Multiple sequence alignment - TraesCS7D01G142700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G142700 chr7D 100.000 4466 0 0 1 4466 90858503 90854038 0.000000e+00 8248.0
1 TraesCS7D01G142700 chr7D 75.695 683 122 30 2108 2785 77087437 77088080 7.260000e-78 302.0
2 TraesCS7D01G142700 chr7D 78.846 312 44 16 1047 1348 77084740 77085039 1.640000e-44 191.0
3 TraesCS7D01G142700 chr7D 83.568 213 26 7 1439 1647 77085120 77085327 1.640000e-44 191.0
4 TraesCS7D01G142700 chr7B 92.727 3410 148 45 395 3775 42037873 42034535 0.000000e+00 4831.0
5 TraesCS7D01G142700 chr7B 94.415 376 10 4 3868 4234 42032960 42032587 6.480000e-158 568.0
6 TraesCS7D01G142700 chr7B 95.652 92 3 1 3772 3863 42033461 42033371 3.600000e-31 147.0
7 TraesCS7D01G142700 chr7B 86.154 130 16 2 1047 1175 24043641 24043769 6.020000e-29 139.0
8 TraesCS7D01G142700 chr7B 92.632 95 5 1 4267 4361 42032586 42032494 7.790000e-28 135.0
9 TraesCS7D01G142700 chr7B 96.000 50 2 0 245 294 42038076 42038027 1.030000e-11 82.4
10 TraesCS7D01G142700 chr7A 88.228 1529 110 44 2328 3847 92894881 92893414 0.000000e+00 1762.0
11 TraesCS7D01G142700 chr7A 89.089 1274 85 29 974 2243 92896149 92894926 0.000000e+00 1533.0
12 TraesCS7D01G142700 chr7A 81.989 905 67 41 13 873 92897060 92896208 0.000000e+00 680.0
13 TraesCS7D01G142700 chr1D 93.358 542 23 6 3868 4403 208284806 208284272 0.000000e+00 789.0
14 TraesCS7D01G142700 chr1D 92.989 542 25 6 3868 4403 227828152 227828686 0.000000e+00 778.0
15 TraesCS7D01G142700 chr4B 84.783 460 42 17 1521 1973 624106703 624107141 1.910000e-118 436.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G142700 chr7D 90854038 90858503 4465 True 8248.00 8248 100.000000 1 4466 1 chr7D.!!$R1 4465
1 TraesCS7D01G142700 chr7D 77084740 77088080 3340 False 228.00 302 79.369667 1047 2785 3 chr7D.!!$F1 1738
2 TraesCS7D01G142700 chr7B 42032494 42038076 5582 True 1152.68 4831 94.285200 245 4361 5 chr7B.!!$R1 4116
3 TraesCS7D01G142700 chr7A 92893414 92897060 3646 True 1325.00 1762 86.435333 13 3847 3 chr7A.!!$R1 3834
4 TraesCS7D01G142700 chr1D 208284272 208284806 534 True 789.00 789 93.358000 3868 4403 1 chr1D.!!$R1 535
5 TraesCS7D01G142700 chr1D 227828152 227828686 534 False 778.00 778 92.989000 3868 4403 1 chr1D.!!$F1 535

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
969 1083 0.036858 GTGAGTGGGGAGTGAAGAGC 60.037 60.0 0.00 0.00 0.00 4.09 F
1453 1581 0.975887 TGCTGGAATTCCCCTTTTGC 59.024 50.0 21.90 15.06 34.29 3.68 F
2343 4237 0.034756 CACACATGAACCGGTCCTGA 59.965 55.0 8.04 0.00 0.00 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2323 4209 0.250295 CAGGACCGGTTCATGTGTGT 60.250 55.0 17.22 0.0 31.0 3.72 R
3053 4954 0.877071 GCTGTGGTGATGTGAAGGTG 59.123 55.0 0.00 0.0 0.0 4.00 R
3562 5472 0.179045 AGGCCACACACACTCTTCAC 60.179 55.0 5.01 0.0 0.0 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 3.155861 TGTGGTGGGGTTCGTCGT 61.156 61.111 0.00 0.00 0.00 4.34
51 52 1.661197 GTTCGTCGTTGTACGGCCA 60.661 57.895 2.24 0.00 44.43 5.36
57 58 2.032634 CGTTGTACGGCCACATGCT 61.033 57.895 2.24 0.00 38.08 3.79
58 59 1.573829 CGTTGTACGGCCACATGCTT 61.574 55.000 2.24 0.00 38.08 3.91
59 60 0.109781 GTTGTACGGCCACATGCTTG 60.110 55.000 2.24 0.00 40.92 4.01
65 66 2.883730 GCCACATGCTTGCATGCG 60.884 61.111 28.75 21.70 36.08 4.73
67 68 1.515519 CCACATGCTTGCATGCGTC 60.516 57.895 28.75 4.94 36.08 5.19
68 69 1.515519 CACATGCTTGCATGCGTCC 60.516 57.895 28.75 3.72 36.08 4.79
69 70 2.277692 CATGCTTGCATGCGTCCG 60.278 61.111 20.44 3.32 35.36 4.79
70 71 3.511595 ATGCTTGCATGCGTCCGG 61.512 61.111 18.54 0.00 35.36 5.14
77 78 4.529219 CATGCGTCCGGCCAGCTA 62.529 66.667 2.24 4.42 42.61 3.32
78 79 4.227134 ATGCGTCCGGCCAGCTAG 62.227 66.667 2.24 0.00 42.61 3.42
92 93 0.181587 AGCTAGCTACCTCTCTCGCA 59.818 55.000 17.69 0.00 0.00 5.10
99 100 2.159626 GCTACCTCTCTCGCATCGTATC 60.160 54.545 0.00 0.00 0.00 2.24
102 103 1.136197 CCTCTCTCGCATCGTATCGTC 60.136 57.143 0.00 0.00 0.00 4.20
104 105 0.451299 CTCTCGCATCGTATCGTCCG 60.451 60.000 0.00 0.00 0.00 4.79
119 120 2.663852 CCGGCTTTGAACGACGGT 60.664 61.111 7.92 0.00 39.70 4.83
120 121 2.248835 CCGGCTTTGAACGACGGTT 61.249 57.895 7.92 0.00 39.70 4.44
121 122 1.083015 CGGCTTTGAACGACGGTTG 60.083 57.895 0.00 0.00 36.24 3.77
125 126 1.396316 GCTTTGAACGACGGTTGTACG 60.396 52.381 0.50 0.00 36.24 3.67
146 147 6.199937 ACGTACGTACATGGAGATAACTTT 57.800 37.500 21.41 0.00 0.00 2.66
150 151 9.241317 CGTACGTACATGGAGATAACTTTTTAT 57.759 33.333 24.50 0.00 0.00 1.40
179 190 8.723942 ACTCAAAAAGCGTCTTATAATCTGAT 57.276 30.769 0.00 0.00 0.00 2.90
193 204 2.054232 TCTGATACGGAGGGAGTGTC 57.946 55.000 0.00 0.00 0.00 3.67
194 205 1.564818 TCTGATACGGAGGGAGTGTCT 59.435 52.381 0.00 0.00 32.11 3.41
204 215 1.546476 AGGGAGTGTCTCATCGTGTTC 59.454 52.381 0.00 0.00 31.08 3.18
217 228 5.601662 TCATCGTGTTCTTCTTCTTGTTCT 58.398 37.500 0.00 0.00 0.00 3.01
218 229 5.463392 TCATCGTGTTCTTCTTCTTGTTCTG 59.537 40.000 0.00 0.00 0.00 3.02
220 231 3.309682 CGTGTTCTTCTTCTTGTTCTGCA 59.690 43.478 0.00 0.00 0.00 4.41
221 232 4.024556 CGTGTTCTTCTTCTTGTTCTGCAT 60.025 41.667 0.00 0.00 0.00 3.96
228 239 3.248363 TCTTCTTGTTCTGCATTGTGTCG 59.752 43.478 0.00 0.00 0.00 4.35
236 247 7.139896 TGTTCTGCATTGTGTCGTAATATTT 57.860 32.000 0.00 0.00 0.00 1.40
294 305 5.639757 TCGTGTAAATGATTTGCATCAAGG 58.360 37.500 11.67 1.18 42.93 3.61
296 307 5.512788 CGTGTAAATGATTTGCATCAAGGAC 59.487 40.000 11.67 0.00 42.93 3.85
299 310 0.810648 TGATTTGCATCAAGGACGGC 59.189 50.000 0.00 0.00 36.41 5.68
303 314 3.134127 GCATCAAGGACGGCACCC 61.134 66.667 0.00 0.00 0.00 4.61
304 315 2.671070 CATCAAGGACGGCACCCT 59.329 61.111 0.00 0.00 35.03 4.34
305 316 1.002134 CATCAAGGACGGCACCCTT 60.002 57.895 0.00 1.95 44.36 3.95
306 317 0.609131 CATCAAGGACGGCACCCTTT 60.609 55.000 4.83 0.00 41.79 3.11
330 360 3.503363 GATGCACTGCCGCTGGAC 61.503 66.667 0.00 0.00 0.00 4.02
390 450 4.213482 CCTACATTTATTTACTGCTCCCGC 59.787 45.833 0.00 0.00 0.00 6.13
404 471 4.041762 CCGCTGGTTGGGCCCTTA 62.042 66.667 25.70 8.41 36.04 2.69
489 557 3.129502 CGCCTGTCATGCACCCAG 61.130 66.667 0.00 0.00 0.00 4.45
490 558 2.034687 GCCTGTCATGCACCCAGT 59.965 61.111 0.00 0.00 0.00 4.00
530 598 3.976701 CTAACCACCCAGCCAGCCG 62.977 68.421 0.00 0.00 0.00 5.52
742 835 2.122369 CCCGCCTTATCCTCCCCT 60.122 66.667 0.00 0.00 0.00 4.79
743 836 1.770518 CCCGCCTTATCCTCCCCTT 60.771 63.158 0.00 0.00 0.00 3.95
744 837 1.755384 CCGCCTTATCCTCCCCTTC 59.245 63.158 0.00 0.00 0.00 3.46
745 838 1.755384 CGCCTTATCCTCCCCTTCC 59.245 63.158 0.00 0.00 0.00 3.46
746 839 1.755384 GCCTTATCCTCCCCTTCCG 59.245 63.158 0.00 0.00 0.00 4.30
747 840 1.054978 GCCTTATCCTCCCCTTCCGT 61.055 60.000 0.00 0.00 0.00 4.69
748 841 1.508256 CCTTATCCTCCCCTTCCGTT 58.492 55.000 0.00 0.00 0.00 4.44
749 842 1.844497 CCTTATCCTCCCCTTCCGTTT 59.156 52.381 0.00 0.00 0.00 3.60
750 843 2.158798 CCTTATCCTCCCCTTCCGTTTC 60.159 54.545 0.00 0.00 0.00 2.78
751 844 1.503800 TATCCTCCCCTTCCGTTTCC 58.496 55.000 0.00 0.00 0.00 3.13
761 868 0.116541 TTCCGTTTCCCTCCCTCTCT 59.883 55.000 0.00 0.00 0.00 3.10
776 883 2.438614 TCTCTCTCCCTGCGTCCG 60.439 66.667 0.00 0.00 0.00 4.79
878 992 3.145551 CATTGCCCTGCCTGCCTC 61.146 66.667 0.00 0.00 0.00 4.70
879 993 3.345028 ATTGCCCTGCCTGCCTCT 61.345 61.111 0.00 0.00 0.00 3.69
880 994 3.657038 ATTGCCCTGCCTGCCTCTG 62.657 63.158 0.00 0.00 0.00 3.35
923 1037 2.023882 GTAGGTCCGTACGCGCTC 59.976 66.667 10.49 0.00 36.67 5.03
958 1072 0.319728 CAGTGAGTGGAGTGAGTGGG 59.680 60.000 0.00 0.00 0.00 4.61
969 1083 0.036858 GTGAGTGGGGAGTGAAGAGC 60.037 60.000 0.00 0.00 0.00 4.09
988 1102 1.153588 GACCTCTGCTCTGCTCTGC 60.154 63.158 0.00 0.00 0.00 4.26
1030 1144 3.373565 GGCTTCTTGTTGGGGCGG 61.374 66.667 0.00 0.00 0.00 6.13
1036 1150 2.042843 TTGTTGGGGCGGTTTGGT 60.043 55.556 0.00 0.00 0.00 3.67
1260 1374 3.532155 CCCTCTCCGCTCCCTTCG 61.532 72.222 0.00 0.00 0.00 3.79
1362 1485 2.595655 GTAGGCCACCATCCACCC 59.404 66.667 5.01 0.00 0.00 4.61
1363 1486 2.694616 TAGGCCACCATCCACCCC 60.695 66.667 5.01 0.00 0.00 4.95
1364 1487 3.587925 TAGGCCACCATCCACCCCA 62.588 63.158 5.01 0.00 0.00 4.96
1425 1553 1.439644 GGCTCACTGATCGACCCTC 59.560 63.158 0.00 0.00 0.00 4.30
1453 1581 0.975887 TGCTGGAATTCCCCTTTTGC 59.024 50.000 21.90 15.06 34.29 3.68
1560 1691 2.665185 GCGCCGTTCAACAGGAGT 60.665 61.111 0.00 0.00 0.00 3.85
1685 1816 1.404315 CCCTTCCTTCCTTCGAGTTCG 60.404 57.143 0.00 0.00 41.45 3.95
1961 3845 3.458189 AGAAACTCCACACTGAACTTCG 58.542 45.455 0.00 0.00 0.00 3.79
1977 3861 5.179368 TGAACTTCGGTCAGACAATGAATTC 59.821 40.000 2.17 0.00 40.43 2.17
2011 3897 2.172483 TTGCTCTCCTCGCAGGGAAC 62.172 60.000 2.86 0.00 38.80 3.62
2287 4173 3.022401 GCAAGCGCGACAATTCGGA 62.022 57.895 12.10 0.00 45.98 4.55
2301 4187 6.325919 ACAATTCGGAGCATTTTACAGAAA 57.674 33.333 0.00 0.00 0.00 2.52
2321 4207 5.814705 AGAAATTCTCAGGCAGAAAGATACG 59.185 40.000 0.00 0.00 44.66 3.06
2323 4209 5.854010 ATTCTCAGGCAGAAAGATACGTA 57.146 39.130 0.00 0.00 44.66 3.57
2342 4236 0.250295 ACACACATGAACCGGTCCTG 60.250 55.000 8.04 8.60 0.00 3.86
2343 4237 0.034756 CACACATGAACCGGTCCTGA 59.965 55.000 8.04 0.00 0.00 3.86
2344 4238 0.762418 ACACATGAACCGGTCCTGAA 59.238 50.000 8.04 0.00 0.00 3.02
2345 4239 1.351017 ACACATGAACCGGTCCTGAAT 59.649 47.619 8.04 0.00 0.00 2.57
2532 4430 0.678048 CTGGAGGGGCTTACAACAGC 60.678 60.000 0.00 0.00 39.28 4.40
2585 4483 3.181329 TCAGCTTCTGGTAAGATGGGAA 58.819 45.455 3.47 0.00 34.67 3.97
2595 4493 5.509498 TGGTAAGATGGGAAATTCTTGAGG 58.491 41.667 0.00 0.00 34.22 3.86
2623 4521 7.614583 AGAAATTCAGTGGATGTTCTTGATGAT 59.385 33.333 0.00 0.00 0.00 2.45
2639 4537 7.052248 TCTTGATGATGATGCTGTTCTTATGT 58.948 34.615 0.00 0.00 0.00 2.29
2671 4572 3.473147 CAGGTTCCTGGATCAGCTG 57.527 57.895 7.63 7.63 0.00 4.24
2674 4575 1.225704 GTTCCTGGATCAGCTGGGG 59.774 63.158 15.13 8.81 0.00 4.96
2792 4693 6.358178 CCTGACTACTACAGGTAAGATCAGA 58.642 44.000 0.00 0.00 46.71 3.27
2796 4697 7.285629 TGACTACTACAGGTAAGATCAGAATGG 59.714 40.741 0.00 0.00 36.16 3.16
2820 4721 9.431887 TGGTACATAAGTTTCTACAATGAACTC 57.568 33.333 0.00 0.00 0.00 3.01
2821 4722 8.592998 GGTACATAAGTTTCTACAATGAACTCG 58.407 37.037 0.00 0.00 0.00 4.18
2822 4723 9.350357 GTACATAAGTTTCTACAATGAACTCGA 57.650 33.333 0.00 0.00 0.00 4.04
2823 4724 8.240883 ACATAAGTTTCTACAATGAACTCGAC 57.759 34.615 0.00 0.00 0.00 4.20
2824 4725 5.824243 AAGTTTCTACAATGAACTCGACG 57.176 39.130 0.00 0.00 0.00 5.12
2825 4726 5.117355 AGTTTCTACAATGAACTCGACGA 57.883 39.130 0.00 0.00 0.00 4.20
2826 4727 5.526115 AGTTTCTACAATGAACTCGACGAA 58.474 37.500 0.00 0.00 0.00 3.85
2827 4728 5.981315 AGTTTCTACAATGAACTCGACGAAA 59.019 36.000 0.00 0.00 0.00 3.46
2828 4729 6.645415 AGTTTCTACAATGAACTCGACGAAAT 59.355 34.615 0.00 0.00 0.00 2.17
2829 4730 6.627690 TTCTACAATGAACTCGACGAAATC 57.372 37.500 0.00 0.69 0.00 2.17
2830 4731 5.950883 TCTACAATGAACTCGACGAAATCT 58.049 37.500 0.00 0.00 0.00 2.40
2831 4732 4.910746 ACAATGAACTCGACGAAATCTG 57.089 40.909 0.00 0.00 0.00 2.90
2832 4733 3.123621 ACAATGAACTCGACGAAATCTGC 59.876 43.478 0.00 0.00 0.00 4.26
2833 4734 2.432206 TGAACTCGACGAAATCTGCA 57.568 45.000 0.00 0.00 0.00 4.41
2834 4735 2.328473 TGAACTCGACGAAATCTGCAG 58.672 47.619 7.63 7.63 0.00 4.41
2835 4736 2.288213 TGAACTCGACGAAATCTGCAGT 60.288 45.455 14.67 0.00 0.00 4.40
2836 4737 2.440539 ACTCGACGAAATCTGCAGTT 57.559 45.000 14.67 1.65 0.00 3.16
3051 4952 1.133325 AGCGACCCAGATGATCCTACT 60.133 52.381 0.00 0.00 0.00 2.57
3052 4953 2.108425 AGCGACCCAGATGATCCTACTA 59.892 50.000 0.00 0.00 0.00 1.82
3053 4954 2.229302 GCGACCCAGATGATCCTACTAC 59.771 54.545 0.00 0.00 0.00 2.73
3059 4960 4.282195 CCCAGATGATCCTACTACACCTTC 59.718 50.000 0.00 0.00 0.00 3.46
3082 4983 0.602638 TCACCACAGCAACATCGACC 60.603 55.000 0.00 0.00 0.00 4.79
3120 5021 3.118531 ACCCTTATCCTTGCATGTCTCT 58.881 45.455 0.00 0.00 0.00 3.10
3488 5398 1.762370 AGGGCTTTTTGGTGTTCTTGG 59.238 47.619 0.00 0.00 0.00 3.61
3517 5427 7.510343 GGTATAGGTAGTGGTGATAAAAGGGTA 59.490 40.741 0.00 0.00 0.00 3.69
3562 5472 8.472007 CCTAGCTAGGATAGTTATAAGATGGG 57.528 42.308 32.79 1.15 46.63 4.00
3580 5490 1.166531 GGTGAAGAGTGTGTGTGGCC 61.167 60.000 0.00 0.00 0.00 5.36
3627 5537 4.609301 TGGAGGGGAAATTGAAATAGTGG 58.391 43.478 0.00 0.00 0.00 4.00
3665 5576 5.416013 GGGAATAACTCTTTCCTGGTTTCTG 59.584 44.000 2.76 0.00 41.98 3.02
3702 5614 3.057969 TCTTGTAATGGTGGCAGACAG 57.942 47.619 0.00 0.00 0.00 3.51
3706 5618 3.826524 TGTAATGGTGGCAGACAGAAAA 58.173 40.909 0.00 0.00 0.00 2.29
3774 6764 6.830324 TGGATGGGAAACATAGAGAATCAAAG 59.170 38.462 0.00 0.00 40.72 2.77
3788 6778 2.859165 TCAAAGGTCGGAATGAAGCT 57.141 45.000 0.00 0.00 0.00 3.74
3849 6839 6.834168 TCCACAGGAATTTCATAGAAAACC 57.166 37.500 0.00 4.18 0.00 3.27
3863 6853 7.284074 TCATAGAAAACCAACTACTTCCACAA 58.716 34.615 0.00 0.00 0.00 3.33
3864 6854 7.444183 TCATAGAAAACCAACTACTTCCACAAG 59.556 37.037 0.00 0.00 35.50 3.16
3865 6855 5.751586 AGAAAACCAACTACTTCCACAAGA 58.248 37.500 0.00 0.00 33.34 3.02
3866 6856 6.184789 AGAAAACCAACTACTTCCACAAGAA 58.815 36.000 0.00 0.00 33.34 2.52
3895 7291 8.181904 ACCAGATCATTATCTTTGTTTTGTGT 57.818 30.769 0.00 0.00 40.65 3.72
4021 7423 1.016627 TGCGCAAAGGTCATAGCATC 58.983 50.000 8.16 0.00 0.00 3.91
4211 7613 6.260377 TCAAGCAAATCATATTTCTTCTGCG 58.740 36.000 0.00 0.00 33.83 5.18
4225 7630 7.667043 TTTCTTCTGCGAATAATAGTGTTGT 57.333 32.000 0.00 0.00 0.00 3.32
4249 7654 3.070159 CGGTCATGTTCCCTCATGTATCT 59.930 47.826 6.57 0.00 43.70 1.98
4254 7659 5.191522 TCATGTTCCCTCATGTATCTTTCCA 59.808 40.000 6.57 0.00 43.70 3.53
4334 7739 1.196581 TCCATGCATTTCGTGTGTTCG 59.803 47.619 0.00 0.00 0.00 3.95
4338 7743 1.268285 TGCATTTCGTGTGTTCGTTGG 60.268 47.619 0.00 0.00 0.00 3.77
4403 7808 3.489355 TGCACAATTCAGTCCAAGATGT 58.511 40.909 0.00 0.00 0.00 3.06
4404 7809 3.890756 TGCACAATTCAGTCCAAGATGTT 59.109 39.130 0.00 0.00 0.00 2.71
4405 7810 5.069318 TGCACAATTCAGTCCAAGATGTTA 58.931 37.500 0.00 0.00 0.00 2.41
4406 7811 5.534278 TGCACAATTCAGTCCAAGATGTTAA 59.466 36.000 0.00 0.00 0.00 2.01
4407 7812 6.209192 TGCACAATTCAGTCCAAGATGTTAAT 59.791 34.615 0.00 0.00 0.00 1.40
4408 7813 7.092716 GCACAATTCAGTCCAAGATGTTAATT 58.907 34.615 0.00 0.00 0.00 1.40
4409 7814 7.599998 GCACAATTCAGTCCAAGATGTTAATTT 59.400 33.333 0.00 0.00 0.00 1.82
4416 7821 8.677300 TCAGTCCAAGATGTTAATTTATTCAGC 58.323 33.333 0.00 0.00 0.00 4.26
4417 7822 8.461222 CAGTCCAAGATGTTAATTTATTCAGCA 58.539 33.333 0.00 0.00 0.00 4.41
4418 7823 8.462016 AGTCCAAGATGTTAATTTATTCAGCAC 58.538 33.333 0.00 0.00 0.00 4.40
4419 7824 8.243426 GTCCAAGATGTTAATTTATTCAGCACA 58.757 33.333 0.00 0.00 0.00 4.57
4420 7825 8.801299 TCCAAGATGTTAATTTATTCAGCACAA 58.199 29.630 0.00 0.00 0.00 3.33
4421 7826 9.590451 CCAAGATGTTAATTTATTCAGCACAAT 57.410 29.630 0.00 0.00 0.00 2.71
4426 7831 9.926158 ATGTTAATTTATTCAGCACAATTGACA 57.074 25.926 13.59 0.10 38.62 3.58
4427 7832 9.409312 TGTTAATTTATTCAGCACAATTGACAG 57.591 29.630 13.59 2.72 32.95 3.51
4428 7833 9.410556 GTTAATTTATTCAGCACAATTGACAGT 57.589 29.630 13.59 0.00 29.79 3.55
4432 7837 8.969121 TTTATTCAGCACAATTGACAGTATTG 57.031 30.769 13.59 0.00 38.61 1.90
4433 7838 6.579666 ATTCAGCACAATTGACAGTATTGT 57.420 33.333 13.59 0.51 44.69 2.71
4442 7847 8.087982 ACAATTGACAGTATTGTGTAACTGAG 57.912 34.615 13.59 0.00 44.79 3.35
4443 7848 7.715249 ACAATTGACAGTATTGTGTAACTGAGT 59.285 33.333 13.59 0.00 44.79 3.41
4444 7849 8.559536 CAATTGACAGTATTGTGTAACTGAGTT 58.440 33.333 2.37 2.37 44.79 3.01
4445 7850 8.677148 ATTGACAGTATTGTGTAACTGAGTTT 57.323 30.769 1.97 0.00 44.79 2.66
4446 7851 9.772973 ATTGACAGTATTGTGTAACTGAGTTTA 57.227 29.630 1.97 0.00 44.79 2.01
4447 7852 9.772973 TTGACAGTATTGTGTAACTGAGTTTAT 57.227 29.630 1.97 0.00 44.79 1.40
4448 7853 9.772973 TGACAGTATTGTGTAACTGAGTTTATT 57.227 29.630 1.97 0.00 44.79 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 2.733669 AACGACGAACCCCACCACA 61.734 57.895 0.00 0.00 0.00 4.17
25 26 2.109593 AACGACGAACCCCACCAC 59.890 61.111 0.00 0.00 0.00 4.16
26 27 1.398174 TACAACGACGAACCCCACCA 61.398 55.000 0.00 0.00 0.00 4.17
27 28 0.945743 GTACAACGACGAACCCCACC 60.946 60.000 0.00 0.00 0.00 4.61
41 42 1.861542 GCAAGCATGTGGCCGTACAA 61.862 55.000 0.00 0.00 46.50 2.41
65 66 2.417936 GTAGCTAGCTGGCCGGAC 59.582 66.667 27.68 12.35 0.00 4.79
67 68 2.840102 AGGTAGCTAGCTGGCCGG 60.840 66.667 27.68 7.41 31.96 6.13
68 69 1.801309 GAGAGGTAGCTAGCTGGCCG 61.801 65.000 29.22 0.00 33.58 6.13
69 70 0.469144 AGAGAGGTAGCTAGCTGGCC 60.469 60.000 29.22 25.70 33.58 5.36
70 71 0.958822 GAGAGAGGTAGCTAGCTGGC 59.041 60.000 29.22 15.23 33.58 4.85
71 72 1.234821 CGAGAGAGGTAGCTAGCTGG 58.765 60.000 29.22 9.62 33.58 4.85
72 73 0.591170 GCGAGAGAGGTAGCTAGCTG 59.409 60.000 29.22 15.40 33.58 4.24
74 75 1.199097 GATGCGAGAGAGGTAGCTAGC 59.801 57.143 15.19 15.19 34.02 3.42
75 76 1.463056 CGATGCGAGAGAGGTAGCTAG 59.537 57.143 0.00 0.00 0.00 3.42
76 77 1.202663 ACGATGCGAGAGAGGTAGCTA 60.203 52.381 0.00 0.00 0.00 3.32
77 78 0.464735 ACGATGCGAGAGAGGTAGCT 60.465 55.000 0.00 0.00 0.00 3.32
78 79 1.227639 TACGATGCGAGAGAGGTAGC 58.772 55.000 0.00 0.00 0.00 3.58
92 93 0.742505 TCAAAGCCGGACGATACGAT 59.257 50.000 5.05 0.00 0.00 3.73
99 100 2.851104 GTCGTTCAAAGCCGGACG 59.149 61.111 5.05 4.92 36.89 4.79
102 103 2.248835 AACCGTCGTTCAAAGCCGG 61.249 57.895 0.00 0.00 44.06 6.13
104 105 1.070376 GTACAACCGTCGTTCAAAGCC 60.070 52.381 0.00 0.00 0.00 4.35
163 174 5.333513 CCTCCGTATCAGATTATAAGACGC 58.666 45.833 0.00 0.00 0.00 5.19
171 182 4.141228 AGACACTCCCTCCGTATCAGATTA 60.141 45.833 0.00 0.00 0.00 1.75
175 186 1.950909 GAGACACTCCCTCCGTATCAG 59.049 57.143 0.00 0.00 0.00 2.90
179 190 1.746171 CGATGAGACACTCCCTCCGTA 60.746 57.143 0.00 0.00 0.00 4.02
193 204 5.694006 AGAACAAGAAGAAGAACACGATGAG 59.306 40.000 0.00 0.00 0.00 2.90
194 205 5.463392 CAGAACAAGAAGAAGAACACGATGA 59.537 40.000 0.00 0.00 0.00 2.92
204 215 5.179045 ACACAATGCAGAACAAGAAGAAG 57.821 39.130 0.00 0.00 0.00 2.85
217 228 5.499493 CGACGAAATATTACGACACAATGCA 60.499 40.000 0.00 0.00 0.00 3.96
218 229 4.890654 CGACGAAATATTACGACACAATGC 59.109 41.667 0.00 0.00 0.00 3.56
220 231 5.574055 ACACGACGAAATATTACGACACAAT 59.426 36.000 0.00 0.00 0.00 2.71
221 232 4.916831 ACACGACGAAATATTACGACACAA 59.083 37.500 0.00 0.00 0.00 3.33
228 239 5.626258 GTGGGTACACGACGAAATATTAC 57.374 43.478 0.00 0.00 37.94 1.89
294 305 0.313987 CTTTGGAAAAGGGTGCCGTC 59.686 55.000 0.00 0.00 0.00 4.79
296 307 1.067635 CATCTTTGGAAAAGGGTGCCG 60.068 52.381 0.20 0.00 0.00 5.69
299 310 2.629617 AGTGCATCTTTGGAAAAGGGTG 59.370 45.455 0.00 2.02 0.00 4.61
303 314 2.680577 GGCAGTGCATCTTTGGAAAAG 58.319 47.619 18.61 0.00 0.00 2.27
304 315 1.000385 CGGCAGTGCATCTTTGGAAAA 60.000 47.619 18.61 0.00 0.00 2.29
305 316 0.597568 CGGCAGTGCATCTTTGGAAA 59.402 50.000 18.61 0.00 0.00 3.13
306 317 1.865788 GCGGCAGTGCATCTTTGGAA 61.866 55.000 18.61 0.00 34.15 3.53
330 360 7.599171 TGCATGCTCCATGATCTTTATAAATG 58.401 34.615 20.33 0.00 43.81 2.32
364 400 5.130350 GGAGCAGTAAATAAATGTAGGCCA 58.870 41.667 5.01 0.00 0.00 5.36
390 450 1.077429 GAGCTAAGGGCCCAACCAG 60.077 63.158 27.56 15.73 43.05 4.00
471 538 3.610619 CTGGGTGCATGACAGGCGA 62.611 63.158 7.68 0.00 0.00 5.54
489 557 2.474032 GGTTAGCGCGATTTTGACTGAC 60.474 50.000 12.10 1.75 0.00 3.51
490 558 1.730064 GGTTAGCGCGATTTTGACTGA 59.270 47.619 12.10 0.00 0.00 3.41
553 621 3.138798 GCGCTCCAGGTAGGACGA 61.139 66.667 0.00 0.00 43.07 4.20
575 643 4.827087 CGCCATGGTCGAGCTGCT 62.827 66.667 19.72 0.00 0.00 4.24
696 789 2.194212 TCTAGCTCTAAGGCGGGCG 61.194 63.158 0.00 0.00 37.29 6.13
697 790 1.364536 GTCTAGCTCTAAGGCGGGC 59.635 63.158 0.00 0.00 37.29 6.13
698 791 1.465200 GGGTCTAGCTCTAAGGCGGG 61.465 65.000 0.00 0.00 37.29 6.13
699 792 0.755698 TGGGTCTAGCTCTAAGGCGG 60.756 60.000 0.00 0.00 37.29 6.13
742 835 0.116541 AGAGAGGGAGGGAAACGGAA 59.883 55.000 0.00 0.00 0.00 4.30
743 836 0.324460 GAGAGAGGGAGGGAAACGGA 60.324 60.000 0.00 0.00 0.00 4.69
744 837 0.324830 AGAGAGAGGGAGGGAAACGG 60.325 60.000 0.00 0.00 0.00 4.44
745 838 1.107945 GAGAGAGAGGGAGGGAAACG 58.892 60.000 0.00 0.00 0.00 3.60
746 839 2.384828 GAGAGAGAGAGGGAGGGAAAC 58.615 57.143 0.00 0.00 0.00 2.78
747 840 1.289530 GGAGAGAGAGAGGGAGGGAAA 59.710 57.143 0.00 0.00 0.00 3.13
748 841 0.930726 GGAGAGAGAGAGGGAGGGAA 59.069 60.000 0.00 0.00 0.00 3.97
749 842 0.996762 GGGAGAGAGAGAGGGAGGGA 60.997 65.000 0.00 0.00 0.00 4.20
750 843 0.998945 AGGGAGAGAGAGAGGGAGGG 60.999 65.000 0.00 0.00 0.00 4.30
751 844 0.185901 CAGGGAGAGAGAGAGGGAGG 59.814 65.000 0.00 0.00 0.00 4.30
813 920 2.574929 CACCTACACGGCGCCTAA 59.425 61.111 26.68 5.76 35.61 2.69
814 921 3.454573 CCACCTACACGGCGCCTA 61.455 66.667 26.68 9.49 35.61 3.93
958 1072 0.172352 CAGAGGTCGCTCTTCACTCC 59.828 60.000 0.00 0.00 0.00 3.85
969 1083 1.139308 CAGAGCAGAGCAGAGGTCG 59.861 63.158 0.00 0.00 37.34 4.79
1030 1144 2.027460 CACCGCCAGCAACCAAAC 59.973 61.111 0.00 0.00 0.00 2.93
1277 1391 5.304357 GGGGTTGAGAAAGAAAGAAAATGGA 59.696 40.000 0.00 0.00 0.00 3.41
1362 1485 2.445845 TCTAGCGGGATGGGGTGG 60.446 66.667 0.00 0.00 0.00 4.61
1363 1486 3.142393 CTCTAGCGGGATGGGGTG 58.858 66.667 0.00 0.00 0.00 4.61
1364 1487 2.844839 GCTCTAGCGGGATGGGGT 60.845 66.667 0.00 0.00 0.00 4.95
1425 1553 2.527547 GAATTCCAGCACCGTTGGCG 62.528 60.000 0.00 0.00 35.62 5.69
1453 1581 3.494336 CGGCGAGAAGGCTGCAAG 61.494 66.667 0.00 0.00 44.22 4.01
1556 1687 2.223525 CCGAACATCTCCGACTTACTCC 60.224 54.545 0.00 0.00 0.00 3.85
1560 1691 1.471119 AGCCGAACATCTCCGACTTA 58.529 50.000 0.00 0.00 0.00 2.24
1664 1795 0.984995 AACTCGAAGGAAGGAAGGGG 59.015 55.000 0.00 0.00 0.00 4.79
1685 1816 4.695455 TCTTCAGAACCGAAATCATGGAAC 59.305 41.667 0.00 0.00 0.00 3.62
1717 1848 2.610833 CGAAGTCCATGTGATGTGATGG 59.389 50.000 0.00 0.00 40.61 3.51
1961 3845 5.123820 TCGAAATGGAATTCATTGTCTGACC 59.876 40.000 7.93 0.00 44.68 4.02
2096 3982 4.937431 GCTGCCCCGGTAGATGGC 62.937 72.222 11.39 11.39 45.56 4.40
2279 4165 7.756722 AGAATTTCTGTAAAATGCTCCGAATTG 59.243 33.333 0.00 0.00 0.00 2.32
2287 4173 5.477984 TGCCTGAGAATTTCTGTAAAATGCT 59.522 36.000 3.03 0.00 0.00 3.79
2301 4187 4.744795 ACGTATCTTTCTGCCTGAGAAT 57.255 40.909 0.00 0.00 40.53 2.40
2321 4207 1.001633 AGGACCGGTTCATGTGTGTAC 59.998 52.381 17.22 0.00 0.00 2.90
2323 4209 0.250295 CAGGACCGGTTCATGTGTGT 60.250 55.000 17.22 0.00 31.00 3.72
2342 4236 3.701241 TGTTTGGCAAACGAGTTCATTC 58.299 40.909 31.23 10.11 44.28 2.67
2343 4237 3.791973 TGTTTGGCAAACGAGTTCATT 57.208 38.095 31.23 0.00 44.28 2.57
2344 4238 4.050553 CAATGTTTGGCAAACGAGTTCAT 58.949 39.130 31.23 18.74 44.28 2.57
2345 4239 3.443037 CAATGTTTGGCAAACGAGTTCA 58.557 40.909 31.23 17.46 44.28 3.18
2532 4430 2.040544 GGTGACAAGGTGATGCCCG 61.041 63.158 0.00 0.00 38.26 6.13
2585 4483 7.461749 TCCACTGAATTTCTACCTCAAGAATT 58.538 34.615 0.00 0.00 35.48 2.17
2595 4493 7.672983 TCAAGAACATCCACTGAATTTCTAC 57.327 36.000 0.00 0.00 29.81 2.59
2623 4521 4.826733 ACAAACCACATAAGAACAGCATCA 59.173 37.500 0.00 0.00 0.00 3.07
2639 4537 2.104170 GAACCTGGAAACCACAAACCA 58.896 47.619 0.00 0.00 0.00 3.67
2671 4572 1.772063 CGAATTTCGCCGACATCCCC 61.772 60.000 5.78 0.00 31.14 4.81
2796 4697 9.350357 TCGAGTTCATTGTAGAAACTTATGTAC 57.650 33.333 0.00 0.00 0.00 2.90
2804 4705 5.817616 TTCGTCGAGTTCATTGTAGAAAC 57.182 39.130 0.00 0.00 0.00 2.78
2805 4706 6.866770 AGATTTCGTCGAGTTCATTGTAGAAA 59.133 34.615 0.00 0.00 0.00 2.52
2812 4713 3.325870 TGCAGATTTCGTCGAGTTCATT 58.674 40.909 0.00 0.00 0.00 2.57
2813 4714 2.926200 CTGCAGATTTCGTCGAGTTCAT 59.074 45.455 8.42 0.00 0.00 2.57
2814 4715 2.288213 ACTGCAGATTTCGTCGAGTTCA 60.288 45.455 23.35 0.00 0.00 3.18
2815 4716 2.329379 ACTGCAGATTTCGTCGAGTTC 58.671 47.619 23.35 0.00 0.00 3.01
2816 4717 2.440539 ACTGCAGATTTCGTCGAGTT 57.559 45.000 23.35 0.00 0.00 3.01
2817 4718 2.288213 TGAACTGCAGATTTCGTCGAGT 60.288 45.455 23.35 0.00 0.00 4.18
2818 4719 2.328473 TGAACTGCAGATTTCGTCGAG 58.672 47.619 23.35 0.00 0.00 4.04
2819 4720 2.432206 TGAACTGCAGATTTCGTCGA 57.568 45.000 23.35 0.00 0.00 4.20
2820 4721 3.218398 GTTTGAACTGCAGATTTCGTCG 58.782 45.455 23.35 0.00 0.00 5.12
2821 4722 4.209452 TGTTTGAACTGCAGATTTCGTC 57.791 40.909 23.35 9.30 0.00 4.20
2822 4723 4.630894 TTGTTTGAACTGCAGATTTCGT 57.369 36.364 23.35 0.00 0.00 3.85
2823 4724 4.383649 CCATTGTTTGAACTGCAGATTTCG 59.616 41.667 23.35 0.24 0.00 3.46
2824 4725 4.151157 GCCATTGTTTGAACTGCAGATTTC 59.849 41.667 23.35 15.25 0.00 2.17
2825 4726 4.060205 GCCATTGTTTGAACTGCAGATTT 58.940 39.130 23.35 4.70 0.00 2.17
2826 4727 3.322828 AGCCATTGTTTGAACTGCAGATT 59.677 39.130 23.35 11.07 0.00 2.40
2827 4728 2.895404 AGCCATTGTTTGAACTGCAGAT 59.105 40.909 23.35 9.01 0.00 2.90
2828 4729 2.309613 AGCCATTGTTTGAACTGCAGA 58.690 42.857 23.35 0.00 0.00 4.26
2829 4730 2.806608 AGCCATTGTTTGAACTGCAG 57.193 45.000 13.48 13.48 0.00 4.41
2830 4731 4.280425 TCATTAGCCATTGTTTGAACTGCA 59.720 37.500 0.00 0.00 0.00 4.41
2831 4732 4.622740 GTCATTAGCCATTGTTTGAACTGC 59.377 41.667 0.00 0.00 0.00 4.40
2832 4733 5.771469 TGTCATTAGCCATTGTTTGAACTG 58.229 37.500 0.00 0.00 0.00 3.16
2833 4734 6.594788 ATGTCATTAGCCATTGTTTGAACT 57.405 33.333 0.00 0.00 0.00 3.01
2834 4735 6.974622 CCTATGTCATTAGCCATTGTTTGAAC 59.025 38.462 0.00 0.00 0.00 3.18
2835 4736 6.889177 TCCTATGTCATTAGCCATTGTTTGAA 59.111 34.615 0.00 0.00 0.00 2.69
2836 4737 6.422333 TCCTATGTCATTAGCCATTGTTTGA 58.578 36.000 0.00 0.00 0.00 2.69
3051 4952 2.549992 GCTGTGGTGATGTGAAGGTGTA 60.550 50.000 0.00 0.00 0.00 2.90
3052 4953 1.815408 GCTGTGGTGATGTGAAGGTGT 60.815 52.381 0.00 0.00 0.00 4.16
3053 4954 0.877071 GCTGTGGTGATGTGAAGGTG 59.123 55.000 0.00 0.00 0.00 4.00
3059 4960 1.135888 CGATGTTGCTGTGGTGATGTG 60.136 52.381 0.00 0.00 0.00 3.21
3082 4983 1.202463 GGGTCAGTGGATGATGAGACG 60.202 57.143 0.00 0.00 40.92 4.18
3120 5021 3.581163 GGTTATCCCCGGCTGAAAA 57.419 52.632 0.00 0.00 0.00 2.29
3204 5114 4.388499 TTCCTTCCTCCGGCGTGC 62.388 66.667 6.01 0.00 0.00 5.34
3205 5115 2.125512 CTTCCTTCCTCCGGCGTG 60.126 66.667 6.01 0.00 0.00 5.34
3206 5116 4.083862 GCTTCCTTCCTCCGGCGT 62.084 66.667 6.01 0.00 0.00 5.68
3208 5118 2.436824 GTGCTTCCTTCCTCCGGC 60.437 66.667 0.00 0.00 0.00 6.13
3209 5119 2.125512 CGTGCTTCCTTCCTCCGG 60.126 66.667 0.00 0.00 0.00 5.14
3210 5120 2.125512 CCGTGCTTCCTTCCTCCG 60.126 66.667 0.00 0.00 0.00 4.63
3211 5121 2.269241 CCCGTGCTTCCTTCCTCC 59.731 66.667 0.00 0.00 0.00 4.30
3212 5122 2.269241 CCCCGTGCTTCCTTCCTC 59.731 66.667 0.00 0.00 0.00 3.71
3213 5123 3.330720 CCCCCGTGCTTCCTTCCT 61.331 66.667 0.00 0.00 0.00 3.36
3408 5318 3.675619 GAACACGATGGACCGGGGG 62.676 68.421 6.32 0.00 37.25 5.40
3459 5369 2.817844 ACCAAAAAGCCCTAACTAAGCG 59.182 45.455 0.00 0.00 0.00 4.68
3488 5398 7.713942 CCTTTTATCACCACTACCTATACCAAC 59.286 40.741 0.00 0.00 0.00 3.77
3562 5472 0.179045 AGGCCACACACACTCTTCAC 60.179 55.000 5.01 0.00 0.00 3.18
3627 5537 4.706962 AGTTATTCCCATTGCCTCTTGTTC 59.293 41.667 0.00 0.00 0.00 3.18
3665 5576 3.119495 ACAAGAAAACACAACCACTCAGC 60.119 43.478 0.00 0.00 0.00 4.26
3706 5618 6.603599 GGCTGAAGGTAAAATGTTTCCTATCT 59.396 38.462 0.00 0.00 33.63 1.98
3774 6764 3.502211 TCAGAAAAAGCTTCATTCCGACC 59.498 43.478 16.96 0.00 0.00 4.79
3788 6778 5.280945 CGTTGCCTCTTTGATTCAGAAAAA 58.719 37.500 0.00 0.00 0.00 1.94
3849 6839 7.444183 TCTGGTAAATTCTTGTGGAAGTAGTTG 59.556 37.037 0.00 0.00 37.36 3.16
3894 7290 3.119137 AGCAGTTCCACAACCAAAGAAAC 60.119 43.478 0.00 0.00 32.22 2.78
3895 7291 3.096092 AGCAGTTCCACAACCAAAGAAA 58.904 40.909 0.00 0.00 32.22 2.52
4132 7534 6.464222 TCTTAGCGAAGATCCAGAAGAAAAA 58.536 36.000 5.03 0.00 36.75 1.94
4211 7613 7.766219 ACATGACCGTACAACACTATTATTC 57.234 36.000 0.00 0.00 0.00 1.75
4249 7654 6.872585 AAAATAATGGCCTGAAGATGGAAA 57.127 33.333 3.32 0.00 0.00 3.13
4287 7692 5.578776 GCATAGAAAATTACCAACGGAAGG 58.421 41.667 0.00 0.00 0.00 3.46
4288 7693 5.263185 CGCATAGAAAATTACCAACGGAAG 58.737 41.667 0.00 0.00 0.00 3.46
4334 7739 7.121315 AGCAGGAACAATATAGAGAAAACCAAC 59.879 37.037 0.00 0.00 0.00 3.77
4338 7743 8.950208 AGTAGCAGGAACAATATAGAGAAAAC 57.050 34.615 0.00 0.00 0.00 2.43
4406 7811 9.577110 CAATACTGTCAATTGTGCTGAATAAAT 57.423 29.630 5.13 0.00 31.13 1.40
4407 7812 8.575589 ACAATACTGTCAATTGTGCTGAATAAA 58.424 29.630 5.13 0.00 43.96 1.40
4408 7813 8.109705 ACAATACTGTCAATTGTGCTGAATAA 57.890 30.769 5.13 0.00 43.96 1.40
4409 7814 7.686438 ACAATACTGTCAATTGTGCTGAATA 57.314 32.000 5.13 0.00 43.96 1.75
4410 7815 6.579666 ACAATACTGTCAATTGTGCTGAAT 57.420 33.333 5.13 0.00 43.96 2.57
4417 7822 7.715249 ACTCAGTTACACAATACTGTCAATTGT 59.285 33.333 5.13 3.66 45.97 2.71
4418 7823 8.087982 ACTCAGTTACACAATACTGTCAATTG 57.912 34.615 0.00 0.00 41.87 2.32
4419 7824 8.677148 AACTCAGTTACACAATACTGTCAATT 57.323 30.769 0.00 0.00 41.87 2.32
4420 7825 8.677148 AAACTCAGTTACACAATACTGTCAAT 57.323 30.769 0.00 0.00 41.87 2.57
4421 7826 9.772973 ATAAACTCAGTTACACAATACTGTCAA 57.227 29.630 0.00 0.00 41.87 3.18
4422 7827 9.772973 AATAAACTCAGTTACACAATACTGTCA 57.227 29.630 0.00 0.00 41.87 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.