5188 7.389884 CCAAGCTGTTCTAATGCATGATATAGT 59.610 37.037 0.00 0.00 0.00 2.12
4798 5189 7.148289 CCCAAGCTGTTCTAATGCATGATATAG 60.148 40.741 0.00 0.00 0.00 1.31
4799 5190 6.656270 CCCAAGCTGTTCTAATGCATGATATA 59.344 38.462 0.00 0.00 0.00 0.86
4800 5191 5.475909 CCCAAGCTGTTCTAATGCATGATAT 59.524 40.000 0.00 0.00 0.00 1.63
4801 5192 4.823442 CCCAAGCTGTTCTAATGCATGATA 59.177 41.667 0.00 0.00 0.00 2.15
4802 5193 3.635373 CCCAAGCTGTTCTAATGCATGAT 59.365 43.478 0.00 0.00 0.00 2.45
4803 5194 3.018856 CCCAAGCTGTTCTAATGCATGA 58.981 45.455 0.00 0.00 0.00 3.07
4804 5195 3.018856 TCCCAAGCTGTTCTAATGCATG 58.981 45.455 0.00 0.00 0.00 4.06
4805 5196 3.019564 GTCCCAAGCTGTTCTAATGCAT 58.980 45.455 0.00 0.00 0.00 3.96
4806 5197 2.436417 GTCCCAAGCTGTTCTAATGCA 58.564 47.619 0.00 0.00 0.00 3.96
4807 5198 1.745653 GGTCCCAAGCTGTTCTAATGC 59.254 52.381 0.00 0.00 0.00 3.56
4808 5199 3.071874 TGGTCCCAAGCTGTTCTAATG 57.928 47.619 0.00 0.00 0.00 1.90
4809 5200 5.653255 ATATGGTCCCAAGCTGTTCTAAT 57.347 39.130 0.00 0.00 0.00 1.73
4810 5201 6.569127 TTATATGGTCCCAAGCTGTTCTAA 57.431 37.500 0.00 0.00 0.00 2.10
4811 5202 6.569127 TTTATATGGTCCCAAGCTGTTCTA 57.431 37.500 0.00 0.00 0.00 2.10
4812 5203 5.450818 TTTATATGGTCCCAAGCTGTTCT 57.549 39.130 0.00 0.00 0.00 3.01
4813 5204 6.715347 AATTTATATGGTCCCAAGCTGTTC 57.285 37.500 0.00 0.00 0.00 3.18
4814 5205 6.667414 TCAAATTTATATGGTCCCAAGCTGTT 59.333 34.615 0.00 0.00 0.00 3.16
4815 5206 6.096846 GTCAAATTTATATGGTCCCAAGCTGT 59.903 38.462 0.00 0.00 0.00 4.40
4816 5207 6.096705 TGTCAAATTTATATGGTCCCAAGCTG 59.903 38.462 0.00 0.00 0.00 4.24
4817 5208 6.194235 TGTCAAATTTATATGGTCCCAAGCT 58.806 36.000 0.00 0.00 0.00 3.74
4818 5209 6.463995 TGTCAAATTTATATGGTCCCAAGC 57.536 37.500 0.00 0.00 0.00 4.01
4819 5210 6.925165 GCATGTCAAATTTATATGGTCCCAAG 59.075 38.462 0.00 0.00 0.00 3.61
4820 5211 6.382282 TGCATGTCAAATTTATATGGTCCCAA 59.618 34.615 0.00 0.00 0.00 4.12
4821 5212 5.896106 TGCATGTCAAATTTATATGGTCCCA 59.104 36.000 0.00 0.00 0.00 4.37
4822 5213 6.403866 TGCATGTCAAATTTATATGGTCCC 57.596 37.500 0.00 0.00 0.00 4.46
4823 5214 7.715657 TCTTGCATGTCAAATTTATATGGTCC 58.284 34.615 0.00 0.00 33.65 4.46
4824 5215 9.403110 GATCTTGCATGTCAAATTTATATGGTC 57.597 33.333 0.00 0.00 33.65 4.02
4825 5216 8.916062 TGATCTTGCATGTCAAATTTATATGGT 58.084 29.630 0.00 0.00 33.65 3.55
4826 5217 9.752961 TTGATCTTGCATGTCAAATTTATATGG 57.247 29.630 12.10 0.00 33.65 2.74
4830 5221 9.362539 GTTCTTGATCTTGCATGTCAAATTTAT 57.637 29.630 14.10 0.00 33.65 1.40
4831 5222 8.358895 TGTTCTTGATCTTGCATGTCAAATTTA 58.641 29.630 14.10 4.69 33.65 1.40
4832 5223 7.211573 TGTTCTTGATCTTGCATGTCAAATTT 58.788 30.769 14.10 0.00 33.65 1.82
4833 5224 6.751157 TGTTCTTGATCTTGCATGTCAAATT 58.249 32.000 14.10 0.00 33.65 1.82
4834 5225 6.335471 TGTTCTTGATCTTGCATGTCAAAT 57.665 33.333 14.10 0.00 33.65 2.32
4835 5226 5.278610 CCTGTTCTTGATCTTGCATGTCAAA 60.279 40.000 14.10 7.05 33.65 2.69
4836 5227 4.216902 CCTGTTCTTGATCTTGCATGTCAA 59.783 41.667 13.15 13.15 0.00 3.18
4837 5228 3.754850 CCTGTTCTTGATCTTGCATGTCA 59.245 43.478 0.00 0.89 0.00 3.58
4838 5229 3.128242 CCCTGTTCTTGATCTTGCATGTC 59.872 47.826 0.00 0.00 0.00 3.06
4839 5230 3.087031 CCCTGTTCTTGATCTTGCATGT 58.913 45.455 0.00 0.00 0.00 3.21
4840 5231 3.087031 ACCCTGTTCTTGATCTTGCATG 58.913 45.455 0.00 0.00 0.00 4.06
4841 5232 3.245016 TGACCCTGTTCTTGATCTTGCAT 60.245 43.478 0.00 0.00 0.00 3.96
4842 5233 2.106338 TGACCCTGTTCTTGATCTTGCA 59.894 45.455 0.00 0.00 0.00 4.08
4843 5234 2.485814 GTGACCCTGTTCTTGATCTTGC 59.514 50.000 0.00 0.00 0.00 4.01
4844 5235 3.077359 GGTGACCCTGTTCTTGATCTTG 58.923 50.000 0.00 0.00 0.00 3.02
4845 5236 2.982488 AGGTGACCCTGTTCTTGATCTT 59.018 45.455 0.00 0.00 40.58 2.40
4846 5237 2.625639 AGGTGACCCTGTTCTTGATCT 58.374 47.619 0.00 0.00 40.58 2.75
4847 5238 4.508662 CTTAGGTGACCCTGTTCTTGATC 58.491 47.826 0.00 0.00 42.67 2.92
4848 5239 3.307762 GCTTAGGTGACCCTGTTCTTGAT 60.308 47.826 0.00 0.00 42.67 2.57
4849 5240 2.038557 GCTTAGGTGACCCTGTTCTTGA 59.961 50.000 0.00 0.00 42.67 3.02
4850 5241 2.224523 TGCTTAGGTGACCCTGTTCTTG 60.225 50.000 0.00 0.00 42.67 3.02
4851 5242 2.039084 CTGCTTAGGTGACCCTGTTCTT 59.961 50.000 0.00 0.00 42.67 2.52
4852 5243 1.625818 CTGCTTAGGTGACCCTGTTCT 59.374 52.381 0.00 0.00 42.67 3.01
4853 5244 1.946283 GCTGCTTAGGTGACCCTGTTC 60.946 57.143 0.00 0.00 42.67 3.18
4854 5245 0.036875 GCTGCTTAGGTGACCCTGTT 59.963 55.000 0.00 0.00 42.67 3.16
4855 5246 1.127567 TGCTGCTTAGGTGACCCTGT 61.128 55.000 0.00 0.00 42.67 4.00
4856 5247 0.036732 TTGCTGCTTAGGTGACCCTG 59.963 55.000 0.00 0.00 42.67 4.45
4857 5248 0.771127 TTTGCTGCTTAGGTGACCCT 59.229 50.000 0.00 0.00 45.51 4.34
4858 5249 1.616159 TTTTGCTGCTTAGGTGACCC 58.384 50.000 0.00 0.00 0.00 4.46
4859 5250 3.942130 ATTTTTGCTGCTTAGGTGACC 57.058 42.857 0.00 0.00 0.00 4.02
4860 5251 5.580911 CAAATTTTTGCTGCTTAGGTGAC 57.419 39.130 0.00 0.00 0.00 3.67
4877 5268 9.626045 GTTCTAGTGCTTTACTTATTGCAAATT 57.374 29.630 1.71 0.00 40.89 1.82
4878 5269 8.792633 TGTTCTAGTGCTTTACTTATTGCAAAT 58.207 29.630 1.71 0.00 40.89 2.32
4879 5270 8.160521 TGTTCTAGTGCTTTACTTATTGCAAA 57.839 30.769 1.71 0.00 40.89 3.68
4880 5271 7.737972 TGTTCTAGTGCTTTACTTATTGCAA 57.262 32.000 0.00 0.00 40.89 4.08
4881 5272 7.737972 TTGTTCTAGTGCTTTACTTATTGCA 57.262 32.000 0.00 0.00 40.89 4.08
4882 5273 9.458374 TTTTTGTTCTAGTGCTTTACTTATTGC 57.542 29.630 0.00 0.00 40.89 3.56
4890 5281 9.959749 CCAATTAGTTTTTGTTCTAGTGCTTTA 57.040 29.630 0.00 0.00 0.00 1.85
4891 5282 8.691797 TCCAATTAGTTTTTGTTCTAGTGCTTT 58.308 29.630 0.00 0.00 0.00 3.51
4892 5283 8.135529 GTCCAATTAGTTTTTGTTCTAGTGCTT 58.864 33.333 0.00 0.00 0.00 3.91
4893 5284 7.255486 GGTCCAATTAGTTTTTGTTCTAGTGCT 60.255 37.037 0.00 0.00 0.00 4.40
4894 5285 6.861572 GGTCCAATTAGTTTTTGTTCTAGTGC 59.138 38.462 0.00 0.00 0.00 4.40
4895 5286 7.936584 TGGTCCAATTAGTTTTTGTTCTAGTG 58.063 34.615 0.00 0.00 0.00 2.74
4896 5287 8.706322 ATGGTCCAATTAGTTTTTGTTCTAGT 57.294 30.769 0.00 0.00 0.00 2.57
4897 5288 9.410556 CAATGGTCCAATTAGTTTTTGTTCTAG 57.589 33.333 0.00 0.00 0.00 2.43
4898 5289 8.364142 CCAATGGTCCAATTAGTTTTTGTTCTA 58.636 33.333 0.00 0.00 0.00 2.10
4899 5290 7.070571 TCCAATGGTCCAATTAGTTTTTGTTCT 59.929 33.333 0.00 0.00 0.00 3.01
4900 5291 7.213678 TCCAATGGTCCAATTAGTTTTTGTTC 58.786 34.615 0.00 0.00 0.00 3.18
4901 5292 7.130681 TCCAATGGTCCAATTAGTTTTTGTT 57.869 32.000 0.00 0.00 0.00 2.83
4902 5293 6.239572 CCTCCAATGGTCCAATTAGTTTTTGT 60.240 38.462 0.00 0.00 0.00 2.83
4903 5294 6.014669 TCCTCCAATGGTCCAATTAGTTTTTG 60.015 38.462 0.00 0.00 0.00 2.44
4904 5295 6.081356 TCCTCCAATGGTCCAATTAGTTTTT 58.919 36.000 0.00 0.00 0.00 1.94
4905 5296 5.650283 TCCTCCAATGGTCCAATTAGTTTT 58.350 37.500 0.00 0.00 0.00 2.43
4906 5297 5.222337 ACTCCTCCAATGGTCCAATTAGTTT 60.222 40.000 0.00 0.00 0.00 2.66
4907 5298 4.292306 ACTCCTCCAATGGTCCAATTAGTT 59.708 41.667 0.00 0.00 0.00 2.24
4908 5299 3.852578 ACTCCTCCAATGGTCCAATTAGT 59.147 43.478 0.00 0.00 0.00 2.24
4909 5300 4.080356 TGACTCCTCCAATGGTCCAATTAG 60.080 45.833 0.00 0.00 0.00 1.73
4910 5301 3.849574 TGACTCCTCCAATGGTCCAATTA 59.150 43.478 0.00 0.00 0.00 1.40
4911 5302 2.649312 TGACTCCTCCAATGGTCCAATT 59.351 45.455 0.00 0.00 0.00 2.32
4912 5303 2.025887 GTGACTCCTCCAATGGTCCAAT 60.026 50.000 0.00 0.00 0.00 3.16
4913 5304 1.351017 GTGACTCCTCCAATGGTCCAA 59.649 52.381 0.00 0.00 0.00 3.53
4914 5305 0.984230 GTGACTCCTCCAATGGTCCA 59.016 55.000 0.00 0.00 0.00 4.02
4915 5306 0.984230 TGTGACTCCTCCAATGGTCC 59.016 55.000 0.00 0.00 0.00 4.46
4916 5307 3.432326 GGTATGTGACTCCTCCAATGGTC 60.432 52.174 0.00 0.00 0.00 4.02
4917 5308 2.505819 GGTATGTGACTCCTCCAATGGT 59.494 50.000 0.00 0.00 0.00 3.55
4918 5309 2.483714 CGGTATGTGACTCCTCCAATGG 60.484 54.545 0.00 0.00 0.00 3.16
4919 5310 2.430694 TCGGTATGTGACTCCTCCAATG 59.569 50.000 0.00 0.00 0.00 2.82
4920 5311 2.747177 TCGGTATGTGACTCCTCCAAT 58.253 47.619 0.00 0.00 0.00 3.16
4921 5312 2.225382 TCGGTATGTGACTCCTCCAA 57.775 50.000 0.00 0.00 0.00 3.53
4922 5313 2.100197 CTTCGGTATGTGACTCCTCCA 58.900 52.381 0.00 0.00 0.00 3.86
4923 5314 2.376109 TCTTCGGTATGTGACTCCTCC 58.624 52.381 0.00 0.00 0.00 4.30
4924 5315 3.192844 TGTTCTTCGGTATGTGACTCCTC 59.807 47.826 0.00 0.00 0.00 3.71
4925 5316 3.162666 TGTTCTTCGGTATGTGACTCCT 58.837 45.455 0.00 0.00 0.00 3.69
4926 5317 3.587797 TGTTCTTCGGTATGTGACTCC 57.412 47.619 0.00 0.00 0.00 3.85
4927 5318 4.201724 GCATTGTTCTTCGGTATGTGACTC 60.202 45.833 0.00 0.00 0.00 3.36
4928 5319 3.684788 GCATTGTTCTTCGGTATGTGACT 59.315 43.478 0.00 0.00 0.00 3.41
4929 5320 3.181510 GGCATTGTTCTTCGGTATGTGAC 60.182 47.826 0.00 0.00 0.00 3.67
4930 5321 3.006940 GGCATTGTTCTTCGGTATGTGA 58.993 45.455 0.00 0.00 0.00 3.58
4931 5322 2.097466 GGGCATTGTTCTTCGGTATGTG 59.903 50.000 0.00 0.00 0.00 3.21
4932 5323 2.365582 GGGCATTGTTCTTCGGTATGT 58.634 47.619 0.00 0.00 0.00 2.29
4933 5324 1.676006 GGGGCATTGTTCTTCGGTATG 59.324 52.381 0.00 0.00 0.00 2.39
4934 5325 1.283613 TGGGGCATTGTTCTTCGGTAT 59.716 47.619 0.00 0.00 0.00 2.73
4935 5326 0.693622 TGGGGCATTGTTCTTCGGTA 59.306 50.000 0.00 0.00 0.00 4.02
4936 5327 0.178975 TTGGGGCATTGTTCTTCGGT 60.179 50.000 0.00 0.00 0.00 4.69
4937 5328 0.965439 TTTGGGGCATTGTTCTTCGG 59.035 50.000 0.00 0.00 0.00 4.30
4938 5329 1.669795 GCTTTGGGGCATTGTTCTTCG 60.670 52.381 0.00 0.00 0.00 3.79
4939 5330 1.344114 TGCTTTGGGGCATTGTTCTTC 59.656 47.619 0.00 0.00 37.29 2.87
4940 5331 1.345415 CTGCTTTGGGGCATTGTTCTT 59.655 47.619 0.00 0.00 41.63 2.52
4941 5332 0.971386 CTGCTTTGGGGCATTGTTCT 59.029 50.000 0.00 0.00 41.63 3.01
4942 5333 0.681175 ACTGCTTTGGGGCATTGTTC 59.319 50.000 0.00 0.00 41.63 3.18
4943 5334 1.130777 AACTGCTTTGGGGCATTGTT 58.869 45.000 0.00 0.00 41.63 2.83
4944 5335 1.130777 AAACTGCTTTGGGGCATTGT 58.869 45.000 0.00 0.00 41.63 2.71
4945 5336 2.259266 AAAACTGCTTTGGGGCATTG 57.741 45.000 0.00 0.00 41.63 2.82
4946 5337 2.574450 CAAAAACTGCTTTGGGGCATT 58.426 42.857 0.00 0.00 41.63 3.56
4947 5338 2.259266 CAAAAACTGCTTTGGGGCAT 57.741 45.000 0.00 0.00 41.63 4.40
4948 5339 3.776616 CAAAAACTGCTTTGGGGCA 57.223 47.368 0.00 0.00 40.15 5.36
4953 5344 3.709987 CTCCACTCCAAAAACTGCTTTG 58.290 45.455 0.00 0.00 36.28 2.77
4954 5345 2.101415 GCTCCACTCCAAAAACTGCTTT 59.899 45.455 0.00 0.00 0.00 3.51
4955 5346 1.683385 GCTCCACTCCAAAAACTGCTT 59.317 47.619 0.00 0.00 0.00 3.91
4956 5347 1.133668 AGCTCCACTCCAAAAACTGCT 60.134 47.619 0.00 0.00 0.00 4.24
4957 5348 1.322442 AGCTCCACTCCAAAAACTGC 58.678 50.000 0.00 0.00 0.00 4.40
4958 5349 3.381272 TCAAAGCTCCACTCCAAAAACTG 59.619 43.478 0.00 0.00 0.00 3.16
4959 5350 3.631250 TCAAAGCTCCACTCCAAAAACT 58.369 40.909 0.00 0.00 0.00 2.66
4960 5351 3.796844 GCTCAAAGCTCCACTCCAAAAAC 60.797 47.826 0.00 0.00 38.45 2.43
4961 5352 2.362077 GCTCAAAGCTCCACTCCAAAAA 59.638 45.455 0.00 0.00 38.45 1.94
4962 5353 1.956477 GCTCAAAGCTCCACTCCAAAA 59.044 47.619 0.00 0.00 38.45 2.44
4963 5354 1.133823 TGCTCAAAGCTCCACTCCAAA 60.134 47.619 0.11 0.00 42.97 3.28
4964 5355 0.473755 TGCTCAAAGCTCCACTCCAA 59.526 50.000 0.11 0.00 42.97 3.53
4965 5356 0.473755 TTGCTCAAAGCTCCACTCCA 59.526 50.000 0.11 0.00 42.97 3.86
4966 5357 1.163554 CTTGCTCAAAGCTCCACTCC 58.836 55.000 0.11 0.00 42.97 3.85
4967 5358 1.163554 CCTTGCTCAAAGCTCCACTC 58.836 55.000 0.11 0.00 42.97 3.51
4968 5359 0.767375 TCCTTGCTCAAAGCTCCACT 59.233 50.000 0.11 0.00 42.97 4.00
4969 5360 1.163554 CTCCTTGCTCAAAGCTCCAC 58.836 55.000 0.11 0.00 42.97 4.02
4970 5361 1.059098 TCTCCTTGCTCAAAGCTCCA 58.941 50.000 0.11 0.00 42.97 3.86
4971 5362 2.287769 GATCTCCTTGCTCAAAGCTCC 58.712 52.381 0.11 0.00 42.97 4.70
4972 5363 1.932511 CGATCTCCTTGCTCAAAGCTC 59.067 52.381 0.11 0.00 42.97 4.09
4973 5364 1.552337 TCGATCTCCTTGCTCAAAGCT 59.448 47.619 0.11 0.00 42.97 3.74
4974 5365 2.015736 TCGATCTCCTTGCTCAAAGC 57.984 50.000 0.00 0.00 42.82 3.51
4975 5366 5.330295 CATTTTCGATCTCCTTGCTCAAAG 58.670 41.667 0.00 0.00 35.47 2.77
4976 5367 4.156556 CCATTTTCGATCTCCTTGCTCAAA 59.843 41.667 0.00 0.00 0.00 2.69
4977 5368 3.691118 CCATTTTCGATCTCCTTGCTCAA 59.309 43.478 0.00 0.00 0.00 3.02
4978 5369 3.273434 CCATTTTCGATCTCCTTGCTCA 58.727 45.455 0.00 0.00 0.00 4.26
4979 5370 2.032675 GCCATTTTCGATCTCCTTGCTC 59.967 50.000 0.00 0.00 0.00 4.26
4980 5371 2.019984 GCCATTTTCGATCTCCTTGCT 58.980 47.619 0.00 0.00 0.00 3.91
4981 5372 1.745087 TGCCATTTTCGATCTCCTTGC 59.255 47.619 0.00 0.00 0.00 4.01
4982 5373 2.223433 GCTGCCATTTTCGATCTCCTTG 60.223 50.000 0.00 0.00 0.00 3.61
4983 5374 2.019984 GCTGCCATTTTCGATCTCCTT 58.980 47.619 0.00 0.00 0.00 3.36
4984 5375 1.065199 TGCTGCCATTTTCGATCTCCT 60.065 47.619 0.00 0.00 0.00 3.69
4985 5376 1.382522 TGCTGCCATTTTCGATCTCC 58.617 50.000 0.00 0.00 0.00 3.71
4986 5377 2.679837 TCTTGCTGCCATTTTCGATCTC 59.320 45.455 0.00 0.00 0.00 2.75
4987 5378 2.715046 TCTTGCTGCCATTTTCGATCT 58.285 42.857 0.00 0.00 0.00 2.75
4988 5379 3.065786 TCATCTTGCTGCCATTTTCGATC 59.934 43.478 0.00 0.00 0.00 3.69
4989 5380 3.018856 TCATCTTGCTGCCATTTTCGAT 58.981 40.909 0.00 0.00 0.00 3.59
4990 5381 2.421073 CTCATCTTGCTGCCATTTTCGA 59.579 45.455 0.00 0.00 0.00 3.71
4991 5382 2.793933 CTCATCTTGCTGCCATTTTCG 58.206 47.619 0.00 0.00 0.00 3.46
4992 5383 2.165845 AGCTCATCTTGCTGCCATTTTC 59.834 45.455 0.00 0.00 39.56 2.29
4993 5384 2.176889 AGCTCATCTTGCTGCCATTTT 58.823 42.857 0.00 0.00 39.56 1.82
4994 5385 1.848652 AGCTCATCTTGCTGCCATTT 58.151 45.000 0.00 0.00 39.56 2.32
4995 5386 2.172082 TCTAGCTCATCTTGCTGCCATT 59.828 45.455 0.00 0.00 41.32 3.16
4996 5387 1.767088 TCTAGCTCATCTTGCTGCCAT 59.233 47.619 0.00 0.00 41.32 4.40
4997 5388 1.197812 TCTAGCTCATCTTGCTGCCA 58.802 50.000 0.00 0.00 41.32 4.92
4998 5389 1.939255 GTTCTAGCTCATCTTGCTGCC 59.061 52.381 0.00 0.00 41.32 4.85
4999 5390 2.351111 GTGTTCTAGCTCATCTTGCTGC 59.649 50.000 0.00 0.00 41.32 5.25
5000 5391 2.602211 CGTGTTCTAGCTCATCTTGCTG 59.398 50.000 0.00 0.00 41.32 4.41
5001 5392 2.417924 CCGTGTTCTAGCTCATCTTGCT 60.418 50.000 0.00 0.00 43.79 3.91
5002 5393 1.929836 CCGTGTTCTAGCTCATCTTGC 59.070 52.381 0.00 0.00 0.00 4.01
5003 5394 2.093973 ACCCGTGTTCTAGCTCATCTTG 60.094 50.000 0.00 0.00 0.00 3.02
5004 5395 2.180276 ACCCGTGTTCTAGCTCATCTT 58.820 47.619 0.00 0.00 0.00 2.40
5005 5396 1.853963 ACCCGTGTTCTAGCTCATCT 58.146 50.000 0.00 0.00 0.00 2.90
5006 5397 2.673368 CAAACCCGTGTTCTAGCTCATC 59.327 50.000 0.00 0.00 32.15 2.92
5007 5398 2.301870 TCAAACCCGTGTTCTAGCTCAT 59.698 45.455 0.00 0.00 32.15 2.90
5008 5399 1.689813 TCAAACCCGTGTTCTAGCTCA 59.310 47.619 0.00 0.00 32.15 4.26
5009 5400 2.338500 CTCAAACCCGTGTTCTAGCTC 58.662 52.381 0.00 0.00 32.15 4.09
5010 5401 1.608283 GCTCAAACCCGTGTTCTAGCT 60.608 52.381 9.15 0.00 38.31 3.32
5011 5402 0.796927 GCTCAAACCCGTGTTCTAGC 59.203 55.000 2.48 2.48 35.96 3.42
5012 5403 2.457366 AGCTCAAACCCGTGTTCTAG 57.543 50.000 0.00 0.00 32.15 2.43
5013 5404 3.369052 CCATAGCTCAAACCCGTGTTCTA 60.369 47.826 0.00 0.00 32.15 2.10
5014 5405 2.615493 CCATAGCTCAAACCCGTGTTCT 60.615 50.000 0.00 0.00 32.15 3.01
5015 5406 1.737793 CCATAGCTCAAACCCGTGTTC 59.262 52.381 0.00 0.00 32.15 3.18
5016 5407 1.613255 CCCATAGCTCAAACCCGTGTT 60.613 52.381 0.00 0.00 35.82 3.32
5017 5408 0.035439 CCCATAGCTCAAACCCGTGT 60.035 55.000 0.00 0.00 0.00 4.49
5018 5409 0.251916 TCCCATAGCTCAAACCCGTG 59.748 55.000 0.00 0.00 0.00 4.94
5019 5410 0.541863 CTCCCATAGCTCAAACCCGT 59.458 55.000 0.00 0.00 0.00 5.28
5020 5411 0.179045 CCTCCCATAGCTCAAACCCG 60.179 60.000 0.00 0.00 0.00 5.28
5021 5412 1.213296 TCCTCCCATAGCTCAAACCC 58.787 55.000 0.00 0.00 0.00 4.11
5022 5413 3.584733 AATCCTCCCATAGCTCAAACC 57.415 47.619 0.00 0.00 0.00 3.27
5023 5414 5.921962 AAAAATCCTCCCATAGCTCAAAC 57.078 39.130 0.00 0.00 0.00 2.93
5042 5433 2.171870 ACTTCGTGTCCCTCCAGAAAAA 59.828 45.455 0.00 0.00 0.00 1.94
5043 5434 1.766496 ACTTCGTGTCCCTCCAGAAAA 59.234 47.619 0.00 0.00 0.00 2.29
5044 5435 1.070134 CACTTCGTGTCCCTCCAGAAA 59.930 52.381 0.00 0.00 0.00 2.52
5045 5436 0.679505 CACTTCGTGTCCCTCCAGAA 59.320 55.000 0.00 0.00 0.00 3.02
5046 5437 0.178973 TCACTTCGTGTCCCTCCAGA 60.179 55.000 0.00 0.00 34.79 3.86
5047 5438 0.244994 CTCACTTCGTGTCCCTCCAG 59.755 60.000 0.00 0.00 34.79 3.86
5048 5439 0.469331 ACTCACTTCGTGTCCCTCCA 60.469 55.000 0.00 0.00 34.79 3.86
5049 5440 0.038159 CACTCACTTCGTGTCCCTCC 60.038 60.000 0.00 0.00 34.79 4.30
5050 5441 0.038159 CCACTCACTTCGTGTCCCTC 60.038 60.000 0.00 0.00 34.79 4.30
5051 5442 1.472662 CCCACTCACTTCGTGTCCCT 61.473 60.000 0.00 0.00 34.79 4.20
5052 5443 1.004918 CCCACTCACTTCGTGTCCC 60.005 63.158 0.00 0.00 34.79 4.46
5053 5444 0.600255 CACCCACTCACTTCGTGTCC 60.600 60.000 0.00 0.00 34.79 4.02
5054 5445 0.104304 ACACCCACTCACTTCGTGTC 59.896 55.000 0.00 0.00 32.34 3.67
5055 5446 1.340248 CTACACCCACTCACTTCGTGT 59.660 52.381 0.00 0.00 40.57 4.49
5056 5447 1.336887 CCTACACCCACTCACTTCGTG 60.337 57.143 0.00 0.00 34.45 4.35
5057 5448 0.966920 CCTACACCCACTCACTTCGT 59.033 55.000 0.00 0.00 0.00 3.85
5058 5449 1.254026 TCCTACACCCACTCACTTCG 58.746 55.000 0.00 0.00 0.00 3.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.