Multiple sequence alignment - TraesCS7D01G139800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G139800 chr7D 100.000 3447 0 0 786 4232 89478402 89474956 0.000000e+00 6366.0
1 TraesCS7D01G139800 chr7D 100.000 253 0 0 1 253 89479187 89478935 6.410000e-128 468.0
2 TraesCS7D01G139800 chr7D 81.739 115 20 1 4028 4142 89281809 89281696 1.250000e-15 95.3
3 TraesCS7D01G139800 chr7B 95.020 1466 54 10 2096 3550 40299183 40297726 0.000000e+00 2285.0
4 TraesCS7D01G139800 chr7B 94.552 1138 40 7 786 1904 40300512 40299378 0.000000e+00 1738.0
5 TraesCS7D01G139800 chr7B 77.672 421 69 20 3818 4226 40295813 40295406 2.540000e-57 233.0
6 TraesCS7D01G139800 chr7B 91.813 171 8 3 1929 2098 40299385 40299220 2.540000e-57 233.0
7 TraesCS7D01G139800 chr7B 95.420 131 5 1 4100 4230 40295461 40295332 1.540000e-49 207.0
8 TraesCS7D01G139800 chr7B 90.598 117 3 7 145 253 40301375 40301259 9.480000e-32 148.0
9 TraesCS7D01G139800 chr7B 94.545 55 2 1 1 54 40301603 40301549 2.710000e-12 84.2
10 TraesCS7D01G139800 chr7A 96.629 1157 29 5 2402 3548 90505318 90504162 0.000000e+00 1912.0
11 TraesCS7D01G139800 chr7A 94.066 1129 45 12 786 1896 90507221 90506097 0.000000e+00 1694.0
12 TraesCS7D01G139800 chr7A 91.234 308 24 1 2096 2400 90505855 90505548 2.350000e-112 416.0
13 TraesCS7D01G139800 chr7A 97.037 135 4 0 4098 4232 90488596 90488462 1.180000e-55 228.0
14 TraesCS7D01G139800 chr7A 92.105 152 10 1 1946 2097 90506086 90505937 3.310000e-51 213.0
15 TraesCS7D01G139800 chr7A 91.379 116 7 2 139 253 90508186 90508073 5.670000e-34 156.0
16 TraesCS7D01G139800 chr7A 91.111 90 7 1 1 89 90508410 90508321 2.070000e-23 121.0
17 TraesCS7D01G139800 chr7A 85.000 80 9 2 3783 3860 90489044 90488966 1.260000e-10 78.7
18 TraesCS7D01G139800 chr3D 87.255 306 31 4 3031 3334 19057862 19058161 4.050000e-90 342.0
19 TraesCS7D01G139800 chr6B 86.971 307 29 9 3031 3334 682908632 682908334 6.780000e-88 335.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G139800 chr7D 89474956 89479187 4231 True 3417.000000 6366 100.000000 1 4232 2 chr7D.!!$R2 4231
1 TraesCS7D01G139800 chr7B 40295332 40301603 6271 True 704.028571 2285 91.374286 1 4230 7 chr7B.!!$R1 4229
2 TraesCS7D01G139800 chr7A 90504162 90508410 4248 True 752.000000 1912 92.754000 1 3548 6 chr7A.!!$R2 3547

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
228 337 0.178935 CCCCATCCCTCTCCTCTCTC 60.179 65.0 0.00 0.00 0.00 3.20 F
1059 1905 0.169451 TCTCGTGCGATTCGTTGCTA 59.831 50.0 8.03 0.00 0.00 3.49 F
1194 2047 0.179097 GGACTGCGATTCCACTCCTC 60.179 60.0 0.00 0.00 32.82 3.71 F
2253 3201 2.438021 TCCCCTTCATTAATGAGACGGG 59.562 50.0 26.89 26.89 38.88 5.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1163 2016 0.099968 CGCAGTCCTAAATCCGACGA 59.900 55.0 0.00 0.00 34.10 4.20 R
2065 2923 1.595466 GCTGGATGAGCTGGAGATTG 58.405 55.0 0.00 0.00 45.21 2.67 R
2836 4020 1.872388 TGCTCGGATCGTGTTTTTGA 58.128 45.0 0.00 0.00 0.00 2.69 R
3952 6825 0.108207 ATGGAGTGGCTGCTGCTATC 59.892 55.0 15.64 10.39 39.59 2.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 47 1.386533 CATGTTGAGTCCATCCTGGC 58.613 55.000 0.00 0.00 37.47 4.85
54 56 0.991355 TCCATCCTGGCCCCGTTTAT 60.991 55.000 0.00 0.00 37.47 1.40
55 57 0.768622 CCATCCTGGCCCCGTTTATA 59.231 55.000 0.00 0.00 0.00 0.98
75 94 3.149005 ACCCAGATAGAGATCGAGACC 57.851 52.381 0.00 0.00 37.15 3.85
132 194 2.186644 CACGCATCCACGGATCCA 59.813 61.111 13.41 0.00 37.37 3.41
133 195 2.173669 CACGCATCCACGGATCCAC 61.174 63.158 13.41 0.00 37.37 4.02
134 196 2.588877 CGCATCCACGGATCCACC 60.589 66.667 13.41 0.00 31.62 4.61
143 205 2.365105 GGATCCACCCGACCCAGA 60.365 66.667 6.95 0.00 0.00 3.86
228 337 0.178935 CCCCATCCCTCTCCTCTCTC 60.179 65.000 0.00 0.00 0.00 3.20
229 338 0.859760 CCCATCCCTCTCCTCTCTCT 59.140 60.000 0.00 0.00 0.00 3.10
1059 1905 0.169451 TCTCGTGCGATTCGTTGCTA 59.831 50.000 8.03 0.00 0.00 3.49
1163 2016 6.463995 TTTAATGTTTGCTGGTTTGAGAGT 57.536 33.333 0.00 0.00 0.00 3.24
1176 2029 3.777465 TTGAGAGTCGTCGGATTTAGG 57.223 47.619 0.00 0.00 0.00 2.69
1186 2039 2.795470 GTCGGATTTAGGACTGCGATTC 59.205 50.000 0.00 0.00 37.55 2.52
1194 2047 0.179097 GGACTGCGATTCCACTCCTC 60.179 60.000 0.00 0.00 32.82 3.71
1272 2126 4.081972 TGCATAGTTCTGGTCTTCTCAGTC 60.082 45.833 0.00 0.00 34.15 3.51
1299 2156 8.350722 TCGATGTAGAGTTACCATATCTTGTTC 58.649 37.037 0.00 0.00 0.00 3.18
1510 2368 8.054152 TCACATTTAGATGCATAATGTTGTGT 57.946 30.769 19.17 8.19 39.70 3.72
1513 2371 9.357652 ACATTTAGATGCATAATGTTGTGTTTC 57.642 29.630 16.96 0.00 38.89 2.78
1705 2563 5.050091 GTGAACATACTTCAGAGGTGTGTTG 60.050 44.000 26.04 8.32 44.62 3.33
1755 2613 4.199310 TGCATTGTTCCCTGCTAATCTAC 58.801 43.478 0.00 0.00 39.16 2.59
2080 2938 5.893897 AGAAAAACAATCTCCAGCTCATC 57.106 39.130 0.00 0.00 0.00 2.92
2119 3060 9.359653 ACTAGAATTTATCCTGGGAATCAAATG 57.640 33.333 0.00 0.00 0.00 2.32
2121 3062 8.474710 AGAATTTATCCTGGGAATCAAATGAG 57.525 34.615 0.00 0.00 0.00 2.90
2143 3084 6.493802 TGAGAAGTGGTTACTGAATACTGACT 59.506 38.462 0.00 0.00 37.19 3.41
2154 3095 9.836864 TTACTGAATACTGACTATACGAGGTAA 57.163 33.333 0.00 0.00 0.00 2.85
2156 3097 9.352191 ACTGAATACTGACTATACGAGGTAATT 57.648 33.333 0.00 0.00 0.00 1.40
2163 3104 8.861086 ACTGACTATACGAGGTAATTCATGAAT 58.139 33.333 15.36 15.36 0.00 2.57
2164 3105 9.133627 CTGACTATACGAGGTAATTCATGAATG 57.866 37.037 21.39 10.24 0.00 2.67
2251 3199 4.757149 GGAATCCCCTTCATTAATGAGACG 59.243 45.833 17.28 10.40 38.19 4.18
2253 3201 2.438021 TCCCCTTCATTAATGAGACGGG 59.562 50.000 26.89 26.89 38.88 5.28
2615 3796 8.248945 TGTTACCTTAGTATTAGACTGAAGTGC 58.751 37.037 0.00 0.00 39.39 4.40
2820 4004 4.019231 ACTCAAGAGGGTTACCAATCTTCC 60.019 45.833 15.35 0.00 40.13 3.46
2832 4016 2.631012 AATCTTCCGGGAGCCATGCC 62.631 60.000 4.24 0.00 0.00 4.40
2836 4020 4.431131 CCGGGAGCCATGCCTTGT 62.431 66.667 0.00 0.00 33.98 3.16
2838 4022 2.356278 GGGAGCCATGCCTTGTCA 59.644 61.111 0.00 0.00 33.20 3.58
2928 4112 2.235402 TCAGTGGTCCGAAATACCTTCC 59.765 50.000 0.00 0.00 37.91 3.46
2937 4121 3.547613 CCGAAATACCTTCCGACGTAGAG 60.548 52.174 0.00 0.00 0.00 2.43
3296 4480 5.514500 TTTTCTTCATTGCCCTACTACCT 57.486 39.130 0.00 0.00 0.00 3.08
3369 4553 4.387256 GGAAAAGATCTTGTCAGTCAGTCG 59.613 45.833 24.03 0.00 0.00 4.18
3445 4633 2.033801 GGAATTTGTGATGGATCTGGCG 59.966 50.000 0.00 0.00 0.00 5.69
3517 4708 6.206438 TGCATACTGTTTTTCATGTCTGCTTA 59.794 34.615 0.00 0.00 33.38 3.09
3535 4726 3.810743 GCTTATCTGGTGGGTTTGTGAGT 60.811 47.826 0.00 0.00 0.00 3.41
3542 4733 4.394729 TGGTGGGTTTGTGAGTATTCTTC 58.605 43.478 0.00 0.00 0.00 2.87
3550 4741 6.483640 GGTTTGTGAGTATTCTTCAGTTCAGT 59.516 38.462 0.00 0.00 0.00 3.41
3551 4742 7.012421 GGTTTGTGAGTATTCTTCAGTTCAGTT 59.988 37.037 0.00 0.00 0.00 3.16
3552 4743 7.715265 TTGTGAGTATTCTTCAGTTCAGTTC 57.285 36.000 0.00 0.00 0.00 3.01
3553 4744 6.816136 TGTGAGTATTCTTCAGTTCAGTTCA 58.184 36.000 0.00 0.00 0.00 3.18
3554 4745 6.925718 TGTGAGTATTCTTCAGTTCAGTTCAG 59.074 38.462 0.00 0.00 0.00 3.02
3555 4746 6.926272 GTGAGTATTCTTCAGTTCAGTTCAGT 59.074 38.462 0.00 0.00 0.00 3.41
3556 4747 7.439655 GTGAGTATTCTTCAGTTCAGTTCAGTT 59.560 37.037 0.00 0.00 0.00 3.16
3558 4749 8.738645 AGTATTCTTCAGTTCAGTTCAGTTTT 57.261 30.769 0.00 0.00 0.00 2.43
3559 4750 9.178758 AGTATTCTTCAGTTCAGTTCAGTTTTT 57.821 29.630 0.00 0.00 0.00 1.94
3560 4751 9.439537 GTATTCTTCAGTTCAGTTCAGTTTTTC 57.560 33.333 0.00 0.00 0.00 2.29
3561 4752 7.687941 TTCTTCAGTTCAGTTCAGTTTTTCT 57.312 32.000 0.00 0.00 0.00 2.52
3563 4754 8.110860 TCTTCAGTTCAGTTCAGTTTTTCTTT 57.889 30.769 0.00 0.00 0.00 2.52
3564 4755 8.576442 TCTTCAGTTCAGTTCAGTTTTTCTTTT 58.424 29.630 0.00 0.00 0.00 2.27
3565 4756 9.196552 CTTCAGTTCAGTTCAGTTTTTCTTTTT 57.803 29.630 0.00 0.00 0.00 1.94
3597 4788 9.793259 TTTGAGAAATAGAAATAGGTGAAGTGT 57.207 29.630 0.00 0.00 0.00 3.55
3598 4789 8.777865 TGAGAAATAGAAATAGGTGAAGTGTG 57.222 34.615 0.00 0.00 0.00 3.82
3599 4790 7.824289 TGAGAAATAGAAATAGGTGAAGTGTGG 59.176 37.037 0.00 0.00 0.00 4.17
3600 4791 7.112779 AGAAATAGAAATAGGTGAAGTGTGGG 58.887 38.462 0.00 0.00 0.00 4.61
3601 4792 6.636454 AATAGAAATAGGTGAAGTGTGGGA 57.364 37.500 0.00 0.00 0.00 4.37
3602 4793 4.559862 AGAAATAGGTGAAGTGTGGGAG 57.440 45.455 0.00 0.00 0.00 4.30
3603 4794 4.168101 AGAAATAGGTGAAGTGTGGGAGA 58.832 43.478 0.00 0.00 0.00 3.71
3604 4795 4.223923 AGAAATAGGTGAAGTGTGGGAGAG 59.776 45.833 0.00 0.00 0.00 3.20
3605 4796 2.696526 TAGGTGAAGTGTGGGAGAGT 57.303 50.000 0.00 0.00 0.00 3.24
3606 4797 1.807814 AGGTGAAGTGTGGGAGAGTT 58.192 50.000 0.00 0.00 0.00 3.01
3614 4805 5.013079 TGAAGTGTGGGAGAGTTTCATGTAT 59.987 40.000 0.00 0.00 0.00 2.29
3627 4818 7.230510 AGAGTTTCATGTATTTGGTTTGCAGTA 59.769 33.333 0.00 0.00 0.00 2.74
3628 4819 7.721402 AGTTTCATGTATTTGGTTTGCAGTAA 58.279 30.769 0.00 0.00 0.00 2.24
3632 4823 7.946207 TCATGTATTTGGTTTGCAGTAAAGAA 58.054 30.769 0.00 0.00 0.00 2.52
3638 4829 7.546778 TTTGGTTTGCAGTAAAGAATTTTCC 57.453 32.000 0.00 0.00 40.09 3.13
3641 4832 7.334858 TGGTTTGCAGTAAAGAATTTTCCTTT 58.665 30.769 0.00 0.00 40.09 3.11
3642 4833 8.478877 TGGTTTGCAGTAAAGAATTTTCCTTTA 58.521 29.630 0.00 0.00 40.09 1.85
3655 4860 1.053424 TCCTTTACGCAGGGTGTTCT 58.947 50.000 0.00 0.00 34.24 3.01
3658 4863 2.218603 CTTTACGCAGGGTGTTCTTGT 58.781 47.619 0.00 0.00 0.00 3.16
3659 4864 3.395639 CTTTACGCAGGGTGTTCTTGTA 58.604 45.455 0.00 0.00 0.00 2.41
3660 4865 2.736144 TACGCAGGGTGTTCTTGTAG 57.264 50.000 0.00 0.00 0.00 2.74
3670 4875 5.699458 AGGGTGTTCTTGTAGTTTCATAACG 59.301 40.000 0.00 0.00 39.31 3.18
3680 4885 8.882415 TTGTAGTTTCATAACGAAAGAGAACT 57.118 30.769 0.00 0.00 44.26 3.01
3685 4890 8.148999 AGTTTCATAACGAAAGAGAACTAACCT 58.851 33.333 0.00 0.00 44.26 3.50
3697 4902 7.951347 AGAGAACTAACCTTTCGTATAAGGA 57.049 36.000 16.69 0.12 46.28 3.36
3722 4962 2.168521 TCGGGTAGAAAATCTGAGCCTG 59.831 50.000 0.00 0.00 0.00 4.85
3723 4963 2.743183 CGGGTAGAAAATCTGAGCCTGG 60.743 54.545 0.00 0.00 0.00 4.45
3726 4966 4.385754 GGGTAGAAAATCTGAGCCTGGAAT 60.386 45.833 0.00 0.00 0.00 3.01
3727 4967 5.196695 GGTAGAAAATCTGAGCCTGGAATT 58.803 41.667 0.00 0.00 0.00 2.17
3728 4968 5.298026 GGTAGAAAATCTGAGCCTGGAATTC 59.702 44.000 0.00 0.00 0.00 2.17
3729 4969 4.276642 AGAAAATCTGAGCCTGGAATTCC 58.723 43.478 18.17 18.17 0.00 3.01
3730 4970 4.017683 AGAAAATCTGAGCCTGGAATTCCT 60.018 41.667 24.73 4.76 36.82 3.36
3731 4971 3.294038 AATCTGAGCCTGGAATTCCTG 57.706 47.619 24.73 22.93 36.82 3.86
3750 4990 2.676839 CTGGCAGCATCTAGACAAACTG 59.323 50.000 0.00 1.69 0.00 3.16
3753 4993 3.329386 GCAGCATCTAGACAAACTGTGA 58.671 45.455 0.00 0.00 0.00 3.58
3754 4994 3.748048 GCAGCATCTAGACAAACTGTGAA 59.252 43.478 0.00 0.00 0.00 3.18
3755 4995 4.142945 GCAGCATCTAGACAAACTGTGAAG 60.143 45.833 0.00 0.00 0.00 3.02
3756 4996 5.233225 CAGCATCTAGACAAACTGTGAAGA 58.767 41.667 0.00 0.00 0.00 2.87
3757 4997 5.698089 CAGCATCTAGACAAACTGTGAAGAA 59.302 40.000 0.00 0.00 0.00 2.52
3758 4998 5.698545 AGCATCTAGACAAACTGTGAAGAAC 59.301 40.000 0.00 0.00 0.00 3.01
3769 5009 2.036556 GTGAAGAACACGGCACAATG 57.963 50.000 0.00 0.00 39.78 2.82
3773 6468 1.229428 AGAACACGGCACAATGACAG 58.771 50.000 0.00 0.00 0.00 3.51
3776 6471 0.884704 ACACGGCACAATGACAGACC 60.885 55.000 0.00 0.00 0.00 3.85
3778 6473 2.040544 CGGCACAATGACAGACCCC 61.041 63.158 0.00 0.00 0.00 4.95
3779 6474 1.678970 GGCACAATGACAGACCCCC 60.679 63.158 0.00 0.00 0.00 5.40
3782 6477 0.962356 CACAATGACAGACCCCCTGC 60.962 60.000 0.00 0.00 46.81 4.85
3793 6488 4.722700 CCCCTGCCGACCCAGTTG 62.723 72.222 0.00 0.00 0.00 3.16
3797 6492 2.847234 TGCCGACCCAGTTGAGGT 60.847 61.111 0.00 0.00 41.50 3.85
3805 6500 2.375146 ACCCAGTTGAGGTCACAAAAC 58.625 47.619 0.00 0.00 28.99 2.43
3806 6501 2.025321 ACCCAGTTGAGGTCACAAAACT 60.025 45.455 0.00 0.00 28.99 2.66
3807 6502 2.618709 CCCAGTTGAGGTCACAAAACTC 59.381 50.000 0.00 0.00 30.59 3.01
3808 6503 3.278574 CCAGTTGAGGTCACAAAACTCA 58.721 45.455 0.00 0.00 39.31 3.41
3809 6504 3.313526 CCAGTTGAGGTCACAAAACTCAG 59.686 47.826 0.00 0.00 41.71 3.35
3810 6505 4.191544 CAGTTGAGGTCACAAAACTCAGA 58.808 43.478 0.00 0.00 41.71 3.27
3811 6506 4.818546 CAGTTGAGGTCACAAAACTCAGAT 59.181 41.667 0.00 0.00 41.71 2.90
3812 6507 5.991606 CAGTTGAGGTCACAAAACTCAGATA 59.008 40.000 0.00 0.00 41.71 1.98
3814 6509 7.012327 CAGTTGAGGTCACAAAACTCAGATAAA 59.988 37.037 0.00 0.00 41.71 1.40
3815 6510 7.721399 AGTTGAGGTCACAAAACTCAGATAAAT 59.279 33.333 0.00 0.00 41.71 1.40
3816 6511 7.672983 TGAGGTCACAAAACTCAGATAAATC 57.327 36.000 0.00 0.00 36.41 2.17
3821 6694 8.017946 GGTCACAAAACTCAGATAAATCAAGTC 58.982 37.037 0.00 0.00 0.00 3.01
3848 6721 6.374333 TGGAGTAGATTTACCTGCAAATGTTC 59.626 38.462 0.00 0.00 0.00 3.18
3849 6722 6.183360 GGAGTAGATTTACCTGCAAATGTTCC 60.183 42.308 0.00 0.00 0.00 3.62
3852 6725 3.634568 TTTACCTGCAAATGTTCCACG 57.365 42.857 0.00 0.00 0.00 4.94
3873 6746 8.577296 TCCACGGAGAATAATATCTCTAACAAG 58.423 37.037 4.50 0.00 44.30 3.16
3905 6778 6.034363 CGCATAATAAGATCTCTGATGAACGG 59.966 42.308 0.00 0.00 0.00 4.44
3936 6809 2.381109 CAGATGGCTCTGCTGAACG 58.619 57.895 0.00 0.00 42.36 3.95
3937 6810 1.088340 CAGATGGCTCTGCTGAACGG 61.088 60.000 0.00 0.00 42.36 4.44
3938 6811 1.219124 GATGGCTCTGCTGAACGGA 59.781 57.895 0.00 0.00 0.00 4.69
3939 6812 0.391661 GATGGCTCTGCTGAACGGAA 60.392 55.000 0.00 0.00 31.65 4.30
3940 6813 0.392193 ATGGCTCTGCTGAACGGAAG 60.392 55.000 0.00 0.00 31.65 3.46
3966 6839 3.418714 GCAGATAGCAGCAGCCAC 58.581 61.111 0.00 0.00 44.79 5.01
3972 6845 1.345741 GATAGCAGCAGCCACTCCATA 59.654 52.381 0.00 0.00 43.56 2.74
3975 6848 1.976132 GCAGCAGCCACTCCATAGGA 61.976 60.000 0.00 0.00 33.58 2.94
3980 6853 2.356125 GCAGCCACTCCATAGGAAAGAA 60.356 50.000 0.00 0.00 0.00 2.52
3993 6881 7.716998 TCCATAGGAAAGAAATCTTAGACATGC 59.283 37.037 0.00 0.00 34.61 4.06
3995 6883 9.064706 CATAGGAAAGAAATCTTAGACATGCAT 57.935 33.333 0.00 0.00 34.61 3.96
3996 6884 7.951347 AGGAAAGAAATCTTAGACATGCATT 57.049 32.000 0.00 0.00 34.61 3.56
4001 6889 7.009568 AGAAATCTTAGACATGCATTTCGAC 57.990 36.000 7.19 0.00 38.14 4.20
4039 6945 4.077184 CACGCCTACGGGGAAGCA 62.077 66.667 3.82 0.00 46.04 3.91
4080 6986 2.650116 CCAGGTCGAGGTCTGGGTG 61.650 68.421 17.15 0.00 44.99 4.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 47 4.413760 TCTCTATCTGGGTATAAACGGGG 58.586 47.826 0.00 0.00 0.00 5.73
54 56 3.306849 CGGTCTCGATCTCTATCTGGGTA 60.307 52.174 0.00 0.00 39.00 3.69
55 57 2.551287 CGGTCTCGATCTCTATCTGGGT 60.551 54.545 0.00 0.00 39.00 4.51
127 189 2.732619 GGTCTGGGTCGGGTGGATC 61.733 68.421 0.00 0.00 0.00 3.36
228 337 1.944177 TTGGGACTTGGGAGAGAGAG 58.056 55.000 0.00 0.00 0.00 3.20
229 338 2.225624 TGATTGGGACTTGGGAGAGAGA 60.226 50.000 0.00 0.00 0.00 3.10
984 1830 1.106285 GCATGGGGAAGTCAATCCAC 58.894 55.000 0.00 0.00 43.65 4.02
1023 1869 1.226262 GAGTCGAGGGGAGAGAGCT 59.774 63.158 0.00 0.00 0.00 4.09
1163 2016 0.099968 CGCAGTCCTAAATCCGACGA 59.900 55.000 0.00 0.00 34.10 4.20
1176 2029 0.532573 TGAGGAGTGGAATCGCAGTC 59.467 55.000 0.00 0.00 0.00 3.51
1186 2039 2.041620 TCCCTTCCAATTTGAGGAGTGG 59.958 50.000 5.85 0.00 36.33 4.00
1194 2047 1.499368 CCCCCATCCCTTCCAATTTG 58.501 55.000 0.00 0.00 0.00 2.32
1272 2126 7.877003 ACAAGATATGGTAACTCTACATCGAG 58.123 38.462 0.00 0.00 37.07 4.04
1322 2179 3.321682 AGCTATTCAGATCAGAGGAGCAC 59.678 47.826 19.03 0.00 32.52 4.40
1330 2187 8.883954 TGTCAATCTTAAGCTATTCAGATCAG 57.116 34.615 0.00 0.00 29.85 2.90
1510 2368 5.165961 AGCATCTGCAAAGTAGTAGGAAA 57.834 39.130 4.79 0.00 45.16 3.13
1513 2371 5.011090 TGTAGCATCTGCAAAGTAGTAGG 57.989 43.478 4.79 0.00 45.16 3.18
1556 2414 6.461110 AGCTTTTCAATGACTTCCATATGG 57.539 37.500 16.25 16.25 34.45 2.74
1609 2467 1.211457 CCATGTAAGAAGGGCAGAGCT 59.789 52.381 0.00 0.00 0.00 4.09
1730 2588 5.448654 AGATTAGCAGGGAACAATGCATAA 58.551 37.500 0.00 0.00 43.65 1.90
1731 2589 5.052693 AGATTAGCAGGGAACAATGCATA 57.947 39.130 0.00 0.00 43.65 3.14
1732 2590 3.907221 AGATTAGCAGGGAACAATGCAT 58.093 40.909 0.00 0.00 43.65 3.96
1936 2794 8.482852 AGTGCCAAAAATAGCAATAATAGGAT 57.517 30.769 0.00 0.00 41.48 3.24
1953 2811 9.851686 ATAGAAATATGTTCATCTAGTGCCAAA 57.148 29.630 0.00 0.00 0.00 3.28
2008 2866 6.484643 GCATTCACTGTCATCAATACATACCT 59.515 38.462 0.00 0.00 0.00 3.08
2052 2910 7.502226 TGAGCTGGAGATTGTTTTTCTTCTAAA 59.498 33.333 0.00 0.00 0.00 1.85
2053 2911 6.998074 TGAGCTGGAGATTGTTTTTCTTCTAA 59.002 34.615 0.00 0.00 0.00 2.10
2054 2912 6.533730 TGAGCTGGAGATTGTTTTTCTTCTA 58.466 36.000 0.00 0.00 0.00 2.10
2065 2923 1.595466 GCTGGATGAGCTGGAGATTG 58.405 55.000 0.00 0.00 45.21 2.67
2119 3060 6.926313 AGTCAGTATTCAGTAACCACTTCTC 58.074 40.000 0.00 0.00 30.46 2.87
2121 3062 9.733219 GTATAGTCAGTATTCAGTAACCACTTC 57.267 37.037 0.00 0.00 30.46 3.01
2173 3114 6.014499 TCCTGCTAGCACCTAAACTATATTCC 60.014 42.308 14.93 0.00 0.00 3.01
2174 3115 6.994221 TCCTGCTAGCACCTAAACTATATTC 58.006 40.000 14.93 0.00 0.00 1.75
2175 3116 6.996180 TCCTGCTAGCACCTAAACTATATT 57.004 37.500 14.93 0.00 0.00 1.28
2176 3117 6.070538 CCATCCTGCTAGCACCTAAACTATAT 60.071 42.308 14.93 0.00 0.00 0.86
2177 3118 5.246203 CCATCCTGCTAGCACCTAAACTATA 59.754 44.000 14.93 0.00 0.00 1.31
2178 3119 4.040952 CCATCCTGCTAGCACCTAAACTAT 59.959 45.833 14.93 0.00 0.00 2.12
2179 3120 3.388024 CCATCCTGCTAGCACCTAAACTA 59.612 47.826 14.93 0.00 0.00 2.24
2251 3199 4.660789 TTACAGATTAGTAAGCGTCCCC 57.339 45.455 0.00 0.00 30.88 4.81
2253 3201 7.569591 GCATTGATTACAGATTAGTAAGCGTCC 60.570 40.741 0.00 0.00 41.83 4.79
2400 3351 5.711976 AGCAGCCAATACAAGTTCAAGTTAT 59.288 36.000 0.00 0.00 0.00 1.89
2406 3585 2.161855 CCAGCAGCCAATACAAGTTCA 58.838 47.619 0.00 0.00 0.00 3.18
2820 4004 2.825836 GACAAGGCATGGCTCCCG 60.826 66.667 23.56 15.98 32.61 5.14
2832 4016 3.799035 CTCGGATCGTGTTTTTGACAAG 58.201 45.455 0.00 0.00 40.65 3.16
2836 4020 1.872388 TGCTCGGATCGTGTTTTTGA 58.128 45.000 0.00 0.00 0.00 2.69
2838 4022 2.604614 GCTTTGCTCGGATCGTGTTTTT 60.605 45.455 0.00 0.00 0.00 1.94
2928 4112 4.034279 CCTTCTCTAAAGGACTCTACGTCG 59.966 50.000 0.00 0.00 43.79 5.12
2937 4121 7.395617 ACCTTTTATGACCTTCTCTAAAGGAC 58.604 38.462 15.38 5.21 41.53 3.85
3296 4480 3.243569 CGCCATTTACAAACCAGGTGAAA 60.244 43.478 0.00 0.00 0.00 2.69
3445 4633 2.486191 CCAATATCCAGGCCTCACACTC 60.486 54.545 0.00 0.00 0.00 3.51
3517 4708 4.289672 AGAATACTCACAAACCCACCAGAT 59.710 41.667 0.00 0.00 0.00 2.90
3535 4726 9.396022 AGAAAAACTGAACTGAACTGAAGAATA 57.604 29.630 0.00 0.00 0.00 1.75
3573 4764 7.824289 CCACACTTCACCTATTTCTATTTCTCA 59.176 37.037 0.00 0.00 0.00 3.27
3574 4765 7.281100 CCCACACTTCACCTATTTCTATTTCTC 59.719 40.741 0.00 0.00 0.00 2.87
3575 4766 7.037586 TCCCACACTTCACCTATTTCTATTTCT 60.038 37.037 0.00 0.00 0.00 2.52
3576 4767 7.110155 TCCCACACTTCACCTATTTCTATTTC 58.890 38.462 0.00 0.00 0.00 2.17
3577 4768 7.027874 TCCCACACTTCACCTATTTCTATTT 57.972 36.000 0.00 0.00 0.00 1.40
3578 4769 6.443849 TCTCCCACACTTCACCTATTTCTATT 59.556 38.462 0.00 0.00 0.00 1.73
3579 4770 5.964477 TCTCCCACACTTCACCTATTTCTAT 59.036 40.000 0.00 0.00 0.00 1.98
3580 4771 5.338632 TCTCCCACACTTCACCTATTTCTA 58.661 41.667 0.00 0.00 0.00 2.10
3581 4772 4.168101 TCTCCCACACTTCACCTATTTCT 58.832 43.478 0.00 0.00 0.00 2.52
3582 4773 4.020128 ACTCTCCCACACTTCACCTATTTC 60.020 45.833 0.00 0.00 0.00 2.17
3583 4774 3.910627 ACTCTCCCACACTTCACCTATTT 59.089 43.478 0.00 0.00 0.00 1.40
3584 4775 3.521727 ACTCTCCCACACTTCACCTATT 58.478 45.455 0.00 0.00 0.00 1.73
3585 4776 3.191888 ACTCTCCCACACTTCACCTAT 57.808 47.619 0.00 0.00 0.00 2.57
3586 4777 2.696526 ACTCTCCCACACTTCACCTA 57.303 50.000 0.00 0.00 0.00 3.08
3587 4778 1.807814 AACTCTCCCACACTTCACCT 58.192 50.000 0.00 0.00 0.00 4.00
3588 4779 2.158813 TGAAACTCTCCCACACTTCACC 60.159 50.000 0.00 0.00 0.00 4.02
3589 4780 3.194005 TGAAACTCTCCCACACTTCAC 57.806 47.619 0.00 0.00 0.00 3.18
3590 4781 3.136443 ACATGAAACTCTCCCACACTTCA 59.864 43.478 0.00 0.00 0.00 3.02
3591 4782 3.744660 ACATGAAACTCTCCCACACTTC 58.255 45.455 0.00 0.00 0.00 3.01
3592 4783 3.864789 ACATGAAACTCTCCCACACTT 57.135 42.857 0.00 0.00 0.00 3.16
3593 4784 5.505181 AATACATGAAACTCTCCCACACT 57.495 39.130 0.00 0.00 0.00 3.55
3594 4785 5.106157 CCAAATACATGAAACTCTCCCACAC 60.106 44.000 0.00 0.00 0.00 3.82
3595 4786 5.009631 CCAAATACATGAAACTCTCCCACA 58.990 41.667 0.00 0.00 0.00 4.17
3596 4787 5.010282 ACCAAATACATGAAACTCTCCCAC 58.990 41.667 0.00 0.00 0.00 4.61
3597 4788 5.255397 ACCAAATACATGAAACTCTCCCA 57.745 39.130 0.00 0.00 0.00 4.37
3598 4789 6.389906 CAAACCAAATACATGAAACTCTCCC 58.610 40.000 0.00 0.00 0.00 4.30
3599 4790 5.863935 GCAAACCAAATACATGAAACTCTCC 59.136 40.000 0.00 0.00 0.00 3.71
3600 4791 6.446318 TGCAAACCAAATACATGAAACTCTC 58.554 36.000 0.00 0.00 0.00 3.20
3601 4792 6.040842 ACTGCAAACCAAATACATGAAACTCT 59.959 34.615 0.00 0.00 0.00 3.24
3602 4793 6.215845 ACTGCAAACCAAATACATGAAACTC 58.784 36.000 0.00 0.00 0.00 3.01
3603 4794 6.160576 ACTGCAAACCAAATACATGAAACT 57.839 33.333 0.00 0.00 0.00 2.66
3604 4795 7.938563 TTACTGCAAACCAAATACATGAAAC 57.061 32.000 0.00 0.00 0.00 2.78
3605 4796 8.417106 TCTTTACTGCAAACCAAATACATGAAA 58.583 29.630 0.00 0.00 0.00 2.69
3606 4797 7.946207 TCTTTACTGCAAACCAAATACATGAA 58.054 30.769 0.00 0.00 0.00 2.57
3614 4805 7.334858 AGGAAAATTCTTTACTGCAAACCAAA 58.665 30.769 0.00 0.00 34.17 3.28
3627 4818 4.587262 ACCCTGCGTAAAGGAAAATTCTTT 59.413 37.500 2.88 0.00 40.02 2.52
3628 4819 4.022329 CACCCTGCGTAAAGGAAAATTCTT 60.022 41.667 2.88 0.00 40.02 2.52
3632 4823 2.871453 ACACCCTGCGTAAAGGAAAAT 58.129 42.857 2.88 0.00 40.02 1.82
3638 4829 2.218603 ACAAGAACACCCTGCGTAAAG 58.781 47.619 0.00 0.00 0.00 1.85
3641 4832 1.965643 ACTACAAGAACACCCTGCGTA 59.034 47.619 0.00 0.00 0.00 4.42
3642 4833 0.756903 ACTACAAGAACACCCTGCGT 59.243 50.000 0.00 0.00 0.00 5.24
3643 4834 1.878953 AACTACAAGAACACCCTGCG 58.121 50.000 0.00 0.00 0.00 5.18
3655 4860 8.882415 AGTTCTCTTTCGTTATGAAACTACAA 57.118 30.769 0.00 0.00 41.59 2.41
3658 4863 9.415544 GGTTAGTTCTCTTTCGTTATGAAACTA 57.584 33.333 0.00 0.00 41.59 2.24
3659 4864 8.148999 AGGTTAGTTCTCTTTCGTTATGAAACT 58.851 33.333 0.00 0.00 41.59 2.66
3660 4865 8.307921 AGGTTAGTTCTCTTTCGTTATGAAAC 57.692 34.615 0.00 0.00 41.59 2.78
3670 4875 9.085250 CCTTATACGAAAGGTTAGTTCTCTTTC 57.915 37.037 0.00 0.00 41.06 2.62
3680 4885 6.762661 CCCGATTTTCCTTATACGAAAGGTTA 59.237 38.462 13.14 3.90 45.37 2.85
3685 4890 7.111247 TCTACCCGATTTTCCTTATACGAAA 57.889 36.000 0.00 0.00 0.00 3.46
3689 4894 9.557061 AGATTTTCTACCCGATTTTCCTTATAC 57.443 33.333 0.00 0.00 0.00 1.47
3694 4899 6.062258 TCAGATTTTCTACCCGATTTTCCT 57.938 37.500 0.00 0.00 0.00 3.36
3695 4900 5.220873 GCTCAGATTTTCTACCCGATTTTCC 60.221 44.000 0.00 0.00 0.00 3.13
3696 4901 5.220873 GGCTCAGATTTTCTACCCGATTTTC 60.221 44.000 0.00 0.00 0.00 2.29
3697 4902 4.640647 GGCTCAGATTTTCTACCCGATTTT 59.359 41.667 0.00 0.00 0.00 1.82
3722 4962 2.105477 TCTAGATGCTGCCAGGAATTCC 59.895 50.000 17.31 17.31 0.00 3.01
3723 4963 3.137533 GTCTAGATGCTGCCAGGAATTC 58.862 50.000 0.00 0.00 0.00 2.17
3726 4966 1.571955 TGTCTAGATGCTGCCAGGAA 58.428 50.000 0.00 0.00 0.00 3.36
3727 4967 1.571955 TTGTCTAGATGCTGCCAGGA 58.428 50.000 0.00 0.00 0.00 3.86
3728 4968 2.012673 GTTTGTCTAGATGCTGCCAGG 58.987 52.381 0.00 0.00 0.00 4.45
3729 4969 2.676839 CAGTTTGTCTAGATGCTGCCAG 59.323 50.000 0.00 0.00 0.00 4.85
3730 4970 2.038952 ACAGTTTGTCTAGATGCTGCCA 59.961 45.455 0.00 0.00 0.00 4.92
3731 4971 2.417933 CACAGTTTGTCTAGATGCTGCC 59.582 50.000 0.00 0.00 0.00 4.85
3732 4972 3.329386 TCACAGTTTGTCTAGATGCTGC 58.671 45.455 0.00 0.00 0.00 5.25
3750 4990 1.601903 TCATTGTGCCGTGTTCTTCAC 59.398 47.619 0.00 0.00 43.03 3.18
3753 4993 1.603802 CTGTCATTGTGCCGTGTTCTT 59.396 47.619 0.00 0.00 0.00 2.52
3754 4994 1.202639 TCTGTCATTGTGCCGTGTTCT 60.203 47.619 0.00 0.00 0.00 3.01
3755 4995 1.069906 GTCTGTCATTGTGCCGTGTTC 60.070 52.381 0.00 0.00 0.00 3.18
3756 4996 0.944386 GTCTGTCATTGTGCCGTGTT 59.056 50.000 0.00 0.00 0.00 3.32
3757 4997 0.884704 GGTCTGTCATTGTGCCGTGT 60.885 55.000 0.00 0.00 0.00 4.49
3758 4998 1.577328 GGGTCTGTCATTGTGCCGTG 61.577 60.000 0.00 0.00 0.00 4.94
3760 5000 2.040544 GGGGTCTGTCATTGTGCCG 61.041 63.158 0.00 0.00 0.00 5.69
3761 5001 1.678970 GGGGGTCTGTCATTGTGCC 60.679 63.158 0.00 0.00 0.00 5.01
3762 5002 0.962356 CAGGGGGTCTGTCATTGTGC 60.962 60.000 0.00 0.00 38.64 4.57
3763 5003 0.962356 GCAGGGGGTCTGTCATTGTG 60.962 60.000 0.00 0.00 45.08 3.33
3764 5004 1.380302 GCAGGGGGTCTGTCATTGT 59.620 57.895 0.00 0.00 45.08 2.71
3766 5006 3.090765 GGCAGGGGGTCTGTCATT 58.909 61.111 0.00 0.00 46.81 2.57
3769 5009 4.083862 GTCGGCAGGGGGTCTGTC 62.084 72.222 0.00 0.00 45.08 3.51
3776 6471 4.722700 CAACTGGGTCGGCAGGGG 62.723 72.222 0.00 0.00 0.00 4.79
3778 6473 2.046892 CTCAACTGGGTCGGCAGG 60.047 66.667 0.00 0.00 0.00 4.85
3779 6474 2.046892 CCTCAACTGGGTCGGCAG 60.047 66.667 0.00 0.00 0.00 4.85
3781 6476 2.047179 GACCTCAACTGGGTCGGC 60.047 66.667 0.00 0.00 42.84 5.54
3791 6486 7.719193 TGATTTATCTGAGTTTTGTGACCTCAA 59.281 33.333 0.00 0.00 0.00 3.02
3792 6487 7.223584 TGATTTATCTGAGTTTTGTGACCTCA 58.776 34.615 0.00 0.00 0.00 3.86
3793 6488 7.672983 TGATTTATCTGAGTTTTGTGACCTC 57.327 36.000 0.00 0.00 0.00 3.85
3797 6492 8.675705 TGACTTGATTTATCTGAGTTTTGTGA 57.324 30.769 0.00 0.00 0.00 3.58
3805 6500 8.637099 TCTACTCCATGACTTGATTTATCTGAG 58.363 37.037 0.00 0.00 0.00 3.35
3806 6501 8.539117 TCTACTCCATGACTTGATTTATCTGA 57.461 34.615 0.00 0.00 0.00 3.27
3807 6502 9.775854 AATCTACTCCATGACTTGATTTATCTG 57.224 33.333 0.00 0.00 0.00 2.90
3811 6506 9.832445 GGTAAATCTACTCCATGACTTGATTTA 57.168 33.333 0.00 5.69 35.30 1.40
3812 6507 8.552296 AGGTAAATCTACTCCATGACTTGATTT 58.448 33.333 0.00 6.59 36.82 2.17
3814 6509 7.504403 CAGGTAAATCTACTCCATGACTTGAT 58.496 38.462 0.00 0.00 0.00 2.57
3815 6510 6.630413 GCAGGTAAATCTACTCCATGACTTGA 60.630 42.308 0.00 0.00 0.00 3.02
3816 6511 5.525378 GCAGGTAAATCTACTCCATGACTTG 59.475 44.000 0.00 0.00 0.00 3.16
3821 6694 6.319658 ACATTTGCAGGTAAATCTACTCCATG 59.680 38.462 0.00 0.00 0.00 3.66
3835 6708 0.179004 TCCGTGGAACATTTGCAGGT 60.179 50.000 0.00 0.00 44.52 4.00
3836 6709 0.523072 CTCCGTGGAACATTTGCAGG 59.477 55.000 0.00 0.00 44.52 4.85
3848 6721 8.361139 ACTTGTTAGAGATATTATTCTCCGTGG 58.639 37.037 0.00 0.00 42.63 4.94
3849 6722 9.751542 AACTTGTTAGAGATATTATTCTCCGTG 57.248 33.333 0.00 0.00 42.63 4.94
3881 6754 7.093354 TCCGTTCATCAGAGATCTTATTATGC 58.907 38.462 0.00 0.00 0.00 3.14
3882 6755 9.138062 CTTCCGTTCATCAGAGATCTTATTATG 57.862 37.037 0.00 0.00 0.00 1.90
3923 6796 1.004440 ACTTCCGTTCAGCAGAGCC 60.004 57.895 0.00 0.00 0.00 4.70
3924 6797 1.905922 GCACTTCCGTTCAGCAGAGC 61.906 60.000 0.00 0.00 0.00 4.09
3925 6798 1.621301 CGCACTTCCGTTCAGCAGAG 61.621 60.000 0.00 0.00 0.00 3.35
3926 6799 1.664649 CGCACTTCCGTTCAGCAGA 60.665 57.895 0.00 0.00 0.00 4.26
3927 6800 1.221466 TTCGCACTTCCGTTCAGCAG 61.221 55.000 0.00 0.00 0.00 4.24
3928 6801 0.812014 TTTCGCACTTCCGTTCAGCA 60.812 50.000 0.00 0.00 0.00 4.41
3929 6802 0.517316 ATTTCGCACTTCCGTTCAGC 59.483 50.000 0.00 0.00 0.00 4.26
3930 6803 1.725931 GCATTTCGCACTTCCGTTCAG 60.726 52.381 0.00 0.00 41.79 3.02
3931 6804 0.237235 GCATTTCGCACTTCCGTTCA 59.763 50.000 0.00 0.00 41.79 3.18
3932 6805 3.001576 GCATTTCGCACTTCCGTTC 57.998 52.632 0.00 0.00 41.79 3.95
3949 6822 1.153208 AGTGGCTGCTGCTATCTGC 60.153 57.895 15.64 0.00 43.25 4.26
3950 6823 0.532417 GGAGTGGCTGCTGCTATCTG 60.532 60.000 15.64 0.00 39.59 2.90
3951 6824 0.979709 TGGAGTGGCTGCTGCTATCT 60.980 55.000 15.64 9.26 39.59 1.98
3952 6825 0.108207 ATGGAGTGGCTGCTGCTATC 59.892 55.000 15.64 10.39 39.59 2.08
3953 6826 1.347050 CTATGGAGTGGCTGCTGCTAT 59.653 52.381 15.64 1.60 39.59 2.97
3954 6827 0.755079 CTATGGAGTGGCTGCTGCTA 59.245 55.000 15.64 6.53 39.59 3.49
3959 6832 1.210478 TCTTTCCTATGGAGTGGCTGC 59.790 52.381 0.00 0.00 31.21 5.25
3963 6836 7.713073 GTCTAAGATTTCTTTCCTATGGAGTGG 59.287 40.741 0.00 0.00 37.40 4.00
3966 6839 9.270640 CATGTCTAAGATTTCTTTCCTATGGAG 57.729 37.037 0.00 0.00 37.40 3.86
3972 6845 7.951347 AATGCATGTCTAAGATTTCTTTCCT 57.049 32.000 0.00 0.00 37.40 3.36
3975 6848 7.965107 GTCGAAATGCATGTCTAAGATTTCTTT 59.035 33.333 14.94 0.00 37.40 2.52
3980 6853 4.271049 CGGTCGAAATGCATGTCTAAGATT 59.729 41.667 14.94 0.00 0.00 2.40
3993 6881 3.550992 CGCCCGACGGTCGAAATG 61.551 66.667 30.33 16.34 43.74 2.32
4035 6941 3.687321 ATCGTGCCGCTCCATGCTT 62.687 57.895 0.00 0.00 40.11 3.91
4039 6945 2.107750 CTCATCGTGCCGCTCCAT 59.892 61.111 0.00 0.00 0.00 3.41
4059 6965 4.135153 CAGACCTCGACCTGGCGG 62.135 72.222 9.91 1.39 0.00 6.13
4061 6967 3.775654 CCCAGACCTCGACCTGGC 61.776 72.222 14.95 0.00 46.52 4.85
4064 6970 2.283966 CCACCCAGACCTCGACCT 60.284 66.667 0.00 0.00 0.00 3.85
4091 6997 2.125512 GGACATGAAGCGAGCCGT 60.126 61.111 0.00 0.00 0.00 5.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.