Multiple sequence alignment - TraesCS7D01G145500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G145500 chr7D 100.000 3683 0 0 1 3683 92635384 92639066 0.000000e+00 6802.0
1 TraesCS7D01G145500 chr7D 100.000 242 0 0 3850 4091 92639233 92639474 8.070000e-122 448.0
2 TraesCS7D01G145500 chr7D 89.286 56 5 1 3622 3677 582165393 582165447 7.340000e-08 69.4
3 TraesCS7D01G145500 chr7B 91.044 1418 72 29 572 1961 44941364 44939974 0.000000e+00 1864.0
4 TraesCS7D01G145500 chr7B 88.753 898 72 20 2424 3317 44939182 44938310 0.000000e+00 1072.0
5 TraesCS7D01G145500 chr7B 88.669 556 41 10 1 553 44941968 44941432 0.000000e+00 658.0
6 TraesCS7D01G145500 chr7B 97.297 37 1 0 3358 3394 44938306 44938270 3.410000e-06 63.9
7 TraesCS7D01G145500 chr7A 90.473 1396 77 24 580 1961 94786485 94785132 0.000000e+00 1790.0
8 TraesCS7D01G145500 chr7A 85.452 1196 114 31 2060 3248 94784712 94783570 0.000000e+00 1190.0
9 TraesCS7D01G145500 chr7A 91.516 554 36 7 1 551 94787105 94786560 0.000000e+00 752.0
10 TraesCS7D01G145500 chr7A 93.103 232 15 1 3453 3683 94783473 94783242 5.070000e-89 339.0
11 TraesCS7D01G145500 chr2A 90.566 106 9 1 3860 3965 88328496 88328392 5.510000e-29 139.0
12 TraesCS7D01G145500 chr2A 89.286 56 5 1 3625 3679 139859743 139859688 7.340000e-08 69.4
13 TraesCS7D01G145500 chr2A 89.286 56 5 1 3625 3679 632618647 632618592 7.340000e-08 69.4
14 TraesCS7D01G145500 chr5A 92.453 53 4 0 3618 3670 315267726 315267778 4.390000e-10 76.8
15 TraesCS7D01G145500 chr5B 95.652 46 2 0 3626 3671 427243662 427243617 1.580000e-09 75.0
16 TraesCS7D01G145500 chr4B 95.652 46 2 0 3625 3670 472388219 472388264 1.580000e-09 75.0
17 TraesCS7D01G145500 chr3D 88.889 54 6 0 3625 3678 134083000 134083053 2.640000e-07 67.6
18 TraesCS7D01G145500 chr2D 88.889 54 6 0 3625 3678 296771630 296771577 2.640000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G145500 chr7D 92635384 92639474 4090 False 3625.000 6802 100.00000 1 4091 2 chr7D.!!$F2 4090
1 TraesCS7D01G145500 chr7B 44938270 44941968 3698 True 914.475 1864 91.44075 1 3394 4 chr7B.!!$R1 3393
2 TraesCS7D01G145500 chr7A 94783242 94787105 3863 True 1017.750 1790 90.13600 1 3683 4 chr7A.!!$R1 3682

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
895 960 0.112606 ACTTCTCCTCCCAGTCGTCA 59.887 55.0 0.0 0.0 0.0 4.35 F
917 985 0.188342 TTTCTTCCCTTTGCCTGCCT 59.812 50.0 0.0 0.0 0.0 4.75 F
2353 2778 0.601558 GTGAGGCAGTGGTTCGTCTA 59.398 55.0 0.0 0.0 0.0 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1851 1943 0.106708 ATGCATATTCCGCGACACCT 59.893 50.0 8.23 0.00 0.00 4.00 R
2561 3009 0.241749 TGCTACAGCTGCAACATTGC 59.758 50.0 15.27 9.70 45.92 3.56 R
3304 3755 0.034186 AACACGGATGCCATGGTGAT 60.034 50.0 14.67 5.82 34.59 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 1.977188 CGAAATCCGGAAGCAAAACC 58.023 50.000 9.01 0.00 33.91 3.27
66 67 3.058639 GCAAAACCAGTGCAAAAACAACA 60.059 39.130 0.00 0.00 41.80 3.33
74 75 4.682860 CAGTGCAAAAACAACATGATCTCC 59.317 41.667 0.00 0.00 0.00 3.71
97 98 8.234136 TCCTTAGTTACAGTCACACATATAGG 57.766 38.462 0.00 0.00 0.00 2.57
205 206 3.261897 TGACTTCATCCTGAGTCCTTTCC 59.738 47.826 1.51 0.00 0.00 3.13
206 207 2.573915 ACTTCATCCTGAGTCCTTTCCC 59.426 50.000 0.00 0.00 0.00 3.97
223 224 1.071699 TCCCCTTCAGAAAAGTCACGG 59.928 52.381 0.00 0.00 0.00 4.94
290 293 5.971895 TTTTTCATTTGAACAGAAGCTGC 57.028 34.783 0.00 0.00 34.37 5.25
376 381 7.807977 TTGCCCTTCAAGAAGTGATATATTC 57.192 36.000 8.83 0.00 35.70 1.75
387 392 7.155328 AGAAGTGATATATTCGCCCTTACTTG 58.845 38.462 0.00 0.00 35.32 3.16
424 429 3.849911 TGATCTTTGTCTTCTGCCTACG 58.150 45.455 0.00 0.00 0.00 3.51
437 442 7.871463 GTCTTCTGCCTACGTGGTATAAATTAT 59.129 37.037 0.00 0.00 38.35 1.28
440 445 5.612351 TGCCTACGTGGTATAAATTATGCA 58.388 37.500 0.00 0.00 38.35 3.96
485 490 4.349501 GCTCATTTTAATCAGACTGCAGC 58.650 43.478 15.27 6.85 0.00 5.25
531 536 5.009610 ACATAAATCACACCTTGAACACACC 59.990 40.000 0.00 0.00 37.92 4.16
542 547 5.186021 ACCTTGAACACACCACATTTTGTTA 59.814 36.000 0.00 0.00 32.34 2.41
547 552 2.985809 CACACCACATTTTGTTATGCCG 59.014 45.455 0.00 0.00 0.00 5.69
553 558 4.928615 CCACATTTTGTTATGCCGACATTT 59.071 37.500 0.00 0.00 37.74 2.32
554 559 5.407995 CCACATTTTGTTATGCCGACATTTT 59.592 36.000 0.00 0.00 37.74 1.82
594 650 1.490574 AGGACTCTTAGCTGGCGAAT 58.509 50.000 0.00 0.00 0.00 3.34
609 665 2.579207 CGAATGTTCGCTAGAAGGGA 57.421 50.000 1.90 0.00 44.26 4.20
629 686 3.365969 GGAGTGGCATTTCGAACGATTTT 60.366 43.478 0.00 0.00 0.00 1.82
634 691 4.452795 TGGCATTTCGAACGATTTTACTGA 59.547 37.500 0.00 0.00 0.00 3.41
647 704 9.821662 AACGATTTTACTGATAGTTTTAGTTGC 57.178 29.630 0.00 0.00 0.00 4.17
668 725 2.143925 GAGGGGTTGACAACTTCTTCG 58.856 52.381 17.52 0.00 0.00 3.79
669 726 1.202770 AGGGGTTGACAACTTCTTCGG 60.203 52.381 17.52 0.00 0.00 4.30
679 736 3.315191 ACAACTTCTTCGGAACAACATGG 59.685 43.478 0.00 0.00 0.00 3.66
689 746 3.383761 GGAACAACATGGCAGTTTCTTG 58.616 45.455 0.00 0.00 0.00 3.02
694 751 4.037208 ACAACATGGCAGTTTCTTGAGAAG 59.963 41.667 0.00 0.00 35.21 2.85
716 775 9.083080 AGAAGAAGACATTTTTGTTTAAAACCG 57.917 29.630 0.00 0.00 38.48 4.44
717 776 7.229228 AGAAGACATTTTTGTTTAAAACCGC 57.771 32.000 0.00 0.00 38.48 5.68
718 777 5.977171 AGACATTTTTGTTTAAAACCGCC 57.023 34.783 0.00 0.00 38.48 6.13
719 778 5.420409 AGACATTTTTGTTTAAAACCGCCA 58.580 33.333 0.00 0.00 38.48 5.69
720 779 5.292345 AGACATTTTTGTTTAAAACCGCCAC 59.708 36.000 0.00 0.00 38.48 5.01
721 780 4.333095 ACATTTTTGTTTAAAACCGCCACC 59.667 37.500 0.00 0.00 38.48 4.61
722 781 2.205307 TTTGTTTAAAACCGCCACCG 57.795 45.000 0.00 0.00 0.00 4.94
723 782 1.101331 TTGTTTAAAACCGCCACCGT 58.899 45.000 0.00 0.00 0.00 4.83
724 783 1.101331 TGTTTAAAACCGCCACCGTT 58.899 45.000 0.00 0.00 0.00 4.44
725 784 1.475682 TGTTTAAAACCGCCACCGTTT 59.524 42.857 0.00 0.00 0.00 3.60
732 791 0.820074 ACCGCCACCGTTTGATTTCA 60.820 50.000 0.00 0.00 0.00 2.69
733 792 0.525761 CCGCCACCGTTTGATTTCAT 59.474 50.000 0.00 0.00 0.00 2.57
734 793 1.616620 CGCCACCGTTTGATTTCATG 58.383 50.000 0.00 0.00 0.00 3.07
741 800 4.383649 CACCGTTTGATTTCATGAAGCAAG 59.616 41.667 18.91 13.36 43.74 4.01
747 806 8.209869 CGTTTGATTTCATGAAGCAAGTAAAAG 58.790 33.333 18.91 10.86 43.74 2.27
749 811 8.578308 TTGATTTCATGAAGCAAGTAAAAGTG 57.422 30.769 17.00 0.00 38.62 3.16
761 823 5.402568 GCAAGTAAAAGTGCTAGGAAAAAGC 59.597 40.000 0.00 0.00 40.50 3.51
782 844 2.202932 CGCTTGTCATCCCCTCCG 60.203 66.667 0.00 0.00 0.00 4.63
789 851 1.758514 TCATCCCCTCCGAGCTGAC 60.759 63.158 0.00 0.00 0.00 3.51
798 860 2.733218 CGAGCTGACGTTCGCCAA 60.733 61.111 0.00 0.00 37.08 4.52
810 872 3.752222 ACGTTCGCCAAATAACATTACCA 59.248 39.130 0.00 0.00 0.00 3.25
876 941 4.012374 AGTCAATTCCCTCGTTCGTACTA 58.988 43.478 0.00 0.00 0.00 1.82
877 942 4.101235 GTCAATTCCCTCGTTCGTACTAC 58.899 47.826 0.00 0.00 0.00 2.73
878 943 4.012374 TCAATTCCCTCGTTCGTACTACT 58.988 43.478 0.00 0.00 0.00 2.57
895 960 0.112606 ACTTCTCCTCCCAGTCGTCA 59.887 55.000 0.00 0.00 0.00 4.35
898 966 1.938585 TCTCCTCCCAGTCGTCATTT 58.061 50.000 0.00 0.00 0.00 2.32
916 984 1.047801 TTTTCTTCCCTTTGCCTGCC 58.952 50.000 0.00 0.00 0.00 4.85
917 985 0.188342 TTTCTTCCCTTTGCCTGCCT 59.812 50.000 0.00 0.00 0.00 4.75
953 1021 2.187946 GCCTCCGATGACCACAGG 59.812 66.667 0.00 0.00 0.00 4.00
1380 1460 4.893601 GGCGCGGCCTACTTCCTC 62.894 72.222 23.89 0.00 46.69 3.71
1489 1569 2.904866 GCAACTGGTTCGGCCACA 60.905 61.111 2.24 0.00 43.61 4.17
1611 1691 2.280524 TGGTCGTTCTTGGTGCCG 60.281 61.111 0.00 0.00 0.00 5.69
1632 1712 2.398554 ATTCGTCATTGCCGCGCTT 61.399 52.632 5.56 0.00 0.00 4.68
1681 1761 4.101448 ACCCGAGTGATGCTGGCC 62.101 66.667 0.00 0.00 0.00 5.36
1686 1766 1.153208 GAGTGATGCTGGCCTGGAG 60.153 63.158 12.06 0.00 0.00 3.86
1695 1775 4.891037 GGCCTGGAGCTGGATGCC 62.891 72.222 0.00 0.00 44.23 4.40
1781 1867 3.881688 GAGGTTGAAGTGGATGATGATGG 59.118 47.826 0.00 0.00 0.00 3.51
1947 2039 4.028131 TCTACATCCGGAACAATGGTACT 58.972 43.478 9.01 0.00 0.00 2.73
1948 2040 5.202765 TCTACATCCGGAACAATGGTACTA 58.797 41.667 9.01 0.00 0.00 1.82
1949 2041 5.836898 TCTACATCCGGAACAATGGTACTAT 59.163 40.000 9.01 0.00 0.00 2.12
1950 2042 4.703897 ACATCCGGAACAATGGTACTATG 58.296 43.478 9.01 0.00 0.00 2.23
1952 2044 4.131649 TCCGGAACAATGGTACTATGTG 57.868 45.455 0.00 0.00 0.00 3.21
1966 2092 8.486942 TGGTACTATGTGCTTATATTACCACT 57.513 34.615 17.74 0.00 40.74 4.00
1978 2104 9.057089 GCTTATATTACCACTTTGTTATCTGCT 57.943 33.333 0.00 0.00 0.00 4.24
1980 2106 7.715265 ATATTACCACTTTGTTATCTGCTCG 57.285 36.000 0.00 0.00 0.00 5.03
1981 2107 2.076863 ACCACTTTGTTATCTGCTCGC 58.923 47.619 0.00 0.00 0.00 5.03
1982 2108 2.289694 ACCACTTTGTTATCTGCTCGCT 60.290 45.455 0.00 0.00 0.00 4.93
1983 2109 2.744202 CCACTTTGTTATCTGCTCGCTT 59.256 45.455 0.00 0.00 0.00 4.68
2004 2269 7.011389 TCGCTTCTTATTGGACAACATAATCTG 59.989 37.037 0.00 0.00 0.00 2.90
2007 2272 8.523915 TTCTTATTGGACAACATAATCTGCAT 57.476 30.769 0.00 0.00 0.00 3.96
2010 2275 9.590451 CTTATTGGACAACATAATCTGCATTTT 57.410 29.630 0.00 0.00 0.00 1.82
2012 2277 5.639757 TGGACAACATAATCTGCATTTTCG 58.360 37.500 0.00 0.00 0.00 3.46
2024 2289 3.693300 GCATTTTCGTGCACAATCAAG 57.307 42.857 18.64 3.29 44.43 3.02
2033 2298 6.552859 TCGTGCACAATCAAGAATTTAAGA 57.447 33.333 18.64 0.00 0.00 2.10
2037 2302 7.217636 CGTGCACAATCAAGAATTTAAGATCTG 59.782 37.037 18.64 0.00 0.00 2.90
2090 2507 5.653255 AATGGGGCTAATTGATGTCTAGT 57.347 39.130 0.00 0.00 0.00 2.57
2091 2508 5.653255 ATGGGGCTAATTGATGTCTAGTT 57.347 39.130 0.00 0.00 0.00 2.24
2092 2509 5.450818 TGGGGCTAATTGATGTCTAGTTT 57.549 39.130 0.00 0.00 0.00 2.66
2097 2514 7.201741 GGGGCTAATTGATGTCTAGTTTTTCTC 60.202 40.741 0.00 0.00 0.00 2.87
2105 2522 5.073311 TGTCTAGTTTTTCTCAGGGATCG 57.927 43.478 0.00 0.00 0.00 3.69
2106 2523 3.866327 GTCTAGTTTTTCTCAGGGATCGC 59.134 47.826 0.54 0.54 0.00 4.58
2111 2528 3.992943 TTTTCTCAGGGATCGCCTTTA 57.007 42.857 6.09 0.00 0.00 1.85
2116 2533 4.451900 TCTCAGGGATCGCCTTTAAATTC 58.548 43.478 6.09 0.00 0.00 2.17
2117 2534 4.164221 TCTCAGGGATCGCCTTTAAATTCT 59.836 41.667 6.09 0.00 0.00 2.40
2118 2535 4.451900 TCAGGGATCGCCTTTAAATTCTC 58.548 43.478 6.09 0.00 0.00 2.87
2123 2540 6.036470 GGGATCGCCTTTAAATTCTCTTTTG 58.964 40.000 0.00 0.00 0.00 2.44
2127 2544 5.303333 TCGCCTTTAAATTCTCTTTTGGGTT 59.697 36.000 0.00 0.00 0.00 4.11
2129 2546 6.145534 CGCCTTTAAATTCTCTTTTGGGTTTC 59.854 38.462 0.00 0.00 0.00 2.78
2145 2562 6.662865 TGGGTTTCATTTTCAGCATTTCTA 57.337 33.333 0.00 0.00 0.00 2.10
2149 2566 7.154656 GGTTTCATTTTCAGCATTTCTACCTT 58.845 34.615 0.00 0.00 0.00 3.50
2181 2602 7.383687 AGTAGCAATGTAGCAGTGTTAGTTTA 58.616 34.615 0.00 0.00 27.83 2.01
2182 2603 6.481954 AGCAATGTAGCAGTGTTAGTTTAC 57.518 37.500 0.00 0.00 36.85 2.01
2184 2605 7.383687 AGCAATGTAGCAGTGTTAGTTTACTA 58.616 34.615 0.00 0.00 36.85 1.82
2188 2609 6.989659 TGTAGCAGTGTTAGTTTACTAAGCT 58.010 36.000 14.55 14.55 38.94 3.74
2192 2617 6.424207 AGCAGTGTTAGTTTACTAAGCTGTTC 59.576 38.462 21.84 13.57 40.65 3.18
2209 2634 7.440523 AGCTGTTCTAAGAGGTTAAAATGTG 57.559 36.000 0.00 0.00 0.00 3.21
2220 2645 8.310122 AGAGGTTAAAATGTGGCATATTGAAT 57.690 30.769 10.37 3.30 0.00 2.57
2228 2653 8.483307 AAATGTGGCATATTGAATTGAAGAAC 57.517 30.769 10.37 0.00 0.00 3.01
2245 2670 6.419791 TGAAGAACCCTCTTTTTGTTGAGTA 58.580 36.000 0.00 0.00 42.19 2.59
2248 2673 7.096884 AGAACCCTCTTTTTGTTGAGTAAAC 57.903 36.000 0.00 0.00 39.41 2.01
2251 2676 5.359860 ACCCTCTTTTTGTTGAGTAAACTGG 59.640 40.000 0.00 0.00 39.70 4.00
2258 2683 6.554334 TTTGTTGAGTAAACTGGATGCTAC 57.446 37.500 0.00 0.00 39.70 3.58
2265 2690 4.943705 AGTAAACTGGATGCTACCAACATG 59.056 41.667 0.00 0.00 39.59 3.21
2266 2691 3.439857 AACTGGATGCTACCAACATGT 57.560 42.857 0.00 0.00 39.59 3.21
2267 2692 4.568072 AACTGGATGCTACCAACATGTA 57.432 40.909 0.00 0.00 39.59 2.29
2270 2695 3.817084 CTGGATGCTACCAACATGTATGG 59.183 47.826 19.38 19.38 43.84 2.74
2296 2721 7.118971 GTCTCCATGCATCATTTATCTTCCTAC 59.881 40.741 0.00 0.00 0.00 3.18
2297 2722 7.016957 TCTCCATGCATCATTTATCTTCCTACT 59.983 37.037 0.00 0.00 0.00 2.57
2298 2723 7.520798 TCCATGCATCATTTATCTTCCTACTT 58.479 34.615 0.00 0.00 0.00 2.24
2299 2724 8.000709 TCCATGCATCATTTATCTTCCTACTTT 58.999 33.333 0.00 0.00 0.00 2.66
2300 2725 8.636213 CCATGCATCATTTATCTTCCTACTTTT 58.364 33.333 0.00 0.00 0.00 2.27
2303 2728 9.679661 TGCATCATTTATCTTCCTACTTTTACA 57.320 29.630 0.00 0.00 0.00 2.41
2330 2755 8.414003 GGTAGAGATATCATAACAGTTGACACA 58.586 37.037 5.32 0.00 0.00 3.72
2332 2757 6.975197 AGAGATATCATAACAGTTGACACACG 59.025 38.462 5.32 0.00 0.00 4.49
2335 2760 2.103432 TCATAACAGTTGACACACGGGT 59.897 45.455 0.00 0.00 0.00 5.28
2345 2770 3.941188 ACACGGGTGAGGCAGTGG 61.941 66.667 5.71 0.00 38.78 4.00
2348 2773 2.358737 CGGGTGAGGCAGTGGTTC 60.359 66.667 0.00 0.00 0.00 3.62
2349 2774 2.358737 GGGTGAGGCAGTGGTTCG 60.359 66.667 0.00 0.00 0.00 3.95
2350 2775 2.426023 GGTGAGGCAGTGGTTCGT 59.574 61.111 0.00 0.00 0.00 3.85
2351 2776 1.668151 GGTGAGGCAGTGGTTCGTC 60.668 63.158 0.00 0.00 0.00 4.20
2352 2777 1.367840 GTGAGGCAGTGGTTCGTCT 59.632 57.895 0.00 0.00 0.00 4.18
2353 2778 0.601558 GTGAGGCAGTGGTTCGTCTA 59.398 55.000 0.00 0.00 0.00 2.59
2354 2779 0.888619 TGAGGCAGTGGTTCGTCTAG 59.111 55.000 0.00 0.00 0.00 2.43
2356 2781 1.272769 GAGGCAGTGGTTCGTCTAGTT 59.727 52.381 0.00 0.00 0.00 2.24
2359 2784 3.514309 AGGCAGTGGTTCGTCTAGTTTAT 59.486 43.478 0.00 0.00 0.00 1.40
2360 2785 3.617263 GGCAGTGGTTCGTCTAGTTTATG 59.383 47.826 0.00 0.00 0.00 1.90
2380 2805 9.569122 GTTTATGATATTGTGTAACCTACCCAT 57.431 33.333 0.00 0.00 34.36 4.00
2381 2806 9.567776 TTTATGATATTGTGTAACCTACCCATG 57.432 33.333 0.00 0.00 34.36 3.66
2382 2807 5.373222 TGATATTGTGTAACCTACCCATGC 58.627 41.667 0.00 0.00 34.36 4.06
2389 2814 2.514458 AACCTACCCATGCTTCCTTG 57.486 50.000 0.00 0.00 0.00 3.61
2390 2815 0.625849 ACCTACCCATGCTTCCTTGG 59.374 55.000 0.00 0.00 36.34 3.61
2399 2824 1.039856 TGCTTCCTTGGGTTTGCTTC 58.960 50.000 0.00 0.00 0.00 3.86
2400 2825 1.332195 GCTTCCTTGGGTTTGCTTCT 58.668 50.000 0.00 0.00 0.00 2.85
2406 2831 3.117663 TCCTTGGGTTTGCTTCTGTAGTT 60.118 43.478 0.00 0.00 0.00 2.24
2408 2833 3.569194 TGGGTTTGCTTCTGTAGTTCA 57.431 42.857 0.00 0.00 0.00 3.18
2409 2834 3.476552 TGGGTTTGCTTCTGTAGTTCAG 58.523 45.455 0.00 0.00 44.85 3.02
2410 2835 3.118038 TGGGTTTGCTTCTGTAGTTCAGT 60.118 43.478 0.00 0.00 43.97 3.41
2411 2836 4.101898 TGGGTTTGCTTCTGTAGTTCAGTA 59.898 41.667 0.00 0.00 43.97 2.74
2413 2838 5.298347 GGTTTGCTTCTGTAGTTCAGTAGT 58.702 41.667 5.52 0.00 41.54 2.73
2415 2840 6.073711 GGTTTGCTTCTGTAGTTCAGTAGTTC 60.074 42.308 5.52 0.00 41.54 3.01
2416 2841 6.406692 TTGCTTCTGTAGTTCAGTAGTTCT 57.593 37.500 5.52 0.00 41.54 3.01
2417 2842 7.520451 TTGCTTCTGTAGTTCAGTAGTTCTA 57.480 36.000 5.52 0.00 41.54 2.10
2418 2843 7.520451 TGCTTCTGTAGTTCAGTAGTTCTAA 57.480 36.000 5.52 0.00 41.54 2.10
2419 2844 7.594714 TGCTTCTGTAGTTCAGTAGTTCTAAG 58.405 38.462 5.52 0.00 41.54 2.18
2421 2846 6.512342 TCTGTAGTTCAGTAGTTCTAAGGC 57.488 41.667 0.00 0.00 43.97 4.35
2422 2847 6.246919 TCTGTAGTTCAGTAGTTCTAAGGCT 58.753 40.000 0.00 0.00 43.97 4.58
2424 2849 7.553402 TCTGTAGTTCAGTAGTTCTAAGGCTAG 59.447 40.741 0.00 0.00 43.97 3.42
2425 2850 6.602406 TGTAGTTCAGTAGTTCTAAGGCTAGG 59.398 42.308 0.00 0.00 0.00 3.02
2426 2851 5.828871 AGTTCAGTAGTTCTAAGGCTAGGA 58.171 41.667 0.00 0.00 0.00 2.94
2427 2852 5.889289 AGTTCAGTAGTTCTAAGGCTAGGAG 59.111 44.000 0.00 0.00 0.00 3.69
2428 2853 5.453866 TCAGTAGTTCTAAGGCTAGGAGT 57.546 43.478 0.00 0.00 0.00 3.85
2442 2889 8.563123 AAGGCTAGGAGTAAATTAAAAGTGAC 57.437 34.615 0.00 0.00 0.00 3.67
2483 2931 3.731652 TGCTACTTGTTGCAAGCATTT 57.268 38.095 0.00 0.00 39.92 2.32
2484 2932 4.057406 TGCTACTTGTTGCAAGCATTTT 57.943 36.364 0.00 0.00 39.92 1.82
2486 2934 4.507388 TGCTACTTGTTGCAAGCATTTTTC 59.493 37.500 0.00 0.00 39.92 2.29
2487 2935 4.507388 GCTACTTGTTGCAAGCATTTTTCA 59.493 37.500 0.00 0.00 35.05 2.69
2491 2939 4.712191 TGTTGCAAGCATTTTTCATTCG 57.288 36.364 0.00 0.00 0.00 3.34
2495 2943 3.059166 GCAAGCATTTTTCATTCGGTGT 58.941 40.909 0.00 0.00 0.00 4.16
2503 2951 6.640907 GCATTTTTCATTCGGTGTAGAACTTT 59.359 34.615 0.00 0.00 32.39 2.66
2507 2955 4.320870 TCATTCGGTGTAGAACTTTTCCC 58.679 43.478 0.00 0.00 32.39 3.97
2508 2956 2.443887 TCGGTGTAGAACTTTTCCCG 57.556 50.000 0.00 0.00 33.76 5.14
2509 2957 1.962807 TCGGTGTAGAACTTTTCCCGA 59.037 47.619 0.00 0.00 37.42 5.14
2510 2958 2.064014 CGGTGTAGAACTTTTCCCGAC 58.936 52.381 0.00 0.00 34.16 4.79
2514 2962 4.868734 GGTGTAGAACTTTTCCCGACTATG 59.131 45.833 0.00 0.00 0.00 2.23
2518 2966 7.333672 GTGTAGAACTTTTCCCGACTATGATTT 59.666 37.037 0.00 0.00 0.00 2.17
2519 2967 7.881232 TGTAGAACTTTTCCCGACTATGATTTT 59.119 33.333 0.00 0.00 0.00 1.82
2521 2969 8.857694 AGAACTTTTCCCGACTATGATTTTTA 57.142 30.769 0.00 0.00 0.00 1.52
2524 2972 9.855021 AACTTTTCCCGACTATGATTTTTAATG 57.145 29.630 0.00 0.00 0.00 1.90
2526 2974 9.855021 CTTTTCCCGACTATGATTTTTAATGTT 57.145 29.630 0.00 0.00 0.00 2.71
2529 2977 8.149973 TCCCGACTATGATTTTTAATGTTAGC 57.850 34.615 0.00 0.00 0.00 3.09
2531 2979 8.621286 CCCGACTATGATTTTTAATGTTAGCTT 58.379 33.333 0.00 0.00 0.00 3.74
2547 2995 9.618890 AATGTTAGCTTAATCATCATGTGTACT 57.381 29.630 0.00 0.00 0.00 2.73
2548 2996 9.618890 ATGTTAGCTTAATCATCATGTGTACTT 57.381 29.630 0.00 0.00 0.00 2.24
2553 3001 9.618890 AGCTTAATCATCATGTGTACTTACATT 57.381 29.630 0.00 0.00 39.17 2.71
2563 3011 9.606631 TCATGTGTACTTACATTACATTATGCA 57.393 29.630 0.00 0.00 39.17 3.96
2583 3031 0.679002 ATGTTGCAGCTGTAGCAGGG 60.679 55.000 23.92 0.00 43.75 4.45
2724 3172 2.042979 AGCTCTGTTCCTTCTCCTCTCT 59.957 50.000 0.00 0.00 0.00 3.10
2901 3349 0.108138 ATTCACGAGCACTAGCCACC 60.108 55.000 0.00 0.00 43.56 4.61
2955 3403 2.587889 GCAGCGTTAGGCCCCTTA 59.412 61.111 0.00 0.00 45.17 2.69
2961 3409 0.899720 CGTTAGGCCCCTTACTGACA 59.100 55.000 0.00 0.00 0.00 3.58
3009 3457 4.139786 ACAGTGTGTTCTTCATGCTGATT 58.860 39.130 0.00 0.00 35.88 2.57
3027 3475 3.202818 TGATTGTGTCCATATCCCTTGCT 59.797 43.478 0.00 0.00 0.00 3.91
3197 3647 8.764287 CATTTCTTGGTTCTTGTAAATTGGTTC 58.236 33.333 0.00 0.00 0.00 3.62
3268 3719 9.638239 GATACAAATGTTCCTTTTCTATTTGCA 57.362 29.630 0.00 0.00 40.54 4.08
3285 3736 3.101643 TGCACCATAGTACCTCTCAGT 57.898 47.619 0.00 0.00 0.00 3.41
3302 3753 7.996098 CTCTCAGTAAGGGGATTAAACAAAA 57.004 36.000 0.00 0.00 0.00 2.44
3303 3754 7.754851 TCTCAGTAAGGGGATTAAACAAAAC 57.245 36.000 0.00 0.00 0.00 2.43
3304 3755 7.291566 TCTCAGTAAGGGGATTAAACAAAACA 58.708 34.615 0.00 0.00 0.00 2.83
3305 3756 7.947890 TCTCAGTAAGGGGATTAAACAAAACAT 59.052 33.333 0.00 0.00 0.00 2.71
3306 3757 8.117813 TCAGTAAGGGGATTAAACAAAACATC 57.882 34.615 0.00 0.00 0.00 3.06
3307 3758 7.726291 TCAGTAAGGGGATTAAACAAAACATCA 59.274 33.333 0.00 0.00 0.00 3.07
3308 3759 7.812669 CAGTAAGGGGATTAAACAAAACATCAC 59.187 37.037 0.00 0.00 0.00 3.06
3309 3760 5.738619 AGGGGATTAAACAAAACATCACC 57.261 39.130 0.00 0.00 39.26 4.02
3310 3761 5.151454 AGGGGATTAAACAAAACATCACCA 58.849 37.500 2.24 0.00 41.16 4.17
3311 3762 5.784906 AGGGGATTAAACAAAACATCACCAT 59.215 36.000 2.24 0.00 41.16 3.55
3312 3763 5.874261 GGGGATTAAACAAAACATCACCATG 59.126 40.000 0.00 0.00 38.86 3.66
3313 3764 5.874261 GGGATTAAACAAAACATCACCATGG 59.126 40.000 11.19 11.19 33.82 3.66
3314 3765 5.351189 GGATTAAACAAAACATCACCATGGC 59.649 40.000 13.04 0.00 33.82 4.40
3315 3766 3.834489 AAACAAAACATCACCATGGCA 57.166 38.095 13.04 0.00 33.82 4.92
3316 3767 4.354893 AAACAAAACATCACCATGGCAT 57.645 36.364 13.04 0.43 33.82 4.40
3317 3768 3.598019 ACAAAACATCACCATGGCATC 57.402 42.857 13.04 0.00 33.82 3.91
3327 3778 0.602562 CCATGGCATCCGTGTTTGTT 59.397 50.000 0.00 0.00 38.76 2.83
3328 3779 1.402720 CCATGGCATCCGTGTTTGTTC 60.403 52.381 0.00 0.00 38.76 3.18
3337 3788 2.948979 TCCGTGTTTGTTCTGATTGCTT 59.051 40.909 0.00 0.00 0.00 3.91
3338 3789 4.130857 TCCGTGTTTGTTCTGATTGCTTA 58.869 39.130 0.00 0.00 0.00 3.09
3339 3790 4.759693 TCCGTGTTTGTTCTGATTGCTTAT 59.240 37.500 0.00 0.00 0.00 1.73
3340 3791 5.240623 TCCGTGTTTGTTCTGATTGCTTATT 59.759 36.000 0.00 0.00 0.00 1.40
3341 3792 5.343058 CCGTGTTTGTTCTGATTGCTTATTG 59.657 40.000 0.00 0.00 0.00 1.90
3342 3793 5.164158 CGTGTTTGTTCTGATTGCTTATTGC 60.164 40.000 0.00 0.00 43.25 3.56
3343 3794 5.922544 GTGTTTGTTCTGATTGCTTATTGCT 59.077 36.000 0.00 0.00 43.37 3.91
3344 3795 6.421801 GTGTTTGTTCTGATTGCTTATTGCTT 59.578 34.615 0.00 0.00 43.37 3.91
3345 3796 6.985645 TGTTTGTTCTGATTGCTTATTGCTTT 59.014 30.769 0.00 0.00 43.37 3.51
3346 3797 7.495279 TGTTTGTTCTGATTGCTTATTGCTTTT 59.505 29.630 0.00 0.00 43.37 2.27
3347 3798 7.642071 TTGTTCTGATTGCTTATTGCTTTTC 57.358 32.000 0.00 0.00 43.37 2.29
3348 3799 6.158598 TGTTCTGATTGCTTATTGCTTTTCC 58.841 36.000 0.00 0.00 43.37 3.13
3349 3800 5.981088 TCTGATTGCTTATTGCTTTTCCA 57.019 34.783 0.00 0.00 43.37 3.53
3350 3801 5.713025 TCTGATTGCTTATTGCTTTTCCAC 58.287 37.500 0.00 0.00 43.37 4.02
3351 3802 5.477984 TCTGATTGCTTATTGCTTTTCCACT 59.522 36.000 0.00 0.00 43.37 4.00
3352 3803 6.015180 TCTGATTGCTTATTGCTTTTCCACTT 60.015 34.615 0.00 0.00 43.37 3.16
3353 3804 5.927689 TGATTGCTTATTGCTTTTCCACTTG 59.072 36.000 0.00 0.00 43.37 3.16
3354 3805 4.935352 TGCTTATTGCTTTTCCACTTGT 57.065 36.364 0.00 0.00 43.37 3.16
3355 3806 6.398234 TTGCTTATTGCTTTTCCACTTGTA 57.602 33.333 0.00 0.00 43.37 2.41
3356 3807 6.588719 TGCTTATTGCTTTTCCACTTGTAT 57.411 33.333 0.00 0.00 43.37 2.29
3403 3854 2.417933 CTGTGTGCAAAGTATGAGCCTC 59.582 50.000 0.00 0.00 0.00 4.70
3405 3856 0.375106 GTGCAAAGTATGAGCCTCGC 59.625 55.000 0.00 0.00 0.00 5.03
3408 3859 0.815615 CAAAGTATGAGCCTCGCCCC 60.816 60.000 0.00 0.00 0.00 5.80
3411 3862 2.762459 TATGAGCCTCGCCCCGTT 60.762 61.111 0.00 0.00 0.00 4.44
3426 3877 2.428171 CCCCGTTGCATGATCTTGAAAT 59.572 45.455 12.54 0.00 0.00 2.17
3427 3878 3.631686 CCCCGTTGCATGATCTTGAAATA 59.368 43.478 12.54 0.00 0.00 1.40
3428 3879 4.279169 CCCCGTTGCATGATCTTGAAATAT 59.721 41.667 12.54 0.00 0.00 1.28
3429 3880 5.455392 CCCGTTGCATGATCTTGAAATATC 58.545 41.667 12.54 0.00 0.00 1.63
3430 3881 5.008911 CCCGTTGCATGATCTTGAAATATCA 59.991 40.000 12.54 0.00 36.60 2.15
3431 3882 6.140786 CCGTTGCATGATCTTGAAATATCAG 58.859 40.000 12.54 0.45 36.78 2.90
3432 3883 6.140786 CGTTGCATGATCTTGAAATATCAGG 58.859 40.000 12.54 0.00 36.78 3.86
3433 3884 6.017687 CGTTGCATGATCTTGAAATATCAGGA 60.018 38.462 12.54 0.00 44.63 3.86
3434 3885 6.872628 TGCATGATCTTGAAATATCAGGAC 57.127 37.500 12.54 1.24 43.51 3.85
3435 3886 6.598503 TGCATGATCTTGAAATATCAGGACT 58.401 36.000 12.54 0.00 43.51 3.85
3436 3887 7.058525 TGCATGATCTTGAAATATCAGGACTT 58.941 34.615 12.54 0.00 43.51 3.01
3437 3888 7.012989 TGCATGATCTTGAAATATCAGGACTTG 59.987 37.037 12.54 0.00 43.51 3.16
3438 3889 7.013083 GCATGATCTTGAAATATCAGGACTTGT 59.987 37.037 12.54 0.00 43.51 3.16
3439 3890 9.551734 CATGATCTTGAAATATCAGGACTTGTA 57.448 33.333 2.43 0.00 43.51 2.41
3440 3891 8.948631 TGATCTTGAAATATCAGGACTTGTAC 57.051 34.615 0.00 0.00 43.51 2.90
3441 3892 8.539544 TGATCTTGAAATATCAGGACTTGTACA 58.460 33.333 0.00 0.00 43.51 2.90
3442 3893 9.383519 GATCTTGAAATATCAGGACTTGTACAA 57.616 33.333 8.28 8.28 43.51 2.41
3443 3894 9.911788 ATCTTGAAATATCAGGACTTGTACAAT 57.088 29.630 9.13 0.00 43.51 2.71
3444 3895 9.166173 TCTTGAAATATCAGGACTTGTACAATG 57.834 33.333 9.13 4.65 36.81 2.82
3445 3896 7.864108 TGAAATATCAGGACTTGTACAATGG 57.136 36.000 9.13 0.68 0.00 3.16
3446 3897 6.318648 TGAAATATCAGGACTTGTACAATGGC 59.681 38.462 9.13 5.60 0.00 4.40
3447 3898 3.719268 ATCAGGACTTGTACAATGGCA 57.281 42.857 9.13 0.00 0.00 4.92
3448 3899 3.500448 TCAGGACTTGTACAATGGCAA 57.500 42.857 9.13 0.00 0.00 4.52
3449 3900 4.032960 TCAGGACTTGTACAATGGCAAT 57.967 40.909 9.13 0.00 0.00 3.56
3450 3901 3.758023 TCAGGACTTGTACAATGGCAATG 59.242 43.478 9.13 0.00 0.00 2.82
3451 3902 3.758023 CAGGACTTGTACAATGGCAATGA 59.242 43.478 10.01 0.00 0.00 2.57
3477 3928 2.412089 GCGTCAACCATGTTCTAGTCAC 59.588 50.000 0.00 0.00 0.00 3.67
3519 3970 2.304470 GAGGAGCAGAGAAGTTTCCCTT 59.696 50.000 0.00 0.00 35.59 3.95
3644 4096 8.280497 CACTAGAAAGTTGTATTAAAACTGCGT 58.720 33.333 0.00 0.00 37.90 5.24
3670 4122 6.704056 ATTAATTTGGATCGGAGGGAGTAT 57.296 37.500 0.00 0.00 0.00 2.12
3672 4124 2.767644 TTGGATCGGAGGGAGTATCA 57.232 50.000 0.00 0.00 36.25 2.15
3674 4126 4.397919 TTGGATCGGAGGGAGTATCATA 57.602 45.455 0.00 0.00 36.25 2.15
3867 4319 4.382320 GCCCGTAACGCCCTGTCA 62.382 66.667 0.00 0.00 0.00 3.58
3868 4320 2.582436 CCCGTAACGCCCTGTCAT 59.418 61.111 0.00 0.00 0.00 3.06
3869 4321 1.520787 CCCGTAACGCCCTGTCATC 60.521 63.158 0.00 0.00 0.00 2.92
3870 4322 1.520787 CCGTAACGCCCTGTCATCC 60.521 63.158 0.00 0.00 0.00 3.51
3871 4323 1.216977 CGTAACGCCCTGTCATCCA 59.783 57.895 0.00 0.00 0.00 3.41
3872 4324 0.806102 CGTAACGCCCTGTCATCCAG 60.806 60.000 0.00 0.00 41.15 3.86
3873 4325 0.249398 GTAACGCCCTGTCATCCAGT 59.751 55.000 0.00 0.00 39.74 4.00
3874 4326 0.249120 TAACGCCCTGTCATCCAGTG 59.751 55.000 0.00 0.00 39.74 3.66
3875 4327 2.821366 CGCCCTGTCATCCAGTGC 60.821 66.667 0.00 0.00 40.73 4.40
3876 4328 2.439156 GCCCTGTCATCCAGTGCC 60.439 66.667 0.00 0.00 38.48 5.01
3877 4329 2.124983 CCCTGTCATCCAGTGCCG 60.125 66.667 0.00 0.00 39.74 5.69
3878 4330 2.821366 CCTGTCATCCAGTGCCGC 60.821 66.667 0.00 0.00 39.74 6.53
3879 4331 2.046988 CTGTCATCCAGTGCCGCA 60.047 61.111 0.00 0.00 36.37 5.69
3880 4332 1.450848 CTGTCATCCAGTGCCGCAT 60.451 57.895 0.00 0.00 36.37 4.73
3881 4333 0.179076 CTGTCATCCAGTGCCGCATA 60.179 55.000 0.00 0.00 36.37 3.14
3882 4334 0.461870 TGTCATCCAGTGCCGCATAC 60.462 55.000 0.00 0.00 0.00 2.39
3883 4335 0.461870 GTCATCCAGTGCCGCATACA 60.462 55.000 0.00 0.00 0.00 2.29
3884 4336 0.179076 TCATCCAGTGCCGCATACAG 60.179 55.000 0.00 0.00 0.00 2.74
3885 4337 0.179076 CATCCAGTGCCGCATACAGA 60.179 55.000 0.00 0.00 0.00 3.41
3886 4338 0.179073 ATCCAGTGCCGCATACAGAC 60.179 55.000 0.00 0.00 0.00 3.51
3887 4339 1.219124 CCAGTGCCGCATACAGACT 59.781 57.895 0.00 0.00 0.00 3.24
3888 4340 1.086067 CCAGTGCCGCATACAGACTG 61.086 60.000 0.00 0.00 34.95 3.51
3889 4341 1.448540 AGTGCCGCATACAGACTGC 60.449 57.895 1.25 0.00 36.26 4.40
3890 4342 1.448540 GTGCCGCATACAGACTGCT 60.449 57.895 1.25 0.00 37.48 4.24
3900 4352 1.656441 CAGACTGCTGTGGTTTGGC 59.344 57.895 0.00 0.00 37.37 4.52
3901 4353 1.893808 AGACTGCTGTGGTTTGGCG 60.894 57.895 0.00 0.00 0.00 5.69
3902 4354 2.906897 ACTGCTGTGGTTTGGCGG 60.907 61.111 0.00 0.00 38.21 6.13
3903 4355 3.673484 CTGCTGTGGTTTGGCGGG 61.673 66.667 0.00 0.00 0.00 6.13
3927 4379 3.869272 GCTGGCTTCGCGGACATG 61.869 66.667 6.13 0.00 0.00 3.21
3928 4380 2.125552 CTGGCTTCGCGGACATGA 60.126 61.111 6.13 0.00 0.00 3.07
3929 4381 1.522355 CTGGCTTCGCGGACATGAT 60.522 57.895 6.13 0.00 0.00 2.45
3930 4382 1.493950 CTGGCTTCGCGGACATGATC 61.494 60.000 6.13 0.00 0.00 2.92
3931 4383 2.247437 GGCTTCGCGGACATGATCC 61.247 63.158 6.13 1.69 45.20 3.36
3970 4422 2.325509 GCGTGTGCGGTTTTCTATTT 57.674 45.000 0.00 0.00 38.78 1.40
3971 4423 1.976045 GCGTGTGCGGTTTTCTATTTG 59.024 47.619 0.00 0.00 38.78 2.32
3972 4424 1.976045 CGTGTGCGGTTTTCTATTTGC 59.024 47.619 0.00 0.00 0.00 3.68
3973 4425 2.603412 CGTGTGCGGTTTTCTATTTGCA 60.603 45.455 0.00 0.00 0.00 4.08
3975 4427 2.324860 GTGCGGTTTTCTATTTGCACC 58.675 47.619 3.90 0.00 45.07 5.01
3976 4428 1.957177 TGCGGTTTTCTATTTGCACCA 59.043 42.857 0.00 0.00 0.00 4.17
3977 4429 2.560542 TGCGGTTTTCTATTTGCACCAT 59.439 40.909 0.00 0.00 0.00 3.55
3978 4430 3.759086 TGCGGTTTTCTATTTGCACCATA 59.241 39.130 0.00 0.00 0.00 2.74
3979 4431 4.142491 TGCGGTTTTCTATTTGCACCATAG 60.142 41.667 5.93 5.93 0.00 2.23
3980 4432 4.142469 GCGGTTTTCTATTTGCACCATAGT 60.142 41.667 10.57 0.00 0.00 2.12
3981 4433 5.065474 GCGGTTTTCTATTTGCACCATAGTA 59.935 40.000 10.57 1.15 0.00 1.82
3982 4434 6.403855 GCGGTTTTCTATTTGCACCATAGTAA 60.404 38.462 10.57 6.18 0.00 2.24
3983 4435 6.964934 CGGTTTTCTATTTGCACCATAGTAAC 59.035 38.462 10.57 13.49 0.00 2.50
3984 4436 7.361371 CGGTTTTCTATTTGCACCATAGTAACA 60.361 37.037 20.01 7.71 30.22 2.41
3985 4437 8.466798 GGTTTTCTATTTGCACCATAGTAACAT 58.533 33.333 20.01 0.00 30.22 2.71
3989 4441 9.674068 TTCTATTTGCACCATAGTAACATAACA 57.326 29.630 10.57 0.00 0.00 2.41
3990 4442 9.845740 TCTATTTGCACCATAGTAACATAACAT 57.154 29.630 10.57 0.00 0.00 2.71
3992 4444 7.929941 TTTGCACCATAGTAACATAACATCA 57.070 32.000 0.00 0.00 0.00 3.07
3993 4445 6.918892 TGCACCATAGTAACATAACATCAC 57.081 37.500 0.00 0.00 0.00 3.06
3994 4446 5.820423 TGCACCATAGTAACATAACATCACC 59.180 40.000 0.00 0.00 0.00 4.02
3995 4447 5.820423 GCACCATAGTAACATAACATCACCA 59.180 40.000 0.00 0.00 0.00 4.17
3996 4448 6.486657 GCACCATAGTAACATAACATCACCAT 59.513 38.462 0.00 0.00 0.00 3.55
3997 4449 7.520453 GCACCATAGTAACATAACATCACCATG 60.520 40.741 0.00 0.00 35.92 3.66
3998 4450 6.998074 ACCATAGTAACATAACATCACCATGG 59.002 38.462 11.19 11.19 33.82 3.66
3999 4451 6.072508 CCATAGTAACATAACATCACCATGGC 60.073 42.308 13.04 0.00 33.82 4.40
4000 4452 4.854173 AGTAACATAACATCACCATGGCA 58.146 39.130 13.04 0.00 33.82 4.92
4001 4453 5.448654 AGTAACATAACATCACCATGGCAT 58.551 37.500 13.04 0.43 33.82 4.40
4002 4454 4.924305 AACATAACATCACCATGGCATC 57.076 40.909 13.04 0.00 33.82 3.91
4003 4455 3.225104 ACATAACATCACCATGGCATCC 58.775 45.455 13.04 0.00 33.82 3.51
4004 4456 1.965935 TAACATCACCATGGCATCCG 58.034 50.000 13.04 0.00 33.82 4.18
4005 4457 0.034186 AACATCACCATGGCATCCGT 60.034 50.000 13.04 0.00 33.82 4.69
4006 4458 0.749091 ACATCACCATGGCATCCGTG 60.749 55.000 13.04 15.07 40.02 4.94
4007 4459 0.749091 CATCACCATGGCATCCGTGT 60.749 55.000 13.04 8.10 38.76 4.49
4008 4460 0.034186 ATCACCATGGCATCCGTGTT 60.034 50.000 13.04 11.22 38.76 3.32
4009 4461 0.251121 TCACCATGGCATCCGTGTTT 60.251 50.000 13.04 0.00 38.76 2.83
4010 4462 0.109179 CACCATGGCATCCGTGTTTG 60.109 55.000 13.04 0.00 38.76 2.93
4011 4463 0.539438 ACCATGGCATCCGTGTTTGT 60.539 50.000 13.04 0.00 38.76 2.83
4012 4464 0.109179 CCATGGCATCCGTGTTTGTG 60.109 55.000 0.00 0.00 38.76 3.33
4013 4465 0.109179 CATGGCATCCGTGTTTGTGG 60.109 55.000 0.00 0.00 35.92 4.17
4014 4466 0.539438 ATGGCATCCGTGTTTGTGGT 60.539 50.000 0.00 0.00 0.00 4.16
4015 4467 1.285641 GGCATCCGTGTTTGTGGTG 59.714 57.895 0.00 0.00 0.00 4.17
4016 4468 1.169661 GGCATCCGTGTTTGTGGTGA 61.170 55.000 0.00 0.00 0.00 4.02
4017 4469 0.881118 GCATCCGTGTTTGTGGTGAT 59.119 50.000 0.00 0.00 0.00 3.06
4018 4470 1.269448 GCATCCGTGTTTGTGGTGATT 59.731 47.619 0.00 0.00 0.00 2.57
4019 4471 2.921912 GCATCCGTGTTTGTGGTGATTG 60.922 50.000 0.00 0.00 0.00 2.67
4020 4472 0.665835 TCCGTGTTTGTGGTGATTGC 59.334 50.000 0.00 0.00 0.00 3.56
4021 4473 0.667993 CCGTGTTTGTGGTGATTGCT 59.332 50.000 0.00 0.00 0.00 3.91
4022 4474 1.066908 CCGTGTTTGTGGTGATTGCTT 59.933 47.619 0.00 0.00 0.00 3.91
4023 4475 2.292016 CCGTGTTTGTGGTGATTGCTTA 59.708 45.455 0.00 0.00 0.00 3.09
4024 4476 3.057596 CCGTGTTTGTGGTGATTGCTTAT 60.058 43.478 0.00 0.00 0.00 1.73
4025 4477 4.545610 CGTGTTTGTGGTGATTGCTTATT 58.454 39.130 0.00 0.00 0.00 1.40
4026 4478 4.616802 CGTGTTTGTGGTGATTGCTTATTC 59.383 41.667 0.00 0.00 0.00 1.75
4027 4479 4.923281 GTGTTTGTGGTGATTGCTTATTCC 59.077 41.667 0.00 0.00 0.00 3.01
4028 4480 4.832266 TGTTTGTGGTGATTGCTTATTCCT 59.168 37.500 0.00 0.00 0.00 3.36
4029 4481 5.304101 TGTTTGTGGTGATTGCTTATTCCTT 59.696 36.000 0.00 0.00 0.00 3.36
4030 4482 5.643379 TTGTGGTGATTGCTTATTCCTTC 57.357 39.130 0.00 0.00 0.00 3.46
4031 4483 4.922206 TGTGGTGATTGCTTATTCCTTCT 58.078 39.130 0.00 0.00 0.00 2.85
4032 4484 4.943705 TGTGGTGATTGCTTATTCCTTCTC 59.056 41.667 0.00 0.00 0.00 2.87
4033 4485 4.336713 GTGGTGATTGCTTATTCCTTCTCC 59.663 45.833 0.00 0.00 0.00 3.71
4034 4486 4.018506 TGGTGATTGCTTATTCCTTCTCCA 60.019 41.667 0.00 0.00 0.00 3.86
4035 4487 4.578105 GGTGATTGCTTATTCCTTCTCCAG 59.422 45.833 0.00 0.00 0.00 3.86
4036 4488 5.189180 GTGATTGCTTATTCCTTCTCCAGT 58.811 41.667 0.00 0.00 0.00 4.00
4037 4489 5.649831 GTGATTGCTTATTCCTTCTCCAGTT 59.350 40.000 0.00 0.00 0.00 3.16
4038 4490 5.649395 TGATTGCTTATTCCTTCTCCAGTTG 59.351 40.000 0.00 0.00 0.00 3.16
4039 4491 4.640771 TGCTTATTCCTTCTCCAGTTGT 57.359 40.909 0.00 0.00 0.00 3.32
4040 4492 5.755409 TGCTTATTCCTTCTCCAGTTGTA 57.245 39.130 0.00 0.00 0.00 2.41
4041 4493 5.734720 TGCTTATTCCTTCTCCAGTTGTAG 58.265 41.667 0.00 0.00 0.00 2.74
4042 4494 5.483937 TGCTTATTCCTTCTCCAGTTGTAGA 59.516 40.000 0.00 0.00 0.00 2.59
4043 4495 6.156949 TGCTTATTCCTTCTCCAGTTGTAGAT 59.843 38.462 0.00 0.00 0.00 1.98
4044 4496 7.051000 GCTTATTCCTTCTCCAGTTGTAGATT 58.949 38.462 0.00 0.00 0.00 2.40
4045 4497 7.011857 GCTTATTCCTTCTCCAGTTGTAGATTG 59.988 40.741 0.00 0.00 0.00 2.67
4046 4498 5.825593 TTCCTTCTCCAGTTGTAGATTGT 57.174 39.130 0.00 0.00 0.00 2.71
4047 4499 5.825593 TCCTTCTCCAGTTGTAGATTGTT 57.174 39.130 0.00 0.00 0.00 2.83
4048 4500 5.794894 TCCTTCTCCAGTTGTAGATTGTTC 58.205 41.667 0.00 0.00 0.00 3.18
4049 4501 5.306937 TCCTTCTCCAGTTGTAGATTGTTCA 59.693 40.000 0.00 0.00 0.00 3.18
4050 4502 5.997746 CCTTCTCCAGTTGTAGATTGTTCAA 59.002 40.000 0.00 0.00 0.00 2.69
4051 4503 6.073003 CCTTCTCCAGTTGTAGATTGTTCAAC 60.073 42.308 0.00 0.00 40.85 3.18
4056 4508 4.460263 AGTTGTAGATTGTTCAACTGCCA 58.540 39.130 5.24 0.00 46.23 4.92
4057 4509 4.887071 AGTTGTAGATTGTTCAACTGCCAA 59.113 37.500 5.24 0.00 46.23 4.52
4058 4510 5.359576 AGTTGTAGATTGTTCAACTGCCAAA 59.640 36.000 5.24 0.00 46.23 3.28
4059 4511 5.843673 TGTAGATTGTTCAACTGCCAAAA 57.156 34.783 0.00 0.00 0.00 2.44
4060 4512 5.830912 TGTAGATTGTTCAACTGCCAAAAG 58.169 37.500 0.00 0.00 0.00 2.27
4061 4513 5.592282 TGTAGATTGTTCAACTGCCAAAAGA 59.408 36.000 0.00 0.00 0.00 2.52
4062 4514 5.796424 AGATTGTTCAACTGCCAAAAGAT 57.204 34.783 0.00 0.00 0.00 2.40
4063 4515 6.165700 AGATTGTTCAACTGCCAAAAGATT 57.834 33.333 0.00 0.00 0.00 2.40
4064 4516 5.987347 AGATTGTTCAACTGCCAAAAGATTG 59.013 36.000 0.00 0.00 36.25 2.67
4065 4517 4.734398 TGTTCAACTGCCAAAAGATTGT 57.266 36.364 0.00 0.00 34.60 2.71
4066 4518 5.083533 TGTTCAACTGCCAAAAGATTGTT 57.916 34.783 0.00 0.00 34.60 2.83
4067 4519 4.869297 TGTTCAACTGCCAAAAGATTGTTG 59.131 37.500 0.00 0.00 36.93 3.33
4068 4520 4.734398 TCAACTGCCAAAAGATTGTTGT 57.266 36.364 0.00 0.00 36.93 3.32
4069 4521 4.431809 TCAACTGCCAAAAGATTGTTGTG 58.568 39.130 0.00 0.00 36.93 3.33
4070 4522 4.081752 TCAACTGCCAAAAGATTGTTGTGT 60.082 37.500 0.00 0.00 36.93 3.72
4071 4523 3.784338 ACTGCCAAAAGATTGTTGTGTG 58.216 40.909 0.00 0.00 34.60 3.82
4072 4524 2.540931 CTGCCAAAAGATTGTTGTGTGC 59.459 45.455 0.00 0.00 34.60 4.57
4073 4525 2.093816 TGCCAAAAGATTGTTGTGTGCA 60.094 40.909 0.00 0.00 34.60 4.57
4074 4526 2.935201 GCCAAAAGATTGTTGTGTGCAA 59.065 40.909 0.00 0.00 34.60 4.08
4075 4527 3.373439 GCCAAAAGATTGTTGTGTGCAAA 59.627 39.130 0.00 0.00 36.22 3.68
4076 4528 4.494526 GCCAAAAGATTGTTGTGTGCAAAG 60.495 41.667 0.00 0.00 36.22 2.77
4077 4529 4.494526 CCAAAAGATTGTTGTGTGCAAAGC 60.495 41.667 0.00 0.00 36.22 3.51
4078 4530 3.523606 AAGATTGTTGTGTGCAAAGCA 57.476 38.095 0.00 0.00 36.22 3.91
4079 4531 3.523606 AGATTGTTGTGTGCAAAGCAA 57.476 38.095 0.00 0.00 41.47 3.91
4080 4532 4.062677 AGATTGTTGTGTGCAAAGCAAT 57.937 36.364 4.47 4.47 41.47 3.56
4081 4533 3.805422 AGATTGTTGTGTGCAAAGCAATG 59.195 39.130 8.77 0.00 41.47 2.82
4082 4534 2.669300 TGTTGTGTGCAAAGCAATGT 57.331 40.000 0.00 0.00 41.47 2.71
4083 4535 2.969990 TGTTGTGTGCAAAGCAATGTT 58.030 38.095 0.00 0.00 41.47 2.71
4084 4536 2.928757 TGTTGTGTGCAAAGCAATGTTC 59.071 40.909 0.00 0.00 41.47 3.18
4085 4537 2.928757 GTTGTGTGCAAAGCAATGTTCA 59.071 40.909 0.00 0.00 41.47 3.18
4086 4538 2.811855 TGTGTGCAAAGCAATGTTCAG 58.188 42.857 0.00 0.00 41.47 3.02
4087 4539 2.129607 GTGTGCAAAGCAATGTTCAGG 58.870 47.619 0.00 0.00 41.47 3.86
4088 4540 2.030371 TGTGCAAAGCAATGTTCAGGA 58.970 42.857 0.00 0.00 41.47 3.86
4089 4541 2.629137 TGTGCAAAGCAATGTTCAGGAT 59.371 40.909 0.00 0.00 41.47 3.24
4090 4542 3.825585 TGTGCAAAGCAATGTTCAGGATA 59.174 39.130 0.00 0.00 41.47 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 1.268352 TGGTTTTGCTTCCGGATTTCG 59.732 47.619 4.15 0.00 38.88 3.46
41 42 3.434984 TGTTTTTGCACTGGTTTTGCTTC 59.565 39.130 0.00 0.00 40.86 3.86
46 47 4.999950 TCATGTTGTTTTTGCACTGGTTTT 59.000 33.333 0.00 0.00 0.00 2.43
51 52 4.682860 GGAGATCATGTTGTTTTTGCACTG 59.317 41.667 0.00 0.00 0.00 3.66
66 67 6.437477 TGTGTGACTGTAACTAAGGAGATCAT 59.563 38.462 0.00 0.00 0.00 2.45
74 75 9.684448 CATCCTATATGTGTGACTGTAACTAAG 57.316 37.037 0.00 0.00 0.00 2.18
97 98 7.987458 TCCATTGTAATTCTCACCTAAGACATC 59.013 37.037 0.00 0.00 0.00 3.06
205 206 2.143925 GTCCGTGACTTTTCTGAAGGG 58.856 52.381 0.00 0.00 0.00 3.95
206 207 2.544267 GTGTCCGTGACTTTTCTGAAGG 59.456 50.000 5.77 0.00 33.15 3.46
223 224 6.554334 TTGTCTTGCCTAAAATACAGTGTC 57.446 37.500 0.00 0.00 0.00 3.67
332 336 6.071616 GGGCAAATTCTTTCTATACAACCACA 60.072 38.462 0.00 0.00 0.00 4.17
344 349 5.693555 CACTTCTTGAAGGGCAAATTCTTTC 59.306 40.000 13.97 0.00 35.74 2.62
351 356 7.012327 CGAATATATCACTTCTTGAAGGGCAAA 59.988 37.037 13.97 0.81 37.92 3.68
376 381 1.739067 AAGCTAAGCAAGTAAGGGCG 58.261 50.000 0.00 0.00 34.54 6.13
387 392 8.202745 ACAAAGATCATTAGTGTAAGCTAAGC 57.797 34.615 0.00 0.00 34.83 3.09
437 442 5.159273 TGTGTAGGTGAAGTGATTATGCA 57.841 39.130 0.00 0.00 0.00 3.96
440 445 5.648092 GCCTTTGTGTAGGTGAAGTGATTAT 59.352 40.000 0.00 0.00 37.63 1.28
485 490 5.221224 TGTTGTTGATTTTGGCCTCTAACAG 60.221 40.000 3.32 0.00 0.00 3.16
531 536 6.464895 AAAATGTCGGCATAACAAAATGTG 57.535 33.333 1.27 0.00 34.39 3.21
554 559 9.920946 AGTCCTAAATGCATATAAAAGAGGAAA 57.079 29.630 0.00 0.00 32.56 3.13
557 562 9.566432 AAGAGTCCTAAATGCATATAAAAGAGG 57.434 33.333 0.00 0.00 0.00 3.69
565 570 6.471146 CCAGCTAAGAGTCCTAAATGCATAT 58.529 40.000 0.00 0.00 0.00 1.78
567 572 4.712476 CCAGCTAAGAGTCCTAAATGCAT 58.288 43.478 0.00 0.00 0.00 3.96
569 574 2.875317 GCCAGCTAAGAGTCCTAAATGC 59.125 50.000 0.00 0.00 0.00 3.56
570 575 3.126831 CGCCAGCTAAGAGTCCTAAATG 58.873 50.000 0.00 0.00 0.00 2.32
572 577 2.453521 TCGCCAGCTAAGAGTCCTAAA 58.546 47.619 0.00 0.00 0.00 1.85
574 579 2.139323 TTCGCCAGCTAAGAGTCCTA 57.861 50.000 0.00 0.00 0.00 2.94
576 581 1.134670 ACATTCGCCAGCTAAGAGTCC 60.135 52.381 0.00 0.00 0.00 3.85
594 650 0.895530 CCACTCCCTTCTAGCGAACA 59.104 55.000 0.00 0.00 0.00 3.18
602 658 0.984230 TCGAAATGCCACTCCCTTCT 59.016 50.000 0.00 0.00 0.00 2.85
609 665 3.915437 AAAATCGTTCGAAATGCCACT 57.085 38.095 0.00 0.00 0.00 4.00
629 686 5.394883 CCCCTCGCAACTAAAACTATCAGTA 60.395 44.000 0.00 0.00 0.00 2.74
634 691 3.994931 ACCCCTCGCAACTAAAACTAT 57.005 42.857 0.00 0.00 0.00 2.12
647 704 2.143925 GAAGAAGTTGTCAACCCCTCG 58.856 52.381 12.17 0.00 0.00 4.63
668 725 3.068024 TCAAGAAACTGCCATGTTGTTCC 59.932 43.478 0.00 0.00 0.00 3.62
669 726 4.036734 TCTCAAGAAACTGCCATGTTGTTC 59.963 41.667 0.00 0.00 0.00 3.18
679 736 5.938438 ATGTCTTCTTCTCAAGAAACTGC 57.062 39.130 0.61 0.00 46.13 4.40
694 751 6.036191 TGGCGGTTTTAAACAAAAATGTCTTC 59.964 34.615 10.14 0.00 39.22 2.87
697 754 5.494618 GTGGCGGTTTTAAACAAAAATGTC 58.505 37.500 10.14 0.00 39.22 3.06
698 755 4.333095 GGTGGCGGTTTTAAACAAAAATGT 59.667 37.500 10.14 0.00 39.22 2.71
699 756 4.551024 CGGTGGCGGTTTTAAACAAAAATG 60.551 41.667 10.14 0.00 39.22 2.32
712 771 0.312729 GAAATCAAACGGTGGCGGTT 59.687 50.000 0.00 0.00 0.00 4.44
713 772 0.820074 TGAAATCAAACGGTGGCGGT 60.820 50.000 0.00 0.00 0.00 5.68
714 773 0.525761 ATGAAATCAAACGGTGGCGG 59.474 50.000 0.00 0.00 0.00 6.13
715 774 1.198867 TCATGAAATCAAACGGTGGCG 59.801 47.619 0.00 0.00 0.00 5.69
716 775 3.244976 CTTCATGAAATCAAACGGTGGC 58.755 45.455 9.88 0.00 0.00 5.01
717 776 3.244976 GCTTCATGAAATCAAACGGTGG 58.755 45.455 9.88 0.00 0.00 4.61
718 777 3.899734 TGCTTCATGAAATCAAACGGTG 58.100 40.909 9.88 0.00 0.00 4.94
719 778 4.037923 ACTTGCTTCATGAAATCAAACGGT 59.962 37.500 17.96 12.42 0.00 4.83
720 779 4.549458 ACTTGCTTCATGAAATCAAACGG 58.451 39.130 17.96 11.98 0.00 4.44
721 780 7.621832 TTTACTTGCTTCATGAAATCAAACG 57.378 32.000 17.96 12.46 0.00 3.60
722 781 9.034544 ACTTTTACTTGCTTCATGAAATCAAAC 57.965 29.630 17.96 3.86 0.00 2.93
723 782 9.033481 CACTTTTACTTGCTTCATGAAATCAAA 57.967 29.630 17.96 8.03 0.00 2.69
724 783 7.169645 GCACTTTTACTTGCTTCATGAAATCAA 59.830 33.333 9.88 14.34 35.74 2.57
725 784 6.642131 GCACTTTTACTTGCTTCATGAAATCA 59.358 34.615 9.88 7.70 35.74 2.57
741 800 5.104562 ACGCTTTTTCCTAGCACTTTTAC 57.895 39.130 0.00 0.00 38.55 2.01
747 806 1.724973 GCGAACGCTTTTTCCTAGCAC 60.725 52.381 11.97 0.00 38.55 4.40
749 811 3.291699 GCGAACGCTTTTTCCTAGC 57.708 52.632 11.97 0.00 38.26 3.42
761 823 1.079127 AGGGGATGACAAGCGAACG 60.079 57.895 0.00 0.00 0.00 3.95
782 844 1.355971 TATTTGGCGAACGTCAGCTC 58.644 50.000 13.64 6.11 0.00 4.09
789 851 4.343811 TGGTAATGTTATTTGGCGAACG 57.656 40.909 0.00 0.00 0.00 3.95
876 941 0.112606 TGACGACTGGGAGGAGAAGT 59.887 55.000 0.00 0.00 0.00 3.01
877 942 1.479709 ATGACGACTGGGAGGAGAAG 58.520 55.000 0.00 0.00 0.00 2.85
878 943 1.938585 AATGACGACTGGGAGGAGAA 58.061 50.000 0.00 0.00 0.00 2.87
895 960 2.038952 GGCAGGCAAAGGGAAGAAAAAT 59.961 45.455 0.00 0.00 0.00 1.82
898 966 0.188342 AGGCAGGCAAAGGGAAGAAA 59.812 50.000 0.00 0.00 0.00 2.52
916 984 2.503061 CGAGGTGGGATCTGGCAG 59.497 66.667 8.58 8.58 0.00 4.85
917 985 3.785859 GCGAGGTGGGATCTGGCA 61.786 66.667 0.00 0.00 36.26 4.92
992 1060 2.808206 GCGGGTTCCATCGGAGGAT 61.808 63.158 0.00 0.00 37.56 3.24
1497 1577 3.860605 CCCATGATGGTCCCGCGA 61.861 66.667 8.23 0.00 35.17 5.87
1587 1667 1.599797 CAAGAACGACCACCCCCAC 60.600 63.158 0.00 0.00 0.00 4.61
1599 1679 1.212751 GAATGCCGGCACCAAGAAC 59.787 57.895 35.50 13.91 0.00 3.01
1632 1712 2.776526 ACCAGCACCAGAACCCCA 60.777 61.111 0.00 0.00 0.00 4.96
1638 1718 0.179020 CCAAGAACACCAGCACCAGA 60.179 55.000 0.00 0.00 0.00 3.86
1681 1761 1.528542 CCATGGCATCCAGCTCCAG 60.529 63.158 0.00 0.00 44.79 3.86
1686 1766 1.076485 AACCTCCATGGCATCCAGC 60.076 57.895 6.96 0.00 44.65 4.85
1695 1775 3.220110 CCCATTCATCTCAACCTCCATG 58.780 50.000 0.00 0.00 0.00 3.66
1781 1867 4.019411 ACCCCATTTCCAATTCCAATTCAC 60.019 41.667 0.00 0.00 0.00 3.18
1851 1943 0.106708 ATGCATATTCCGCGACACCT 59.893 50.000 8.23 0.00 0.00 4.00
1952 2044 9.057089 AGCAGATAACAAAGTGGTAATATAAGC 57.943 33.333 0.00 0.00 0.00 3.09
1962 2088 2.350522 AGCGAGCAGATAACAAAGTGG 58.649 47.619 0.00 0.00 0.00 4.00
1966 2092 6.183360 CCAATAAGAAGCGAGCAGATAACAAA 60.183 38.462 0.00 0.00 0.00 2.83
1978 2104 7.011389 CAGATTATGTTGTCCAATAAGAAGCGA 59.989 37.037 0.00 0.00 0.00 4.93
1980 2106 6.914757 GCAGATTATGTTGTCCAATAAGAAGC 59.085 38.462 0.00 0.00 0.00 3.86
1981 2107 7.988737 TGCAGATTATGTTGTCCAATAAGAAG 58.011 34.615 0.00 0.00 0.00 2.85
1982 2108 7.936496 TGCAGATTATGTTGTCCAATAAGAA 57.064 32.000 0.00 0.00 0.00 2.52
1983 2109 8.523915 AATGCAGATTATGTTGTCCAATAAGA 57.476 30.769 0.00 0.00 0.00 2.10
2004 2269 3.307674 TCTTGATTGTGCACGAAAATGC 58.692 40.909 11.67 0.00 46.32 3.56
2007 2272 7.918033 TCTTAAATTCTTGATTGTGCACGAAAA 59.082 29.630 11.67 8.04 31.17 2.29
2010 2275 6.552859 TCTTAAATTCTTGATTGTGCACGA 57.447 33.333 9.77 9.77 0.00 4.35
2012 2277 7.008992 GCAGATCTTAAATTCTTGATTGTGCAC 59.991 37.037 10.75 10.75 33.35 4.57
2046 2311 9.206870 CCATTACATTGCATAAACAGAAGTTTT 57.793 29.630 0.00 0.00 45.32 2.43
2048 2313 7.322664 CCCATTACATTGCATAAACAGAAGTT 58.677 34.615 0.00 0.00 40.40 2.66
2049 2314 6.127366 CCCCATTACATTGCATAAACAGAAGT 60.127 38.462 0.00 0.00 0.00 3.01
2050 2315 6.275335 CCCCATTACATTGCATAAACAGAAG 58.725 40.000 0.00 0.00 0.00 2.85
2053 2318 4.099881 AGCCCCATTACATTGCATAAACAG 59.900 41.667 0.00 0.00 0.00 3.16
2055 2320 4.670896 AGCCCCATTACATTGCATAAAC 57.329 40.909 0.00 0.00 0.00 2.01
2057 2322 6.552725 TCAATTAGCCCCATTACATTGCATAA 59.447 34.615 0.00 0.00 0.00 1.90
2058 2323 6.073981 TCAATTAGCCCCATTACATTGCATA 58.926 36.000 0.00 0.00 0.00 3.14
2062 2479 6.266103 AGACATCAATTAGCCCCATTACATTG 59.734 38.462 0.00 0.00 0.00 2.82
2068 2485 5.653255 ACTAGACATCAATTAGCCCCATT 57.347 39.130 0.00 0.00 0.00 3.16
2090 2507 2.879103 AAGGCGATCCCTGAGAAAAA 57.121 45.000 3.77 0.00 45.62 1.94
2091 2508 2.879103 AAAGGCGATCCCTGAGAAAA 57.121 45.000 3.77 0.00 45.62 2.29
2092 2509 3.992943 TTAAAGGCGATCCCTGAGAAA 57.007 42.857 3.77 0.00 45.62 2.52
2097 2514 4.455606 AGAGAATTTAAAGGCGATCCCTG 58.544 43.478 3.77 0.00 45.62 4.45
2105 2522 6.989759 TGAAACCCAAAAGAGAATTTAAAGGC 59.010 34.615 0.00 0.00 0.00 4.35
2106 2523 9.559732 AATGAAACCCAAAAGAGAATTTAAAGG 57.440 29.630 0.00 0.00 0.00 3.11
2111 2528 9.112725 CTGAAAATGAAACCCAAAAGAGAATTT 57.887 29.630 0.00 0.00 0.00 1.82
2116 2533 5.358922 TGCTGAAAATGAAACCCAAAAGAG 58.641 37.500 0.00 0.00 0.00 2.85
2117 2534 5.350504 TGCTGAAAATGAAACCCAAAAGA 57.649 34.783 0.00 0.00 0.00 2.52
2118 2535 6.622833 AATGCTGAAAATGAAACCCAAAAG 57.377 33.333 0.00 0.00 0.00 2.27
2123 2540 5.869344 GGTAGAAATGCTGAAAATGAAACCC 59.131 40.000 0.00 0.00 0.00 4.11
2145 2562 9.712305 CTGCTACATTGCTACTTATATAAAGGT 57.288 33.333 0.00 0.00 0.00 3.50
2154 2571 6.931838 ACTAACACTGCTACATTGCTACTTA 58.068 36.000 0.00 0.00 0.00 2.24
2162 2579 8.095169 AGCTTAGTAAACTAACACTGCTACATT 58.905 33.333 10.80 0.00 35.69 2.71
2165 2582 6.867293 ACAGCTTAGTAAACTAACACTGCTAC 59.133 38.462 18.98 0.00 39.14 3.58
2181 2602 9.220767 CATTTTAACCTCTTAGAACAGCTTAGT 57.779 33.333 0.00 0.00 0.00 2.24
2182 2603 9.220767 ACATTTTAACCTCTTAGAACAGCTTAG 57.779 33.333 0.00 0.00 0.00 2.18
2184 2605 7.040409 CCACATTTTAACCTCTTAGAACAGCTT 60.040 37.037 0.00 0.00 0.00 3.74
2188 2609 6.065374 TGCCACATTTTAACCTCTTAGAACA 58.935 36.000 0.00 0.00 0.00 3.18
2192 2617 8.902806 TCAATATGCCACATTTTAACCTCTTAG 58.097 33.333 0.00 0.00 0.00 2.18
2209 2634 5.595952 AGAGGGTTCTTCAATTCAATATGCC 59.404 40.000 0.00 0.00 0.00 4.40
2220 2645 5.714806 ACTCAACAAAAAGAGGGTTCTTCAA 59.285 36.000 0.00 0.00 42.80 2.69
2225 2650 6.972901 CAGTTTACTCAACAAAAAGAGGGTTC 59.027 38.462 0.00 0.00 37.93 3.62
2227 2652 5.359860 CCAGTTTACTCAACAAAAAGAGGGT 59.640 40.000 0.00 0.00 37.93 4.34
2228 2653 5.592688 TCCAGTTTACTCAACAAAAAGAGGG 59.407 40.000 0.00 0.00 37.93 4.30
2245 2670 3.766545 ACATGTTGGTAGCATCCAGTTT 58.233 40.909 0.00 0.00 38.80 2.66
2248 2673 3.817084 CCATACATGTTGGTAGCATCCAG 59.183 47.826 2.30 0.00 38.80 3.86
2258 2683 2.620115 GCATGGAGACCATACATGTTGG 59.380 50.000 19.38 19.38 43.15 3.77
2265 2690 6.883217 AGATAAATGATGCATGGAGACCATAC 59.117 38.462 2.46 0.00 43.15 2.39
2266 2691 7.024345 AGATAAATGATGCATGGAGACCATA 57.976 36.000 2.46 0.00 43.15 2.74
2267 2692 5.888901 AGATAAATGATGCATGGAGACCAT 58.111 37.500 2.46 0.00 46.37 3.55
2270 2695 6.002704 AGGAAGATAAATGATGCATGGAGAC 58.997 40.000 2.46 0.00 0.00 3.36
2300 2725 9.862149 TCAACTGTTATGATATCTCTACCTGTA 57.138 33.333 3.98 0.00 0.00 2.74
2301 2726 8.634444 GTCAACTGTTATGATATCTCTACCTGT 58.366 37.037 3.98 0.00 0.00 4.00
2302 2727 8.633561 TGTCAACTGTTATGATATCTCTACCTG 58.366 37.037 3.98 0.00 0.00 4.00
2303 2728 8.634444 GTGTCAACTGTTATGATATCTCTACCT 58.366 37.037 3.98 0.00 0.00 3.08
2304 2729 8.414003 TGTGTCAACTGTTATGATATCTCTACC 58.586 37.037 3.98 0.00 0.00 3.18
2305 2730 9.239002 GTGTGTCAACTGTTATGATATCTCTAC 57.761 37.037 3.98 0.10 0.00 2.59
2306 2731 8.129211 CGTGTGTCAACTGTTATGATATCTCTA 58.871 37.037 3.98 0.00 0.00 2.43
2307 2732 6.975197 CGTGTGTCAACTGTTATGATATCTCT 59.025 38.462 3.98 0.00 0.00 3.10
2308 2733 6.199154 CCGTGTGTCAACTGTTATGATATCTC 59.801 42.308 3.98 0.00 0.00 2.75
2309 2734 6.042777 CCGTGTGTCAACTGTTATGATATCT 58.957 40.000 3.98 0.00 0.00 1.98
2315 2740 2.223144 CACCCGTGTGTCAACTGTTATG 59.777 50.000 0.00 0.00 37.72 1.90
2330 2755 3.168528 AACCACTGCCTCACCCGT 61.169 61.111 0.00 0.00 0.00 5.28
2332 2757 2.358737 CGAACCACTGCCTCACCC 60.359 66.667 0.00 0.00 0.00 4.61
2335 2760 0.888619 CTAGACGAACCACTGCCTCA 59.111 55.000 0.00 0.00 0.00 3.86
2337 2762 1.339097 AACTAGACGAACCACTGCCT 58.661 50.000 0.00 0.00 0.00 4.75
2339 2764 4.491676 TCATAAACTAGACGAACCACTGC 58.508 43.478 0.00 0.00 0.00 4.40
2341 2766 8.475639 ACAATATCATAAACTAGACGAACCACT 58.524 33.333 0.00 0.00 0.00 4.00
2342 2767 8.540492 CACAATATCATAAACTAGACGAACCAC 58.460 37.037 0.00 0.00 0.00 4.16
2344 2769 8.644318 ACACAATATCATAAACTAGACGAACC 57.356 34.615 0.00 0.00 0.00 3.62
2348 2773 9.745880 AGGTTACACAATATCATAAACTAGACG 57.254 33.333 0.00 0.00 0.00 4.18
2353 2778 8.774183 TGGGTAGGTTACACAATATCATAAACT 58.226 33.333 0.00 0.00 39.56 2.66
2354 2779 8.967664 TGGGTAGGTTACACAATATCATAAAC 57.032 34.615 0.00 0.00 39.56 2.01
2356 2781 7.663905 GCATGGGTAGGTTACACAATATCATAA 59.336 37.037 0.00 0.00 46.57 1.90
2359 2784 5.131977 AGCATGGGTAGGTTACACAATATCA 59.868 40.000 0.00 0.00 46.57 2.15
2360 2785 5.621193 AGCATGGGTAGGTTACACAATATC 58.379 41.667 0.00 0.00 46.57 1.63
2372 2797 3.502164 CCAAGGAAGCATGGGTAGG 57.498 57.895 0.00 0.00 32.87 3.18
2380 2805 1.039856 GAAGCAAACCCAAGGAAGCA 58.960 50.000 0.00 0.00 0.00 3.91
2381 2806 1.000171 CAGAAGCAAACCCAAGGAAGC 60.000 52.381 0.00 0.00 0.00 3.86
2382 2807 2.310538 ACAGAAGCAAACCCAAGGAAG 58.689 47.619 0.00 0.00 0.00 3.46
2400 2825 6.602406 CCTAGCCTTAGAACTACTGAACTACA 59.398 42.308 0.00 0.00 0.00 2.74
2406 2831 5.453866 ACTCCTAGCCTTAGAACTACTGA 57.546 43.478 0.00 0.00 0.00 3.41
2408 2833 8.841754 AATTTACTCCTAGCCTTAGAACTACT 57.158 34.615 0.00 0.00 0.00 2.57
2415 2840 9.886132 TCACTTTTAATTTACTCCTAGCCTTAG 57.114 33.333 0.00 0.00 0.00 2.18
2416 2841 9.662947 GTCACTTTTAATTTACTCCTAGCCTTA 57.337 33.333 0.00 0.00 0.00 2.69
2417 2842 8.161425 TGTCACTTTTAATTTACTCCTAGCCTT 58.839 33.333 0.00 0.00 0.00 4.35
2418 2843 7.686434 TGTCACTTTTAATTTACTCCTAGCCT 58.314 34.615 0.00 0.00 0.00 4.58
2419 2844 7.916914 TGTCACTTTTAATTTACTCCTAGCC 57.083 36.000 0.00 0.00 0.00 3.93
2422 2847 8.780249 GCACTTGTCACTTTTAATTTACTCCTA 58.220 33.333 0.00 0.00 0.00 2.94
2424 2849 6.861572 GGCACTTGTCACTTTTAATTTACTCC 59.138 38.462 0.00 0.00 0.00 3.85
2425 2850 7.422399 TGGCACTTGTCACTTTTAATTTACTC 58.578 34.615 0.00 0.00 0.00 2.59
2426 2851 7.341445 TGGCACTTGTCACTTTTAATTTACT 57.659 32.000 0.00 0.00 0.00 2.24
2427 2852 8.487176 CAATGGCACTTGTCACTTTTAATTTAC 58.513 33.333 0.00 0.00 29.57 2.01
2428 2853 7.655328 CCAATGGCACTTGTCACTTTTAATTTA 59.345 33.333 0.00 0.00 29.57 1.40
2435 2882 1.688197 CCCAATGGCACTTGTCACTTT 59.312 47.619 0.00 0.00 29.57 2.66
2442 2889 2.214376 TAACCTCCCAATGGCACTTG 57.786 50.000 0.00 0.00 0.00 3.16
2483 2931 5.239963 GGGAAAAGTTCTACACCGAATGAAA 59.760 40.000 0.00 0.00 0.00 2.69
2484 2932 4.758165 GGGAAAAGTTCTACACCGAATGAA 59.242 41.667 0.00 0.00 0.00 2.57
2486 2934 3.124636 CGGGAAAAGTTCTACACCGAATG 59.875 47.826 0.00 0.00 42.19 2.67
2487 2935 3.007182 TCGGGAAAAGTTCTACACCGAAT 59.993 43.478 0.00 0.00 44.85 3.34
2491 2939 3.397849 AGTCGGGAAAAGTTCTACACC 57.602 47.619 0.00 0.00 0.00 4.16
2495 2943 8.857694 AAAAATCATAGTCGGGAAAAGTTCTA 57.142 30.769 0.00 0.00 0.00 2.10
2503 2951 8.617809 GCTAACATTAAAAATCATAGTCGGGAA 58.382 33.333 0.00 0.00 0.00 3.97
2521 2969 9.618890 AGTACACATGATGATTAAGCTAACATT 57.381 29.630 0.00 0.00 0.00 2.71
2527 2975 9.618890 AATGTAAGTACACATGATGATTAAGCT 57.381 29.630 0.00 0.00 39.10 3.74
2561 3009 0.241749 TGCTACAGCTGCAACATTGC 59.758 50.000 15.27 9.70 45.92 3.56
2562 3010 1.135489 CCTGCTACAGCTGCAACATTG 60.135 52.381 15.27 0.00 42.66 2.82
2563 3011 1.171308 CCTGCTACAGCTGCAACATT 58.829 50.000 15.27 0.00 42.66 2.71
2724 3172 3.836562 GGTAAAGGATAAGAGCGGGGATA 59.163 47.826 0.00 0.00 0.00 2.59
2865 3313 0.541863 AATTCCCCTTGATCGCGTCT 59.458 50.000 5.77 0.00 0.00 4.18
2901 3349 2.245942 CCATCGATTATCGCAGAGACG 58.754 52.381 10.02 0.00 43.63 4.18
2943 3391 1.209747 CCTGTCAGTAAGGGGCCTAAC 59.790 57.143 0.84 0.00 0.00 2.34
2946 3394 4.153957 CCTGTCAGTAAGGGGCCT 57.846 61.111 0.84 0.00 0.00 5.19
2955 3403 5.421056 TCTTGTCGAAATATACCCTGTCAGT 59.579 40.000 0.00 0.00 0.00 3.41
2961 3409 5.012148 CCATCCTCTTGTCGAAATATACCCT 59.988 44.000 0.00 0.00 0.00 4.34
2967 3415 5.046591 ACTGTTCCATCCTCTTGTCGAAATA 60.047 40.000 0.00 0.00 0.00 1.40
2970 3418 2.632996 ACTGTTCCATCCTCTTGTCGAA 59.367 45.455 0.00 0.00 0.00 3.71
3009 3457 2.435805 GAGAGCAAGGGATATGGACACA 59.564 50.000 0.00 0.00 0.00 3.72
3027 3475 4.032445 GCTATGCGTATCAAAAACACGAGA 59.968 41.667 0.00 0.00 37.89 4.04
3051 3499 1.950758 GGCGACTATCTCGTCCCTC 59.049 63.158 0.00 0.00 41.45 4.30
3092 3540 1.270777 CGAAGCGCTGGCAAACAAAG 61.271 55.000 12.58 0.00 43.41 2.77
3096 3545 2.903547 TTCCGAAGCGCTGGCAAAC 61.904 57.895 12.58 0.00 43.41 2.93
3102 3551 4.139420 CGCAGTTCCGAAGCGCTG 62.139 66.667 12.58 0.00 45.14 5.18
3132 3581 3.926616 ACAGACTTCTACAATTCCCACG 58.073 45.455 0.00 0.00 0.00 4.94
3133 3582 5.187186 TCCTACAGACTTCTACAATTCCCAC 59.813 44.000 0.00 0.00 0.00 4.61
3134 3583 5.338632 TCCTACAGACTTCTACAATTCCCA 58.661 41.667 0.00 0.00 0.00 4.37
3139 3589 7.183460 ACCTAACTCCTACAGACTTCTACAAT 58.817 38.462 0.00 0.00 0.00 2.71
3145 3595 5.163673 CCGTAACCTAACTCCTACAGACTTC 60.164 48.000 0.00 0.00 0.00 3.01
3184 3634 4.159879 ACCAACCAACGAACCAATTTACAA 59.840 37.500 0.00 0.00 0.00 2.41
3197 3647 2.594321 CATATGTGCAACCAACCAACG 58.406 47.619 0.00 0.00 34.36 4.10
3248 3698 6.418057 TGGTGCAAATAGAAAAGGAACATT 57.582 33.333 0.00 0.00 0.00 2.71
3254 3704 6.828785 AGGTACTATGGTGCAAATAGAAAAGG 59.171 38.462 19.56 0.00 36.02 3.11
3268 3719 4.387664 CCCCTTACTGAGAGGTACTATGGT 60.388 50.000 0.00 0.00 41.55 3.55
3285 3736 6.782988 TGGTGATGTTTTGTTTAATCCCCTTA 59.217 34.615 0.00 0.00 0.00 2.69
3297 3748 2.234414 GGATGCCATGGTGATGTTTTGT 59.766 45.455 14.67 0.00 0.00 2.83
3298 3749 2.736081 CGGATGCCATGGTGATGTTTTG 60.736 50.000 14.67 0.00 0.00 2.44
3302 3753 0.749091 CACGGATGCCATGGTGATGT 60.749 55.000 14.67 3.29 32.23 3.06
3303 3754 0.749091 ACACGGATGCCATGGTGATG 60.749 55.000 14.67 6.34 34.59 3.07
3304 3755 0.034186 AACACGGATGCCATGGTGAT 60.034 50.000 14.67 5.82 34.59 3.06
3305 3756 0.251121 AAACACGGATGCCATGGTGA 60.251 50.000 14.67 0.10 34.59 4.02
3306 3757 0.109179 CAAACACGGATGCCATGGTG 60.109 55.000 14.67 4.82 36.50 4.17
3307 3758 0.539438 ACAAACACGGATGCCATGGT 60.539 50.000 14.67 0.00 0.00 3.55
3308 3759 0.602562 AACAAACACGGATGCCATGG 59.397 50.000 7.63 7.63 0.00 3.66
3309 3760 1.541147 AGAACAAACACGGATGCCATG 59.459 47.619 0.00 0.00 0.00 3.66
3310 3761 1.541147 CAGAACAAACACGGATGCCAT 59.459 47.619 0.00 0.00 0.00 4.40
3311 3762 0.950836 CAGAACAAACACGGATGCCA 59.049 50.000 0.00 0.00 0.00 4.92
3312 3763 1.234821 TCAGAACAAACACGGATGCC 58.765 50.000 0.00 0.00 0.00 4.40
3313 3764 3.236816 CAATCAGAACAAACACGGATGC 58.763 45.455 0.00 0.00 0.00 3.91
3314 3765 3.058016 AGCAATCAGAACAAACACGGATG 60.058 43.478 0.00 0.00 0.00 3.51
3315 3766 3.149196 AGCAATCAGAACAAACACGGAT 58.851 40.909 0.00 0.00 0.00 4.18
3316 3767 2.571212 AGCAATCAGAACAAACACGGA 58.429 42.857 0.00 0.00 0.00 4.69
3317 3768 3.354089 AAGCAATCAGAACAAACACGG 57.646 42.857 0.00 0.00 0.00 4.94
3337 3788 9.461312 ACAATCTATACAAGTGGAAAAGCAATA 57.539 29.630 0.00 0.00 0.00 1.90
3338 3789 8.353423 ACAATCTATACAAGTGGAAAAGCAAT 57.647 30.769 0.00 0.00 0.00 3.56
3339 3790 7.759489 ACAATCTATACAAGTGGAAAAGCAA 57.241 32.000 0.00 0.00 0.00 3.91
3340 3791 7.446931 TGAACAATCTATACAAGTGGAAAAGCA 59.553 33.333 0.00 0.00 0.00 3.91
3341 3792 7.816640 TGAACAATCTATACAAGTGGAAAAGC 58.183 34.615 0.00 0.00 0.00 3.51
3342 3793 9.612620 GTTGAACAATCTATACAAGTGGAAAAG 57.387 33.333 0.00 0.00 0.00 2.27
3343 3794 9.349713 AGTTGAACAATCTATACAAGTGGAAAA 57.650 29.630 0.00 0.00 0.00 2.29
3344 3795 8.918202 AGTTGAACAATCTATACAAGTGGAAA 57.082 30.769 0.00 0.00 0.00 3.13
3345 3796 9.431887 GTAGTTGAACAATCTATACAAGTGGAA 57.568 33.333 0.00 0.00 0.00 3.53
3346 3797 8.038944 GGTAGTTGAACAATCTATACAAGTGGA 58.961 37.037 0.00 0.00 0.00 4.02
3347 3798 7.822334 TGGTAGTTGAACAATCTATACAAGTGG 59.178 37.037 0.00 0.00 0.00 4.00
3348 3799 8.771920 TGGTAGTTGAACAATCTATACAAGTG 57.228 34.615 0.00 0.00 0.00 3.16
3349 3800 9.787435 TTTGGTAGTTGAACAATCTATACAAGT 57.213 29.630 0.00 0.00 0.00 3.16
3356 3807 8.296713 GCAATCTTTTGGTAGTTGAACAATCTA 58.703 33.333 0.00 0.00 33.22 1.98
3361 3812 5.359576 ACAGCAATCTTTTGGTAGTTGAACA 59.640 36.000 0.00 0.00 41.48 3.18
3395 3846 4.473520 CAACGGGGCGAGGCTCAT 62.474 66.667 15.95 0.00 0.00 2.90
3403 3854 2.114670 AAGATCATGCAACGGGGCG 61.115 57.895 0.00 0.00 36.28 6.13
3405 3856 1.462616 TTCAAGATCATGCAACGGGG 58.537 50.000 0.00 0.00 0.00 5.73
3408 3859 6.017687 TCCTGATATTTCAAGATCATGCAACG 60.018 38.462 0.00 0.00 36.21 4.10
3411 3862 6.598503 AGTCCTGATATTTCAAGATCATGCA 58.401 36.000 0.00 0.00 36.21 3.96
3414 3865 9.553064 GTACAAGTCCTGATATTTCAAGATCAT 57.447 33.333 0.00 0.00 36.21 2.45
3426 3877 4.835284 TGCCATTGTACAAGTCCTGATA 57.165 40.909 14.65 0.00 0.00 2.15
3427 3878 3.719268 TGCCATTGTACAAGTCCTGAT 57.281 42.857 14.65 0.00 0.00 2.90
3428 3879 3.500448 TTGCCATTGTACAAGTCCTGA 57.500 42.857 14.65 0.00 0.00 3.86
3429 3880 3.758023 TCATTGCCATTGTACAAGTCCTG 59.242 43.478 14.65 7.16 0.00 3.86
3430 3881 4.032960 TCATTGCCATTGTACAAGTCCT 57.967 40.909 14.65 0.00 0.00 3.85
3431 3882 4.158394 ACATCATTGCCATTGTACAAGTCC 59.842 41.667 14.65 5.00 0.00 3.85
3432 3883 5.097529 CACATCATTGCCATTGTACAAGTC 58.902 41.667 14.65 6.08 0.00 3.01
3433 3884 4.082081 CCACATCATTGCCATTGTACAAGT 60.082 41.667 14.65 0.00 0.00 3.16
3434 3885 4.426416 CCACATCATTGCCATTGTACAAG 58.574 43.478 14.65 2.42 0.00 3.16
3435 3886 3.368220 GCCACATCATTGCCATTGTACAA 60.368 43.478 11.41 11.41 0.00 2.41
3436 3887 2.166050 GCCACATCATTGCCATTGTACA 59.834 45.455 0.00 0.00 0.00 2.90
3437 3888 2.795681 CGCCACATCATTGCCATTGTAC 60.796 50.000 0.00 0.00 0.00 2.90
3438 3889 1.404748 CGCCACATCATTGCCATTGTA 59.595 47.619 0.00 0.00 0.00 2.41
3439 3890 0.173935 CGCCACATCATTGCCATTGT 59.826 50.000 0.00 0.00 0.00 2.71
3440 3891 0.173935 ACGCCACATCATTGCCATTG 59.826 50.000 0.00 0.00 0.00 2.82
3441 3892 0.457035 GACGCCACATCATTGCCATT 59.543 50.000 0.00 0.00 0.00 3.16
3442 3893 0.680601 TGACGCCACATCATTGCCAT 60.681 50.000 0.00 0.00 0.00 4.40
3443 3894 0.892814 TTGACGCCACATCATTGCCA 60.893 50.000 0.00 0.00 0.00 4.92
3444 3895 0.456653 GTTGACGCCACATCATTGCC 60.457 55.000 0.00 0.00 0.00 4.52
3445 3896 0.456653 GGTTGACGCCACATCATTGC 60.457 55.000 0.00 0.00 0.00 3.56
3446 3897 0.880441 TGGTTGACGCCACATCATTG 59.120 50.000 0.00 0.00 32.81 2.82
3447 3898 1.473677 CATGGTTGACGCCACATCATT 59.526 47.619 0.00 0.00 41.94 2.57
3448 3899 1.097232 CATGGTTGACGCCACATCAT 58.903 50.000 0.00 0.00 41.94 2.45
3449 3900 0.250684 ACATGGTTGACGCCACATCA 60.251 50.000 0.00 0.00 41.94 3.07
3450 3901 0.881118 AACATGGTTGACGCCACATC 59.119 50.000 0.00 0.00 41.94 3.06
3451 3902 0.881118 GAACATGGTTGACGCCACAT 59.119 50.000 0.00 0.00 41.94 3.21
3519 3970 6.747414 ATATGTAGTAAAGCCATCCACTCA 57.253 37.500 0.00 0.00 0.00 3.41
3641 4093 4.527564 CTCCGATCCAAATTAATTGACGC 58.472 43.478 0.39 0.00 41.85 5.19
3642 4094 4.024048 CCCTCCGATCCAAATTAATTGACG 60.024 45.833 0.39 4.11 41.85 4.35
3644 4096 5.104109 ACTCCCTCCGATCCAAATTAATTGA 60.104 40.000 0.39 0.00 41.85 2.57
3850 4302 3.675619 ATGACAGGGCGTTACGGGC 62.676 63.158 6.94 0.00 0.00 6.13
3851 4303 1.520787 GATGACAGGGCGTTACGGG 60.521 63.158 6.94 0.00 0.00 5.28
3852 4304 1.520787 GGATGACAGGGCGTTACGG 60.521 63.158 6.94 0.00 0.00 4.02
3853 4305 0.806102 CTGGATGACAGGGCGTTACG 60.806 60.000 0.00 0.00 43.70 3.18
3854 4306 3.065575 CTGGATGACAGGGCGTTAC 57.934 57.895 0.00 0.00 43.70 2.50
3863 4315 0.461870 GTATGCGGCACTGGATGACA 60.462 55.000 4.03 0.00 35.12 3.58
3864 4316 0.461870 TGTATGCGGCACTGGATGAC 60.462 55.000 4.03 0.00 0.00 3.06
3865 4317 0.179076 CTGTATGCGGCACTGGATGA 60.179 55.000 4.03 0.00 0.00 2.92
3866 4318 0.179076 TCTGTATGCGGCACTGGATG 60.179 55.000 4.03 0.00 0.00 3.51
3867 4319 0.179073 GTCTGTATGCGGCACTGGAT 60.179 55.000 4.03 0.00 0.00 3.41
3868 4320 1.218047 GTCTGTATGCGGCACTGGA 59.782 57.895 4.03 0.00 0.00 3.86
3869 4321 1.086067 CAGTCTGTATGCGGCACTGG 61.086 60.000 4.03 0.00 32.42 4.00
3870 4322 1.699656 GCAGTCTGTATGCGGCACTG 61.700 60.000 4.03 8.27 38.01 3.66
3871 4323 1.448540 GCAGTCTGTATGCGGCACT 60.449 57.895 4.03 0.00 33.31 4.40
3872 4324 3.093278 GCAGTCTGTATGCGGCAC 58.907 61.111 4.03 0.00 33.31 5.01
3882 4334 1.656441 GCCAAACCACAGCAGTCTG 59.344 57.895 0.00 0.00 45.71 3.51
3883 4335 1.893808 CGCCAAACCACAGCAGTCT 60.894 57.895 0.00 0.00 0.00 3.24
3884 4336 2.639286 CGCCAAACCACAGCAGTC 59.361 61.111 0.00 0.00 0.00 3.51
3885 4337 2.906897 CCGCCAAACCACAGCAGT 60.907 61.111 0.00 0.00 0.00 4.40
3886 4338 3.673484 CCCGCCAAACCACAGCAG 61.673 66.667 0.00 0.00 0.00 4.24
3951 4403 1.976045 CAAATAGAAAACCGCACACGC 59.024 47.619 0.00 0.00 38.22 5.34
3952 4404 1.976045 GCAAATAGAAAACCGCACACG 59.024 47.619 0.00 0.00 39.67 4.49
3953 4405 2.724174 GTGCAAATAGAAAACCGCACAC 59.276 45.455 7.40 0.00 46.80 3.82
3954 4406 3.006659 GTGCAAATAGAAAACCGCACA 57.993 42.857 7.40 0.00 46.80 4.57
3955 4407 2.287909 TGGTGCAAATAGAAAACCGCAC 60.288 45.455 0.00 0.00 46.85 5.34
3956 4408 1.957177 TGGTGCAAATAGAAAACCGCA 59.043 42.857 0.00 0.00 33.41 5.69
3957 4409 2.715737 TGGTGCAAATAGAAAACCGC 57.284 45.000 0.00 0.00 33.41 5.68
3958 4410 5.560966 ACTATGGTGCAAATAGAAAACCG 57.439 39.130 19.56 0.00 33.41 4.44
3959 4411 7.822658 TGTTACTATGGTGCAAATAGAAAACC 58.177 34.615 19.56 1.54 32.37 3.27
3963 4415 9.674068 TGTTATGTTACTATGGTGCAAATAGAA 57.326 29.630 19.56 9.86 32.85 2.10
3964 4416 9.845740 ATGTTATGTTACTATGGTGCAAATAGA 57.154 29.630 19.56 5.62 32.85 1.98
3966 4418 9.620259 TGATGTTATGTTACTATGGTGCAAATA 57.380 29.630 0.00 0.00 0.00 1.40
3967 4419 8.405531 GTGATGTTATGTTACTATGGTGCAAAT 58.594 33.333 0.00 0.00 0.00 2.32
3968 4420 7.148154 GGTGATGTTATGTTACTATGGTGCAAA 60.148 37.037 0.00 0.00 0.00 3.68
3969 4421 6.317642 GGTGATGTTATGTTACTATGGTGCAA 59.682 38.462 0.00 0.00 0.00 4.08
3970 4422 5.820423 GGTGATGTTATGTTACTATGGTGCA 59.180 40.000 0.00 0.00 0.00 4.57
3971 4423 5.820423 TGGTGATGTTATGTTACTATGGTGC 59.180 40.000 0.00 0.00 0.00 5.01
3972 4424 7.041167 CCATGGTGATGTTATGTTACTATGGTG 60.041 40.741 2.57 0.00 42.18 4.17
3973 4425 6.998074 CCATGGTGATGTTATGTTACTATGGT 59.002 38.462 2.57 0.00 42.18 3.55
3974 4426 6.072508 GCCATGGTGATGTTATGTTACTATGG 60.073 42.308 14.67 12.04 46.73 2.74
3975 4427 6.486320 TGCCATGGTGATGTTATGTTACTATG 59.514 38.462 14.67 0.00 32.25 2.23
3976 4428 6.600388 TGCCATGGTGATGTTATGTTACTAT 58.400 36.000 14.67 0.00 0.00 2.12
3977 4429 5.995446 TGCCATGGTGATGTTATGTTACTA 58.005 37.500 14.67 0.00 0.00 1.82
3978 4430 4.854173 TGCCATGGTGATGTTATGTTACT 58.146 39.130 14.67 0.00 0.00 2.24
3979 4431 5.278463 GGATGCCATGGTGATGTTATGTTAC 60.278 44.000 14.67 0.00 0.00 2.50
3980 4432 4.826733 GGATGCCATGGTGATGTTATGTTA 59.173 41.667 14.67 0.00 0.00 2.41
3981 4433 3.638160 GGATGCCATGGTGATGTTATGTT 59.362 43.478 14.67 0.00 0.00 2.71
3982 4434 3.225104 GGATGCCATGGTGATGTTATGT 58.775 45.455 14.67 0.00 0.00 2.29
3983 4435 2.227149 CGGATGCCATGGTGATGTTATG 59.773 50.000 14.67 0.00 0.00 1.90
3984 4436 2.158623 ACGGATGCCATGGTGATGTTAT 60.159 45.455 14.67 0.00 0.00 1.89
3985 4437 1.211703 ACGGATGCCATGGTGATGTTA 59.788 47.619 14.67 0.00 0.00 2.41
3986 4438 0.034186 ACGGATGCCATGGTGATGTT 60.034 50.000 14.67 0.00 0.00 2.71
3987 4439 0.749091 CACGGATGCCATGGTGATGT 60.749 55.000 14.67 3.29 32.23 3.06
3988 4440 0.749091 ACACGGATGCCATGGTGATG 60.749 55.000 14.67 6.34 34.59 3.07
3989 4441 0.034186 AACACGGATGCCATGGTGAT 60.034 50.000 14.67 5.82 34.59 3.06
3990 4442 0.251121 AAACACGGATGCCATGGTGA 60.251 50.000 14.67 0.10 34.59 4.02
3991 4443 0.109179 CAAACACGGATGCCATGGTG 60.109 55.000 14.67 4.82 36.50 4.17
3992 4444 0.539438 ACAAACACGGATGCCATGGT 60.539 50.000 14.67 0.00 0.00 3.55
3993 4445 0.109179 CACAAACACGGATGCCATGG 60.109 55.000 7.63 7.63 0.00 3.66
3994 4446 0.109179 CCACAAACACGGATGCCATG 60.109 55.000 0.00 0.00 0.00 3.66
3995 4447 0.539438 ACCACAAACACGGATGCCAT 60.539 50.000 0.00 0.00 0.00 4.40
3996 4448 1.152860 ACCACAAACACGGATGCCA 60.153 52.632 0.00 0.00 0.00 4.92
3997 4449 1.169661 TCACCACAAACACGGATGCC 61.170 55.000 0.00 0.00 0.00 4.40
3998 4450 0.881118 ATCACCACAAACACGGATGC 59.119 50.000 0.00 0.00 0.00 3.91
3999 4451 2.921912 GCAATCACCACAAACACGGATG 60.922 50.000 0.00 0.00 0.00 3.51
4000 4452 1.269448 GCAATCACCACAAACACGGAT 59.731 47.619 0.00 0.00 0.00 4.18
4001 4453 0.665835 GCAATCACCACAAACACGGA 59.334 50.000 0.00 0.00 0.00 4.69
4002 4454 0.667993 AGCAATCACCACAAACACGG 59.332 50.000 0.00 0.00 0.00 4.94
4003 4455 2.490328 AAGCAATCACCACAAACACG 57.510 45.000 0.00 0.00 0.00 4.49
4004 4456 4.923281 GGAATAAGCAATCACCACAAACAC 59.077 41.667 0.00 0.00 0.00 3.32
4005 4457 4.832266 AGGAATAAGCAATCACCACAAACA 59.168 37.500 0.00 0.00 0.00 2.83
4006 4458 5.391312 AGGAATAAGCAATCACCACAAAC 57.609 39.130 0.00 0.00 0.00 2.93
4007 4459 5.774690 AGAAGGAATAAGCAATCACCACAAA 59.225 36.000 0.00 0.00 0.00 2.83
4008 4460 5.324409 AGAAGGAATAAGCAATCACCACAA 58.676 37.500 0.00 0.00 0.00 3.33
4009 4461 4.922206 AGAAGGAATAAGCAATCACCACA 58.078 39.130 0.00 0.00 0.00 4.17
4010 4462 4.336713 GGAGAAGGAATAAGCAATCACCAC 59.663 45.833 0.00 0.00 0.00 4.16
4011 4463 4.018506 TGGAGAAGGAATAAGCAATCACCA 60.019 41.667 0.00 0.00 0.00 4.17
4012 4464 4.526970 TGGAGAAGGAATAAGCAATCACC 58.473 43.478 0.00 0.00 0.00 4.02
4013 4465 5.189180 ACTGGAGAAGGAATAAGCAATCAC 58.811 41.667 0.00 0.00 0.00 3.06
4014 4466 5.441718 ACTGGAGAAGGAATAAGCAATCA 57.558 39.130 0.00 0.00 0.00 2.57
4015 4467 5.649831 ACAACTGGAGAAGGAATAAGCAATC 59.350 40.000 0.00 0.00 0.00 2.67
4016 4468 5.574188 ACAACTGGAGAAGGAATAAGCAAT 58.426 37.500 0.00 0.00 0.00 3.56
4017 4469 4.985538 ACAACTGGAGAAGGAATAAGCAA 58.014 39.130 0.00 0.00 0.00 3.91
4018 4470 4.640771 ACAACTGGAGAAGGAATAAGCA 57.359 40.909 0.00 0.00 0.00 3.91
4019 4471 5.978814 TCTACAACTGGAGAAGGAATAAGC 58.021 41.667 0.00 0.00 0.00 3.09
4020 4472 8.043710 ACAATCTACAACTGGAGAAGGAATAAG 58.956 37.037 0.00 0.00 0.00 1.73
4021 4473 7.918076 ACAATCTACAACTGGAGAAGGAATAA 58.082 34.615 0.00 0.00 0.00 1.40
4022 4474 7.496346 ACAATCTACAACTGGAGAAGGAATA 57.504 36.000 0.00 0.00 0.00 1.75
4023 4475 6.380079 ACAATCTACAACTGGAGAAGGAAT 57.620 37.500 0.00 0.00 0.00 3.01
4024 4476 5.825593 ACAATCTACAACTGGAGAAGGAA 57.174 39.130 0.00 0.00 0.00 3.36
4025 4477 5.306937 TGAACAATCTACAACTGGAGAAGGA 59.693 40.000 0.00 0.00 0.00 3.36
4026 4478 5.551233 TGAACAATCTACAACTGGAGAAGG 58.449 41.667 0.00 0.00 0.00 3.46
4027 4479 6.892691 GTTGAACAATCTACAACTGGAGAAG 58.107 40.000 0.00 0.00 40.13 2.85
4028 4480 6.861065 GTTGAACAATCTACAACTGGAGAA 57.139 37.500 0.00 0.00 40.13 2.87
4035 4487 4.829064 TGGCAGTTGAACAATCTACAAC 57.171 40.909 0.00 0.00 42.51 3.32
4036 4488 5.843673 TTTGGCAGTTGAACAATCTACAA 57.156 34.783 0.00 0.00 34.29 2.41
4037 4489 5.592282 TCTTTTGGCAGTTGAACAATCTACA 59.408 36.000 0.00 0.00 34.29 2.74
4038 4490 6.072112 TCTTTTGGCAGTTGAACAATCTAC 57.928 37.500 0.00 0.00 0.00 2.59
4039 4491 6.899393 ATCTTTTGGCAGTTGAACAATCTA 57.101 33.333 0.00 0.00 0.00 1.98
4040 4492 5.796424 ATCTTTTGGCAGTTGAACAATCT 57.204 34.783 0.00 0.00 0.00 2.40
4041 4493 5.754890 ACAATCTTTTGGCAGTTGAACAATC 59.245 36.000 0.00 0.00 37.15 2.67
4042 4494 5.673514 ACAATCTTTTGGCAGTTGAACAAT 58.326 33.333 0.00 0.00 37.15 2.71
4043 4495 5.083533 ACAATCTTTTGGCAGTTGAACAA 57.916 34.783 0.00 0.00 37.15 2.83
4044 4496 4.734398 ACAATCTTTTGGCAGTTGAACA 57.266 36.364 0.00 0.00 37.15 3.18
4045 4497 4.869861 ACAACAATCTTTTGGCAGTTGAAC 59.130 37.500 17.11 0.00 38.80 3.18
4046 4498 4.869297 CACAACAATCTTTTGGCAGTTGAA 59.131 37.500 17.11 0.00 38.80 2.69
4047 4499 4.081752 ACACAACAATCTTTTGGCAGTTGA 60.082 37.500 17.11 4.58 38.80 3.18
4048 4500 4.033129 CACACAACAATCTTTTGGCAGTTG 59.967 41.667 10.76 10.76 41.37 3.16
4049 4501 4.183101 CACACAACAATCTTTTGGCAGTT 58.817 39.130 0.00 0.00 37.15 3.16
4050 4502 3.784338 CACACAACAATCTTTTGGCAGT 58.216 40.909 0.00 0.00 37.15 4.40
4051 4503 2.540931 GCACACAACAATCTTTTGGCAG 59.459 45.455 0.00 0.00 37.15 4.85
4052 4504 2.093816 TGCACACAACAATCTTTTGGCA 60.094 40.909 0.00 0.00 37.15 4.92
4053 4505 2.548875 TGCACACAACAATCTTTTGGC 58.451 42.857 0.00 0.00 37.15 4.52
4054 4506 4.494526 GCTTTGCACACAACAATCTTTTGG 60.495 41.667 0.00 0.00 37.15 3.28
4055 4507 4.093115 TGCTTTGCACACAACAATCTTTTG 59.907 37.500 0.00 0.00 34.87 2.44
4056 4508 4.252073 TGCTTTGCACACAACAATCTTTT 58.748 34.783 0.00 0.00 34.87 2.27
4057 4509 3.859443 TGCTTTGCACACAACAATCTTT 58.141 36.364 0.00 0.00 34.87 2.52
4058 4510 3.523606 TGCTTTGCACACAACAATCTT 57.476 38.095 0.00 0.00 34.87 2.40
4059 4511 3.523606 TTGCTTTGCACACAACAATCT 57.476 38.095 0.00 0.00 38.71 2.40
4060 4512 3.556775 ACATTGCTTTGCACACAACAATC 59.443 39.130 0.00 0.00 38.71 2.67
4061 4513 3.533547 ACATTGCTTTGCACACAACAAT 58.466 36.364 0.00 0.00 38.71 2.71
4062 4514 2.969990 ACATTGCTTTGCACACAACAA 58.030 38.095 0.00 0.00 38.71 2.83
4063 4515 2.669300 ACATTGCTTTGCACACAACA 57.331 40.000 0.00 0.00 38.71 3.33
4064 4516 2.928757 TGAACATTGCTTTGCACACAAC 59.071 40.909 0.00 0.00 38.71 3.32
4065 4517 3.188492 CTGAACATTGCTTTGCACACAA 58.812 40.909 0.00 0.00 38.71 3.33
4066 4518 2.481622 CCTGAACATTGCTTTGCACACA 60.482 45.455 0.00 0.00 38.71 3.72
4067 4519 2.129607 CCTGAACATTGCTTTGCACAC 58.870 47.619 0.00 0.00 38.71 3.82
4068 4520 2.030371 TCCTGAACATTGCTTTGCACA 58.970 42.857 0.00 0.00 38.71 4.57
4069 4521 2.798976 TCCTGAACATTGCTTTGCAC 57.201 45.000 0.00 0.00 38.71 4.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.