Multiple sequence alignment - TraesCS7D01G141500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G141500 chr7D 100.000 2558 0 0 1 2558 90547668 90550225 0.000000e+00 4724.0
1 TraesCS7D01G141500 chr7D 90.811 185 14 3 1618 1801 518927989 518927807 7.070000e-61 244.0
2 TraesCS7D01G141500 chr7D 89.714 175 14 4 1621 1794 628674509 628674680 1.190000e-53 220.0
3 TraesCS7D01G141500 chr7D 96.970 33 1 0 2480 2512 459777306 459777338 3.560000e-04 56.5
4 TraesCS7D01G141500 chr7B 94.021 485 25 2 761 1245 41315046 41315526 0.000000e+00 732.0
5 TraesCS7D01G141500 chr7B 89.695 262 21 5 1365 1623 41316875 41317133 1.900000e-86 329.0
6 TraesCS7D01G141500 chr7B 87.629 194 19 3 1808 1996 41317133 41317326 1.190000e-53 220.0
7 TraesCS7D01G141500 chr7B 93.814 97 6 0 2462 2558 41318295 41318391 2.050000e-31 147.0
8 TraesCS7D01G141500 chr4B 89.962 528 45 7 5 528 115540304 115539781 0.000000e+00 675.0
9 TraesCS7D01G141500 chr4B 89.943 527 42 8 5 528 59201426 59201944 0.000000e+00 669.0
10 TraesCS7D01G141500 chrUn 88.148 540 42 16 5 539 251746191 251746713 7.770000e-175 623.0
11 TraesCS7D01G141500 chr4A 88.148 540 42 15 5 539 695680800 695680278 7.770000e-175 623.0
12 TraesCS7D01G141500 chr4A 85.902 532 47 13 5 533 666023656 666023150 2.240000e-150 542.0
13 TraesCS7D01G141500 chr4D 88.180 533 39 12 5 533 456272832 456273344 4.680000e-172 614.0
14 TraesCS7D01G141500 chr4D 88.202 178 19 2 1624 1800 20232087 20231911 7.170000e-51 211.0
15 TraesCS7D01G141500 chr7A 82.902 386 41 16 2008 2369 91859169 91859553 8.830000e-85 324.0
16 TraesCS7D01G141500 chr7A 90.230 174 17 0 1621 1794 721066860 721067033 7.120000e-56 228.0
17 TraesCS7D01G141500 chr7A 91.304 92 6 2 2467 2558 91859644 91859733 9.610000e-25 124.0
18 TraesCS7D01G141500 chr7A 89.552 67 5 2 2406 2470 91859552 91859618 1.630000e-12 84.2
19 TraesCS7D01G141500 chr6A 90.341 176 17 0 1623 1798 234145200 234145025 5.500000e-57 231.0
20 TraesCS7D01G141500 chr3A 88.947 190 17 4 1617 1804 37342022 37342209 5.500000e-57 231.0
21 TraesCS7D01G141500 chr3A 90.533 169 16 0 1624 1792 76547392 76547224 9.210000e-55 224.0
22 TraesCS7D01G141500 chr3A 100.000 28 0 0 2409 2436 674340481 674340454 5.000000e-03 52.8
23 TraesCS7D01G141500 chr2D 90.643 171 16 0 1624 1794 7651358 7651188 7.120000e-56 228.0
24 TraesCS7D01G141500 chr5D 89.143 175 19 0 1623 1797 481732343 481732169 4.290000e-53 219.0
25 TraesCS7D01G141500 chr3B 97.619 42 0 1 413 454 791408065 791408025 1.270000e-08 71.3
26 TraesCS7D01G141500 chr5B 100.000 30 0 0 2409 2438 382781919 382781890 3.560000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G141500 chr7D 90547668 90550225 2557 False 4724 4724 100.00000 1 2558 1 chr7D.!!$F1 2557
1 TraesCS7D01G141500 chr7B 41315046 41318391 3345 False 357 732 91.28975 761 2558 4 chr7B.!!$F1 1797
2 TraesCS7D01G141500 chr4B 115539781 115540304 523 True 675 675 89.96200 5 528 1 chr4B.!!$R1 523
3 TraesCS7D01G141500 chr4B 59201426 59201944 518 False 669 669 89.94300 5 528 1 chr4B.!!$F1 523
4 TraesCS7D01G141500 chrUn 251746191 251746713 522 False 623 623 88.14800 5 539 1 chrUn.!!$F1 534
5 TraesCS7D01G141500 chr4A 695680278 695680800 522 True 623 623 88.14800 5 539 1 chr4A.!!$R2 534
6 TraesCS7D01G141500 chr4A 666023150 666023656 506 True 542 542 85.90200 5 533 1 chr4A.!!$R1 528
7 TraesCS7D01G141500 chr4D 456272832 456273344 512 False 614 614 88.18000 5 533 1 chr4D.!!$F1 528

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
702 710 0.03759 TAAACATGCCCGGCTTCAGT 59.962 50.0 11.61 0.91 0.0 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1677 3013 0.036448 AGACCGCTATAGCTCCGCTA 59.964 55.0 21.98 0.0 45.55 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
92 94 6.735263 TTTTAACGTGGTTCGCAATTTAAG 57.265 33.333 0.00 0.00 44.19 1.85
533 541 2.568062 TGTGTGTTAATAAGAGGCCCGA 59.432 45.455 0.00 0.00 0.00 5.14
534 542 3.008157 TGTGTGTTAATAAGAGGCCCGAA 59.992 43.478 0.00 0.00 0.00 4.30
535 543 3.621715 GTGTGTTAATAAGAGGCCCGAAG 59.378 47.826 0.00 0.00 0.00 3.79
536 544 2.612672 GTGTTAATAAGAGGCCCGAAGC 59.387 50.000 0.00 0.00 42.60 3.86
537 545 2.504175 TGTTAATAAGAGGCCCGAAGCT 59.496 45.455 0.00 0.00 43.05 3.74
538 546 3.707611 TGTTAATAAGAGGCCCGAAGCTA 59.292 43.478 0.00 0.00 43.05 3.32
539 547 2.912690 AATAAGAGGCCCGAAGCTAC 57.087 50.000 0.00 0.00 43.05 3.58
540 548 2.089600 ATAAGAGGCCCGAAGCTACT 57.910 50.000 0.00 0.00 43.05 2.57
541 549 1.112113 TAAGAGGCCCGAAGCTACTG 58.888 55.000 0.00 0.00 43.05 2.74
542 550 1.617947 AAGAGGCCCGAAGCTACTGG 61.618 60.000 0.00 0.00 43.05 4.00
543 551 2.284699 AGGCCCGAAGCTACTGGT 60.285 61.111 0.00 0.00 43.05 4.00
544 552 2.125106 GGCCCGAAGCTACTGGTG 60.125 66.667 0.00 0.00 43.05 4.17
545 553 2.125106 GCCCGAAGCTACTGGTGG 60.125 66.667 0.00 0.00 38.99 4.61
546 554 2.656069 GCCCGAAGCTACTGGTGGA 61.656 63.158 0.00 0.00 38.99 4.02
547 555 1.972660 GCCCGAAGCTACTGGTGGAT 61.973 60.000 0.00 0.00 38.99 3.41
548 556 0.179073 CCCGAAGCTACTGGTGGATG 60.179 60.000 0.00 0.00 0.00 3.51
549 557 0.824109 CCGAAGCTACTGGTGGATGA 59.176 55.000 0.00 0.00 0.00 2.92
550 558 1.414181 CCGAAGCTACTGGTGGATGAT 59.586 52.381 0.00 0.00 0.00 2.45
551 559 2.477825 CGAAGCTACTGGTGGATGATG 58.522 52.381 0.00 0.00 0.00 3.07
552 560 2.216898 GAAGCTACTGGTGGATGATGC 58.783 52.381 0.00 0.00 0.00 3.91
553 561 1.206878 AGCTACTGGTGGATGATGCA 58.793 50.000 0.00 0.00 0.00 3.96
554 562 1.134280 AGCTACTGGTGGATGATGCAC 60.134 52.381 8.69 8.69 38.03 4.57
555 563 1.407299 GCTACTGGTGGATGATGCACA 60.407 52.381 18.65 4.49 40.73 4.57
556 564 2.747467 GCTACTGGTGGATGATGCACAT 60.747 50.000 18.65 6.23 40.73 3.21
557 565 3.494924 GCTACTGGTGGATGATGCACATA 60.495 47.826 18.65 6.29 40.73 2.29
558 566 2.923121 ACTGGTGGATGATGCACATAC 58.077 47.619 18.65 2.35 40.73 2.39
559 567 2.224606 CTGGTGGATGATGCACATACC 58.775 52.381 18.65 1.94 40.73 2.73
560 568 1.845791 TGGTGGATGATGCACATACCT 59.154 47.619 18.65 0.00 40.73 3.08
561 569 3.044894 TGGTGGATGATGCACATACCTA 58.955 45.455 18.65 0.00 40.73 3.08
562 570 3.181455 TGGTGGATGATGCACATACCTAC 60.181 47.826 18.65 0.23 40.73 3.18
563 571 3.059884 GTGGATGATGCACATACCTACG 58.940 50.000 12.37 0.00 38.98 3.51
564 572 2.962421 TGGATGATGCACATACCTACGA 59.038 45.455 8.45 0.00 38.98 3.43
565 573 3.386402 TGGATGATGCACATACCTACGAA 59.614 43.478 8.45 0.00 38.98 3.85
566 574 4.141824 TGGATGATGCACATACCTACGAAA 60.142 41.667 8.45 0.00 38.98 3.46
567 575 4.449068 GGATGATGCACATACCTACGAAAG 59.551 45.833 0.00 0.00 39.56 2.62
568 576 5.023533 ATGATGCACATACCTACGAAAGT 57.976 39.130 0.00 0.00 42.29 2.66
569 577 4.827692 TGATGCACATACCTACGAAAGTT 58.172 39.130 0.00 0.00 46.40 2.66
570 578 4.629634 TGATGCACATACCTACGAAAGTTG 59.370 41.667 0.00 0.00 46.40 3.16
571 579 3.997762 TGCACATACCTACGAAAGTTGT 58.002 40.909 0.00 0.00 46.40 3.32
572 580 3.743911 TGCACATACCTACGAAAGTTGTG 59.256 43.478 0.00 0.00 46.40 3.33
573 581 3.991773 GCACATACCTACGAAAGTTGTGA 59.008 43.478 14.95 0.00 46.40 3.58
574 582 4.449743 GCACATACCTACGAAAGTTGTGAA 59.550 41.667 14.95 0.00 46.40 3.18
575 583 5.049954 GCACATACCTACGAAAGTTGTGAAA 60.050 40.000 14.95 0.00 46.40 2.69
576 584 6.348213 GCACATACCTACGAAAGTTGTGAAAT 60.348 38.462 14.95 0.00 46.40 2.17
577 585 7.148540 GCACATACCTACGAAAGTTGTGAAATA 60.149 37.037 14.95 0.00 46.40 1.40
578 586 8.714179 CACATACCTACGAAAGTTGTGAAATAA 58.286 33.333 0.00 0.00 46.40 1.40
579 587 9.275398 ACATACCTACGAAAGTTGTGAAATAAA 57.725 29.630 0.00 0.00 46.40 1.40
583 591 8.680001 ACCTACGAAAGTTGTGAAATAAAAAGT 58.320 29.630 0.00 0.00 46.40 2.66
584 592 8.953990 CCTACGAAAGTTGTGAAATAAAAAGTG 58.046 33.333 0.00 0.00 46.40 3.16
585 593 9.710979 CTACGAAAGTTGTGAAATAAAAAGTGA 57.289 29.630 0.00 0.00 46.40 3.41
586 594 8.973835 ACGAAAGTTGTGAAATAAAAAGTGAA 57.026 26.923 0.00 0.00 46.40 3.18
587 595 8.856247 ACGAAAGTTGTGAAATAAAAAGTGAAC 58.144 29.630 0.00 0.00 46.40 3.18
588 596 9.072294 CGAAAGTTGTGAAATAAAAAGTGAACT 57.928 29.630 0.00 0.00 0.00 3.01
617 625 9.486497 AGTTATCTATGATCATGTAGTTGCTTG 57.514 33.333 18.72 0.00 0.00 4.01
618 626 8.715998 GTTATCTATGATCATGTAGTTGCTTGG 58.284 37.037 18.72 0.00 0.00 3.61
619 627 6.484364 TCTATGATCATGTAGTTGCTTGGA 57.516 37.500 18.72 0.00 0.00 3.53
620 628 7.071069 TCTATGATCATGTAGTTGCTTGGAT 57.929 36.000 18.72 0.00 0.00 3.41
621 629 7.157347 TCTATGATCATGTAGTTGCTTGGATC 58.843 38.462 18.72 0.00 0.00 3.36
622 630 4.454678 TGATCATGTAGTTGCTTGGATCC 58.545 43.478 4.20 4.20 0.00 3.36
623 631 3.998913 TCATGTAGTTGCTTGGATCCA 57.001 42.857 11.44 11.44 0.00 3.41
624 632 3.877559 TCATGTAGTTGCTTGGATCCAG 58.122 45.455 15.53 10.43 0.00 3.86
625 633 3.264193 TCATGTAGTTGCTTGGATCCAGT 59.736 43.478 15.53 0.00 0.00 4.00
626 634 3.057969 TGTAGTTGCTTGGATCCAGTG 57.942 47.619 15.53 13.00 0.00 3.66
627 635 2.371841 TGTAGTTGCTTGGATCCAGTGT 59.628 45.455 15.53 0.71 0.00 3.55
628 636 1.901591 AGTTGCTTGGATCCAGTGTG 58.098 50.000 15.53 8.01 0.00 3.82
629 637 0.883833 GTTGCTTGGATCCAGTGTGG 59.116 55.000 15.53 5.58 39.43 4.17
630 638 0.251297 TTGCTTGGATCCAGTGTGGG 60.251 55.000 15.53 3.88 38.32 4.61
631 639 1.380302 GCTTGGATCCAGTGTGGGT 59.620 57.895 15.53 0.00 38.32 4.51
632 640 0.962356 GCTTGGATCCAGTGTGGGTG 60.962 60.000 15.53 0.86 38.32 4.61
633 641 0.322816 CTTGGATCCAGTGTGGGTGG 60.323 60.000 15.53 0.00 38.32 4.61
634 642 1.788518 TTGGATCCAGTGTGGGTGGG 61.789 60.000 15.53 0.00 38.32 4.61
635 643 2.044946 GATCCAGTGTGGGTGGGC 60.045 66.667 0.00 0.00 38.32 5.36
636 644 3.645268 GATCCAGTGTGGGTGGGCC 62.645 68.421 0.00 0.00 38.32 5.80
637 645 4.918360 TCCAGTGTGGGTGGGCCT 62.918 66.667 4.53 0.00 38.32 5.19
638 646 3.902112 CCAGTGTGGGTGGGCCTT 61.902 66.667 4.53 0.00 32.67 4.35
639 647 2.198426 CAGTGTGGGTGGGCCTTT 59.802 61.111 4.53 0.00 34.45 3.11
640 648 1.457455 CAGTGTGGGTGGGCCTTTT 60.457 57.895 4.53 0.00 34.45 2.27
641 649 1.152546 AGTGTGGGTGGGCCTTTTC 60.153 57.895 4.53 0.00 34.45 2.29
642 650 1.152546 GTGTGGGTGGGCCTTTTCT 60.153 57.895 4.53 0.00 34.45 2.52
643 651 0.759060 GTGTGGGTGGGCCTTTTCTT 60.759 55.000 4.53 0.00 34.45 2.52
644 652 0.469144 TGTGGGTGGGCCTTTTCTTC 60.469 55.000 4.53 0.00 34.45 2.87
645 653 1.155155 TGGGTGGGCCTTTTCTTCC 59.845 57.895 4.53 0.00 34.45 3.46
646 654 1.155155 GGGTGGGCCTTTTCTTCCA 59.845 57.895 4.53 0.00 34.45 3.53
647 655 0.252239 GGGTGGGCCTTTTCTTCCAT 60.252 55.000 4.53 0.00 34.45 3.41
648 656 0.897621 GGTGGGCCTTTTCTTCCATG 59.102 55.000 4.53 0.00 0.00 3.66
649 657 1.549950 GGTGGGCCTTTTCTTCCATGA 60.550 52.381 4.53 0.00 0.00 3.07
650 658 2.460669 GTGGGCCTTTTCTTCCATGAT 58.539 47.619 4.53 0.00 0.00 2.45
651 659 2.428530 GTGGGCCTTTTCTTCCATGATC 59.571 50.000 4.53 0.00 0.00 2.92
652 660 2.042842 TGGGCCTTTTCTTCCATGATCA 59.957 45.455 4.53 0.00 0.00 2.92
653 661 2.428530 GGGCCTTTTCTTCCATGATCAC 59.571 50.000 0.84 0.00 0.00 3.06
654 662 3.091545 GGCCTTTTCTTCCATGATCACA 58.908 45.455 0.00 0.00 0.00 3.58
655 663 3.703052 GGCCTTTTCTTCCATGATCACAT 59.297 43.478 0.00 0.00 37.19 3.21
656 664 4.889409 GGCCTTTTCTTCCATGATCACATA 59.111 41.667 0.00 0.00 35.09 2.29
657 665 5.537674 GGCCTTTTCTTCCATGATCACATAT 59.462 40.000 0.00 0.00 35.09 1.78
658 666 6.716628 GGCCTTTTCTTCCATGATCACATATA 59.283 38.462 0.00 0.00 35.09 0.86
659 667 7.231317 GGCCTTTTCTTCCATGATCACATATAA 59.769 37.037 0.00 0.00 35.09 0.98
660 668 8.800332 GCCTTTTCTTCCATGATCACATATAAT 58.200 33.333 0.00 0.00 35.09 1.28
691 699 6.124088 ACCGAAGATCAAATCTAAACATGC 57.876 37.500 0.00 0.00 39.08 4.06
692 700 5.066505 ACCGAAGATCAAATCTAAACATGCC 59.933 40.000 0.00 0.00 39.08 4.40
693 701 5.506317 CCGAAGATCAAATCTAAACATGCCC 60.506 44.000 0.00 0.00 39.08 5.36
694 702 5.505173 AAGATCAAATCTAAACATGCCCG 57.495 39.130 0.00 0.00 39.08 6.13
695 703 3.885297 AGATCAAATCTAAACATGCCCGG 59.115 43.478 0.00 0.00 38.00 5.73
696 704 1.748493 TCAAATCTAAACATGCCCGGC 59.252 47.619 1.04 1.04 0.00 6.13
697 705 1.750778 CAAATCTAAACATGCCCGGCT 59.249 47.619 11.61 0.00 0.00 5.52
698 706 2.143876 AATCTAAACATGCCCGGCTT 57.856 45.000 11.61 0.47 0.00 4.35
699 707 1.680338 ATCTAAACATGCCCGGCTTC 58.320 50.000 11.61 0.00 0.00 3.86
700 708 0.326595 TCTAAACATGCCCGGCTTCA 59.673 50.000 11.61 0.00 0.00 3.02
701 709 0.734889 CTAAACATGCCCGGCTTCAG 59.265 55.000 11.61 0.26 0.00 3.02
702 710 0.037590 TAAACATGCCCGGCTTCAGT 59.962 50.000 11.61 0.91 0.00 3.41
703 711 1.526575 AAACATGCCCGGCTTCAGTG 61.527 55.000 11.61 4.60 0.00 3.66
704 712 2.046023 CATGCCCGGCTTCAGTGA 60.046 61.111 11.61 0.00 0.00 3.41
705 713 1.452651 CATGCCCGGCTTCAGTGAT 60.453 57.895 11.61 0.00 0.00 3.06
706 714 1.452651 ATGCCCGGCTTCAGTGATG 60.453 57.895 11.61 0.00 0.00 3.07
707 715 3.512516 GCCCGGCTTCAGTGATGC 61.513 66.667 19.95 19.95 32.92 3.91
708 716 2.046023 CCCGGCTTCAGTGATGCA 60.046 61.111 26.74 0.00 34.94 3.96
709 717 1.675310 CCCGGCTTCAGTGATGCAA 60.675 57.895 26.74 0.00 34.94 4.08
710 718 1.033746 CCCGGCTTCAGTGATGCAAT 61.034 55.000 26.74 0.00 34.94 3.56
711 719 0.813184 CCGGCTTCAGTGATGCAATT 59.187 50.000 26.74 0.00 34.94 2.32
712 720 1.203052 CCGGCTTCAGTGATGCAATTT 59.797 47.619 26.74 0.00 34.94 1.82
713 721 2.353011 CCGGCTTCAGTGATGCAATTTT 60.353 45.455 26.74 0.00 34.94 1.82
714 722 3.319755 CGGCTTCAGTGATGCAATTTTT 58.680 40.909 26.74 0.00 34.94 1.94
715 723 3.122278 CGGCTTCAGTGATGCAATTTTTG 59.878 43.478 26.74 8.24 34.94 2.44
716 724 4.309099 GGCTTCAGTGATGCAATTTTTGA 58.691 39.130 26.74 0.00 34.94 2.69
717 725 4.387862 GGCTTCAGTGATGCAATTTTTGAG 59.612 41.667 26.74 4.78 34.94 3.02
718 726 4.143179 GCTTCAGTGATGCAATTTTTGAGC 60.143 41.667 22.41 7.56 33.71 4.26
719 727 3.916761 TCAGTGATGCAATTTTTGAGCC 58.083 40.909 0.00 0.00 0.00 4.70
720 728 3.321396 TCAGTGATGCAATTTTTGAGCCA 59.679 39.130 0.00 0.00 0.00 4.75
721 729 4.059511 CAGTGATGCAATTTTTGAGCCAA 58.940 39.130 0.00 0.00 0.00 4.52
722 730 4.693566 CAGTGATGCAATTTTTGAGCCAAT 59.306 37.500 0.00 0.00 0.00 3.16
723 731 4.933400 AGTGATGCAATTTTTGAGCCAATC 59.067 37.500 0.00 0.00 0.00 2.67
724 732 3.927758 TGATGCAATTTTTGAGCCAATCG 59.072 39.130 0.00 0.00 0.00 3.34
725 733 2.686235 TGCAATTTTTGAGCCAATCGG 58.314 42.857 0.00 0.00 0.00 4.18
726 734 2.298446 TGCAATTTTTGAGCCAATCGGA 59.702 40.909 0.00 0.00 0.00 4.55
727 735 3.244009 TGCAATTTTTGAGCCAATCGGAA 60.244 39.130 0.00 0.00 0.00 4.30
728 736 3.123453 GCAATTTTTGAGCCAATCGGAAC 59.877 43.478 0.00 0.00 0.00 3.62
729 737 4.305769 CAATTTTTGAGCCAATCGGAACA 58.694 39.130 0.00 0.00 0.00 3.18
730 738 4.599047 ATTTTTGAGCCAATCGGAACAA 57.401 36.364 0.00 0.00 0.00 2.83
731 739 4.392921 TTTTTGAGCCAATCGGAACAAA 57.607 36.364 0.00 0.00 35.40 2.83
732 740 3.641437 TTTGAGCCAATCGGAACAAAG 57.359 42.857 0.00 0.00 35.40 2.77
733 741 2.270352 TGAGCCAATCGGAACAAAGT 57.730 45.000 0.00 0.00 0.00 2.66
734 742 2.151202 TGAGCCAATCGGAACAAAGTC 58.849 47.619 0.00 0.00 0.00 3.01
735 743 2.151202 GAGCCAATCGGAACAAAGTCA 58.849 47.619 0.00 0.00 0.00 3.41
736 744 2.154462 AGCCAATCGGAACAAAGTCAG 58.846 47.619 0.00 0.00 0.00 3.51
737 745 2.151202 GCCAATCGGAACAAAGTCAGA 58.849 47.619 0.00 0.00 0.00 3.27
738 746 2.552315 GCCAATCGGAACAAAGTCAGAA 59.448 45.455 0.00 0.00 0.00 3.02
739 747 3.609409 GCCAATCGGAACAAAGTCAGAAC 60.609 47.826 0.00 0.00 0.00 3.01
740 748 3.815401 CCAATCGGAACAAAGTCAGAACT 59.185 43.478 0.00 0.00 37.32 3.01
741 749 4.994852 CCAATCGGAACAAAGTCAGAACTA 59.005 41.667 0.00 0.00 33.48 2.24
742 750 5.120830 CCAATCGGAACAAAGTCAGAACTAG 59.879 44.000 0.00 0.00 33.48 2.57
743 751 3.650139 TCGGAACAAAGTCAGAACTAGC 58.350 45.455 0.00 0.00 33.48 3.42
744 752 3.321111 TCGGAACAAAGTCAGAACTAGCT 59.679 43.478 0.00 0.00 33.48 3.32
745 753 4.521639 TCGGAACAAAGTCAGAACTAGCTA 59.478 41.667 0.00 0.00 33.48 3.32
746 754 4.621886 CGGAACAAAGTCAGAACTAGCTAC 59.378 45.833 0.00 0.00 33.48 3.58
747 755 4.930405 GGAACAAAGTCAGAACTAGCTACC 59.070 45.833 0.00 0.00 33.48 3.18
748 756 5.510861 GGAACAAAGTCAGAACTAGCTACCA 60.511 44.000 0.00 0.00 33.48 3.25
749 757 5.140747 ACAAAGTCAGAACTAGCTACCAG 57.859 43.478 0.00 0.00 33.48 4.00
750 758 4.021016 ACAAAGTCAGAACTAGCTACCAGG 60.021 45.833 0.00 0.00 33.48 4.45
751 759 2.104170 AGTCAGAACTAGCTACCAGGC 58.896 52.381 0.00 0.00 32.59 4.85
752 760 1.137282 GTCAGAACTAGCTACCAGGCC 59.863 57.143 0.00 0.00 0.00 5.19
753 761 0.466124 CAGAACTAGCTACCAGGCCC 59.534 60.000 0.00 0.00 0.00 5.80
754 762 0.340208 AGAACTAGCTACCAGGCCCT 59.660 55.000 0.00 0.00 0.00 5.19
755 763 1.205055 GAACTAGCTACCAGGCCCTT 58.795 55.000 0.00 0.00 0.00 3.95
756 764 1.139256 GAACTAGCTACCAGGCCCTTC 59.861 57.143 0.00 0.00 0.00 3.46
757 765 1.043673 ACTAGCTACCAGGCCCTTCG 61.044 60.000 0.00 0.00 0.00 3.79
758 766 1.001248 TAGCTACCAGGCCCTTCGT 59.999 57.895 0.00 0.00 0.00 3.85
759 767 1.041447 TAGCTACCAGGCCCTTCGTC 61.041 60.000 0.00 0.00 0.00 4.20
769 777 2.103263 AGGCCCTTCGTCAATCTCATAC 59.897 50.000 0.00 0.00 0.00 2.39
770 778 2.128035 GCCCTTCGTCAATCTCATACG 58.872 52.381 0.00 0.00 37.96 3.06
771 779 2.743938 CCCTTCGTCAATCTCATACGG 58.256 52.381 0.00 0.00 37.24 4.02
772 780 2.361119 CCCTTCGTCAATCTCATACGGA 59.639 50.000 0.00 0.00 37.24 4.69
773 781 3.372954 CCTTCGTCAATCTCATACGGAC 58.627 50.000 0.00 0.00 37.24 4.79
782 790 0.852777 CTCATACGGACGCCAAATCG 59.147 55.000 0.00 0.00 0.00 3.34
864 872 0.460284 CTCTGTCATGTACGGCACCC 60.460 60.000 0.00 0.00 34.14 4.61
871 879 2.091541 CATGTACGGCACCCTTGAATT 58.908 47.619 0.00 0.00 0.00 2.17
877 885 2.556622 ACGGCACCCTTGAATTAACAAG 59.443 45.455 0.00 0.00 44.50 3.16
882 890 5.279456 GGCACCCTTGAATTAACAAGACATT 60.279 40.000 8.15 0.00 46.85 2.71
883 891 5.634859 GCACCCTTGAATTAACAAGACATTG 59.365 40.000 8.15 2.36 46.85 2.82
894 902 8.891671 ATTAACAAGACATTGCTTCATTTTGT 57.108 26.923 0.00 0.00 40.27 2.83
899 907 4.341806 AGACATTGCTTCATTTTGTCCACA 59.658 37.500 0.00 0.00 37.91 4.17
947 955 3.588955 GGGTTGCTTCATTTTGTCCATC 58.411 45.455 0.00 0.00 0.00 3.51
970 978 1.538047 ACTGCCTGTACATTGCAAGG 58.462 50.000 17.70 10.01 34.06 3.61
971 979 1.202927 ACTGCCTGTACATTGCAAGGT 60.203 47.619 21.58 21.58 34.06 3.50
999 1007 7.277396 GCACCTAGCTAGATAGTATAGTAGCT 58.723 42.308 22.70 21.75 44.79 3.32
1011 1019 9.689501 GATAGTATAGTAGCTATGTTCTTCCCT 57.310 37.037 0.00 0.00 0.00 4.20
1075 1083 1.857318 CGACGACAGAGACCACAGCT 61.857 60.000 0.00 0.00 0.00 4.24
1089 1097 1.970114 CAGCTTGGTGGTGCTCCTG 60.970 63.158 6.34 0.00 37.44 3.86
1140 1148 3.426117 CTACCTCATCGCCGGCGTT 62.426 63.158 44.16 35.50 40.74 4.84
1192 1200 1.516603 GCGGTCTCGTTCTGCTACC 60.517 63.158 0.00 0.00 38.89 3.18
1245 1253 2.202324 GAGGTCGTCGTCGTCAGC 60.202 66.667 1.33 0.00 38.33 4.26
1281 2615 4.329545 AACGGTGGCCTGCGTCAT 62.330 61.111 3.32 0.00 0.00 3.06
1282 2616 4.760047 ACGGTGGCCTGCGTCATC 62.760 66.667 3.32 0.00 0.00 2.92
1284 2618 4.101448 GGTGGCCTGCGTCATCCT 62.101 66.667 3.32 0.00 0.00 3.24
1285 2619 2.821366 GTGGCCTGCGTCATCCTG 60.821 66.667 3.32 0.00 0.00 3.86
1286 2620 3.002583 TGGCCTGCGTCATCCTGA 61.003 61.111 3.32 0.00 0.00 3.86
1287 2621 2.512515 GGCCTGCGTCATCCTGAC 60.513 66.667 0.00 0.00 43.65 3.51
1288 2622 2.512515 GCCTGCGTCATCCTGACC 60.513 66.667 1.90 0.00 44.20 4.02
1289 2623 2.187946 CCTGCGTCATCCTGACCC 59.812 66.667 1.90 0.00 44.20 4.46
1290 2624 2.187946 CTGCGTCATCCTGACCCC 59.812 66.667 1.90 0.00 44.20 4.95
1291 2625 3.723235 CTGCGTCATCCTGACCCCG 62.723 68.421 1.90 0.00 44.20 5.73
1293 2627 4.530857 CGTCATCCTGACCCCGCC 62.531 72.222 1.90 0.00 44.20 6.13
1294 2628 4.530857 GTCATCCTGACCCCGCCG 62.531 72.222 0.00 0.00 41.37 6.46
1296 2630 4.838152 CATCCTGACCCCGCCGTG 62.838 72.222 0.00 0.00 0.00 4.94
1300 2634 4.308458 CTGACCCCGCCGTGTCAA 62.308 66.667 7.88 0.00 40.71 3.18
1301 2635 4.308458 TGACCCCGCCGTGTCAAG 62.308 66.667 4.48 0.00 38.48 3.02
1309 2643 2.342279 CCGTGTCAAGGCTTCCGA 59.658 61.111 0.00 0.00 0.00 4.55
1310 2644 2.027625 CCGTGTCAAGGCTTCCGAC 61.028 63.158 10.01 10.01 0.00 4.79
1311 2645 2.372690 CGTGTCAAGGCTTCCGACG 61.373 63.158 11.66 9.33 32.17 5.12
1312 2646 1.300697 GTGTCAAGGCTTCCGACGT 60.301 57.895 11.66 0.00 32.17 4.34
1313 2647 0.878961 GTGTCAAGGCTTCCGACGTT 60.879 55.000 11.66 0.00 32.17 3.99
1314 2648 0.599204 TGTCAAGGCTTCCGACGTTC 60.599 55.000 11.66 0.00 32.17 3.95
1315 2649 1.005394 TCAAGGCTTCCGACGTTCC 60.005 57.895 0.00 0.00 0.00 3.62
1316 2650 2.033194 CAAGGCTTCCGACGTTCCC 61.033 63.158 0.00 0.00 0.00 3.97
1317 2651 3.584868 AAGGCTTCCGACGTTCCCG 62.585 63.158 0.00 0.00 40.83 5.14
1332 2666 2.901042 CCGTACAAGAGGGAGGGC 59.099 66.667 0.00 0.00 34.80 5.19
1333 2667 2.494918 CGTACAAGAGGGAGGGCG 59.505 66.667 0.00 0.00 0.00 6.13
1334 2668 2.901042 GTACAAGAGGGAGGGCGG 59.099 66.667 0.00 0.00 0.00 6.13
1335 2669 3.081409 TACAAGAGGGAGGGCGGC 61.081 66.667 0.00 0.00 0.00 6.53
1417 2751 3.148279 AGGTCGGCGAGATGGTCC 61.148 66.667 11.20 6.89 0.00 4.46
1455 2789 2.024176 AGCATATGTTCCACGTGGAC 57.976 50.000 36.40 28.20 45.39 4.02
1461 2795 2.028484 TTCCACGTGGACTGCGTC 59.972 61.111 36.40 0.79 45.39 5.19
1469 2803 3.097728 GGACTGCGTCGACGTGTG 61.098 66.667 35.48 26.48 42.22 3.82
1503 2837 4.530857 ACGTGCCCTATCTGCCGC 62.531 66.667 0.00 0.00 0.00 6.53
1509 2843 2.659897 CCTATCTGCCGCGCTGTC 60.660 66.667 5.56 0.00 0.00 3.51
1536 2870 3.680786 CTCACCGTCGGGCAGTCA 61.681 66.667 17.28 0.00 36.48 3.41
1539 2873 2.680352 ACCGTCGGGCAGTCATCT 60.680 61.111 17.28 0.00 36.48 2.90
1558 2892 3.682292 GAGCCGCCTCCCGTTTGAT 62.682 63.158 0.00 0.00 34.38 2.57
1574 2910 4.669809 ATTTGTTGGCCGGCCCGA 62.670 61.111 41.75 27.87 35.87 5.14
1583 2919 4.733542 CCGGCCCGAACCATTGGT 62.734 66.667 3.71 1.37 37.65 3.67
1600 2936 5.943416 CCATTGGTGGTTCATACAAGAACTA 59.057 40.000 6.77 0.00 45.52 2.24
1605 2941 4.091509 GTGGTTCATACAAGAACTAGTGCG 59.908 45.833 0.00 0.00 45.52 5.34
1623 2959 5.792631 AGTGCGTAAATCGTAGTTAAATGC 58.207 37.500 0.00 0.00 42.13 3.56
1625 2961 6.016718 GTGCGTAAATCGTAGTTAAATGCAA 58.983 36.000 0.00 0.00 42.13 4.08
1627 2963 6.684979 TGCGTAAATCGTAGTTAAATGCAATG 59.315 34.615 0.00 0.00 42.13 2.82
1628 2964 6.685403 GCGTAAATCGTAGTTAAATGCAATGT 59.315 34.615 0.00 0.00 42.13 2.71
1629 2965 7.217447 GCGTAAATCGTAGTTAAATGCAATGTT 59.783 33.333 0.00 0.00 42.13 2.71
1630 2966 9.057365 CGTAAATCGTAGTTAAATGCAATGTTT 57.943 29.630 0.00 0.00 34.52 2.83
1640 2976 8.868916 AGTTAAATGCAATGTTTTAAATAGCGG 58.131 29.630 4.89 0.00 31.21 5.52
1641 2977 6.660887 AAATGCAATGTTTTAAATAGCGGG 57.339 33.333 0.00 0.00 0.00 6.13
1642 2978 3.516615 TGCAATGTTTTAAATAGCGGGC 58.483 40.909 0.00 0.00 0.00 6.13
1643 2979 3.194542 TGCAATGTTTTAAATAGCGGGCT 59.805 39.130 0.00 0.00 0.00 5.19
1644 2980 4.399618 TGCAATGTTTTAAATAGCGGGCTA 59.600 37.500 2.42 2.42 0.00 3.93
1645 2981 5.068460 TGCAATGTTTTAAATAGCGGGCTAT 59.932 36.000 7.36 7.36 40.63 2.97
1646 2982 5.402270 GCAATGTTTTAAATAGCGGGCTATG 59.598 40.000 13.53 0.89 39.03 2.23
1647 2983 5.705609 ATGTTTTAAATAGCGGGCTATGG 57.294 39.130 13.53 0.00 39.03 2.74
1648 2984 4.783055 TGTTTTAAATAGCGGGCTATGGA 58.217 39.130 13.53 2.82 39.03 3.41
1649 2985 5.194432 TGTTTTAAATAGCGGGCTATGGAA 58.806 37.500 13.53 8.30 39.03 3.53
1650 2986 5.652891 TGTTTTAAATAGCGGGCTATGGAAA 59.347 36.000 13.53 12.97 39.03 3.13
1651 2987 6.153000 TGTTTTAAATAGCGGGCTATGGAAAA 59.847 34.615 13.53 17.02 39.03 2.29
1652 2988 6.969993 TTTAAATAGCGGGCTATGGAAAAT 57.030 33.333 13.53 0.00 39.03 1.82
1653 2989 8.354426 GTTTTAAATAGCGGGCTATGGAAAATA 58.646 33.333 22.50 9.79 39.03 1.40
1654 2990 8.466617 TTTAAATAGCGGGCTATGGAAAATAA 57.533 30.769 13.53 5.13 39.03 1.40
1655 2991 5.959618 AATAGCGGGCTATGGAAAATAAC 57.040 39.130 13.53 0.00 39.03 1.89
1656 2992 2.218603 AGCGGGCTATGGAAAATAACG 58.781 47.619 0.00 0.00 0.00 3.18
1657 2993 1.265905 GCGGGCTATGGAAAATAACGG 59.734 52.381 0.00 0.00 0.00 4.44
1658 2994 1.265905 CGGGCTATGGAAAATAACGGC 59.734 52.381 0.00 0.00 0.00 5.68
1659 2995 1.265905 GGGCTATGGAAAATAACGGCG 59.734 52.381 4.80 4.80 0.00 6.46
1660 2996 1.265905 GGCTATGGAAAATAACGGCGG 59.734 52.381 13.24 0.00 0.00 6.13
1661 2997 1.265905 GCTATGGAAAATAACGGCGGG 59.734 52.381 13.24 0.00 0.00 6.13
1662 2998 1.265905 CTATGGAAAATAACGGCGGGC 59.734 52.381 13.24 0.00 0.00 6.13
1663 2999 1.388837 ATGGAAAATAACGGCGGGCC 61.389 55.000 13.24 0.00 0.00 5.80
1664 3000 1.751544 GGAAAATAACGGCGGGCCT 60.752 57.895 13.24 0.00 0.00 5.19
1665 3001 1.317431 GGAAAATAACGGCGGGCCTT 61.317 55.000 13.24 0.00 0.00 4.35
1666 3002 0.099968 GAAAATAACGGCGGGCCTTC 59.900 55.000 13.24 3.56 0.00 3.46
1667 3003 0.609681 AAAATAACGGCGGGCCTTCA 60.610 50.000 13.24 0.00 0.00 3.02
1668 3004 0.609681 AAATAACGGCGGGCCTTCAA 60.610 50.000 13.24 0.00 0.00 2.69
1669 3005 0.609681 AATAACGGCGGGCCTTCAAA 60.610 50.000 13.24 0.00 0.00 2.69
1670 3006 0.395173 ATAACGGCGGGCCTTCAAAT 60.395 50.000 13.24 0.00 0.00 2.32
1671 3007 1.027792 TAACGGCGGGCCTTCAAATC 61.028 55.000 13.24 0.00 0.00 2.17
1672 3008 2.749839 CGGCGGGCCTTCAAATCA 60.750 61.111 0.84 0.00 0.00 2.57
1673 3009 2.764314 CGGCGGGCCTTCAAATCAG 61.764 63.158 0.84 0.00 0.00 2.90
1674 3010 1.678970 GGCGGGCCTTCAAATCAGT 60.679 57.895 0.84 0.00 0.00 3.41
1675 3011 1.250840 GGCGGGCCTTCAAATCAGTT 61.251 55.000 0.84 0.00 0.00 3.16
1676 3012 1.459450 GCGGGCCTTCAAATCAGTTA 58.541 50.000 0.84 0.00 0.00 2.24
1677 3013 2.024414 GCGGGCCTTCAAATCAGTTAT 58.976 47.619 0.84 0.00 0.00 1.89
1678 3014 3.211045 GCGGGCCTTCAAATCAGTTATA 58.789 45.455 0.84 0.00 0.00 0.98
1679 3015 3.251004 GCGGGCCTTCAAATCAGTTATAG 59.749 47.826 0.84 0.00 0.00 1.31
1680 3016 3.251004 CGGGCCTTCAAATCAGTTATAGC 59.749 47.826 0.84 0.00 0.00 2.97
1681 3017 3.251004 GGGCCTTCAAATCAGTTATAGCG 59.749 47.826 0.84 0.00 0.00 4.26
1682 3018 3.251004 GGCCTTCAAATCAGTTATAGCGG 59.749 47.826 0.00 0.00 0.00 5.52
1683 3019 4.127171 GCCTTCAAATCAGTTATAGCGGA 58.873 43.478 0.00 0.00 0.00 5.54
1684 3020 4.212214 GCCTTCAAATCAGTTATAGCGGAG 59.788 45.833 0.00 0.00 0.00 4.63
1704 3040 3.900388 GCTATAGCGGTCTATATCGGG 57.100 52.381 9.40 0.00 37.20 5.14
1705 3041 2.030981 GCTATAGCGGTCTATATCGGGC 60.031 54.545 9.40 0.00 37.20 6.13
1706 3042 2.438800 ATAGCGGTCTATATCGGGCT 57.561 50.000 0.00 0.00 33.89 5.19
1707 3043 3.572632 ATAGCGGTCTATATCGGGCTA 57.427 47.619 0.00 0.00 37.39 3.93
1708 3044 2.438800 AGCGGTCTATATCGGGCTAT 57.561 50.000 0.00 0.00 0.00 2.97
1709 3045 2.736347 AGCGGTCTATATCGGGCTATT 58.264 47.619 0.00 0.00 0.00 1.73
1710 3046 3.097614 AGCGGTCTATATCGGGCTATTT 58.902 45.455 0.00 0.00 0.00 1.40
1711 3047 4.275810 AGCGGTCTATATCGGGCTATTTA 58.724 43.478 0.00 0.00 0.00 1.40
1712 3048 4.894114 AGCGGTCTATATCGGGCTATTTAT 59.106 41.667 0.00 0.00 0.00 1.40
1713 3049 4.982916 GCGGTCTATATCGGGCTATTTATG 59.017 45.833 0.00 0.00 0.00 1.90
1714 3050 5.221185 GCGGTCTATATCGGGCTATTTATGA 60.221 44.000 0.00 0.00 0.00 2.15
1715 3051 6.682113 GCGGTCTATATCGGGCTATTTATGAA 60.682 42.308 0.00 0.00 0.00 2.57
1716 3052 6.918569 CGGTCTATATCGGGCTATTTATGAAG 59.081 42.308 0.00 0.00 0.00 3.02
1717 3053 7.210873 GGTCTATATCGGGCTATTTATGAAGG 58.789 42.308 0.00 0.00 0.00 3.46
1718 3054 6.702282 GTCTATATCGGGCTATTTATGAAGGC 59.298 42.308 0.00 0.00 37.55 4.35
1719 3055 3.788227 ATCGGGCTATTTATGAAGGCA 57.212 42.857 0.00 0.00 39.91 4.75
1720 3056 3.569194 TCGGGCTATTTATGAAGGCAA 57.431 42.857 0.00 0.00 39.91 4.52
1721 3057 3.211045 TCGGGCTATTTATGAAGGCAAC 58.789 45.455 0.00 0.00 39.91 4.17
1722 3058 2.293399 CGGGCTATTTATGAAGGCAACC 59.707 50.000 0.00 0.00 39.91 3.77
1723 3059 3.295973 GGGCTATTTATGAAGGCAACCA 58.704 45.455 0.00 0.00 39.91 3.67
1724 3060 3.897505 GGGCTATTTATGAAGGCAACCAT 59.102 43.478 0.00 0.00 39.91 3.55
1725 3061 4.344968 GGGCTATTTATGAAGGCAACCATT 59.655 41.667 0.00 0.00 39.91 3.16
1726 3062 5.163311 GGGCTATTTATGAAGGCAACCATTT 60.163 40.000 0.00 0.00 39.91 2.32
1727 3063 6.041523 GGGCTATTTATGAAGGCAACCATTTA 59.958 38.462 0.00 0.00 39.91 1.40
1728 3064 7.147976 GGCTATTTATGAAGGCAACCATTTAG 58.852 38.462 0.00 0.00 38.14 1.85
1729 3065 6.642540 GCTATTTATGAAGGCAACCATTTAGC 59.357 38.462 0.00 0.00 37.17 3.09
1730 3066 4.630894 TTATGAAGGCAACCATTTAGCG 57.369 40.909 0.00 0.00 37.17 4.26
1731 3067 2.192664 TGAAGGCAACCATTTAGCGA 57.807 45.000 0.00 0.00 37.17 4.93
1732 3068 1.810151 TGAAGGCAACCATTTAGCGAC 59.190 47.619 0.00 0.00 37.17 5.19
1733 3069 1.810151 GAAGGCAACCATTTAGCGACA 59.190 47.619 0.00 0.00 37.17 4.35
1734 3070 1.165270 AGGCAACCATTTAGCGACAC 58.835 50.000 0.00 0.00 37.17 3.67
1735 3071 0.170339 GGCAACCATTTAGCGACACC 59.830 55.000 0.00 0.00 0.00 4.16
1736 3072 0.170339 GCAACCATTTAGCGACACCC 59.830 55.000 0.00 0.00 0.00 4.61
1737 3073 1.821216 CAACCATTTAGCGACACCCT 58.179 50.000 0.00 0.00 0.00 4.34
1738 3074 1.468520 CAACCATTTAGCGACACCCTG 59.531 52.381 0.00 0.00 0.00 4.45
1739 3075 0.676782 ACCATTTAGCGACACCCTGC 60.677 55.000 0.00 0.00 0.00 4.85
1740 3076 1.376609 CCATTTAGCGACACCCTGCC 61.377 60.000 0.00 0.00 0.00 4.85
1741 3077 1.449601 ATTTAGCGACACCCTGCCG 60.450 57.895 0.00 0.00 0.00 5.69
1742 3078 1.895020 ATTTAGCGACACCCTGCCGA 61.895 55.000 0.00 0.00 0.00 5.54
1743 3079 2.102109 TTTAGCGACACCCTGCCGAA 62.102 55.000 0.00 0.00 0.00 4.30
1744 3080 2.102109 TTAGCGACACCCTGCCGAAA 62.102 55.000 0.00 0.00 0.00 3.46
1745 3081 2.102109 TAGCGACACCCTGCCGAAAA 62.102 55.000 0.00 0.00 0.00 2.29
1746 3082 2.966309 GCGACACCCTGCCGAAAAG 61.966 63.158 0.00 0.00 0.00 2.27
1747 3083 2.325082 CGACACCCTGCCGAAAAGG 61.325 63.158 0.00 0.00 44.97 3.11
1756 3092 4.218722 CCGAAAAGGCCATAGCGT 57.781 55.556 5.01 0.00 41.24 5.07
1757 3093 1.721487 CCGAAAAGGCCATAGCGTG 59.279 57.895 5.01 0.00 41.24 5.34
1758 3094 1.062525 CGAAAAGGCCATAGCGTGC 59.937 57.895 5.01 0.00 41.24 5.34
1759 3095 1.369091 CGAAAAGGCCATAGCGTGCT 61.369 55.000 5.01 0.00 41.24 4.40
1760 3096 1.663695 GAAAAGGCCATAGCGTGCTA 58.336 50.000 5.01 3.73 41.24 3.49
1761 3097 2.222027 GAAAAGGCCATAGCGTGCTAT 58.778 47.619 5.01 8.54 41.24 2.97
1762 3098 3.399330 GAAAAGGCCATAGCGTGCTATA 58.601 45.455 13.65 0.00 41.24 1.31
1763 3099 2.751166 AAGGCCATAGCGTGCTATAG 57.249 50.000 13.65 8.33 41.24 1.31
1764 3100 0.247736 AGGCCATAGCGTGCTATAGC 59.752 55.000 19.64 19.64 40.96 2.97
1765 3101 1.078759 GGCCATAGCGTGCTATAGCG 61.079 60.000 20.58 7.69 42.02 4.26
1766 3102 1.078759 GCCATAGCGTGCTATAGCGG 61.079 60.000 19.55 14.62 45.83 5.52
1767 3103 0.526211 CCATAGCGTGCTATAGCGGA 59.474 55.000 19.55 0.03 45.83 5.54
1768 3104 1.468224 CCATAGCGTGCTATAGCGGAG 60.468 57.143 19.55 13.65 45.83 4.63
1769 3105 0.171455 ATAGCGTGCTATAGCGGAGC 59.829 55.000 22.98 22.98 45.83 4.70
1784 3120 3.314541 CGGAGCTATAGCCGGTTATTT 57.685 47.619 21.17 2.97 43.67 1.40
1785 3121 4.445452 CGGAGCTATAGCCGGTTATTTA 57.555 45.455 21.17 0.00 43.67 1.40
1786 3122 4.813027 CGGAGCTATAGCCGGTTATTTAA 58.187 43.478 21.17 0.00 43.67 1.52
1787 3123 5.232463 CGGAGCTATAGCCGGTTATTTAAA 58.768 41.667 21.17 0.00 43.67 1.52
1788 3124 5.697633 CGGAGCTATAGCCGGTTATTTAAAA 59.302 40.000 21.17 0.00 43.67 1.52
1789 3125 6.347160 CGGAGCTATAGCCGGTTATTTAAAAC 60.347 42.308 21.17 4.23 43.67 2.43
1790 3126 6.709397 GGAGCTATAGCCGGTTATTTAAAACT 59.291 38.462 21.17 5.35 43.38 2.66
1791 3127 7.874528 GGAGCTATAGCCGGTTATTTAAAACTA 59.125 37.037 21.17 0.00 43.38 2.24
1792 3128 9.433153 GAGCTATAGCCGGTTATTTAAAACTAT 57.567 33.333 21.17 6.18 43.38 2.12
1793 3129 9.216117 AGCTATAGCCGGTTATTTAAAACTATG 57.784 33.333 21.17 1.22 43.38 2.23
1794 3130 8.448615 GCTATAGCCGGTTATTTAAAACTATGG 58.551 37.037 16.53 6.75 34.31 2.74
1795 3131 9.498176 CTATAGCCGGTTATTTAAAACTATGGT 57.502 33.333 16.53 0.00 0.00 3.55
1796 3132 8.756486 ATAGCCGGTTATTTAAAACTATGGTT 57.244 30.769 4.77 0.00 37.24 3.67
1797 3133 9.850198 ATAGCCGGTTATTTAAAACTATGGTTA 57.150 29.630 4.77 0.00 34.90 2.85
1798 3134 8.578448 AGCCGGTTATTTAAAACTATGGTTAA 57.422 30.769 1.90 0.00 34.90 2.01
1799 3135 9.022884 AGCCGGTTATTTAAAACTATGGTTAAA 57.977 29.630 1.90 0.00 34.90 1.52
1800 3136 9.806203 GCCGGTTATTTAAAACTATGGTTAAAT 57.194 29.630 1.90 7.55 40.93 1.40
1880 3217 2.778659 GCAACATCAACTCGATCTTGC 58.221 47.619 0.40 0.40 45.05 4.01
1916 3257 8.407064 AGAGTTTGGAGTATCTATCGTTAACTG 58.593 37.037 3.71 0.00 33.73 3.16
1918 3259 9.182214 AGTTTGGAGTATCTATCGTTAACTGTA 57.818 33.333 3.71 0.00 33.73 2.74
1926 3267 1.912001 TCGTTAACTGTATTCCCGCG 58.088 50.000 0.00 0.00 0.00 6.46
1953 3294 5.723672 ACGACAGAGGATAGAAGAAACAA 57.276 39.130 0.00 0.00 0.00 2.83
1956 3297 4.822026 ACAGAGGATAGAAGAAACAACCG 58.178 43.478 0.00 0.00 0.00 4.44
1969 3310 0.468226 ACAACCGAACTGGAGAGCAA 59.532 50.000 0.00 0.00 42.00 3.91
1973 3314 2.427506 ACCGAACTGGAGAGCAAATTC 58.572 47.619 0.00 0.00 42.00 2.17
1977 3318 4.695455 CCGAACTGGAGAGCAAATTCTAAA 59.305 41.667 0.00 0.00 42.00 1.85
1988 3329 9.107177 GAGAGCAAATTCTAAAGATTGAGATCA 57.893 33.333 0.00 0.00 34.60 2.92
1992 3333 9.719279 GCAAATTCTAAAGATTGAGATCAAGAG 57.281 33.333 1.32 0.00 39.47 2.85
1996 3337 6.882656 TCTAAAGATTGAGATCAAGAGGTGG 58.117 40.000 1.32 0.00 39.47 4.61
1997 3338 5.511386 AAAGATTGAGATCAAGAGGTGGT 57.489 39.130 1.32 0.00 39.47 4.16
1998 3339 4.484537 AGATTGAGATCAAGAGGTGGTG 57.515 45.455 1.32 0.00 39.47 4.17
2000 3341 3.685139 TTGAGATCAAGAGGTGGTGAC 57.315 47.619 0.00 0.00 0.00 3.67
2001 3342 1.546029 TGAGATCAAGAGGTGGTGACG 59.454 52.381 0.00 0.00 0.00 4.35
2002 3343 1.546476 GAGATCAAGAGGTGGTGACGT 59.454 52.381 0.00 0.00 0.00 4.34
2003 3344 2.753452 GAGATCAAGAGGTGGTGACGTA 59.247 50.000 0.00 0.00 0.00 3.57
2004 3345 3.366396 AGATCAAGAGGTGGTGACGTAT 58.634 45.455 0.00 0.00 0.00 3.06
2005 3346 3.131223 AGATCAAGAGGTGGTGACGTATG 59.869 47.826 0.00 0.00 0.00 2.39
2006 3347 1.548719 TCAAGAGGTGGTGACGTATGG 59.451 52.381 0.00 0.00 0.00 2.74
2009 3350 0.179108 GAGGTGGTGACGTATGGCTC 60.179 60.000 0.00 0.00 0.00 4.70
2010 3351 0.902984 AGGTGGTGACGTATGGCTCA 60.903 55.000 0.00 0.00 0.00 4.26
2011 3352 0.460284 GGTGGTGACGTATGGCTCAG 60.460 60.000 0.00 0.00 0.00 3.35
2012 3353 0.246635 GTGGTGACGTATGGCTCAGT 59.753 55.000 0.00 0.00 0.00 3.41
2013 3354 1.475280 GTGGTGACGTATGGCTCAGTA 59.525 52.381 0.00 0.00 0.00 2.74
2014 3355 1.475280 TGGTGACGTATGGCTCAGTAC 59.525 52.381 0.00 0.00 0.00 2.73
2015 3356 1.749634 GGTGACGTATGGCTCAGTACT 59.250 52.381 0.00 0.00 0.00 2.73
2018 3359 4.037684 GGTGACGTATGGCTCAGTACTATT 59.962 45.833 0.00 0.00 0.00 1.73
2019 3360 4.976731 GTGACGTATGGCTCAGTACTATTG 59.023 45.833 0.00 0.00 0.00 1.90
2020 3361 4.037565 TGACGTATGGCTCAGTACTATTGG 59.962 45.833 0.00 0.00 0.00 3.16
2021 3362 4.212716 ACGTATGGCTCAGTACTATTGGA 58.787 43.478 0.00 0.00 0.00 3.53
2023 3364 4.037565 CGTATGGCTCAGTACTATTGGACA 59.962 45.833 0.00 0.00 0.00 4.02
2024 3365 3.887621 TGGCTCAGTACTATTGGACAC 57.112 47.619 0.00 0.00 0.00 3.67
2025 3366 3.441101 TGGCTCAGTACTATTGGACACT 58.559 45.455 0.00 0.00 0.00 3.55
2038 3754 4.640690 ACACTGCCGGGACCTCCT 62.641 66.667 2.18 0.00 35.95 3.69
2039 3755 4.087892 CACTGCCGGGACCTCCTG 62.088 72.222 2.18 0.00 42.13 3.86
2042 3758 3.003173 TGCCGGGACCTCCTGAAG 61.003 66.667 2.18 0.00 45.36 3.02
2043 3759 4.475135 GCCGGGACCTCCTGAAGC 62.475 72.222 2.18 0.00 45.36 3.86
2054 3770 0.823356 TCCTGAAGCACTTTGGGCAC 60.823 55.000 0.00 0.00 0.00 5.01
2071 3879 1.928595 GCACCGTCCAAACAATTTCGG 60.929 52.381 0.00 0.00 42.94 4.30
2084 3892 2.939103 CAATTTCGGATCCCACTCTCAC 59.061 50.000 6.06 0.00 0.00 3.51
2085 3893 1.639722 TTTCGGATCCCACTCTCACA 58.360 50.000 6.06 0.00 0.00 3.58
2087 3895 1.403814 TCGGATCCCACTCTCACATC 58.596 55.000 6.06 0.00 0.00 3.06
2090 3898 1.691434 GGATCCCACTCTCACATCCTC 59.309 57.143 0.00 0.00 31.78 3.71
2184 4006 9.712305 CTCCTGTCAATAATTATTAACGGATCT 57.288 33.333 18.42 0.00 0.00 2.75
2185 4007 9.489084 TCCTGTCAATAATTATTAACGGATCTG 57.511 33.333 18.42 0.00 0.00 2.90
2186 4008 8.230486 CCTGTCAATAATTATTAACGGATCTGC 58.770 37.037 18.42 0.41 0.00 4.26
2187 4009 8.669946 TGTCAATAATTATTAACGGATCTGCA 57.330 30.769 10.34 0.00 0.00 4.41
2188 4010 8.556194 TGTCAATAATTATTAACGGATCTGCAC 58.444 33.333 10.34 0.00 0.00 4.57
2189 4011 8.556194 GTCAATAATTATTAACGGATCTGCACA 58.444 33.333 10.34 0.00 0.00 4.57
2190 4012 8.556194 TCAATAATTATTAACGGATCTGCACAC 58.444 33.333 10.34 0.00 0.00 3.82
2191 4013 5.751243 AATTATTAACGGATCTGCACACC 57.249 39.130 0.00 0.00 0.00 4.16
2197 4019 1.490490 ACGGATCTGCACACCCATAAT 59.510 47.619 0.00 0.00 0.00 1.28
2202 4024 5.106555 CGGATCTGCACACCCATAATAATTC 60.107 44.000 0.00 0.00 0.00 2.17
2209 4031 5.007034 CACACCCATAATAATTCCCGCATA 58.993 41.667 0.00 0.00 0.00 3.14
2213 4035 5.013547 CCCATAATAATTCCCGCATACCAA 58.986 41.667 0.00 0.00 0.00 3.67
2219 4041 4.450082 AATTCCCGCATACCAAAAAGAC 57.550 40.909 0.00 0.00 0.00 3.01
2220 4042 2.570415 TCCCGCATACCAAAAAGACA 57.430 45.000 0.00 0.00 0.00 3.41
2229 4051 6.692681 CGCATACCAAAAAGACATTTATCCAG 59.307 38.462 0.00 0.00 0.00 3.86
2232 4054 4.764823 ACCAAAAAGACATTTATCCAGCGA 59.235 37.500 0.00 0.00 0.00 4.93
2240 4062 3.941483 ACATTTATCCAGCGAACCTTCTG 59.059 43.478 0.00 0.00 0.00 3.02
2256 4078 7.437267 CGAACCTTCTGTTATCGTATACCATTT 59.563 37.037 0.00 0.00 37.29 2.32
2272 4094 4.571919 ACCATTTCCTTTGCAACATGATG 58.428 39.130 0.00 0.00 0.00 3.07
2285 4107 4.990426 GCAACATGATGCTTTACAAAACCT 59.010 37.500 19.70 0.00 43.06 3.50
2294 4116 3.317993 GCTTTACAAAACCTGAGGCAAGA 59.682 43.478 0.00 0.00 0.00 3.02
2296 4118 5.509670 GCTTTACAAAACCTGAGGCAAGATT 60.510 40.000 0.00 0.00 0.00 2.40
2301 4123 7.066307 ACAAAACCTGAGGCAAGATTTTATT 57.934 32.000 0.00 0.00 0.00 1.40
2310 4132 7.930217 TGAGGCAAGATTTTATTTTATCCTCG 58.070 34.615 0.00 0.00 39.24 4.63
2318 4140 9.003658 AGATTTTATTTTATCCTCGCGATCAAT 57.996 29.630 10.36 6.25 31.92 2.57
2324 4146 8.955061 ATTTTATCCTCGCGATCAATATTTTG 57.045 30.769 10.36 0.00 31.92 2.44
2390 4212 7.772332 ACTCTTATTCATGTATTCCGTTGTC 57.228 36.000 0.00 0.00 0.00 3.18
2394 4216 1.134640 TCATGTATTCCGTTGTCCCCG 60.135 52.381 0.00 0.00 0.00 5.73
2422 4244 1.668826 ACCTTAGGGCATCTCCAACA 58.331 50.000 2.32 0.00 36.21 3.33
2433 4255 0.761323 TCTCCAACACGGACCCTCAA 60.761 55.000 0.00 0.00 39.64 3.02
2450 4272 5.646360 ACCCTCAAAACGGACATAGTATTTG 59.354 40.000 0.00 0.00 0.00 2.32
2452 4274 6.183360 CCCTCAAAACGGACATAGTATTTGTC 60.183 42.308 0.00 0.00 42.20 3.18
2454 4276 7.201530 CCTCAAAACGGACATAGTATTTGTCTC 60.202 40.741 4.35 0.00 42.48 3.36
2456 4278 8.525316 TCAAAACGGACATAGTATTTGTCTCTA 58.475 33.333 4.35 0.00 42.48 2.43
2517 4371 6.421377 AAAGCAAATTTGAACAAACCAGAC 57.579 33.333 22.31 0.00 32.51 3.51
2526 4380 3.314080 TGAACAAACCAGACGAATTCCAC 59.686 43.478 0.00 0.00 0.00 4.02
2529 4383 0.034896 AACCAGACGAATTCCACGCT 59.965 50.000 0.00 0.00 0.00 5.07
2540 4394 2.010145 TTCCACGCTAAGCAGATGAC 57.990 50.000 0.00 0.00 0.00 3.06
2542 4396 1.134995 TCCACGCTAAGCAGATGACTG 60.135 52.381 0.00 0.00 45.91 3.51
2553 4407 7.148340 GCTAAGCAGATGACTGTCATTTAAACT 60.148 37.037 23.03 12.85 45.04 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 9.949174 GAACAAATTTAAAAATGCTGGACAATT 57.051 25.926 0.00 0.00 0.00 2.32
2 3 9.118300 TGAACAAATTTAAAAATGCTGGACAAT 57.882 25.926 0.00 0.00 0.00 2.71
3 4 8.498054 TGAACAAATTTAAAAATGCTGGACAA 57.502 26.923 0.00 0.00 0.00 3.18
42 43 8.150296 ACCATAAAGGAAATTTTGAAACTCCAG 58.850 33.333 0.00 0.00 41.22 3.86
55 57 7.728148 ACCACGTTAAAAACCATAAAGGAAAT 58.272 30.769 0.00 0.00 41.22 2.17
212 216 8.796475 TGGAAAACAATTTGAAATTCCAAACAA 58.204 25.926 21.56 8.14 42.30 2.83
332 337 8.474006 AATACGCTAATTGTTTTTGAAATCCC 57.526 30.769 0.00 0.00 0.00 3.85
499 506 2.550830 ACACACAGAAGCTTCCGAAT 57.449 45.000 22.81 1.01 0.00 3.34
504 511 6.402658 GCCTCTTATTAACACACAGAAGCTTC 60.403 42.308 19.11 19.11 0.00 3.86
533 541 1.561076 TGCATCATCCACCAGTAGCTT 59.439 47.619 0.00 0.00 0.00 3.74
534 542 1.134280 GTGCATCATCCACCAGTAGCT 60.134 52.381 0.00 0.00 0.00 3.32
535 543 1.303309 GTGCATCATCCACCAGTAGC 58.697 55.000 0.00 0.00 0.00 3.58
536 544 2.696989 TGTGCATCATCCACCAGTAG 57.303 50.000 0.00 0.00 32.30 2.57
537 545 3.181455 GGTATGTGCATCATCCACCAGTA 60.181 47.826 12.54 0.00 36.01 2.74
538 546 2.421952 GGTATGTGCATCATCCACCAGT 60.422 50.000 12.54 0.00 36.01 4.00
539 547 2.158711 AGGTATGTGCATCATCCACCAG 60.159 50.000 16.69 0.00 37.53 4.00
540 548 1.845791 AGGTATGTGCATCATCCACCA 59.154 47.619 16.69 0.00 37.53 4.17
541 549 2.645838 AGGTATGTGCATCATCCACC 57.354 50.000 10.71 10.71 36.13 4.61
542 550 3.059884 CGTAGGTATGTGCATCATCCAC 58.940 50.000 5.25 0.95 37.91 4.02
543 551 2.962421 TCGTAGGTATGTGCATCATCCA 59.038 45.455 5.25 0.00 37.91 3.41
544 552 3.660501 TCGTAGGTATGTGCATCATCC 57.339 47.619 5.25 7.12 37.91 3.51
545 553 5.050490 ACTTTCGTAGGTATGTGCATCATC 58.950 41.667 5.25 0.00 37.91 2.92
546 554 5.023533 ACTTTCGTAGGTATGTGCATCAT 57.976 39.130 0.00 0.00 40.25 2.45
547 555 4.465632 ACTTTCGTAGGTATGTGCATCA 57.534 40.909 0.00 0.00 0.00 3.07
548 556 4.630069 ACAACTTTCGTAGGTATGTGCATC 59.370 41.667 0.00 0.00 0.00 3.91
549 557 4.391830 CACAACTTTCGTAGGTATGTGCAT 59.608 41.667 0.00 0.00 33.42 3.96
550 558 3.743911 CACAACTTTCGTAGGTATGTGCA 59.256 43.478 6.65 0.00 33.42 4.57
551 559 3.991773 TCACAACTTTCGTAGGTATGTGC 59.008 43.478 11.52 0.00 37.17 4.57
552 560 6.533819 TTTCACAACTTTCGTAGGTATGTG 57.466 37.500 10.69 10.69 37.90 3.21
553 561 8.836268 TTATTTCACAACTTTCGTAGGTATGT 57.164 30.769 0.00 0.00 0.00 2.29
557 565 8.680001 ACTTTTTATTTCACAACTTTCGTAGGT 58.320 29.630 0.00 0.00 0.00 3.08
558 566 8.953990 CACTTTTTATTTCACAACTTTCGTAGG 58.046 33.333 0.00 0.00 0.00 3.18
559 567 9.710979 TCACTTTTTATTTCACAACTTTCGTAG 57.289 29.630 0.00 0.00 0.00 3.51
561 569 8.856247 GTTCACTTTTTATTTCACAACTTTCGT 58.144 29.630 0.00 0.00 0.00 3.85
562 570 9.072294 AGTTCACTTTTTATTTCACAACTTTCG 57.928 29.630 0.00 0.00 0.00 3.46
591 599 9.486497 CAAGCAACTACATGATCATAGATAACT 57.514 33.333 8.15 0.00 0.00 2.24
592 600 8.715998 CCAAGCAACTACATGATCATAGATAAC 58.284 37.037 8.15 0.00 0.00 1.89
593 601 8.650490 TCCAAGCAACTACATGATCATAGATAA 58.350 33.333 8.15 0.00 0.00 1.75
594 602 8.193953 TCCAAGCAACTACATGATCATAGATA 57.806 34.615 8.15 0.91 0.00 1.98
595 603 7.071069 TCCAAGCAACTACATGATCATAGAT 57.929 36.000 8.15 0.00 0.00 1.98
596 604 6.484364 TCCAAGCAACTACATGATCATAGA 57.516 37.500 8.15 0.00 0.00 1.98
597 605 6.370994 GGATCCAAGCAACTACATGATCATAG 59.629 42.308 8.15 5.90 0.00 2.23
598 606 6.183361 TGGATCCAAGCAACTACATGATCATA 60.183 38.462 13.46 0.00 0.00 2.15
599 607 5.068636 GGATCCAAGCAACTACATGATCAT 58.931 41.667 6.95 1.18 0.00 2.45
600 608 4.080413 TGGATCCAAGCAACTACATGATCA 60.080 41.667 13.46 0.00 0.00 2.92
601 609 4.454678 TGGATCCAAGCAACTACATGATC 58.545 43.478 13.46 0.00 0.00 2.92
602 610 4.080129 ACTGGATCCAAGCAACTACATGAT 60.080 41.667 17.00 0.00 0.00 2.45
603 611 3.264193 ACTGGATCCAAGCAACTACATGA 59.736 43.478 17.00 0.00 0.00 3.07
604 612 3.376234 CACTGGATCCAAGCAACTACATG 59.624 47.826 17.00 1.63 0.00 3.21
605 613 3.009473 ACACTGGATCCAAGCAACTACAT 59.991 43.478 17.00 0.00 0.00 2.29
606 614 2.371841 ACACTGGATCCAAGCAACTACA 59.628 45.455 17.00 0.00 0.00 2.74
607 615 2.744202 CACACTGGATCCAAGCAACTAC 59.256 50.000 17.00 0.00 0.00 2.73
608 616 2.290260 CCACACTGGATCCAAGCAACTA 60.290 50.000 17.00 0.00 40.96 2.24
609 617 1.546323 CCACACTGGATCCAAGCAACT 60.546 52.381 17.00 0.00 40.96 3.16
610 618 0.883833 CCACACTGGATCCAAGCAAC 59.116 55.000 17.00 0.00 40.96 4.17
611 619 0.251297 CCCACACTGGATCCAAGCAA 60.251 55.000 17.00 0.00 40.96 3.91
612 620 1.379916 CCCACACTGGATCCAAGCA 59.620 57.895 17.00 0.00 40.96 3.91
613 621 0.962356 CACCCACACTGGATCCAAGC 60.962 60.000 17.00 0.00 40.96 4.01
614 622 0.322816 CCACCCACACTGGATCCAAG 60.323 60.000 17.00 13.76 40.96 3.61
615 623 1.767036 CCACCCACACTGGATCCAA 59.233 57.895 17.00 0.00 40.96 3.53
616 624 2.230653 CCCACCCACACTGGATCCA 61.231 63.158 15.27 15.27 40.96 3.41
617 625 2.677228 CCCACCCACACTGGATCC 59.323 66.667 4.20 4.20 40.96 3.36
618 626 2.044946 GCCCACCCACACTGGATC 60.045 66.667 0.00 0.00 40.96 3.36
619 627 3.661648 GGCCCACCCACACTGGAT 61.662 66.667 0.00 0.00 40.96 3.41
620 628 4.918360 AGGCCCACCCACACTGGA 62.918 66.667 0.00 0.00 40.96 3.86
621 629 2.945178 AAAAGGCCCACCCACACTGG 62.945 60.000 0.00 0.00 36.11 4.00
622 630 1.457455 AAAAGGCCCACCCACACTG 60.457 57.895 0.00 0.00 36.11 3.66
623 631 1.152546 GAAAAGGCCCACCCACACT 60.153 57.895 0.00 0.00 36.11 3.55
624 632 0.759060 AAGAAAAGGCCCACCCACAC 60.759 55.000 0.00 0.00 36.11 3.82
625 633 0.469144 GAAGAAAAGGCCCACCCACA 60.469 55.000 0.00 0.00 36.11 4.17
626 634 1.185618 GGAAGAAAAGGCCCACCCAC 61.186 60.000 0.00 0.00 36.11 4.61
627 635 1.155155 GGAAGAAAAGGCCCACCCA 59.845 57.895 0.00 0.00 36.11 4.51
628 636 0.252239 ATGGAAGAAAAGGCCCACCC 60.252 55.000 0.00 0.00 36.11 4.61
629 637 0.897621 CATGGAAGAAAAGGCCCACC 59.102 55.000 0.00 0.00 0.00 4.61
630 638 1.923356 TCATGGAAGAAAAGGCCCAC 58.077 50.000 0.00 0.00 0.00 4.61
631 639 2.042842 TGATCATGGAAGAAAAGGCCCA 59.957 45.455 0.00 0.00 0.00 5.36
632 640 2.428530 GTGATCATGGAAGAAAAGGCCC 59.571 50.000 0.00 0.00 0.00 5.80
633 641 3.091545 TGTGATCATGGAAGAAAAGGCC 58.908 45.455 0.00 0.00 0.00 5.19
634 642 4.996788 ATGTGATCATGGAAGAAAAGGC 57.003 40.909 0.00 0.00 32.51 4.35
665 673 8.181573 GCATGTTTAGATTTGATCTTCGGTAAA 58.818 33.333 0.00 0.00 40.76 2.01
666 674 7.201696 GGCATGTTTAGATTTGATCTTCGGTAA 60.202 37.037 0.00 0.00 40.76 2.85
667 675 6.260050 GGCATGTTTAGATTTGATCTTCGGTA 59.740 38.462 0.00 0.00 40.76 4.02
668 676 5.066505 GGCATGTTTAGATTTGATCTTCGGT 59.933 40.000 0.00 0.00 40.76 4.69
669 677 5.506317 GGGCATGTTTAGATTTGATCTTCGG 60.506 44.000 0.00 0.00 40.76 4.30
670 678 5.514279 GGGCATGTTTAGATTTGATCTTCG 58.486 41.667 0.00 0.00 40.76 3.79
671 679 5.506317 CCGGGCATGTTTAGATTTGATCTTC 60.506 44.000 0.00 0.00 40.76 2.87
672 680 4.339247 CCGGGCATGTTTAGATTTGATCTT 59.661 41.667 0.00 0.00 40.76 2.40
673 681 3.885297 CCGGGCATGTTTAGATTTGATCT 59.115 43.478 0.00 0.00 43.33 2.75
674 682 3.550842 GCCGGGCATGTTTAGATTTGATC 60.551 47.826 15.62 0.00 0.00 2.92
675 683 2.362077 GCCGGGCATGTTTAGATTTGAT 59.638 45.455 15.62 0.00 0.00 2.57
676 684 1.748493 GCCGGGCATGTTTAGATTTGA 59.252 47.619 15.62 0.00 0.00 2.69
677 685 1.750778 AGCCGGGCATGTTTAGATTTG 59.249 47.619 23.09 0.00 0.00 2.32
678 686 2.143876 AGCCGGGCATGTTTAGATTT 57.856 45.000 23.09 0.00 0.00 2.17
679 687 2.024414 GAAGCCGGGCATGTTTAGATT 58.976 47.619 23.09 2.58 0.00 2.40
680 688 1.064758 TGAAGCCGGGCATGTTTAGAT 60.065 47.619 23.09 0.00 0.00 1.98
681 689 0.326595 TGAAGCCGGGCATGTTTAGA 59.673 50.000 23.09 0.00 0.00 2.10
682 690 0.734889 CTGAAGCCGGGCATGTTTAG 59.265 55.000 23.09 9.22 0.00 1.85
683 691 0.037590 ACTGAAGCCGGGCATGTTTA 59.962 50.000 23.09 2.71 0.00 2.01
684 692 1.228552 ACTGAAGCCGGGCATGTTT 60.229 52.632 23.09 6.34 0.00 2.83
685 693 1.973281 CACTGAAGCCGGGCATGTT 60.973 57.895 23.09 6.76 0.00 2.71
686 694 2.202236 ATCACTGAAGCCGGGCATGT 62.202 55.000 23.09 10.82 0.00 3.21
687 695 1.452651 ATCACTGAAGCCGGGCATG 60.453 57.895 23.09 10.94 0.00 4.06
688 696 1.452651 CATCACTGAAGCCGGGCAT 60.453 57.895 23.09 9.75 0.00 4.40
689 697 2.046023 CATCACTGAAGCCGGGCA 60.046 61.111 23.09 0.00 0.00 5.36
690 698 3.512516 GCATCACTGAAGCCGGGC 61.513 66.667 12.11 12.11 0.00 6.13
691 699 1.033746 ATTGCATCACTGAAGCCGGG 61.034 55.000 2.18 0.00 0.00 5.73
692 700 0.813184 AATTGCATCACTGAAGCCGG 59.187 50.000 0.00 0.00 0.00 6.13
693 701 2.642139 AAATTGCATCACTGAAGCCG 57.358 45.000 3.87 0.00 0.00 5.52
694 702 4.309099 TCAAAAATTGCATCACTGAAGCC 58.691 39.130 3.87 0.00 0.00 4.35
695 703 4.143179 GCTCAAAAATTGCATCACTGAAGC 60.143 41.667 0.00 0.00 0.00 3.86
696 704 4.387862 GGCTCAAAAATTGCATCACTGAAG 59.612 41.667 0.00 0.00 0.00 3.02
697 705 4.202233 TGGCTCAAAAATTGCATCACTGAA 60.202 37.500 0.00 0.00 0.00 3.02
698 706 3.321396 TGGCTCAAAAATTGCATCACTGA 59.679 39.130 0.00 0.00 0.00 3.41
699 707 3.655486 TGGCTCAAAAATTGCATCACTG 58.345 40.909 0.00 0.00 0.00 3.66
700 708 4.339872 TTGGCTCAAAAATTGCATCACT 57.660 36.364 0.00 0.00 0.00 3.41
701 709 4.201647 CGATTGGCTCAAAAATTGCATCAC 60.202 41.667 0.00 0.00 0.00 3.06
702 710 3.927758 CGATTGGCTCAAAAATTGCATCA 59.072 39.130 0.00 0.00 0.00 3.07
703 711 3.307782 CCGATTGGCTCAAAAATTGCATC 59.692 43.478 0.00 0.00 0.00 3.91
704 712 3.055963 TCCGATTGGCTCAAAAATTGCAT 60.056 39.130 0.00 0.00 34.14 3.96
705 713 2.298446 TCCGATTGGCTCAAAAATTGCA 59.702 40.909 0.00 0.00 34.14 4.08
706 714 2.958213 TCCGATTGGCTCAAAAATTGC 58.042 42.857 0.00 0.00 34.14 3.56
707 715 4.305769 TGTTCCGATTGGCTCAAAAATTG 58.694 39.130 0.00 0.00 34.14 2.32
708 716 4.599047 TGTTCCGATTGGCTCAAAAATT 57.401 36.364 0.00 0.00 34.14 1.82
709 717 4.599047 TTGTTCCGATTGGCTCAAAAAT 57.401 36.364 0.00 0.00 34.14 1.82
710 718 4.142049 ACTTTGTTCCGATTGGCTCAAAAA 60.142 37.500 16.55 3.29 37.22 1.94
711 719 3.383185 ACTTTGTTCCGATTGGCTCAAAA 59.617 39.130 16.55 6.08 37.22 2.44
712 720 2.955660 ACTTTGTTCCGATTGGCTCAAA 59.044 40.909 15.61 15.61 36.69 2.69
713 721 2.552315 GACTTTGTTCCGATTGGCTCAA 59.448 45.455 0.00 0.00 34.14 3.02
714 722 2.151202 GACTTTGTTCCGATTGGCTCA 58.849 47.619 0.00 0.00 34.14 4.26
715 723 2.151202 TGACTTTGTTCCGATTGGCTC 58.849 47.619 0.00 0.00 34.14 4.70
716 724 2.154462 CTGACTTTGTTCCGATTGGCT 58.846 47.619 0.00 0.00 34.14 4.75
717 725 2.151202 TCTGACTTTGTTCCGATTGGC 58.849 47.619 0.00 0.00 34.14 4.52
718 726 3.815401 AGTTCTGACTTTGTTCCGATTGG 59.185 43.478 0.00 0.00 29.87 3.16
719 727 5.389935 GCTAGTTCTGACTTTGTTCCGATTG 60.390 44.000 0.00 0.00 37.33 2.67
720 728 4.691216 GCTAGTTCTGACTTTGTTCCGATT 59.309 41.667 0.00 0.00 37.33 3.34
721 729 4.021016 AGCTAGTTCTGACTTTGTTCCGAT 60.021 41.667 0.00 0.00 37.33 4.18
722 730 3.321111 AGCTAGTTCTGACTTTGTTCCGA 59.679 43.478 0.00 0.00 37.33 4.55
723 731 3.654414 AGCTAGTTCTGACTTTGTTCCG 58.346 45.455 0.00 0.00 37.33 4.30
724 732 4.930405 GGTAGCTAGTTCTGACTTTGTTCC 59.070 45.833 0.00 0.00 37.33 3.62
725 733 5.539048 TGGTAGCTAGTTCTGACTTTGTTC 58.461 41.667 0.00 0.00 37.33 3.18
726 734 5.511545 CCTGGTAGCTAGTTCTGACTTTGTT 60.512 44.000 0.00 0.00 37.33 2.83
727 735 4.021016 CCTGGTAGCTAGTTCTGACTTTGT 60.021 45.833 0.00 0.00 37.33 2.83
728 736 4.499183 CCTGGTAGCTAGTTCTGACTTTG 58.501 47.826 0.00 0.00 37.33 2.77
729 737 3.055747 GCCTGGTAGCTAGTTCTGACTTT 60.056 47.826 0.00 0.00 37.33 2.66
730 738 2.498078 GCCTGGTAGCTAGTTCTGACTT 59.502 50.000 0.00 0.00 37.33 3.01
731 739 2.104170 GCCTGGTAGCTAGTTCTGACT 58.896 52.381 0.00 0.00 39.97 3.41
732 740 1.137282 GGCCTGGTAGCTAGTTCTGAC 59.863 57.143 0.00 0.00 0.00 3.51
733 741 1.486211 GGCCTGGTAGCTAGTTCTGA 58.514 55.000 0.00 0.00 0.00 3.27
734 742 0.466124 GGGCCTGGTAGCTAGTTCTG 59.534 60.000 0.84 0.00 0.00 3.02
735 743 0.340208 AGGGCCTGGTAGCTAGTTCT 59.660 55.000 4.50 0.00 0.00 3.01
736 744 1.139256 GAAGGGCCTGGTAGCTAGTTC 59.861 57.143 6.92 0.00 0.00 3.01
737 745 1.205055 GAAGGGCCTGGTAGCTAGTT 58.795 55.000 6.92 0.00 0.00 2.24
738 746 1.043673 CGAAGGGCCTGGTAGCTAGT 61.044 60.000 6.92 0.00 0.00 2.57
739 747 1.043673 ACGAAGGGCCTGGTAGCTAG 61.044 60.000 6.92 0.00 0.00 3.42
740 748 1.001248 ACGAAGGGCCTGGTAGCTA 59.999 57.895 6.92 0.00 0.00 3.32
741 749 2.284699 ACGAAGGGCCTGGTAGCT 60.285 61.111 6.92 0.00 0.00 3.32
742 750 2.180159 TTGACGAAGGGCCTGGTAGC 62.180 60.000 6.92 0.00 0.00 3.58
743 751 0.541863 ATTGACGAAGGGCCTGGTAG 59.458 55.000 6.92 0.98 0.00 3.18
744 752 0.539986 GATTGACGAAGGGCCTGGTA 59.460 55.000 6.92 0.00 0.00 3.25
745 753 1.201429 AGATTGACGAAGGGCCTGGT 61.201 55.000 6.92 8.83 0.00 4.00
746 754 0.462759 GAGATTGACGAAGGGCCTGG 60.463 60.000 6.92 4.80 0.00 4.45
747 755 0.250234 TGAGATTGACGAAGGGCCTG 59.750 55.000 6.92 0.00 0.00 4.85
748 756 1.207791 ATGAGATTGACGAAGGGCCT 58.792 50.000 0.00 0.00 0.00 5.19
749 757 2.484889 GTATGAGATTGACGAAGGGCC 58.515 52.381 0.00 0.00 0.00 5.80
750 758 2.128035 CGTATGAGATTGACGAAGGGC 58.872 52.381 0.00 0.00 38.88 5.19
751 759 2.361119 TCCGTATGAGATTGACGAAGGG 59.639 50.000 0.00 0.00 38.88 3.95
752 760 3.372954 GTCCGTATGAGATTGACGAAGG 58.627 50.000 0.00 0.00 38.88 3.46
757 765 1.202371 TGGCGTCCGTATGAGATTGAC 60.202 52.381 0.00 0.00 0.00 3.18
758 766 1.107945 TGGCGTCCGTATGAGATTGA 58.892 50.000 0.00 0.00 0.00 2.57
759 767 1.934589 TTGGCGTCCGTATGAGATTG 58.065 50.000 0.00 0.00 0.00 2.67
773 781 2.677003 AAGTGGCGACGATTTGGCG 61.677 57.895 0.00 0.00 34.17 5.69
774 782 1.154225 CAAGTGGCGACGATTTGGC 60.154 57.895 0.00 0.00 0.00 4.52
782 790 2.743928 CAGAGGGCAAGTGGCGAC 60.744 66.667 0.00 0.00 46.16 5.19
864 872 8.752766 ATGAAGCAATGTCTTGTTAATTCAAG 57.247 30.769 1.36 1.36 44.08 3.02
871 879 6.922957 GGACAAAATGAAGCAATGTCTTGTTA 59.077 34.615 0.00 0.00 40.12 2.41
877 885 4.619973 TGTGGACAAAATGAAGCAATGTC 58.380 39.130 0.00 0.00 39.65 3.06
882 890 3.304592 CGTGATGTGGACAAAATGAAGCA 60.305 43.478 0.00 0.00 0.00 3.91
883 891 3.236816 CGTGATGTGGACAAAATGAAGC 58.763 45.455 0.00 0.00 0.00 3.86
894 902 0.389296 CAAGCCGTACGTGATGTGGA 60.389 55.000 15.21 0.00 0.00 4.02
899 907 0.391130 ATGTGCAAGCCGTACGTGAT 60.391 50.000 15.21 1.28 31.89 3.06
925 933 1.339610 TGGACAAAATGAAGCAACCCG 59.660 47.619 0.00 0.00 0.00 5.28
928 936 5.125100 TCTGATGGACAAAATGAAGCAAC 57.875 39.130 0.00 0.00 0.00 4.17
947 955 2.153645 TGCAATGTACAGGCAGTTCTG 58.846 47.619 18.05 0.00 40.40 3.02
999 1007 2.119495 GAGAGCCCAGGGAAGAACATA 58.881 52.381 10.89 0.00 0.00 2.29
1044 1052 0.943835 TGTCGTCGTCGTACGGAGAA 60.944 55.000 16.52 0.00 42.81 2.87
1075 1083 1.352622 AAGGTCAGGAGCACCACCAA 61.353 55.000 11.47 0.00 35.46 3.67
1089 1097 2.545731 GAGAAGAAGATGGCGAAGGTC 58.454 52.381 0.00 0.00 0.00 3.85
1140 1148 1.758514 GATCACCGAGGCCCAGAGA 60.759 63.158 0.00 0.00 0.00 3.10
1170 1178 2.504244 CAGAACGAGACCGCGACC 60.504 66.667 8.23 0.00 39.95 4.79
1228 1236 2.202324 GCTGACGACGACGACCTC 60.202 66.667 15.32 1.68 42.66 3.85
1279 2613 4.838152 CACGGCGGGGTCAGGATG 62.838 72.222 13.24 0.00 37.54 3.51
1283 2617 4.308458 TTGACACGGCGGGGTCAG 62.308 66.667 25.80 8.08 44.12 3.51
1284 2618 4.308458 CTTGACACGGCGGGGTCA 62.308 66.667 23.95 23.95 41.93 4.02
1292 2626 2.027625 GTCGGAAGCCTTGACACGG 61.028 63.158 0.00 0.00 32.91 4.94
1293 2627 2.372690 CGTCGGAAGCCTTGACACG 61.373 63.158 0.00 0.00 32.91 4.49
1294 2628 0.878961 AACGTCGGAAGCCTTGACAC 60.879 55.000 0.00 0.00 32.91 3.67
1295 2629 0.599204 GAACGTCGGAAGCCTTGACA 60.599 55.000 0.00 0.00 32.91 3.58
1296 2630 1.289800 GGAACGTCGGAAGCCTTGAC 61.290 60.000 0.00 0.00 0.00 3.18
1297 2631 1.005394 GGAACGTCGGAAGCCTTGA 60.005 57.895 0.00 0.00 0.00 3.02
1298 2632 2.033194 GGGAACGTCGGAAGCCTTG 61.033 63.158 0.00 0.00 0.00 3.61
1299 2633 2.346365 GGGAACGTCGGAAGCCTT 59.654 61.111 0.00 0.00 0.00 4.35
1314 2648 2.732619 GCCCTCCCTCTTGTACGGG 61.733 68.421 0.00 0.00 42.05 5.28
1315 2649 2.901042 GCCCTCCCTCTTGTACGG 59.099 66.667 0.00 0.00 0.00 4.02
1316 2650 2.494918 CGCCCTCCCTCTTGTACG 59.505 66.667 0.00 0.00 0.00 3.67
1317 2651 2.901042 CCGCCCTCCCTCTTGTAC 59.099 66.667 0.00 0.00 0.00 2.90
1318 2652 3.081409 GCCGCCCTCCCTCTTGTA 61.081 66.667 0.00 0.00 0.00 2.41
1371 2705 1.645455 CAGGCATATGACGCACTGC 59.355 57.895 6.97 0.00 0.00 4.40
1372 2706 1.162181 CCCAGGCATATGACGCACTG 61.162 60.000 6.97 5.95 0.00 3.66
1373 2707 1.146930 CCCAGGCATATGACGCACT 59.853 57.895 6.97 0.00 0.00 4.40
1374 2708 1.893808 CCCCAGGCATATGACGCAC 60.894 63.158 6.97 0.00 0.00 5.34
1375 2709 2.510411 CCCCAGGCATATGACGCA 59.490 61.111 6.97 0.00 0.00 5.24
1428 2762 0.248621 GGAACATATGCTTGCACGCC 60.249 55.000 13.19 0.00 0.00 5.68
1509 2843 1.583967 GACGGTGAGCTCGATGACG 60.584 63.158 9.64 10.99 41.26 4.35
1513 2847 3.518998 CCCGACGGTGAGCTCGAT 61.519 66.667 13.94 0.00 31.24 3.59
1532 2866 2.430610 GGAGGCGGCTCAGATGACT 61.431 63.158 36.07 0.58 0.00 3.41
1539 2873 4.697756 CAAACGGGAGGCGGCTCA 62.698 66.667 36.07 0.00 0.00 4.26
1558 2892 4.896829 TTCGGGCCGGCCAACAAA 62.897 61.111 44.46 28.43 37.98 2.83
1583 2919 4.242475 CGCACTAGTTCTTGTATGAACCA 58.758 43.478 0.00 0.00 45.25 3.67
1589 2925 6.327934 ACGATTTACGCACTAGTTCTTGTAT 58.672 36.000 0.00 0.00 46.94 2.29
1594 2930 5.557891 ACTACGATTTACGCACTAGTTCT 57.442 39.130 0.00 0.00 46.94 3.01
1600 2936 5.349270 TGCATTTAACTACGATTTACGCACT 59.651 36.000 0.00 0.00 46.94 4.40
1623 2959 5.920273 CCATAGCCCGCTATTTAAAACATTG 59.080 40.000 6.48 0.00 37.16 2.82
1625 2961 5.381757 TCCATAGCCCGCTATTTAAAACAT 58.618 37.500 6.48 0.00 37.16 2.71
1627 2963 5.761165 TTCCATAGCCCGCTATTTAAAAC 57.239 39.130 6.48 0.00 37.16 2.43
1628 2964 6.777213 TTTTCCATAGCCCGCTATTTAAAA 57.223 33.333 6.48 12.19 37.16 1.52
1629 2965 6.969993 ATTTTCCATAGCCCGCTATTTAAA 57.030 33.333 6.48 7.56 37.16 1.52
1630 2966 7.308109 CGTTATTTTCCATAGCCCGCTATTTAA 60.308 37.037 6.48 2.15 37.16 1.52
1631 2967 6.148150 CGTTATTTTCCATAGCCCGCTATTTA 59.852 38.462 6.48 0.00 37.16 1.40
1632 2968 5.048991 CGTTATTTTCCATAGCCCGCTATTT 60.049 40.000 6.48 0.00 37.16 1.40
1633 2969 4.454504 CGTTATTTTCCATAGCCCGCTATT 59.545 41.667 6.48 0.00 37.16 1.73
1634 2970 4.000988 CGTTATTTTCCATAGCCCGCTAT 58.999 43.478 3.31 3.31 39.60 2.97
1635 2971 3.395639 CGTTATTTTCCATAGCCCGCTA 58.604 45.455 0.00 0.00 0.00 4.26
1636 2972 2.218603 CGTTATTTTCCATAGCCCGCT 58.781 47.619 0.00 0.00 0.00 5.52
1637 2973 1.265905 CCGTTATTTTCCATAGCCCGC 59.734 52.381 0.00 0.00 0.00 6.13
1638 2974 1.265905 GCCGTTATTTTCCATAGCCCG 59.734 52.381 0.00 0.00 0.00 6.13
1639 2975 1.265905 CGCCGTTATTTTCCATAGCCC 59.734 52.381 0.00 0.00 0.00 5.19
1640 2976 1.265905 CCGCCGTTATTTTCCATAGCC 59.734 52.381 0.00 0.00 0.00 3.93
1641 2977 1.265905 CCCGCCGTTATTTTCCATAGC 59.734 52.381 0.00 0.00 0.00 2.97
1642 2978 1.265905 GCCCGCCGTTATTTTCCATAG 59.734 52.381 0.00 0.00 0.00 2.23
1643 2979 1.310904 GCCCGCCGTTATTTTCCATA 58.689 50.000 0.00 0.00 0.00 2.74
1644 2980 1.388837 GGCCCGCCGTTATTTTCCAT 61.389 55.000 0.00 0.00 0.00 3.41
1645 2981 2.047443 GGCCCGCCGTTATTTTCCA 61.047 57.895 0.00 0.00 0.00 3.53
1646 2982 1.317431 AAGGCCCGCCGTTATTTTCC 61.317 55.000 0.00 0.00 41.95 3.13
1647 2983 0.099968 GAAGGCCCGCCGTTATTTTC 59.900 55.000 0.00 0.00 41.95 2.29
1648 2984 0.609681 TGAAGGCCCGCCGTTATTTT 60.610 50.000 0.00 0.00 41.95 1.82
1649 2985 0.609681 TTGAAGGCCCGCCGTTATTT 60.610 50.000 0.00 0.00 41.95 1.40
1650 2986 0.609681 TTTGAAGGCCCGCCGTTATT 60.610 50.000 0.00 0.00 41.95 1.40
1651 2987 0.395173 ATTTGAAGGCCCGCCGTTAT 60.395 50.000 0.00 0.00 41.95 1.89
1652 2988 1.001887 ATTTGAAGGCCCGCCGTTA 60.002 52.632 0.00 0.00 41.95 3.18
1653 2989 2.282887 ATTTGAAGGCCCGCCGTT 60.283 55.556 0.00 0.00 41.95 4.44
1654 2990 2.750237 GATTTGAAGGCCCGCCGT 60.750 61.111 0.00 0.00 41.95 5.68
1655 2991 2.749839 TGATTTGAAGGCCCGCCG 60.750 61.111 0.00 0.00 41.95 6.46
1656 2992 1.250840 AACTGATTTGAAGGCCCGCC 61.251 55.000 0.00 0.00 0.00 6.13
1657 2993 1.459450 TAACTGATTTGAAGGCCCGC 58.541 50.000 0.00 0.00 0.00 6.13
1658 2994 3.251004 GCTATAACTGATTTGAAGGCCCG 59.749 47.826 0.00 0.00 0.00 6.13
1659 2995 3.251004 CGCTATAACTGATTTGAAGGCCC 59.749 47.826 0.00 0.00 0.00 5.80
1660 2996 3.251004 CCGCTATAACTGATTTGAAGGCC 59.749 47.826 0.00 0.00 0.00 5.19
1661 2997 4.127171 TCCGCTATAACTGATTTGAAGGC 58.873 43.478 0.00 0.00 0.00 4.35
1662 2998 4.212214 GCTCCGCTATAACTGATTTGAAGG 59.788 45.833 0.00 0.00 0.00 3.46
1663 2999 5.053145 AGCTCCGCTATAACTGATTTGAAG 58.947 41.667 0.00 0.00 36.99 3.02
1664 3000 5.023533 AGCTCCGCTATAACTGATTTGAA 57.976 39.130 0.00 0.00 36.99 2.69
1665 3001 4.672587 AGCTCCGCTATAACTGATTTGA 57.327 40.909 0.00 0.00 36.99 2.69
1677 3013 0.036448 AGACCGCTATAGCTCCGCTA 59.964 55.000 21.98 0.00 45.55 4.26
1678 3014 0.036448 TAGACCGCTATAGCTCCGCT 59.964 55.000 21.98 15.04 43.41 5.52
1679 3015 1.096416 ATAGACCGCTATAGCTCCGC 58.904 55.000 21.98 9.00 35.58 5.54
1680 3016 3.184783 CGATATAGACCGCTATAGCTCCG 59.815 52.174 21.98 11.66 41.55 4.63
1681 3017 3.499157 CCGATATAGACCGCTATAGCTCC 59.501 52.174 21.98 10.76 41.55 4.70
1682 3018 3.499157 CCCGATATAGACCGCTATAGCTC 59.501 52.174 21.98 13.70 41.55 4.09
1683 3019 3.478509 CCCGATATAGACCGCTATAGCT 58.521 50.000 21.98 4.58 41.55 3.32
1684 3020 2.030981 GCCCGATATAGACCGCTATAGC 60.031 54.545 15.09 15.09 41.54 2.97
1685 3021 3.478509 AGCCCGATATAGACCGCTATAG 58.521 50.000 0.00 0.00 41.54 1.31
1686 3022 3.572632 AGCCCGATATAGACCGCTATA 57.427 47.619 0.00 0.00 42.22 1.31
1687 3023 2.438800 AGCCCGATATAGACCGCTAT 57.561 50.000 0.00 0.00 40.38 2.97
1688 3024 3.572632 ATAGCCCGATATAGACCGCTA 57.427 47.619 0.00 0.00 33.68 4.26
1689 3025 2.438800 ATAGCCCGATATAGACCGCT 57.561 50.000 0.00 0.00 0.00 5.52
1690 3026 3.521947 AAATAGCCCGATATAGACCGC 57.478 47.619 0.00 0.00 0.00 5.68
1691 3027 6.387041 TCATAAATAGCCCGATATAGACCG 57.613 41.667 0.00 0.00 0.00 4.79
1692 3028 7.210873 CCTTCATAAATAGCCCGATATAGACC 58.789 42.308 0.00 0.00 0.00 3.85
1693 3029 6.702282 GCCTTCATAAATAGCCCGATATAGAC 59.298 42.308 0.00 0.00 0.00 2.59
1694 3030 6.382859 TGCCTTCATAAATAGCCCGATATAGA 59.617 38.462 0.00 0.00 0.00 1.98
1695 3031 6.582636 TGCCTTCATAAATAGCCCGATATAG 58.417 40.000 0.00 0.00 0.00 1.31
1696 3032 6.553953 TGCCTTCATAAATAGCCCGATATA 57.446 37.500 0.00 0.00 0.00 0.86
1697 3033 5.435686 TGCCTTCATAAATAGCCCGATAT 57.564 39.130 0.00 0.00 0.00 1.63
1698 3034 4.901197 TGCCTTCATAAATAGCCCGATA 57.099 40.909 0.00 0.00 0.00 2.92
1699 3035 3.788227 TGCCTTCATAAATAGCCCGAT 57.212 42.857 0.00 0.00 0.00 4.18
1700 3036 3.211045 GTTGCCTTCATAAATAGCCCGA 58.789 45.455 0.00 0.00 0.00 5.14
1701 3037 2.293399 GGTTGCCTTCATAAATAGCCCG 59.707 50.000 0.00 0.00 0.00 6.13
1702 3038 3.295973 TGGTTGCCTTCATAAATAGCCC 58.704 45.455 0.00 0.00 0.00 5.19
1703 3039 5.535753 AATGGTTGCCTTCATAAATAGCC 57.464 39.130 0.00 0.00 0.00 3.93
1704 3040 6.642540 GCTAAATGGTTGCCTTCATAAATAGC 59.357 38.462 0.00 0.00 0.00 2.97
1705 3041 6.857964 CGCTAAATGGTTGCCTTCATAAATAG 59.142 38.462 0.00 0.00 0.00 1.73
1706 3042 6.544197 TCGCTAAATGGTTGCCTTCATAAATA 59.456 34.615 0.00 0.00 0.00 1.40
1707 3043 5.359576 TCGCTAAATGGTTGCCTTCATAAAT 59.640 36.000 0.00 0.00 0.00 1.40
1708 3044 4.702612 TCGCTAAATGGTTGCCTTCATAAA 59.297 37.500 0.00 0.00 0.00 1.40
1709 3045 4.095782 GTCGCTAAATGGTTGCCTTCATAA 59.904 41.667 0.00 0.00 0.00 1.90
1710 3046 3.625764 GTCGCTAAATGGTTGCCTTCATA 59.374 43.478 0.00 0.00 0.00 2.15
1711 3047 2.423538 GTCGCTAAATGGTTGCCTTCAT 59.576 45.455 0.00 0.00 0.00 2.57
1712 3048 1.810151 GTCGCTAAATGGTTGCCTTCA 59.190 47.619 0.00 0.00 0.00 3.02
1713 3049 1.810151 TGTCGCTAAATGGTTGCCTTC 59.190 47.619 0.00 0.00 0.00 3.46
1714 3050 1.539827 GTGTCGCTAAATGGTTGCCTT 59.460 47.619 0.00 0.00 0.00 4.35
1715 3051 1.165270 GTGTCGCTAAATGGTTGCCT 58.835 50.000 0.00 0.00 0.00 4.75
1716 3052 0.170339 GGTGTCGCTAAATGGTTGCC 59.830 55.000 0.00 0.00 0.00 4.52
1717 3053 0.170339 GGGTGTCGCTAAATGGTTGC 59.830 55.000 0.00 0.00 0.00 4.17
1718 3054 1.468520 CAGGGTGTCGCTAAATGGTTG 59.531 52.381 0.00 0.00 0.00 3.77
1719 3055 1.821216 CAGGGTGTCGCTAAATGGTT 58.179 50.000 0.00 0.00 0.00 3.67
1720 3056 0.676782 GCAGGGTGTCGCTAAATGGT 60.677 55.000 0.00 0.00 0.00 3.55
1721 3057 1.376609 GGCAGGGTGTCGCTAAATGG 61.377 60.000 0.00 0.00 0.00 3.16
1722 3058 1.705337 CGGCAGGGTGTCGCTAAATG 61.705 60.000 0.00 0.00 39.15 2.32
1723 3059 1.449601 CGGCAGGGTGTCGCTAAAT 60.450 57.895 0.00 0.00 39.15 1.40
1724 3060 2.047655 CGGCAGGGTGTCGCTAAA 60.048 61.111 0.00 0.00 39.15 1.85
1725 3061 2.102109 TTTCGGCAGGGTGTCGCTAA 62.102 55.000 0.00 0.00 46.34 3.09
1726 3062 2.102109 TTTTCGGCAGGGTGTCGCTA 62.102 55.000 0.00 0.00 46.34 4.26
1727 3063 3.469863 TTTTCGGCAGGGTGTCGCT 62.470 57.895 0.00 0.00 46.34 4.93
1728 3064 2.966309 CTTTTCGGCAGGGTGTCGC 61.966 63.158 0.00 0.00 46.34 5.19
1730 3066 3.668386 CCTTTTCGGCAGGGTGTC 58.332 61.111 0.00 0.00 0.00 3.67
1739 3075 1.721487 CACGCTATGGCCTTTTCGG 59.279 57.895 3.32 0.00 34.44 4.30
1740 3076 1.062525 GCACGCTATGGCCTTTTCG 59.937 57.895 3.32 7.46 34.44 3.46
1741 3077 1.663695 TAGCACGCTATGGCCTTTTC 58.336 50.000 3.32 0.00 34.44 2.29
1742 3078 2.348411 ATAGCACGCTATGGCCTTTT 57.652 45.000 10.71 0.00 37.80 2.27
1743 3079 3.045601 CTATAGCACGCTATGGCCTTT 57.954 47.619 19.48 0.00 39.36 3.11
1744 3080 2.751166 CTATAGCACGCTATGGCCTT 57.249 50.000 19.48 0.00 39.36 4.35
1748 3084 0.526211 TCCGCTATAGCACGCTATGG 59.474 55.000 23.99 17.58 42.21 2.74
1749 3085 1.901538 CTCCGCTATAGCACGCTATG 58.098 55.000 23.99 11.41 42.21 2.23
1750 3086 0.171455 GCTCCGCTATAGCACGCTAT 59.829 55.000 23.99 15.45 42.21 2.97
1751 3087 0.889638 AGCTCCGCTATAGCACGCTA 60.890 55.000 23.99 0.39 42.62 4.26
1752 3088 0.889638 TAGCTCCGCTATAGCACGCT 60.890 55.000 25.78 25.78 42.62 5.07
1753 3089 1.579932 TAGCTCCGCTATAGCACGC 59.420 57.895 23.99 20.26 42.62 5.34
1761 3097 0.538977 AACCGGCTATAGCTCCGCTA 60.539 55.000 23.53 0.00 45.55 4.26
1762 3098 0.538977 TAACCGGCTATAGCTCCGCT 60.539 55.000 23.53 11.63 44.01 5.52
1763 3099 0.531200 ATAACCGGCTATAGCTCCGC 59.469 55.000 23.53 6.66 44.01 5.54
1764 3100 3.314541 AAATAACCGGCTATAGCTCCG 57.685 47.619 23.53 18.50 44.89 4.63
1765 3101 6.709397 AGTTTTAAATAACCGGCTATAGCTCC 59.291 38.462 23.53 7.74 41.70 4.70
1766 3102 7.725818 AGTTTTAAATAACCGGCTATAGCTC 57.274 36.000 23.53 12.96 41.70 4.09
1767 3103 9.216117 CATAGTTTTAAATAACCGGCTATAGCT 57.784 33.333 23.53 7.05 41.70 3.32
1768 3104 8.448615 CCATAGTTTTAAATAACCGGCTATAGC 58.551 37.037 16.78 16.78 41.14 2.97
1769 3105 9.498176 ACCATAGTTTTAAATAACCGGCTATAG 57.502 33.333 0.00 0.00 0.00 1.31
1770 3106 9.850198 AACCATAGTTTTAAATAACCGGCTATA 57.150 29.630 0.00 0.00 29.61 1.31
1771 3107 8.756486 AACCATAGTTTTAAATAACCGGCTAT 57.244 30.769 0.00 0.00 29.61 2.97
1772 3108 9.678260 TTAACCATAGTTTTAAATAACCGGCTA 57.322 29.630 0.00 0.00 37.42 3.93
1773 3109 8.578448 TTAACCATAGTTTTAAATAACCGGCT 57.422 30.769 0.00 0.00 37.42 5.52
1774 3110 9.806203 ATTTAACCATAGTTTTAAATAACCGGC 57.194 29.630 0.00 0.00 36.54 6.13
1803 3139 9.436957 CCAGTGTAATCTGAAACAAATACTACT 57.563 33.333 0.00 0.00 37.61 2.57
1804 3140 9.216117 ACCAGTGTAATCTGAAACAAATACTAC 57.784 33.333 0.00 0.00 37.61 2.73
1805 3141 9.787435 AACCAGTGTAATCTGAAACAAATACTA 57.213 29.630 0.00 0.00 37.61 1.82
1806 3142 8.567948 CAACCAGTGTAATCTGAAACAAATACT 58.432 33.333 0.00 0.00 37.61 2.12
1807 3143 8.349983 ACAACCAGTGTAATCTGAAACAAATAC 58.650 33.333 0.00 0.00 39.29 1.89
1808 3144 8.458573 ACAACCAGTGTAATCTGAAACAAATA 57.541 30.769 0.00 0.00 39.29 1.40
1809 3145 7.346751 ACAACCAGTGTAATCTGAAACAAAT 57.653 32.000 0.00 0.00 39.29 2.32
1810 3146 6.767524 ACAACCAGTGTAATCTGAAACAAA 57.232 33.333 0.00 0.00 39.29 2.83
1811 3147 9.733556 ATATACAACCAGTGTAATCTGAAACAA 57.266 29.630 0.00 0.00 45.81 2.83
1812 3148 9.161629 CATATACAACCAGTGTAATCTGAAACA 57.838 33.333 0.00 0.00 45.81 2.83
1813 3149 9.162764 ACATATACAACCAGTGTAATCTGAAAC 57.837 33.333 0.00 0.00 45.81 2.78
1890 3227 8.407064 CAGTTAACGATAGATACTCCAAACTCT 58.593 37.037 0.00 0.00 41.38 3.24
1899 3236 7.574592 GCGGGAATACAGTTAACGATAGATACT 60.575 40.741 0.00 0.00 41.38 2.12
1905 3242 3.550639 CCGCGGGAATACAGTTAACGATA 60.551 47.826 20.10 0.00 0.00 2.92
1906 3243 2.466846 CGCGGGAATACAGTTAACGAT 58.533 47.619 0.00 0.00 0.00 3.73
1916 3257 0.923403 GTCGTTAACCGCGGGAATAC 59.077 55.000 31.76 19.47 36.19 1.89
1918 3259 0.738412 CTGTCGTTAACCGCGGGAAT 60.738 55.000 31.76 17.72 36.19 3.01
1926 3267 5.831702 TCTTCTATCCTCTGTCGTTAACC 57.168 43.478 0.00 0.00 0.00 2.85
1935 3276 5.073311 TCGGTTGTTTCTTCTATCCTCTG 57.927 43.478 0.00 0.00 0.00 3.35
1936 3277 5.246429 AGTTCGGTTGTTTCTTCTATCCTCT 59.754 40.000 0.00 0.00 0.00 3.69
1953 3294 2.039084 AGAATTTGCTCTCCAGTTCGGT 59.961 45.455 0.00 0.00 35.57 4.69
1956 3297 7.622893 ATCTTTAGAATTTGCTCTCCAGTTC 57.377 36.000 0.00 0.00 0.00 3.01
1969 3310 9.393512 CACCTCTTGATCTCAATCTTTAGAATT 57.606 33.333 0.00 0.00 35.02 2.17
1973 3314 6.538021 CACCACCTCTTGATCTCAATCTTTAG 59.462 42.308 0.00 0.00 35.02 1.85
1977 3318 4.081198 GTCACCACCTCTTGATCTCAATCT 60.081 45.833 0.00 0.00 35.02 2.40
1988 3329 0.249398 GCCATACGTCACCACCTCTT 59.751 55.000 0.00 0.00 0.00 2.85
1992 3333 0.460284 CTGAGCCATACGTCACCACC 60.460 60.000 0.00 0.00 0.00 4.61
1996 3337 4.832590 ATAGTACTGAGCCATACGTCAC 57.167 45.455 5.39 0.00 0.00 3.67
1997 3338 4.037565 CCAATAGTACTGAGCCATACGTCA 59.962 45.833 5.39 0.00 0.00 4.35
1998 3339 4.277672 TCCAATAGTACTGAGCCATACGTC 59.722 45.833 5.39 0.00 0.00 4.34
2000 3341 4.037565 TGTCCAATAGTACTGAGCCATACG 59.962 45.833 5.39 0.00 0.00 3.06
2001 3342 5.069251 AGTGTCCAATAGTACTGAGCCATAC 59.931 44.000 5.39 0.00 0.00 2.39
2002 3343 5.069119 CAGTGTCCAATAGTACTGAGCCATA 59.931 44.000 5.39 0.00 42.28 2.74
2003 3344 4.033709 AGTGTCCAATAGTACTGAGCCAT 58.966 43.478 5.39 0.00 0.00 4.40
2004 3345 3.195610 CAGTGTCCAATAGTACTGAGCCA 59.804 47.826 5.39 0.00 42.28 4.75
2005 3346 3.786635 CAGTGTCCAATAGTACTGAGCC 58.213 50.000 5.39 0.00 42.28 4.70
2006 3347 3.190874 GCAGTGTCCAATAGTACTGAGC 58.809 50.000 5.39 0.00 42.28 4.26
2009 3350 2.540515 CGGCAGTGTCCAATAGTACTG 58.459 52.381 5.39 0.00 42.51 2.74
2010 3351 1.480954 CCGGCAGTGTCCAATAGTACT 59.519 52.381 0.00 0.00 0.00 2.73
2011 3352 1.472728 CCCGGCAGTGTCCAATAGTAC 60.473 57.143 0.00 0.00 0.00 2.73
2012 3353 0.828022 CCCGGCAGTGTCCAATAGTA 59.172 55.000 0.00 0.00 0.00 1.82
2013 3354 0.907704 TCCCGGCAGTGTCCAATAGT 60.908 55.000 0.00 0.00 0.00 2.12
2014 3355 0.462047 GTCCCGGCAGTGTCCAATAG 60.462 60.000 0.00 0.00 0.00 1.73
2015 3356 1.600107 GTCCCGGCAGTGTCCAATA 59.400 57.895 0.00 0.00 0.00 1.90
2018 3359 4.954118 AGGTCCCGGCAGTGTCCA 62.954 66.667 0.00 0.00 0.00 4.02
2019 3360 4.083862 GAGGTCCCGGCAGTGTCC 62.084 72.222 0.00 0.00 0.00 4.02
2020 3361 4.083862 GGAGGTCCCGGCAGTGTC 62.084 72.222 0.00 0.00 0.00 3.67
2021 3362 4.640690 AGGAGGTCCCGGCAGTGT 62.641 66.667 0.00 0.00 40.87 3.55
2023 3364 3.846405 TTCAGGAGGTCCCGGCAGT 62.846 63.158 0.00 0.00 40.87 4.40
2024 3365 3.003173 TTCAGGAGGTCCCGGCAG 61.003 66.667 0.00 0.00 40.87 4.85
2025 3366 3.003173 CTTCAGGAGGTCCCGGCA 61.003 66.667 0.00 0.00 40.87 5.69
2038 3754 2.192861 CGGTGCCCAAAGTGCTTCA 61.193 57.895 0.00 0.00 0.00 3.02
2039 3755 2.130073 GACGGTGCCCAAAGTGCTTC 62.130 60.000 0.00 0.00 0.00 3.86
2042 3758 3.670377 GGACGGTGCCCAAAGTGC 61.670 66.667 0.00 0.00 0.00 4.40
2043 3759 1.388065 TTTGGACGGTGCCCAAAGTG 61.388 55.000 9.31 0.00 45.64 3.16
2071 3879 2.676748 AGAGGATGTGAGAGTGGGATC 58.323 52.381 0.00 0.00 0.00 3.36
2147 3957 7.856145 ATTATTGACAGGAGATGTTTCAGAC 57.144 36.000 0.00 0.00 44.17 3.51
2155 3965 9.489084 TCCGTTAATAATTATTGACAGGAGATG 57.511 33.333 25.21 13.70 34.01 2.90
2158 3968 9.712305 AGATCCGTTAATAATTATTGACAGGAG 57.288 33.333 28.52 18.09 37.77 3.69
2160 3970 8.230486 GCAGATCCGTTAATAATTATTGACAGG 58.770 37.037 24.58 23.72 33.33 4.00
2161 3971 8.773645 TGCAGATCCGTTAATAATTATTGACAG 58.226 33.333 24.58 17.30 33.33 3.51
2162 3972 8.556194 GTGCAGATCCGTTAATAATTATTGACA 58.444 33.333 24.58 12.37 33.33 3.58
2184 4006 3.218453 CGGGAATTATTATGGGTGTGCA 58.782 45.455 0.00 0.00 0.00 4.57
2185 4007 2.030274 GCGGGAATTATTATGGGTGTGC 60.030 50.000 0.00 0.00 0.00 4.57
2186 4008 3.218453 TGCGGGAATTATTATGGGTGTG 58.782 45.455 0.00 0.00 0.00 3.82
2187 4009 3.586470 TGCGGGAATTATTATGGGTGT 57.414 42.857 0.00 0.00 0.00 4.16
2188 4010 4.398044 GGTATGCGGGAATTATTATGGGTG 59.602 45.833 0.00 0.00 0.00 4.61
2189 4011 4.043561 TGGTATGCGGGAATTATTATGGGT 59.956 41.667 0.00 0.00 0.00 4.51
2190 4012 4.594970 TGGTATGCGGGAATTATTATGGG 58.405 43.478 0.00 0.00 0.00 4.00
2191 4013 6.582677 TTTGGTATGCGGGAATTATTATGG 57.417 37.500 0.00 0.00 0.00 2.74
2197 4019 5.010933 TGTCTTTTTGGTATGCGGGAATTA 58.989 37.500 0.00 0.00 0.00 1.40
2202 4024 3.866883 AATGTCTTTTTGGTATGCGGG 57.133 42.857 0.00 0.00 0.00 6.13
2209 4031 4.764823 TCGCTGGATAAATGTCTTTTTGGT 59.235 37.500 0.00 0.00 0.00 3.67
2213 4035 5.010282 AGGTTCGCTGGATAAATGTCTTTT 58.990 37.500 0.00 0.00 0.00 2.27
2219 4041 3.941483 ACAGAAGGTTCGCTGGATAAATG 59.059 43.478 0.00 0.00 36.47 2.32
2220 4042 4.222124 ACAGAAGGTTCGCTGGATAAAT 57.778 40.909 0.00 0.00 36.47 1.40
2229 4051 4.678742 GGTATACGATAACAGAAGGTTCGC 59.321 45.833 0.00 0.00 40.96 4.70
2232 4054 7.713942 GGAAATGGTATACGATAACAGAAGGTT 59.286 37.037 0.34 0.00 43.62 3.50
2240 4062 7.254227 TGCAAAGGAAATGGTATACGATAAC 57.746 36.000 0.34 0.00 0.00 1.89
2256 4078 4.280425 TGTAAAGCATCATGTTGCAAAGGA 59.720 37.500 26.26 8.21 45.23 3.36
2272 4094 3.317993 TCTTGCCTCAGGTTTTGTAAAGC 59.682 43.478 0.00 0.00 0.00 3.51
2285 4107 7.468631 GCGAGGATAAAATAAAATCTTGCCTCA 60.469 37.037 0.00 0.00 38.41 3.86
2301 4123 7.722795 TCAAAATATTGATCGCGAGGATAAA 57.277 32.000 16.66 4.56 40.59 1.40
2369 4191 5.238650 GGGGACAACGGAATACATGAATAAG 59.761 44.000 0.00 0.00 0.00 1.73
2370 4192 5.127491 GGGGACAACGGAATACATGAATAA 58.873 41.667 0.00 0.00 0.00 1.40
2390 4212 2.631545 CCCTAAGGTATTAGTCACGGGG 59.368 54.545 0.00 0.00 37.31 5.73
2394 4216 5.279556 GGAGATGCCCTAAGGTATTAGTCAC 60.280 48.000 0.00 0.00 38.81 3.67
2422 4244 1.070275 GTCCGTTTTGAGGGTCCGT 59.930 57.895 0.00 0.00 0.00 4.69
2433 4255 8.189460 GTCTAGAGACAAATACTATGTCCGTTT 58.811 37.037 4.77 0.00 46.60 3.60
2450 4272 0.465824 TGGCCGGCTAGTCTAGAGAC 60.466 60.000 28.56 5.04 45.08 3.36
2452 4274 1.271102 GAATGGCCGGCTAGTCTAGAG 59.729 57.143 29.85 3.72 0.00 2.43
2454 4276 1.040646 TGAATGGCCGGCTAGTCTAG 58.959 55.000 34.71 2.18 0.00 2.43
2456 4278 0.107654 GTTGAATGGCCGGCTAGTCT 60.108 55.000 34.71 15.83 0.00 3.24
2517 4371 1.640428 TCTGCTTAGCGTGGAATTCG 58.360 50.000 0.00 0.00 0.00 3.34
2526 4380 2.284263 TGACAGTCATCTGCTTAGCG 57.716 50.000 0.00 0.00 44.77 4.26
2529 4383 7.119699 CCAGTTTAAATGACAGTCATCTGCTTA 59.880 37.037 16.69 8.65 44.77 3.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.