Multiple sequence alignment - TraesCS7D01G139700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G139700 chr7D 100.000 3268 0 0 1 3268 89473009 89476276 0.000000e+00 6035.0
1 TraesCS7D01G139700 chr7D 79.833 1433 184 63 801 2152 89280401 89281809 0.000000e+00 948.0
2 TraesCS7D01G139700 chr7D 81.233 1119 193 15 624 1737 89274378 89275484 0.000000e+00 887.0
3 TraesCS7D01G139700 chr7D 98.667 300 4 0 240 539 593785441 593785740 1.730000e-147 532.0
4 TraesCS7D01G139700 chr7D 78.808 151 20 4 455 598 89278773 89278918 1.250000e-14 91.6
5 TraesCS7D01G139700 chr7A 96.734 643 15 3 2632 3268 90504162 90504804 0.000000e+00 1066.0
6 TraesCS7D01G139700 chr7A 81.745 1123 175 19 624 1737 90454087 90455188 0.000000e+00 911.0
7 TraesCS7D01G139700 chr7A 83.806 741 91 15 483 1208 90487160 90487886 0.000000e+00 676.0
8 TraesCS7D01G139700 chr7A 83.378 740 69 27 1354 2082 90487900 90488596 1.280000e-178 636.0
9 TraesCS7D01G139700 chr7A 85.000 80 9 2 2320 2397 90488966 90489044 9.720000e-11 78.7
10 TraesCS7D01G139700 chr7B 96.573 642 18 2 2630 3268 40297726 40298366 0.000000e+00 1061.0
11 TraesCS7D01G139700 chr7B 81.689 1125 179 20 624 1737 40181312 40182420 0.000000e+00 911.0
12 TraesCS7D01G139700 chr7B 83.458 804 98 19 510 1292 40292838 40293627 0.000000e+00 715.0
13 TraesCS7D01G139700 chr7B 83.211 679 67 12 1408 2080 40294824 40295461 2.190000e-161 579.0
14 TraesCS7D01G139700 chr7B 77.672 421 69 20 1954 2362 40295406 40295813 1.960000e-57 233.0
15 TraesCS7D01G139700 chr5A 83.843 1046 138 15 595 1616 666944560 666943522 0.000000e+00 966.0
16 TraesCS7D01G139700 chr5A 82.609 92 8 2 488 576 666944698 666944612 1.260000e-09 75.0
17 TraesCS7D01G139700 chrUn 83.927 1039 136 16 602 1616 30432966 30431935 0.000000e+00 965.0
18 TraesCS7D01G139700 chrUn 80.537 596 101 13 1151 1737 30439653 30439064 8.320000e-121 444.0
19 TraesCS7D01G139700 chrUn 81.551 477 84 2 624 1100 30440545 30440073 1.100000e-104 390.0
20 TraesCS7D01G139700 chrUn 80.172 116 12 3 488 597 30433111 30433001 3.500000e-10 76.8
21 TraesCS7D01G139700 chr3D 87.255 306 31 4 2846 3149 19058161 19057862 3.120000e-90 342.0
22 TraesCS7D01G139700 chr3D 87.063 286 34 2 1452 1737 103678438 103678720 1.460000e-83 320.0
23 TraesCS7D01G139700 chr6B 86.971 307 29 9 2846 3149 682908334 682908632 5.220000e-88 335.0
24 TraesCS7D01G139700 chr2B 84.429 289 39 5 1452 1737 711159392 711159677 2.480000e-71 279.0
25 TraesCS7D01G139700 chr2B 86.275 204 25 2 1489 1692 195927338 195927138 5.490000e-53 219.0
26 TraesCS7D01G139700 chr4A 78.289 152 26 7 243 389 548783818 548783967 1.250000e-14 91.6
27 TraesCS7D01G139700 chr4B 86.667 75 8 2 311 384 78482946 78483019 7.520000e-12 82.4
28 TraesCS7D01G139700 chr4B 78.195 133 23 6 243 372 71341553 71341424 2.700000e-11 80.5
29 TraesCS7D01G139700 chr4D 76.692 133 26 5 243 372 48595330 48595200 5.850000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G139700 chr7D 89473009 89476276 3267 False 6035.000000 6035 100.000000 1 3268 1 chr7D.!!$F1 3267
1 TraesCS7D01G139700 chr7D 89274378 89281809 7431 False 642.200000 948 79.958000 455 2152 3 chr7D.!!$F3 1697
2 TraesCS7D01G139700 chr7A 90504162 90504804 642 False 1066.000000 1066 96.734000 2632 3268 1 chr7A.!!$F2 636
3 TraesCS7D01G139700 chr7A 90454087 90455188 1101 False 911.000000 911 81.745000 624 1737 1 chr7A.!!$F1 1113
4 TraesCS7D01G139700 chr7A 90487160 90489044 1884 False 463.566667 676 84.061333 483 2397 3 chr7A.!!$F3 1914
5 TraesCS7D01G139700 chr7B 40181312 40182420 1108 False 911.000000 911 81.689000 624 1737 1 chr7B.!!$F1 1113
6 TraesCS7D01G139700 chr7B 40292838 40298366 5528 False 647.000000 1061 85.228500 510 3268 4 chr7B.!!$F2 2758
7 TraesCS7D01G139700 chr5A 666943522 666944698 1176 True 520.500000 966 83.226000 488 1616 2 chr5A.!!$R1 1128
8 TraesCS7D01G139700 chrUn 30431935 30433111 1176 True 520.900000 965 82.049500 488 1616 2 chrUn.!!$R1 1128
9 TraesCS7D01G139700 chrUn 30439064 30440545 1481 True 417.000000 444 81.044000 624 1737 2 chrUn.!!$R2 1113

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
133 134 0.250553 CACCCAACTCCACCGCTTAA 60.251 55.0 0.0 0.0 0.00 1.85 F
1052 6289 0.037697 GCAAAATCCGGGGTTGGAAC 60.038 55.0 0.0 0.0 42.46 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1185 6791 0.036952 AACTCCCTCGAGCACACATG 60.037 55.0 6.99 0.0 40.03 3.21 R
2402 9608 0.884704 ACACGGCACAATGACAGACC 60.885 55.0 0.00 0.0 0.00 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.404671 GTAGCCTTGAATAATTTTGGAAGGA 57.595 36.000 0.00 0.00 33.17 3.36
26 27 7.315066 AGCCTTGAATAATTTTGGAAGGAAA 57.685 32.000 0.00 0.00 33.17 3.13
27 28 7.744733 AGCCTTGAATAATTTTGGAAGGAAAA 58.255 30.769 0.00 0.00 33.17 2.29
28 29 8.385491 AGCCTTGAATAATTTTGGAAGGAAAAT 58.615 29.630 0.00 0.00 37.16 1.82
29 30 8.453320 GCCTTGAATAATTTTGGAAGGAAAATG 58.547 33.333 0.00 0.00 36.01 2.32
30 31 9.506018 CCTTGAATAATTTTGGAAGGAAAATGT 57.494 29.630 0.00 0.00 36.01 2.71
40 41 5.606505 TGGAAGGAAAATGTTTTTAGGTGC 58.393 37.500 0.00 0.00 0.00 5.01
41 42 4.994852 GGAAGGAAAATGTTTTTAGGTGCC 59.005 41.667 0.00 0.00 0.00 5.01
42 43 5.221641 GGAAGGAAAATGTTTTTAGGTGCCT 60.222 40.000 0.00 0.00 0.00 4.75
43 44 5.887214 AGGAAAATGTTTTTAGGTGCCTT 57.113 34.783 0.00 0.00 0.00 4.35
44 45 6.987403 AGGAAAATGTTTTTAGGTGCCTTA 57.013 33.333 0.00 0.00 0.00 2.69
46 47 6.325286 AGGAAAATGTTTTTAGGTGCCTTACA 59.675 34.615 0.00 0.00 0.00 2.41
48 49 7.659799 GGAAAATGTTTTTAGGTGCCTTACATT 59.340 33.333 0.00 5.69 0.00 2.71
49 50 9.699703 GAAAATGTTTTTAGGTGCCTTACATTA 57.300 29.630 14.79 0.00 0.00 1.90
54 55 6.902771 TTTTAGGTGCCTTACATTAGCAAA 57.097 33.333 0.00 0.00 38.45 3.68
55 56 7.475137 TTTTAGGTGCCTTACATTAGCAAAT 57.525 32.000 0.00 0.00 38.45 2.32
56 57 7.475137 TTTAGGTGCCTTACATTAGCAAATT 57.525 32.000 0.00 0.00 38.45 1.82
57 58 8.582657 TTTAGGTGCCTTACATTAGCAAATTA 57.417 30.769 0.00 0.00 38.45 1.40
58 59 8.582657 TTAGGTGCCTTACATTAGCAAATTAA 57.417 30.769 0.00 0.00 38.45 1.40
60 61 7.547227 AGGTGCCTTACATTAGCAAATTAAAG 58.453 34.615 0.00 0.00 38.45 1.85
62 63 7.275560 GGTGCCTTACATTAGCAAATTAAAGTG 59.724 37.037 0.00 0.00 38.45 3.16
63 64 8.026607 GTGCCTTACATTAGCAAATTAAAGTGA 58.973 33.333 0.00 0.00 38.45 3.41
64 65 8.748412 TGCCTTACATTAGCAAATTAAAGTGAT 58.252 29.630 0.00 0.00 32.56 3.06
98 99 9.865484 GATAAACTTCTATATTTCGTCCTTTGC 57.135 33.333 0.00 0.00 0.00 3.68
100 101 5.741011 ACTTCTATATTTCGTCCTTTGCCA 58.259 37.500 0.00 0.00 0.00 4.92
101 102 6.357367 ACTTCTATATTTCGTCCTTTGCCAT 58.643 36.000 0.00 0.00 0.00 4.40
104 105 6.591935 TCTATATTTCGTCCTTTGCCATCTT 58.408 36.000 0.00 0.00 0.00 2.40
105 106 3.855689 ATTTCGTCCTTTGCCATCTTG 57.144 42.857 0.00 0.00 0.00 3.02
107 108 3.410631 TTCGTCCTTTGCCATCTTGTA 57.589 42.857 0.00 0.00 0.00 2.41
108 109 3.410631 TCGTCCTTTGCCATCTTGTAA 57.589 42.857 0.00 0.00 0.00 2.41
109 110 3.745799 TCGTCCTTTGCCATCTTGTAAA 58.254 40.909 0.00 0.00 0.00 2.01
110 111 4.331968 TCGTCCTTTGCCATCTTGTAAAT 58.668 39.130 0.00 0.00 0.00 1.40
113 114 5.106157 CGTCCTTTGCCATCTTGTAAATCTT 60.106 40.000 0.00 0.00 0.00 2.40
117 118 5.643379 TTGCCATCTTGTAAATCTTCACC 57.357 39.130 0.00 0.00 0.00 4.02
119 120 4.016444 GCCATCTTGTAAATCTTCACCCA 58.984 43.478 0.00 0.00 0.00 4.51
120 121 4.462483 GCCATCTTGTAAATCTTCACCCAA 59.538 41.667 0.00 0.00 0.00 4.12
122 123 5.711976 CCATCTTGTAAATCTTCACCCAACT 59.288 40.000 0.00 0.00 0.00 3.16
123 124 6.127897 CCATCTTGTAAATCTTCACCCAACTC 60.128 42.308 0.00 0.00 0.00 3.01
125 126 4.715534 TGTAAATCTTCACCCAACTCCA 57.284 40.909 0.00 0.00 0.00 3.86
126 127 4.394729 TGTAAATCTTCACCCAACTCCAC 58.605 43.478 0.00 0.00 0.00 4.02
127 128 2.586648 AATCTTCACCCAACTCCACC 57.413 50.000 0.00 0.00 0.00 4.61
129 130 1.966451 CTTCACCCAACTCCACCGC 60.966 63.158 0.00 0.00 0.00 5.68
131 132 1.990160 TTCACCCAACTCCACCGCTT 61.990 55.000 0.00 0.00 0.00 4.68
132 133 1.122632 TCACCCAACTCCACCGCTTA 61.123 55.000 0.00 0.00 0.00 3.09
133 134 0.250553 CACCCAACTCCACCGCTTAA 60.251 55.000 0.00 0.00 0.00 1.85
134 135 0.475044 ACCCAACTCCACCGCTTAAA 59.525 50.000 0.00 0.00 0.00 1.52
135 136 1.133730 ACCCAACTCCACCGCTTAAAA 60.134 47.619 0.00 0.00 0.00 1.52
137 138 2.163613 CCCAACTCCACCGCTTAAAATC 59.836 50.000 0.00 0.00 0.00 2.17
138 139 3.081804 CCAACTCCACCGCTTAAAATCT 58.918 45.455 0.00 0.00 0.00 2.40
139 140 4.258543 CCAACTCCACCGCTTAAAATCTA 58.741 43.478 0.00 0.00 0.00 1.98
140 141 4.332819 CCAACTCCACCGCTTAAAATCTAG 59.667 45.833 0.00 0.00 0.00 2.43
143 144 3.869065 TCCACCGCTTAAAATCTAGGTG 58.131 45.455 5.53 5.53 46.16 4.00
147 148 4.369182 ACCGCTTAAAATCTAGGTGATCG 58.631 43.478 0.00 0.00 33.57 3.69
148 149 3.184581 CCGCTTAAAATCTAGGTGATCGC 59.815 47.826 0.00 0.00 33.57 4.58
151 152 4.811557 GCTTAAAATCTAGGTGATCGCACT 59.188 41.667 8.82 5.62 44.52 4.40
152 153 5.294552 GCTTAAAATCTAGGTGATCGCACTT 59.705 40.000 8.82 0.00 44.52 3.16
154 155 2.898729 ATCTAGGTGATCGCACTTGG 57.101 50.000 8.82 0.00 44.52 3.61
156 157 2.730382 TCTAGGTGATCGCACTTGGTA 58.270 47.619 8.82 0.00 44.52 3.25
157 158 3.093814 TCTAGGTGATCGCACTTGGTAA 58.906 45.455 8.82 0.00 44.52 2.85
159 160 3.350219 AGGTGATCGCACTTGGTAAAT 57.650 42.857 8.82 0.00 44.52 1.40
160 161 4.481368 AGGTGATCGCACTTGGTAAATA 57.519 40.909 8.82 0.00 44.52 1.40
161 162 4.839121 AGGTGATCGCACTTGGTAAATAA 58.161 39.130 8.82 0.00 44.52 1.40
162 163 5.250200 AGGTGATCGCACTTGGTAAATAAA 58.750 37.500 8.82 0.00 44.52 1.40
163 164 5.708230 AGGTGATCGCACTTGGTAAATAAAA 59.292 36.000 8.82 0.00 44.52 1.52
164 165 5.798434 GGTGATCGCACTTGGTAAATAAAAC 59.202 40.000 8.82 0.00 44.52 2.43
165 166 6.349033 GGTGATCGCACTTGGTAAATAAAACT 60.349 38.462 8.82 0.00 44.52 2.66
167 168 7.691050 GTGATCGCACTTGGTAAATAAAACTAC 59.309 37.037 0.16 0.00 41.84 2.73
170 171 5.390145 CGCACTTGGTAAATAAAACTACGCT 60.390 40.000 0.00 0.00 0.00 5.07
172 173 6.347888 GCACTTGGTAAATAAAACTACGCTCA 60.348 38.462 0.00 0.00 0.00 4.26
173 174 7.577979 CACTTGGTAAATAAAACTACGCTCAA 58.422 34.615 0.00 0.00 0.00 3.02
174 175 8.071368 CACTTGGTAAATAAAACTACGCTCAAA 58.929 33.333 0.00 0.00 0.00 2.69
175 176 8.623030 ACTTGGTAAATAAAACTACGCTCAAAA 58.377 29.630 0.00 0.00 0.00 2.44
176 177 9.113876 CTTGGTAAATAAAACTACGCTCAAAAG 57.886 33.333 0.00 0.00 0.00 2.27
186 187 1.654220 GCTCAAAAGCGAAGGCACA 59.346 52.632 0.00 0.00 43.41 4.57
188 189 1.468520 GCTCAAAAGCGAAGGCACATA 59.531 47.619 0.00 0.00 43.41 2.29
189 190 2.476854 GCTCAAAAGCGAAGGCACATAG 60.477 50.000 0.00 0.00 43.41 2.23
191 192 2.483877 TCAAAAGCGAAGGCACATAGTG 59.516 45.455 0.00 0.00 43.41 2.74
192 193 2.185004 AAAGCGAAGGCACATAGTGT 57.815 45.000 0.00 0.00 43.41 3.55
209 210 8.319143 ACATAGTGTGTGGTTAATTTGTACTC 57.681 34.615 0.00 0.00 40.28 2.59
210 211 7.934665 ACATAGTGTGTGGTTAATTTGTACTCA 59.065 33.333 0.00 0.00 40.28 3.41
211 212 8.779303 CATAGTGTGTGGTTAATTTGTACTCAA 58.221 33.333 0.00 0.00 0.00 3.02
212 213 7.633193 AGTGTGTGGTTAATTTGTACTCAAA 57.367 32.000 0.00 0.00 45.71 2.69
252 253 4.774726 TGGCTAGCCAATAATTTTGGTTGA 59.225 37.500 34.27 4.42 44.12 3.18
255 256 5.394553 GCTAGCCAATAATTTTGGTTGAGCT 60.395 40.000 2.29 15.32 41.53 4.09
256 257 5.488262 AGCCAATAATTTTGGTTGAGCTT 57.512 34.783 16.01 0.00 41.53 3.74
258 259 6.298361 AGCCAATAATTTTGGTTGAGCTTTT 58.702 32.000 16.01 0.00 41.53 2.27
261 262 6.205270 CCAATAATTTTGGTTGAGCTTTTGCT 59.795 34.615 9.82 0.00 45.69 3.91
262 263 7.255208 CCAATAATTTTGGTTGAGCTTTTGCTT 60.255 33.333 9.82 0.00 44.31 3.91
274 275 4.503741 GCTTTTGCTTACCATGAGTTGA 57.496 40.909 0.00 0.00 43.35 3.18
276 277 6.194796 GCTTTTGCTTACCATGAGTTGATA 57.805 37.500 0.00 0.00 43.35 2.15
277 278 6.620678 GCTTTTGCTTACCATGAGTTGATAA 58.379 36.000 0.00 0.00 43.35 1.75
278 279 7.090173 GCTTTTGCTTACCATGAGTTGATAAA 58.910 34.615 0.00 0.00 43.35 1.40
279 280 7.598493 GCTTTTGCTTACCATGAGTTGATAAAA 59.402 33.333 0.00 0.00 43.35 1.52
280 281 9.474920 CTTTTGCTTACCATGAGTTGATAAAAA 57.525 29.630 0.00 0.00 0.00 1.94
305 306 6.783892 TGGCATGAAAAATAAAAGAGTTGC 57.216 33.333 0.00 0.00 0.00 4.17
307 308 5.700373 GGCATGAAAAATAAAAGAGTTGCCA 59.300 36.000 0.00 0.00 44.06 4.92
308 309 6.204495 GGCATGAAAAATAAAAGAGTTGCCAA 59.796 34.615 0.00 0.00 44.06 4.52
309 310 7.255070 GGCATGAAAAATAAAAGAGTTGCCAAA 60.255 33.333 0.00 0.00 44.06 3.28
311 312 7.784633 TGAAAAATAAAAGAGTTGCCAAAGG 57.215 32.000 0.00 0.00 0.00 3.11
312 313 7.560368 TGAAAAATAAAAGAGTTGCCAAAGGA 58.440 30.769 0.00 0.00 0.00 3.36
313 314 7.710475 TGAAAAATAAAAGAGTTGCCAAAGGAG 59.290 33.333 0.00 0.00 0.00 3.69
314 315 4.790765 ATAAAAGAGTTGCCAAAGGAGC 57.209 40.909 0.00 0.00 0.00 4.70
315 316 2.071778 AAAGAGTTGCCAAAGGAGCA 57.928 45.000 0.00 0.00 38.81 4.26
316 317 2.299326 AAGAGTTGCCAAAGGAGCAT 57.701 45.000 0.00 0.00 40.59 3.79
317 318 1.831580 AGAGTTGCCAAAGGAGCATC 58.168 50.000 0.00 0.00 40.59 3.91
318 319 1.074405 AGAGTTGCCAAAGGAGCATCA 59.926 47.619 0.00 0.00 40.59 3.07
319 320 1.888512 GAGTTGCCAAAGGAGCATCAA 59.111 47.619 0.00 0.00 40.59 2.57
320 321 1.615392 AGTTGCCAAAGGAGCATCAAC 59.385 47.619 0.00 0.00 40.59 3.18
321 322 1.340889 GTTGCCAAAGGAGCATCAACA 59.659 47.619 0.00 0.00 40.59 3.33
323 324 1.546923 TGCCAAAGGAGCATCAACATG 59.453 47.619 0.00 0.00 36.25 3.21
338 339 5.321959 TCAACATGCAAAAGAAACTGTCA 57.678 34.783 0.00 0.00 0.00 3.58
339 340 5.718146 TCAACATGCAAAAGAAACTGTCAA 58.282 33.333 0.00 0.00 0.00 3.18
341 342 6.476380 TCAACATGCAAAAGAAACTGTCAATC 59.524 34.615 0.00 0.00 0.00 2.67
342 343 5.904941 ACATGCAAAAGAAACTGTCAATCA 58.095 33.333 0.00 0.00 0.00 2.57
343 344 6.518493 ACATGCAAAAGAAACTGTCAATCAT 58.482 32.000 0.00 0.00 0.00 2.45
345 346 5.531634 TGCAAAAGAAACTGTCAATCATCC 58.468 37.500 0.00 0.00 0.00 3.51
346 347 5.068855 TGCAAAAGAAACTGTCAATCATCCA 59.931 36.000 0.00 0.00 0.00 3.41
347 348 5.984926 GCAAAAGAAACTGTCAATCATCCAA 59.015 36.000 0.00 0.00 0.00 3.53
348 349 6.479660 GCAAAAGAAACTGTCAATCATCCAAA 59.520 34.615 0.00 0.00 0.00 3.28
351 352 6.713762 AGAAACTGTCAATCATCCAAACAA 57.286 33.333 0.00 0.00 0.00 2.83
352 353 7.111247 AGAAACTGTCAATCATCCAAACAAA 57.889 32.000 0.00 0.00 0.00 2.83
354 355 6.713762 AACTGTCAATCATCCAAACAAAGA 57.286 33.333 0.00 0.00 0.00 2.52
355 356 6.076981 ACTGTCAATCATCCAAACAAAGAC 57.923 37.500 0.00 0.00 0.00 3.01
356 357 5.010012 ACTGTCAATCATCCAAACAAAGACC 59.990 40.000 0.00 0.00 0.00 3.85
357 358 4.892345 TGTCAATCATCCAAACAAAGACCA 59.108 37.500 0.00 0.00 0.00 4.02
358 359 5.362143 TGTCAATCATCCAAACAAAGACCAA 59.638 36.000 0.00 0.00 0.00 3.67
359 360 6.041865 TGTCAATCATCCAAACAAAGACCAAT 59.958 34.615 0.00 0.00 0.00 3.16
360 361 6.366877 GTCAATCATCCAAACAAAGACCAATG 59.633 38.462 0.00 0.00 0.00 2.82
361 362 6.041865 TCAATCATCCAAACAAAGACCAATGT 59.958 34.615 0.00 0.00 0.00 2.71
362 363 5.867903 TCATCCAAACAAAGACCAATGTT 57.132 34.783 0.00 0.00 41.31 2.71
364 365 6.648192 TCATCCAAACAAAGACCAATGTTTT 58.352 32.000 1.44 0.00 44.91 2.43
365 366 6.538021 TCATCCAAACAAAGACCAATGTTTTG 59.462 34.615 1.44 0.00 44.91 2.44
373 374 2.857254 CCAATGTTTTGGCCATGGC 58.143 52.632 29.47 29.47 45.71 4.40
374 375 0.325602 CCAATGTTTTGGCCATGGCT 59.674 50.000 34.70 11.86 45.71 4.75
375 376 1.554160 CCAATGTTTTGGCCATGGCTA 59.446 47.619 34.70 28.21 45.71 3.93
376 377 2.027377 CCAATGTTTTGGCCATGGCTAA 60.027 45.455 34.70 32.20 45.71 3.09
383 384 3.347077 TTGGCCATGGCTAAAAATTGG 57.653 42.857 34.70 0.00 38.61 3.16
384 385 2.264455 TGGCCATGGCTAAAAATTGGT 58.736 42.857 34.70 0.00 41.60 3.67
385 386 2.641815 TGGCCATGGCTAAAAATTGGTT 59.358 40.909 34.70 0.00 41.60 3.67
387 388 3.009026 GCCATGGCTAAAAATTGGTTGG 58.991 45.455 29.98 0.00 38.26 3.77
388 389 3.608796 CCATGGCTAAAAATTGGTTGGG 58.391 45.455 0.00 0.00 0.00 4.12
391 392 2.370189 TGGCTAAAAATTGGTTGGGTGG 59.630 45.455 0.00 0.00 0.00 4.61
393 394 3.398406 GCTAAAAATTGGTTGGGTGGTG 58.602 45.455 0.00 0.00 0.00 4.17
394 395 3.805457 GCTAAAAATTGGTTGGGTGGTGG 60.805 47.826 0.00 0.00 0.00 4.61
395 396 0.472044 AAAATTGGTTGGGTGGTGGC 59.528 50.000 0.00 0.00 0.00 5.01
396 397 0.692419 AAATTGGTTGGGTGGTGGCA 60.692 50.000 0.00 0.00 0.00 4.92
397 398 0.692419 AATTGGTTGGGTGGTGGCAA 60.692 50.000 0.00 0.00 0.00 4.52
398 399 0.473501 ATTGGTTGGGTGGTGGCAAT 60.474 50.000 0.00 0.00 0.00 3.56
401 402 1.532794 GTTGGGTGGTGGCAATCCA 60.533 57.895 0.00 0.00 40.85 3.41
402 403 1.118356 GTTGGGTGGTGGCAATCCAA 61.118 55.000 0.00 0.00 45.53 3.53
404 405 0.831288 TGGGTGGTGGCAATCCAAAG 60.831 55.000 0.00 0.00 45.53 2.77
406 407 1.047801 GGTGGTGGCAATCCAAAGTT 58.952 50.000 0.00 0.00 45.53 2.66
407 408 1.000843 GGTGGTGGCAATCCAAAGTTC 59.999 52.381 0.00 0.00 45.53 3.01
409 410 1.337118 GGTGGCAATCCAAAGTTCCA 58.663 50.000 0.00 0.00 45.53 3.53
410 411 1.691434 GGTGGCAATCCAAAGTTCCAA 59.309 47.619 0.00 0.00 45.53 3.53
411 412 2.103941 GGTGGCAATCCAAAGTTCCAAA 59.896 45.455 0.00 0.00 45.53 3.28
412 413 3.130633 GTGGCAATCCAAAGTTCCAAAC 58.869 45.455 0.00 0.00 45.53 2.93
414 415 3.390639 TGGCAATCCAAAGTTCCAAACAT 59.609 39.130 0.00 0.00 39.99 2.71
416 417 4.452114 GGCAATCCAAAGTTCCAAACATTC 59.548 41.667 0.00 0.00 0.00 2.67
417 418 4.452114 GCAATCCAAAGTTCCAAACATTCC 59.548 41.667 0.00 0.00 0.00 3.01
418 419 4.890158 ATCCAAAGTTCCAAACATTCCC 57.110 40.909 0.00 0.00 0.00 3.97
419 420 2.969262 TCCAAAGTTCCAAACATTCCCC 59.031 45.455 0.00 0.00 0.00 4.81
420 421 2.703007 CCAAAGTTCCAAACATTCCCCA 59.297 45.455 0.00 0.00 0.00 4.96
421 422 3.244181 CCAAAGTTCCAAACATTCCCCAG 60.244 47.826 0.00 0.00 0.00 4.45
423 424 3.833559 AGTTCCAAACATTCCCCAGAT 57.166 42.857 0.00 0.00 0.00 2.90
424 425 4.132122 AGTTCCAAACATTCCCCAGATT 57.868 40.909 0.00 0.00 0.00 2.40
426 427 2.178580 TCCAAACATTCCCCAGATTGC 58.821 47.619 0.00 0.00 0.00 3.56
427 428 1.207811 CCAAACATTCCCCAGATTGCC 59.792 52.381 0.00 0.00 0.00 4.52
428 429 1.207811 CAAACATTCCCCAGATTGCCC 59.792 52.381 0.00 0.00 0.00 5.36
429 430 0.325577 AACATTCCCCAGATTGCCCC 60.326 55.000 0.00 0.00 0.00 5.80
430 431 1.224003 ACATTCCCCAGATTGCCCCT 61.224 55.000 0.00 0.00 0.00 4.79
431 432 0.468771 CATTCCCCAGATTGCCCCTC 60.469 60.000 0.00 0.00 0.00 4.30
432 433 0.628668 ATTCCCCAGATTGCCCCTCT 60.629 55.000 0.00 0.00 0.00 3.69
434 435 2.123982 CCCAGATTGCCCCTCTGC 60.124 66.667 2.60 0.00 39.04 4.26
435 436 2.687610 CCCAGATTGCCCCTCTGCT 61.688 63.158 2.60 0.00 39.04 4.24
436 437 1.305623 CCAGATTGCCCCTCTGCTT 59.694 57.895 2.60 0.00 39.04 3.91
437 438 0.324091 CCAGATTGCCCCTCTGCTTT 60.324 55.000 2.60 0.00 39.04 3.51
439 440 1.203994 CAGATTGCCCCTCTGCTTTTG 59.796 52.381 0.00 0.00 34.24 2.44
440 441 0.533951 GATTGCCCCTCTGCTTTTGG 59.466 55.000 0.00 0.00 0.00 3.28
441 442 0.906282 ATTGCCCCTCTGCTTTTGGG 60.906 55.000 0.00 0.00 41.23 4.12
443 444 2.118076 CCCCTCTGCTTTTGGGCA 59.882 61.111 0.00 0.00 39.61 5.36
465 4407 4.095185 CACCCAACGTAAACTTCACTTTCA 59.905 41.667 0.00 0.00 0.00 2.69
467 4409 5.008316 ACCCAACGTAAACTTCACTTTCATC 59.992 40.000 0.00 0.00 0.00 2.92
476 4418 3.181454 ACTTCACTTTCATCCCGTCTTGT 60.181 43.478 0.00 0.00 0.00 3.16
478 4420 3.138304 TCACTTTCATCCCGTCTTGTTG 58.862 45.455 0.00 0.00 0.00 3.33
479 4421 3.138304 CACTTTCATCCCGTCTTGTTGA 58.862 45.455 0.00 0.00 0.00 3.18
480 4422 3.753272 CACTTTCATCCCGTCTTGTTGAT 59.247 43.478 0.00 0.00 0.00 2.57
484 4426 2.567169 TCATCCCGTCTTGTTGATCAGT 59.433 45.455 0.00 0.00 0.00 3.41
485 4427 3.767131 TCATCCCGTCTTGTTGATCAGTA 59.233 43.478 0.00 0.00 0.00 2.74
486 4428 3.868757 TCCCGTCTTGTTGATCAGTAG 57.131 47.619 0.00 0.00 0.00 2.57
547 4498 1.746861 CGCCATGGCATACTCTTGGAA 60.747 52.381 34.93 0.00 42.06 3.53
620 4604 4.736896 GACCACGTCTCGGTGCCC 62.737 72.222 0.00 0.00 36.69 5.36
659 4643 2.664851 CTGCGCAACCGAGGAACA 60.665 61.111 13.05 0.00 36.29 3.18
711 4695 1.519455 GACAGCTTCACCCCGATCG 60.519 63.158 8.51 8.51 0.00 3.69
712 4696 2.892425 CAGCTTCACCCCGATCGC 60.892 66.667 10.32 0.00 0.00 4.58
781 4765 0.518764 GTGTACGTCGAGTCGCTGAG 60.519 60.000 7.92 1.32 0.00 3.35
783 4767 2.030958 TACGTCGAGTCGCTGAGCA 61.031 57.895 7.92 0.00 0.00 4.26
952 6186 1.301401 TGTTCCGGCACTTCTTCGG 60.301 57.895 5.66 0.00 44.59 4.30
954 6188 3.248446 TTCCGGCACTTCTTCGGGG 62.248 63.158 0.00 0.00 43.54 5.73
966 6200 2.107041 CTTCGGGGTGTGCCTGTGTA 62.107 60.000 0.00 0.00 34.45 2.90
967 6201 1.697082 TTCGGGGTGTGCCTGTGTAA 61.697 55.000 0.00 0.00 34.45 2.41
976 6210 2.040544 GCCTGTGTAAGCCGCACAT 61.041 57.895 6.14 0.00 44.54 3.21
977 6211 1.586154 GCCTGTGTAAGCCGCACATT 61.586 55.000 6.14 0.00 44.54 2.71
1029 6263 1.002624 CTGCTCTTTGCCCGGGTTA 60.003 57.895 24.63 9.20 42.00 2.85
1030 6264 0.608035 CTGCTCTTTGCCCGGGTTAA 60.608 55.000 24.63 15.38 42.00 2.01
1032 6266 0.608308 GCTCTTTGCCCGGGTTAACT 60.608 55.000 24.63 0.00 35.15 2.24
1046 6283 1.890489 GTTAACTGCAAAATCCGGGGT 59.110 47.619 0.00 0.00 0.00 4.95
1047 6284 2.296073 TAACTGCAAAATCCGGGGTT 57.704 45.000 0.00 0.00 0.00 4.11
1048 6285 0.678950 AACTGCAAAATCCGGGGTTG 59.321 50.000 0.00 4.90 0.00 3.77
1049 6286 1.184970 ACTGCAAAATCCGGGGTTGG 61.185 55.000 0.00 0.00 0.00 3.77
1050 6287 0.897863 CTGCAAAATCCGGGGTTGGA 60.898 55.000 0.00 4.13 43.58 3.53
1051 6288 0.470080 TGCAAAATCCGGGGTTGGAA 60.470 50.000 0.00 0.00 42.46 3.53
1052 6289 0.037697 GCAAAATCCGGGGTTGGAAC 60.038 55.000 0.00 0.00 42.46 3.62
1083 6320 2.820787 GGAGTTCTTCTTCTCGGAGTCA 59.179 50.000 4.69 0.00 0.00 3.41
1135 6372 2.685380 AGCCTTCCAGGTCCTCCG 60.685 66.667 0.00 0.00 37.80 4.63
1208 6814 0.251386 TGTGCTCGAGGGAGTTCTCT 60.251 55.000 15.58 0.00 42.53 3.10
1218 6824 4.499526 CGAGGGAGTTCTCTGATTGATCTG 60.500 50.000 0.00 0.00 0.00 2.90
1224 6830 4.081198 AGTTCTCTGATTGATCTGACCACC 60.081 45.833 0.00 0.00 32.42 4.61
1231 6837 5.211201 TGATTGATCTGACCACCTATCTCA 58.789 41.667 0.00 0.00 0.00 3.27
1247 6853 1.447317 CTCAGCAACCGCAACCTTGT 61.447 55.000 0.00 0.00 42.27 3.16
1295 6904 3.435186 GCCGCCAACTCCTCAAGC 61.435 66.667 0.00 0.00 0.00 4.01
1297 6906 1.743252 CCGCCAACTCCTCAAGCTC 60.743 63.158 0.00 0.00 0.00 4.09
1300 6909 1.163554 GCCAACTCCTCAAGCTCAAG 58.836 55.000 0.00 0.00 0.00 3.02
1301 6910 1.818642 CCAACTCCTCAAGCTCAAGG 58.181 55.000 7.84 7.84 0.00 3.61
1302 6911 1.072965 CCAACTCCTCAAGCTCAAGGT 59.927 52.381 12.71 0.00 34.12 3.50
1304 6913 1.722034 ACTCCTCAAGCTCAAGGTGA 58.278 50.000 18.31 4.49 34.12 4.02
1306 6915 2.641815 ACTCCTCAAGCTCAAGGTGAAT 59.358 45.455 18.31 0.56 34.12 2.57
1341 8056 4.025040 AGGATTCAGAATGTTGCTGTGA 57.975 40.909 0.00 0.00 37.40 3.58
1342 8057 4.597004 AGGATTCAGAATGTTGCTGTGAT 58.403 39.130 0.00 0.00 37.40 3.06
1343 8058 4.398358 AGGATTCAGAATGTTGCTGTGATG 59.602 41.667 0.00 0.00 37.40 3.07
1344 8059 4.157289 GGATTCAGAATGTTGCTGTGATGT 59.843 41.667 0.00 0.00 37.40 3.06
1345 8060 4.492791 TTCAGAATGTTGCTGTGATGTG 57.507 40.909 0.00 0.00 37.40 3.21
1346 8061 3.742385 TCAGAATGTTGCTGTGATGTGA 58.258 40.909 0.00 0.00 37.40 3.58
1347 8062 4.329392 TCAGAATGTTGCTGTGATGTGAT 58.671 39.130 0.00 0.00 37.40 3.06
1348 8063 4.155280 TCAGAATGTTGCTGTGATGTGATG 59.845 41.667 0.00 0.00 37.40 3.07
1349 8064 4.077108 AGAATGTTGCTGTGATGTGATGT 58.923 39.130 0.00 0.00 0.00 3.06
1350 8065 3.842732 ATGTTGCTGTGATGTGATGTG 57.157 42.857 0.00 0.00 0.00 3.21
1351 8066 1.881324 TGTTGCTGTGATGTGATGTGG 59.119 47.619 0.00 0.00 0.00 4.17
1352 8067 2.153645 GTTGCTGTGATGTGATGTGGA 58.846 47.619 0.00 0.00 0.00 4.02
1363 8078 2.094234 TGTGATGTGGATGTACTGACCG 60.094 50.000 0.00 0.00 0.00 4.79
1395 8131 1.145819 GAGGACATCCAGGCAGAGC 59.854 63.158 0.00 0.00 38.89 4.09
1445 8187 0.249741 CGACAGGAAAGGTGACGGTT 60.250 55.000 0.00 0.00 30.91 4.44
1449 8197 2.224450 ACAGGAAAGGTGACGGTTAAGG 60.224 50.000 0.00 0.00 0.00 2.69
1516 8270 0.620121 AAGAGGAAGCTGGAGGAGGG 60.620 60.000 0.00 0.00 0.00 4.30
1552 8306 4.070552 GAGCTCGGCGTTGGACCT 62.071 66.667 6.85 0.00 0.00 3.85
1565 8319 3.394836 GACCTCTCTTGCCCGCCT 61.395 66.667 0.00 0.00 0.00 5.52
1597 8354 4.003788 CTGGAAGTCACCGCCCGT 62.004 66.667 0.00 0.00 0.00 5.28
1617 8374 1.168714 GACAGGCAAAGATGGTGACC 58.831 55.000 0.00 0.00 0.00 4.02
1721 8495 2.152699 CGCCTCAAGCTACGTGTCG 61.153 63.158 0.00 0.00 40.39 4.35
1752 8526 1.270274 TGAGCAAACGCAGATGCAAAT 59.730 42.857 5.55 0.00 43.75 2.32
1770 8544 4.673320 GCAAATTGCAAATCCAAATCAGCC 60.673 41.667 13.73 0.00 44.26 4.85
1771 8545 2.766345 TTGCAAATCCAAATCAGCCC 57.234 45.000 0.00 0.00 0.00 5.19
1772 8546 0.903942 TGCAAATCCAAATCAGCCCC 59.096 50.000 0.00 0.00 0.00 5.80
1779 8553 0.527565 CCAAATCAGCCCCTTGTTCG 59.472 55.000 0.00 0.00 0.00 3.95
1783 8557 0.749454 ATCAGCCCCTTGTTCGATGC 60.749 55.000 0.00 0.00 0.00 3.91
1785 8559 4.179579 GCCCCTTGTTCGATGCGC 62.180 66.667 0.00 0.00 0.00 6.09
1795 8569 1.135689 GTTCGATGCGCATTGTTCCTT 60.136 47.619 31.59 6.55 0.00 3.36
1806 8580 5.639757 CGCATTGTTCCTTCATGATTTGTA 58.360 37.500 0.00 0.00 0.00 2.41
1810 8584 7.062605 GCATTGTTCCTTCATGATTTGTAGTTG 59.937 37.037 0.00 0.00 0.00 3.16
1817 8591 6.183360 CCTTCATGATTTGTAGTTGTGGATCC 60.183 42.308 4.20 4.20 0.00 3.36
1833 8607 2.989840 GGATCCATCGATCGACATTGAC 59.010 50.000 22.06 10.31 45.16 3.18
1836 8617 4.058721 TCCATCGATCGACATTGACATT 57.941 40.909 22.06 0.00 0.00 2.71
1843 8624 4.551410 CGATCGACATTGACATTCATGGTG 60.551 45.833 10.26 0.00 0.00 4.17
2087 9049 2.125512 GGACATGAAGCGAGCCGT 60.126 61.111 0.00 0.00 0.00 5.68
2114 9076 2.283966 CCACCCAGACCTCGACCT 60.284 66.667 0.00 0.00 0.00 3.85
2119 9081 4.135153 CAGACCTCGACCTGGCGG 62.135 72.222 9.91 1.39 0.00 6.13
2139 9101 2.107750 CTCATCGTGCCGCTCCAT 59.892 61.111 0.00 0.00 0.00 3.41
2143 9105 3.687321 ATCGTGCCGCTCCATGCTT 62.687 57.895 0.00 0.00 40.11 3.91
2185 9166 3.550992 CGCCCGACGGTCGAAATG 61.551 66.667 30.33 16.34 43.74 2.32
2198 9196 4.271049 CGGTCGAAATGCATGTCTAAGATT 59.729 41.667 14.94 0.00 0.00 2.40
2206 9204 7.951347 AATGCATGTCTAAGATTTCTTTCCT 57.049 32.000 0.00 0.00 37.40 3.36
2212 9210 9.270640 CATGTCTAAGATTTCTTTCCTATGGAG 57.729 37.037 0.00 0.00 37.40 3.86
2215 9213 7.713073 GTCTAAGATTTCTTTCCTATGGAGTGG 59.287 40.741 0.00 0.00 37.40 4.00
2219 9217 1.210478 TCTTTCCTATGGAGTGGCTGC 59.790 52.381 0.00 0.00 31.21 5.25
2254 9252 1.905922 GCACTTCCGTTCAGCAGAGC 61.906 60.000 0.00 0.00 0.00 4.09
2296 9294 9.138062 CTTCCGTTCATCAGAGATCTTATTATG 57.862 37.037 0.00 0.00 0.00 1.90
2329 9327 9.751542 AACTTGTTAGAGATATTATTCTCCGTG 57.248 33.333 0.00 0.00 42.63 4.94
2343 9341 0.179004 TCCGTGGAACATTTGCAGGT 60.179 50.000 0.00 0.00 44.52 4.00
2381 9587 8.675705 TGACTTGATTTATCTGAGTTTTGTGA 57.324 30.769 0.00 0.00 0.00 3.58
2385 9591 7.672983 TGATTTATCTGAGTTTTGTGACCTC 57.327 36.000 0.00 0.00 0.00 3.85
2386 9592 7.223584 TGATTTATCTGAGTTTTGTGACCTCA 58.776 34.615 0.00 0.00 0.00 3.86
2387 9593 7.719193 TGATTTATCTGAGTTTTGTGACCTCAA 59.281 33.333 0.00 0.00 0.00 3.02
2397 9603 2.047179 GACCTCAACTGGGTCGGC 60.047 66.667 0.00 0.00 42.84 5.54
2399 9605 2.046892 CCTCAACTGGGTCGGCAG 60.047 66.667 0.00 0.00 0.00 4.85
2400 9606 2.046892 CTCAACTGGGTCGGCAGG 60.047 66.667 0.00 0.00 0.00 4.85
2402 9608 4.722700 CAACTGGGTCGGCAGGGG 62.723 72.222 0.00 0.00 0.00 4.79
2409 9615 4.083862 GTCGGCAGGGGGTCTGTC 62.084 72.222 0.00 0.00 45.08 3.51
2412 9618 3.090765 GGCAGGGGGTCTGTCATT 58.909 61.111 0.00 0.00 46.81 2.57
2413 9619 1.379044 GGCAGGGGGTCTGTCATTG 60.379 63.158 0.00 0.00 46.81 2.82
2414 9620 1.380302 GCAGGGGGTCTGTCATTGT 59.620 57.895 0.00 0.00 45.08 2.71
2415 9621 0.962356 GCAGGGGGTCTGTCATTGTG 60.962 60.000 0.00 0.00 45.08 3.33
2416 9622 0.962356 CAGGGGGTCTGTCATTGTGC 60.962 60.000 0.00 0.00 38.64 4.57
2418 9624 2.040544 GGGGTCTGTCATTGTGCCG 61.041 63.158 0.00 0.00 0.00 5.69
2419 9625 1.302511 GGGTCTGTCATTGTGCCGT 60.303 57.895 0.00 0.00 0.00 5.68
2420 9626 1.577328 GGGTCTGTCATTGTGCCGTG 61.577 60.000 0.00 0.00 0.00 4.94
2421 9627 0.884704 GGTCTGTCATTGTGCCGTGT 60.885 55.000 0.00 0.00 0.00 4.49
2422 9628 0.944386 GTCTGTCATTGTGCCGTGTT 59.056 50.000 0.00 0.00 0.00 3.32
2423 9629 1.069906 GTCTGTCATTGTGCCGTGTTC 60.070 52.381 0.00 0.00 0.00 3.18
2424 9630 1.202639 TCTGTCATTGTGCCGTGTTCT 60.203 47.619 0.00 0.00 0.00 3.01
2425 9631 1.603802 CTGTCATTGTGCCGTGTTCTT 59.396 47.619 0.00 0.00 0.00 2.52
2428 11089 1.601903 TCATTGTGCCGTGTTCTTCAC 59.398 47.619 0.00 0.00 43.03 3.18
2446 11107 3.329386 TCACAGTTTGTCTAGATGCTGC 58.671 45.455 0.00 0.00 0.00 5.25
2448 11109 2.038952 ACAGTTTGTCTAGATGCTGCCA 59.961 45.455 0.00 0.00 0.00 4.92
2449 11110 2.676839 CAGTTTGTCTAGATGCTGCCAG 59.323 50.000 0.00 0.00 0.00 4.85
2450 11111 2.012673 GTTTGTCTAGATGCTGCCAGG 58.987 52.381 0.00 0.00 0.00 4.45
2451 11112 1.571955 TTGTCTAGATGCTGCCAGGA 58.428 50.000 0.00 0.00 0.00 3.86
2452 11113 1.571955 TGTCTAGATGCTGCCAGGAA 58.428 50.000 0.00 0.00 0.00 3.36
2453 11114 2.121948 TGTCTAGATGCTGCCAGGAAT 58.878 47.619 0.00 0.00 0.00 3.01
2454 11115 2.507058 TGTCTAGATGCTGCCAGGAATT 59.493 45.455 0.00 0.00 0.00 2.17
2455 11116 3.137533 GTCTAGATGCTGCCAGGAATTC 58.862 50.000 0.00 0.00 0.00 2.17
2456 11117 2.105477 TCTAGATGCTGCCAGGAATTCC 59.895 50.000 17.31 17.31 0.00 3.01
2481 11142 4.640647 GGCTCAGATTTTCTACCCGATTTT 59.359 41.667 0.00 0.00 0.00 1.82
2483 11144 5.220873 GCTCAGATTTTCTACCCGATTTTCC 60.221 44.000 0.00 0.00 0.00 3.13
2485 11146 6.481643 TCAGATTTTCTACCCGATTTTCCTT 58.518 36.000 0.00 0.00 0.00 3.36
2486 11147 7.626390 TCAGATTTTCTACCCGATTTTCCTTA 58.374 34.615 0.00 0.00 0.00 2.69
2487 11148 8.272173 TCAGATTTTCTACCCGATTTTCCTTAT 58.728 33.333 0.00 0.00 0.00 1.73
2488 11149 9.555727 CAGATTTTCTACCCGATTTTCCTTATA 57.444 33.333 0.00 0.00 0.00 0.98
2489 11150 9.557061 AGATTTTCTACCCGATTTTCCTTATAC 57.443 33.333 0.00 0.00 0.00 1.47
2491 11152 6.713762 TTCTACCCGATTTTCCTTATACGA 57.286 37.500 0.00 0.00 0.00 3.43
2498 11194 6.762661 CCCGATTTTCCTTATACGAAAGGTTA 59.237 38.462 13.14 3.90 45.37 2.85
2508 11204 9.085250 CCTTATACGAAAGGTTAGTTCTCTTTC 57.915 37.037 0.00 0.00 41.06 2.62
2518 11214 8.307921 AGGTTAGTTCTCTTTCGTTATGAAAC 57.692 34.615 0.00 0.00 41.59 2.78
2519 11215 8.148999 AGGTTAGTTCTCTTTCGTTATGAAACT 58.851 33.333 0.00 0.00 41.59 2.66
2520 11216 9.415544 GGTTAGTTCTCTTTCGTTATGAAACTA 57.584 33.333 0.00 0.00 41.59 2.24
2523 11219 8.882415 AGTTCTCTTTCGTTATGAAACTACAA 57.118 30.769 0.00 0.00 41.59 2.41
2535 11231 1.878953 AACTACAAGAACACCCTGCG 58.121 50.000 0.00 0.00 0.00 5.18
2536 11232 0.756903 ACTACAAGAACACCCTGCGT 59.243 50.000 0.00 0.00 0.00 5.24
2537 11233 1.965643 ACTACAAGAACACCCTGCGTA 59.034 47.619 0.00 0.00 0.00 4.42
2540 11250 2.218603 ACAAGAACACCCTGCGTAAAG 58.781 47.619 0.00 0.00 0.00 1.85
2546 11256 2.871453 ACACCCTGCGTAAAGGAAAAT 58.129 42.857 2.88 0.00 40.02 1.82
2550 11260 4.022329 CACCCTGCGTAAAGGAAAATTCTT 60.022 41.667 2.88 0.00 40.02 2.52
2551 11261 4.587262 ACCCTGCGTAAAGGAAAATTCTTT 59.413 37.500 2.88 0.00 40.02 2.52
2564 11274 7.334858 AGGAAAATTCTTTACTGCAAACCAAA 58.665 30.769 0.00 0.00 34.17 3.28
2572 11282 7.946207 TCTTTACTGCAAACCAAATACATGAA 58.054 30.769 0.00 0.00 0.00 2.57
2573 11283 8.417106 TCTTTACTGCAAACCAAATACATGAAA 58.583 29.630 0.00 0.00 0.00 2.69
2574 11284 7.938563 TTACTGCAAACCAAATACATGAAAC 57.061 32.000 0.00 0.00 0.00 2.78
2575 11285 6.160576 ACTGCAAACCAAATACATGAAACT 57.839 33.333 0.00 0.00 0.00 2.66
2581 11292 5.255397 ACCAAATACATGAAACTCTCCCA 57.745 39.130 0.00 0.00 0.00 4.37
2584 11295 5.106157 CCAAATACATGAAACTCTCCCACAC 60.106 44.000 0.00 0.00 0.00 3.82
2587 11298 3.744660 ACATGAAACTCTCCCACACTTC 58.255 45.455 0.00 0.00 0.00 3.01
2596 11307 4.020128 ACTCTCCCACACTTCACCTATTTC 60.020 45.833 0.00 0.00 0.00 2.17
2597 11308 4.168101 TCTCCCACACTTCACCTATTTCT 58.832 43.478 0.00 0.00 0.00 2.52
2598 11309 5.338632 TCTCCCACACTTCACCTATTTCTA 58.661 41.667 0.00 0.00 0.00 2.10
2599 11310 5.964477 TCTCCCACACTTCACCTATTTCTAT 59.036 40.000 0.00 0.00 0.00 1.98
2600 11311 6.443849 TCTCCCACACTTCACCTATTTCTATT 59.556 38.462 0.00 0.00 0.00 1.73
2601 11312 7.027874 TCCCACACTTCACCTATTTCTATTT 57.972 36.000 0.00 0.00 0.00 1.40
2602 11313 7.110155 TCCCACACTTCACCTATTTCTATTTC 58.890 38.462 0.00 0.00 0.00 2.17
2603 11314 7.037586 TCCCACACTTCACCTATTTCTATTTCT 60.038 37.037 0.00 0.00 0.00 2.52
2604 11315 7.281100 CCCACACTTCACCTATTTCTATTTCTC 59.719 40.741 0.00 0.00 0.00 2.87
2605 11316 7.824289 CCACACTTCACCTATTTCTATTTCTCA 59.176 37.037 0.00 0.00 0.00 3.27
2606 11317 9.219603 CACACTTCACCTATTTCTATTTCTCAA 57.780 33.333 0.00 0.00 0.00 3.02
2607 11318 9.793259 ACACTTCACCTATTTCTATTTCTCAAA 57.207 29.630 0.00 0.00 0.00 2.69
2643 11354 9.396022 AGAAAAACTGAACTGAACTGAAGAATA 57.604 29.630 0.00 0.00 0.00 1.75
2661 11372 4.289672 AGAATACTCACAAACCCACCAGAT 59.710 41.667 0.00 0.00 0.00 2.90
2733 11447 2.486191 CCAATATCCAGGCCTCACACTC 60.486 54.545 0.00 0.00 0.00 3.51
2882 11600 3.243569 CGCCATTTACAAACCAGGTGAAA 60.244 43.478 0.00 0.00 0.00 2.69
3241 11959 7.395617 ACCTTTTATGACCTTCTCTAAAGGAC 58.604 38.462 15.38 5.21 41.53 3.85
3250 11968 4.034279 CCTTCTCTAAAGGACTCTACGTCG 59.966 50.000 0.00 0.00 43.79 5.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.404671 TCCTTCCAAAATTATTCAAGGCTAC 57.595 36.000 0.00 0.00 32.00 3.58
1 2 8.429237 TTTCCTTCCAAAATTATTCAAGGCTA 57.571 30.769 0.00 0.00 32.00 3.93
12 13 9.693739 ACCTAAAAACATTTTCCTTCCAAAATT 57.306 25.926 0.00 0.00 34.37 1.82
13 14 9.119418 CACCTAAAAACATTTTCCTTCCAAAAT 57.881 29.630 0.00 0.00 36.57 1.82
14 15 7.066404 GCACCTAAAAACATTTTCCTTCCAAAA 59.934 33.333 0.00 0.00 0.00 2.44
15 16 6.540551 GCACCTAAAAACATTTTCCTTCCAAA 59.459 34.615 0.00 0.00 0.00 3.28
16 17 6.052360 GCACCTAAAAACATTTTCCTTCCAA 58.948 36.000 0.00 0.00 0.00 3.53
17 18 5.454045 GGCACCTAAAAACATTTTCCTTCCA 60.454 40.000 0.00 0.00 0.00 3.53
19 20 5.853936 AGGCACCTAAAAACATTTTCCTTC 58.146 37.500 0.00 0.00 0.00 3.46
20 21 5.887214 AGGCACCTAAAAACATTTTCCTT 57.113 34.783 0.00 0.00 0.00 3.36
21 22 5.887214 AAGGCACCTAAAAACATTTTCCT 57.113 34.783 0.00 0.00 0.00 3.36
22 23 6.517605 TGTAAGGCACCTAAAAACATTTTCC 58.482 36.000 0.00 0.00 0.00 3.13
24 25 9.705290 CTAATGTAAGGCACCTAAAAACATTTT 57.295 29.630 17.51 0.00 0.00 1.82
26 27 7.039363 TGCTAATGTAAGGCACCTAAAAACATT 60.039 33.333 16.92 16.92 0.00 2.71
27 28 6.435904 TGCTAATGTAAGGCACCTAAAAACAT 59.564 34.615 0.00 0.00 0.00 2.71
28 29 5.770663 TGCTAATGTAAGGCACCTAAAAACA 59.229 36.000 0.00 0.00 0.00 2.83
29 30 6.262193 TGCTAATGTAAGGCACCTAAAAAC 57.738 37.500 0.00 0.00 0.00 2.43
30 31 6.902771 TTGCTAATGTAAGGCACCTAAAAA 57.097 33.333 0.00 0.00 35.62 1.94
31 32 6.902771 TTTGCTAATGTAAGGCACCTAAAA 57.097 33.333 0.00 0.00 35.62 1.52
32 33 7.475137 AATTTGCTAATGTAAGGCACCTAAA 57.525 32.000 0.00 0.00 35.62 1.85
33 34 8.582657 TTAATTTGCTAATGTAAGGCACCTAA 57.417 30.769 0.00 0.00 35.62 2.69
34 35 8.582657 TTTAATTTGCTAATGTAAGGCACCTA 57.417 30.769 0.00 0.00 35.62 3.08
35 36 7.178451 ACTTTAATTTGCTAATGTAAGGCACCT 59.822 33.333 14.82 0.00 35.62 4.00
36 37 7.275560 CACTTTAATTTGCTAATGTAAGGCACC 59.724 37.037 14.82 0.00 35.62 5.01
37 38 8.026607 TCACTTTAATTTGCTAATGTAAGGCAC 58.973 33.333 14.82 0.00 35.62 5.01
72 73 9.865484 GCAAAGGACGAAATATAGAAGTTTATC 57.135 33.333 0.00 0.00 0.00 1.75
73 74 8.837389 GGCAAAGGACGAAATATAGAAGTTTAT 58.163 33.333 0.00 0.00 0.00 1.40
74 75 7.825270 TGGCAAAGGACGAAATATAGAAGTTTA 59.175 33.333 0.00 0.00 0.00 2.01
75 76 6.657541 TGGCAAAGGACGAAATATAGAAGTTT 59.342 34.615 0.00 0.00 0.00 2.66
76 77 6.177610 TGGCAAAGGACGAAATATAGAAGTT 58.822 36.000 0.00 0.00 0.00 2.66
77 78 5.741011 TGGCAAAGGACGAAATATAGAAGT 58.259 37.500 0.00 0.00 0.00 3.01
79 80 6.591935 AGATGGCAAAGGACGAAATATAGAA 58.408 36.000 0.00 0.00 0.00 2.10
80 81 6.174720 AGATGGCAAAGGACGAAATATAGA 57.825 37.500 0.00 0.00 0.00 1.98
82 83 6.119536 ACAAGATGGCAAAGGACGAAATATA 58.880 36.000 0.00 0.00 0.00 0.86
83 84 4.949856 ACAAGATGGCAAAGGACGAAATAT 59.050 37.500 0.00 0.00 0.00 1.28
84 85 4.331968 ACAAGATGGCAAAGGACGAAATA 58.668 39.130 0.00 0.00 0.00 1.40
85 86 3.157087 ACAAGATGGCAAAGGACGAAAT 58.843 40.909 0.00 0.00 0.00 2.17
87 88 2.270352 ACAAGATGGCAAAGGACGAA 57.730 45.000 0.00 0.00 0.00 3.85
88 89 3.410631 TTACAAGATGGCAAAGGACGA 57.589 42.857 0.00 0.00 0.00 4.20
89 90 4.396166 AGATTTACAAGATGGCAAAGGACG 59.604 41.667 0.00 0.00 0.00 4.79
90 91 5.904362 AGATTTACAAGATGGCAAAGGAC 57.096 39.130 0.00 0.00 0.00 3.85
91 92 6.009589 TGAAGATTTACAAGATGGCAAAGGA 58.990 36.000 0.00 0.00 0.00 3.36
94 95 5.047377 GGGTGAAGATTTACAAGATGGCAAA 60.047 40.000 0.00 0.00 0.00 3.68
95 96 4.462483 GGGTGAAGATTTACAAGATGGCAA 59.538 41.667 0.00 0.00 0.00 4.52
96 97 4.016444 GGGTGAAGATTTACAAGATGGCA 58.984 43.478 0.00 0.00 0.00 4.92
98 99 5.711976 AGTTGGGTGAAGATTTACAAGATGG 59.288 40.000 0.00 0.00 0.00 3.51
100 101 5.946377 GGAGTTGGGTGAAGATTTACAAGAT 59.054 40.000 0.00 0.00 0.00 2.40
101 102 5.163141 TGGAGTTGGGTGAAGATTTACAAGA 60.163 40.000 0.00 0.00 0.00 3.02
104 105 4.394729 GTGGAGTTGGGTGAAGATTTACA 58.605 43.478 0.00 0.00 0.00 2.41
105 106 3.756963 GGTGGAGTTGGGTGAAGATTTAC 59.243 47.826 0.00 0.00 0.00 2.01
107 108 2.814097 CGGTGGAGTTGGGTGAAGATTT 60.814 50.000 0.00 0.00 0.00 2.17
108 109 1.271379 CGGTGGAGTTGGGTGAAGATT 60.271 52.381 0.00 0.00 0.00 2.40
109 110 0.324943 CGGTGGAGTTGGGTGAAGAT 59.675 55.000 0.00 0.00 0.00 2.40
110 111 1.752198 CGGTGGAGTTGGGTGAAGA 59.248 57.895 0.00 0.00 0.00 2.87
113 114 1.122632 TAAGCGGTGGAGTTGGGTGA 61.123 55.000 0.00 0.00 0.00 4.02
117 118 3.081804 AGATTTTAAGCGGTGGAGTTGG 58.918 45.455 0.00 0.00 0.00 3.77
119 120 4.019591 ACCTAGATTTTAAGCGGTGGAGTT 60.020 41.667 0.00 0.00 0.00 3.01
120 121 3.518303 ACCTAGATTTTAAGCGGTGGAGT 59.482 43.478 0.00 0.00 0.00 3.85
122 123 3.516300 TCACCTAGATTTTAAGCGGTGGA 59.484 43.478 0.00 0.00 41.58 4.02
123 124 3.869065 TCACCTAGATTTTAAGCGGTGG 58.131 45.455 0.00 0.00 41.58 4.61
125 126 4.369182 CGATCACCTAGATTTTAAGCGGT 58.631 43.478 0.00 0.00 37.00 5.68
126 127 3.184581 GCGATCACCTAGATTTTAAGCGG 59.815 47.826 0.00 0.00 37.00 5.52
127 128 3.802139 TGCGATCACCTAGATTTTAAGCG 59.198 43.478 0.00 0.00 37.00 4.68
129 130 6.238211 CCAAGTGCGATCACCTAGATTTTAAG 60.238 42.308 0.00 0.00 44.16 1.85
131 132 5.116180 CCAAGTGCGATCACCTAGATTTTA 58.884 41.667 0.00 0.00 44.16 1.52
132 133 3.941483 CCAAGTGCGATCACCTAGATTTT 59.059 43.478 0.00 0.00 44.16 1.82
133 134 3.055094 ACCAAGTGCGATCACCTAGATTT 60.055 43.478 0.00 0.00 44.16 2.17
134 135 2.501723 ACCAAGTGCGATCACCTAGATT 59.498 45.455 0.00 0.00 44.16 2.40
135 136 2.111384 ACCAAGTGCGATCACCTAGAT 58.889 47.619 0.00 0.00 44.16 1.98
137 138 3.520290 TTACCAAGTGCGATCACCTAG 57.480 47.619 0.00 0.00 44.16 3.02
138 139 3.965379 TTTACCAAGTGCGATCACCTA 57.035 42.857 0.00 0.00 44.16 3.08
139 140 2.851263 TTTACCAAGTGCGATCACCT 57.149 45.000 0.00 0.00 44.16 4.00
140 141 5.554822 TTTATTTACCAAGTGCGATCACC 57.445 39.130 0.00 0.00 44.16 4.02
143 144 6.898189 CGTAGTTTTATTTACCAAGTGCGATC 59.102 38.462 0.00 0.00 32.59 3.69
144 145 6.673796 GCGTAGTTTTATTTACCAAGTGCGAT 60.674 38.462 0.00 0.00 32.59 4.58
145 146 5.389725 GCGTAGTTTTATTTACCAAGTGCGA 60.390 40.000 0.00 0.00 32.59 5.10
146 147 4.784550 GCGTAGTTTTATTTACCAAGTGCG 59.215 41.667 0.00 0.00 33.61 5.34
147 148 5.934921 AGCGTAGTTTTATTTACCAAGTGC 58.065 37.500 0.00 0.00 0.00 4.40
148 149 7.124347 TGAGCGTAGTTTTATTTACCAAGTG 57.876 36.000 0.00 0.00 0.00 3.16
151 152 7.592164 GCTTTTGAGCGTAGTTTTATTTACCAA 59.408 33.333 0.00 0.00 0.00 3.67
152 153 7.079475 GCTTTTGAGCGTAGTTTTATTTACCA 58.921 34.615 0.00 0.00 0.00 3.25
170 171 2.483877 CACTATGTGCCTTCGCTTTTGA 59.516 45.455 0.00 0.00 35.36 2.69
172 173 2.226437 CACACTATGTGCCTTCGCTTTT 59.774 45.455 0.00 0.00 41.89 2.27
173 174 1.806542 CACACTATGTGCCTTCGCTTT 59.193 47.619 0.00 0.00 41.89 3.51
174 175 1.442769 CACACTATGTGCCTTCGCTT 58.557 50.000 0.00 0.00 41.89 4.68
175 176 3.143675 CACACTATGTGCCTTCGCT 57.856 52.632 0.00 0.00 41.89 4.93
184 185 7.934665 TGAGTACAAATTAACCACACACTATGT 59.065 33.333 0.00 0.00 44.81 2.29
186 187 8.911918 TTGAGTACAAATTAACCACACACTAT 57.088 30.769 0.00 0.00 32.73 2.12
188 189 7.633193 TTTGAGTACAAATTAACCACACACT 57.367 32.000 0.00 0.00 40.47 3.55
222 223 7.553760 CCAAAATTATTGGCTAGCCATCTTTTT 59.446 33.333 36.24 29.61 46.64 1.94
223 224 7.049754 CCAAAATTATTGGCTAGCCATCTTTT 58.950 34.615 36.24 29.20 46.64 2.27
224 225 6.156775 ACCAAAATTATTGGCTAGCCATCTTT 59.843 34.615 36.24 26.05 46.64 2.52
225 226 5.662657 ACCAAAATTATTGGCTAGCCATCTT 59.337 36.000 36.24 24.69 46.64 2.40
226 227 5.211201 ACCAAAATTATTGGCTAGCCATCT 58.789 37.500 36.24 26.93 46.64 2.90
228 229 5.424895 TCAACCAAAATTATTGGCTAGCCAT 59.575 36.000 36.24 26.02 46.64 4.40
229 230 4.774726 TCAACCAAAATTATTGGCTAGCCA 59.225 37.500 32.88 32.88 45.63 4.75
230 231 5.337578 TCAACCAAAATTATTGGCTAGCC 57.662 39.130 27.71 27.71 43.23 3.93
234 235 5.488262 AAGCTCAACCAAAATTATTGGCT 57.512 34.783 15.22 9.10 43.23 4.75
235 236 6.372981 CAAAAGCTCAACCAAAATTATTGGC 58.627 36.000 15.22 7.60 43.23 4.52
237 238 7.193377 AGCAAAAGCTCAACCAAAATTATTG 57.807 32.000 0.00 0.00 0.00 1.90
238 239 7.806409 AAGCAAAAGCTCAACCAAAATTATT 57.194 28.000 0.00 0.00 0.00 1.40
239 240 7.387673 GGTAAGCAAAAGCTCAACCAAAATTAT 59.612 33.333 13.80 0.00 0.00 1.28
240 241 6.704050 GGTAAGCAAAAGCTCAACCAAAATTA 59.296 34.615 13.80 0.00 0.00 1.40
243 244 4.081420 TGGTAAGCAAAAGCTCAACCAAAA 60.081 37.500 17.24 1.29 34.77 2.44
244 245 3.449018 TGGTAAGCAAAAGCTCAACCAAA 59.551 39.130 17.24 1.83 34.77 3.28
245 246 3.027412 TGGTAAGCAAAAGCTCAACCAA 58.973 40.909 17.24 6.27 34.77 3.67
246 247 2.660572 TGGTAAGCAAAAGCTCAACCA 58.339 42.857 16.19 16.19 35.09 3.67
247 248 3.255642 TCATGGTAAGCAAAAGCTCAACC 59.744 43.478 12.47 12.47 0.00 3.77
249 250 4.144297 ACTCATGGTAAGCAAAAGCTCAA 58.856 39.130 0.00 0.00 0.00 3.02
250 251 3.754965 ACTCATGGTAAGCAAAAGCTCA 58.245 40.909 0.00 0.00 0.00 4.26
252 253 4.144297 TCAACTCATGGTAAGCAAAAGCT 58.856 39.130 0.00 0.00 0.00 3.74
279 280 8.291740 GCAACTCTTTTATTTTTCATGCCATTT 58.708 29.630 0.00 0.00 0.00 2.32
280 281 7.094677 GGCAACTCTTTTATTTTTCATGCCATT 60.095 33.333 0.00 0.00 46.66 3.16
281 282 6.372381 GGCAACTCTTTTATTTTTCATGCCAT 59.628 34.615 0.00 0.00 46.66 4.40
282 283 5.700373 GGCAACTCTTTTATTTTTCATGCCA 59.300 36.000 0.00 0.00 46.66 4.92
283 284 6.169419 GGCAACTCTTTTATTTTTCATGCC 57.831 37.500 0.00 0.00 42.26 4.40
284 285 6.783892 TGGCAACTCTTTTATTTTTCATGC 57.216 33.333 0.00 0.00 37.61 4.06
286 287 8.210265 TCCTTTGGCAACTCTTTTATTTTTCAT 58.790 29.630 0.00 0.00 37.61 2.57
287 288 7.560368 TCCTTTGGCAACTCTTTTATTTTTCA 58.440 30.769 0.00 0.00 37.61 2.69
288 289 7.307396 GCTCCTTTGGCAACTCTTTTATTTTTC 60.307 37.037 0.00 0.00 37.61 2.29
289 290 6.483307 GCTCCTTTGGCAACTCTTTTATTTTT 59.517 34.615 0.00 0.00 37.61 1.94
290 291 5.991606 GCTCCTTTGGCAACTCTTTTATTTT 59.008 36.000 0.00 0.00 37.61 1.82
291 292 5.070313 TGCTCCTTTGGCAACTCTTTTATTT 59.930 36.000 0.00 0.00 36.71 1.40
292 293 4.588528 TGCTCCTTTGGCAACTCTTTTATT 59.411 37.500 0.00 0.00 36.71 1.40
293 294 4.151883 TGCTCCTTTGGCAACTCTTTTAT 58.848 39.130 0.00 0.00 36.71 1.40
294 295 3.561143 TGCTCCTTTGGCAACTCTTTTA 58.439 40.909 0.00 0.00 36.71 1.52
295 296 2.387757 TGCTCCTTTGGCAACTCTTTT 58.612 42.857 0.00 0.00 36.71 2.27
297 298 2.165998 GATGCTCCTTTGGCAACTCTT 58.834 47.619 0.00 0.00 43.14 2.85
298 299 1.074405 TGATGCTCCTTTGGCAACTCT 59.926 47.619 0.00 0.00 43.14 3.24
299 300 1.538047 TGATGCTCCTTTGGCAACTC 58.462 50.000 0.00 0.00 43.14 3.01
300 301 1.615392 GTTGATGCTCCTTTGGCAACT 59.385 47.619 0.00 0.00 43.14 3.16
301 302 1.340889 TGTTGATGCTCCTTTGGCAAC 59.659 47.619 0.00 0.00 43.14 4.17
302 303 1.702182 TGTTGATGCTCCTTTGGCAA 58.298 45.000 0.00 0.00 43.14 4.52
303 304 1.546923 CATGTTGATGCTCCTTTGGCA 59.453 47.619 0.00 0.00 44.05 4.92
304 305 2.288961 CATGTTGATGCTCCTTTGGC 57.711 50.000 0.00 0.00 0.00 4.52
314 315 5.749588 TGACAGTTTCTTTTGCATGTTGATG 59.250 36.000 0.00 0.00 0.00 3.07
315 316 5.904941 TGACAGTTTCTTTTGCATGTTGAT 58.095 33.333 0.00 0.00 0.00 2.57
316 317 5.321959 TGACAGTTTCTTTTGCATGTTGA 57.678 34.783 0.00 0.00 0.00 3.18
317 318 6.256104 TGATTGACAGTTTCTTTTGCATGTTG 59.744 34.615 0.00 0.00 0.00 3.33
318 319 6.339730 TGATTGACAGTTTCTTTTGCATGTT 58.660 32.000 0.00 0.00 0.00 2.71
319 320 5.904941 TGATTGACAGTTTCTTTTGCATGT 58.095 33.333 0.00 0.00 0.00 3.21
320 321 6.090358 GGATGATTGACAGTTTCTTTTGCATG 59.910 38.462 0.00 0.00 0.00 4.06
321 322 6.161381 GGATGATTGACAGTTTCTTTTGCAT 58.839 36.000 0.00 0.00 0.00 3.96
323 324 5.531634 TGGATGATTGACAGTTTCTTTTGC 58.468 37.500 0.00 0.00 0.00 3.68
325 326 7.555087 TGTTTGGATGATTGACAGTTTCTTTT 58.445 30.769 0.00 0.00 0.00 2.27
326 327 7.111247 TGTTTGGATGATTGACAGTTTCTTT 57.889 32.000 0.00 0.00 0.00 2.52
327 328 6.713762 TGTTTGGATGATTGACAGTTTCTT 57.286 33.333 0.00 0.00 0.00 2.52
328 329 6.713762 TTGTTTGGATGATTGACAGTTTCT 57.286 33.333 0.00 0.00 0.00 2.52
329 330 7.168135 GTCTTTGTTTGGATGATTGACAGTTTC 59.832 37.037 0.00 0.00 0.00 2.78
330 331 6.980397 GTCTTTGTTTGGATGATTGACAGTTT 59.020 34.615 0.00 0.00 0.00 2.66
331 332 6.461509 GGTCTTTGTTTGGATGATTGACAGTT 60.462 38.462 0.00 0.00 0.00 3.16
332 333 5.010012 GGTCTTTGTTTGGATGATTGACAGT 59.990 40.000 0.00 0.00 0.00 3.55
336 337 6.041865 ACATTGGTCTTTGTTTGGATGATTGA 59.958 34.615 0.00 0.00 0.00 2.57
338 339 6.423776 ACATTGGTCTTTGTTTGGATGATT 57.576 33.333 0.00 0.00 0.00 2.57
339 340 6.423776 AACATTGGTCTTTGTTTGGATGAT 57.576 33.333 0.00 0.00 32.28 2.45
341 342 6.238429 CCAAAACATTGGTCTTTGTTTGGATG 60.238 38.462 6.44 0.00 43.33 3.51
342 343 5.821995 CCAAAACATTGGTCTTTGTTTGGAT 59.178 36.000 6.44 0.00 43.33 3.41
343 344 5.181748 CCAAAACATTGGTCTTTGTTTGGA 58.818 37.500 6.44 0.00 43.33 3.53
345 346 4.201901 GGCCAAAACATTGGTCTTTGTTTG 60.202 41.667 0.00 0.00 43.33 2.93
346 347 3.944650 GGCCAAAACATTGGTCTTTGTTT 59.055 39.130 0.00 0.00 45.39 2.83
347 348 3.054802 TGGCCAAAACATTGGTCTTTGTT 60.055 39.130 0.61 0.00 46.50 2.83
348 349 2.503356 TGGCCAAAACATTGGTCTTTGT 59.497 40.909 0.61 0.00 46.50 2.83
351 352 2.038820 CCATGGCCAAAACATTGGTCTT 59.961 45.455 10.96 4.49 46.50 3.01
352 353 1.624813 CCATGGCCAAAACATTGGTCT 59.375 47.619 10.96 0.00 46.50 3.85
354 355 0.036590 GCCATGGCCAAAACATTGGT 59.963 50.000 27.24 0.00 43.90 3.67
355 356 0.325602 AGCCATGGCCAAAACATTGG 59.674 50.000 33.14 13.68 44.82 3.16
356 357 3.331478 TTAGCCATGGCCAAAACATTG 57.669 42.857 33.14 1.10 43.17 2.82
357 358 4.363991 TTTTAGCCATGGCCAAAACATT 57.636 36.364 31.18 15.97 43.17 2.71
358 359 4.363991 TTTTTAGCCATGGCCAAAACAT 57.636 36.364 33.62 18.13 40.27 2.71
359 360 3.845781 TTTTTAGCCATGGCCAAAACA 57.154 38.095 33.62 23.64 40.27 2.83
360 361 4.082841 CCAATTTTTAGCCATGGCCAAAAC 60.083 41.667 33.62 9.40 40.27 2.43
361 362 4.077822 CCAATTTTTAGCCATGGCCAAAA 58.922 39.130 31.18 31.18 39.23 2.44
362 363 3.073650 ACCAATTTTTAGCCATGGCCAAA 59.926 39.130 33.14 28.35 43.17 3.28
363 364 2.641815 ACCAATTTTTAGCCATGGCCAA 59.358 40.909 33.14 23.92 43.17 4.52
364 365 2.264455 ACCAATTTTTAGCCATGGCCA 58.736 42.857 33.14 18.51 43.17 5.36
365 366 3.009026 CAACCAATTTTTAGCCATGGCC 58.991 45.455 33.14 15.39 43.17 5.36
366 367 3.009026 CCAACCAATTTTTAGCCATGGC 58.991 45.455 30.12 30.12 42.33 4.40
368 369 4.002316 CACCCAACCAATTTTTAGCCATG 58.998 43.478 0.00 0.00 0.00 3.66
369 370 3.008923 CCACCCAACCAATTTTTAGCCAT 59.991 43.478 0.00 0.00 0.00 4.40
370 371 2.370189 CCACCCAACCAATTTTTAGCCA 59.630 45.455 0.00 0.00 0.00 4.75
372 373 3.398406 CACCACCCAACCAATTTTTAGC 58.602 45.455 0.00 0.00 0.00 3.09
373 374 3.805457 GCCACCACCCAACCAATTTTTAG 60.805 47.826 0.00 0.00 0.00 1.85
374 375 2.104963 GCCACCACCCAACCAATTTTTA 59.895 45.455 0.00 0.00 0.00 1.52
375 376 1.133945 GCCACCACCCAACCAATTTTT 60.134 47.619 0.00 0.00 0.00 1.94
376 377 0.472044 GCCACCACCCAACCAATTTT 59.528 50.000 0.00 0.00 0.00 1.82
378 379 0.692419 TTGCCACCACCCAACCAATT 60.692 50.000 0.00 0.00 0.00 2.32
379 380 0.473501 ATTGCCACCACCCAACCAAT 60.474 50.000 0.00 0.00 0.00 3.16
380 381 1.074926 ATTGCCACCACCCAACCAA 60.075 52.632 0.00 0.00 0.00 3.67
381 382 1.532794 GATTGCCACCACCCAACCA 60.533 57.895 0.00 0.00 0.00 3.67
383 384 1.118356 TTGGATTGCCACCACCCAAC 61.118 55.000 0.00 0.00 45.94 3.77
384 385 0.399091 TTTGGATTGCCACCACCCAA 60.399 50.000 0.00 0.00 45.94 4.12
385 386 0.831288 CTTTGGATTGCCACCACCCA 60.831 55.000 0.00 0.00 45.94 4.51
387 388 1.000843 GAACTTTGGATTGCCACCACC 59.999 52.381 0.00 0.00 45.94 4.61
388 389 1.000843 GGAACTTTGGATTGCCACCAC 59.999 52.381 0.00 0.00 45.94 4.16
391 392 3.130633 GTTTGGAACTTTGGATTGCCAC 58.869 45.455 0.00 0.00 45.94 5.01
393 394 3.467374 TGTTTGGAACTTTGGATTGCC 57.533 42.857 0.00 0.00 0.00 4.52
394 395 4.452114 GGAATGTTTGGAACTTTGGATTGC 59.548 41.667 0.00 0.00 0.00 3.56
395 396 4.996758 GGGAATGTTTGGAACTTTGGATTG 59.003 41.667 0.00 0.00 0.00 2.67
396 397 4.041567 GGGGAATGTTTGGAACTTTGGATT 59.958 41.667 0.00 0.00 0.00 3.01
397 398 3.582647 GGGGAATGTTTGGAACTTTGGAT 59.417 43.478 0.00 0.00 0.00 3.41
398 399 2.969262 GGGGAATGTTTGGAACTTTGGA 59.031 45.455 0.00 0.00 0.00 3.53
401 402 3.922375 TCTGGGGAATGTTTGGAACTTT 58.078 40.909 0.00 0.00 0.00 2.66
402 403 3.611025 TCTGGGGAATGTTTGGAACTT 57.389 42.857 0.00 0.00 0.00 2.66
404 405 3.617288 GCAATCTGGGGAATGTTTGGAAC 60.617 47.826 0.00 0.00 0.00 3.62
406 407 2.178580 GCAATCTGGGGAATGTTTGGA 58.821 47.619 0.00 0.00 0.00 3.53
407 408 1.207811 GGCAATCTGGGGAATGTTTGG 59.792 52.381 0.00 0.00 0.00 3.28
409 410 1.571955 GGGCAATCTGGGGAATGTTT 58.428 50.000 0.00 0.00 0.00 2.83
410 411 0.325577 GGGGCAATCTGGGGAATGTT 60.326 55.000 0.00 0.00 0.00 2.71
411 412 1.224003 AGGGGCAATCTGGGGAATGT 61.224 55.000 0.00 0.00 0.00 2.71
412 413 0.468771 GAGGGGCAATCTGGGGAATG 60.469 60.000 0.00 0.00 0.00 2.67
414 415 1.230281 AGAGGGGCAATCTGGGGAA 60.230 57.895 0.00 0.00 0.00 3.97
416 417 2.599597 CAGAGGGGCAATCTGGGG 59.400 66.667 9.63 0.00 40.44 4.96
417 418 2.123982 GCAGAGGGGCAATCTGGG 60.124 66.667 16.86 0.00 43.61 4.45
418 419 0.324091 AAAGCAGAGGGGCAATCTGG 60.324 55.000 16.86 3.03 43.61 3.86
419 420 1.203994 CAAAAGCAGAGGGGCAATCTG 59.796 52.381 12.42 12.42 45.71 2.90
420 421 1.553706 CAAAAGCAGAGGGGCAATCT 58.446 50.000 0.00 0.00 35.83 2.40
421 422 0.533951 CCAAAAGCAGAGGGGCAATC 59.466 55.000 0.00 0.00 35.83 2.67
423 424 1.533753 CCCAAAAGCAGAGGGGCAA 60.534 57.895 0.00 0.00 38.98 4.52
424 425 2.118076 CCCAAAAGCAGAGGGGCA 59.882 61.111 0.00 0.00 38.98 5.36
426 427 2.118076 TGCCCAAAAGCAGAGGGG 59.882 61.111 0.00 0.00 43.04 4.79
427 428 2.278330 GGTGCCCAAAAGCAGAGGG 61.278 63.158 0.00 0.00 45.14 4.30
428 429 2.278330 GGGTGCCCAAAAGCAGAGG 61.278 63.158 1.66 0.00 45.14 3.69
429 430 1.531365 TGGGTGCCCAAAAGCAGAG 60.531 57.895 7.63 0.00 45.14 3.35
430 431 2.605873 TGGGTGCCCAAAAGCAGA 59.394 55.556 7.63 0.00 45.14 4.26
439 440 0.594602 GAAGTTTACGTTGGGTGCCC 59.405 55.000 0.00 0.00 0.00 5.36
440 441 1.002142 GTGAAGTTTACGTTGGGTGCC 60.002 52.381 0.00 0.00 0.00 5.01
441 442 1.944709 AGTGAAGTTTACGTTGGGTGC 59.055 47.619 0.00 0.00 0.00 5.01
442 443 4.095185 TGAAAGTGAAGTTTACGTTGGGTG 59.905 41.667 3.78 0.00 0.00 4.61
443 444 4.263435 TGAAAGTGAAGTTTACGTTGGGT 58.737 39.130 3.78 0.00 0.00 4.51
445 446 5.449304 GGATGAAAGTGAAGTTTACGTTGG 58.551 41.667 3.78 0.00 0.00 3.77
446 447 5.449304 GGGATGAAAGTGAAGTTTACGTTG 58.551 41.667 3.78 0.00 0.00 4.10
447 448 4.212636 CGGGATGAAAGTGAAGTTTACGTT 59.787 41.667 0.00 0.00 0.00 3.99
448 449 3.744426 CGGGATGAAAGTGAAGTTTACGT 59.256 43.478 0.00 0.00 0.00 3.57
449 450 3.744426 ACGGGATGAAAGTGAAGTTTACG 59.256 43.478 0.00 0.00 0.00 3.18
451 452 5.223449 AGACGGGATGAAAGTGAAGTTTA 57.777 39.130 0.00 0.00 0.00 2.01
453 454 3.771577 AGACGGGATGAAAGTGAAGTT 57.228 42.857 0.00 0.00 0.00 2.66
454 455 3.181454 ACAAGACGGGATGAAAGTGAAGT 60.181 43.478 0.00 0.00 0.00 3.01
456 457 3.485463 ACAAGACGGGATGAAAGTGAA 57.515 42.857 0.00 0.00 0.00 3.18
465 4407 3.430929 GCTACTGATCAACAAGACGGGAT 60.431 47.826 0.00 0.00 0.00 3.85
467 4409 2.271800 GCTACTGATCAACAAGACGGG 58.728 52.381 0.00 0.00 0.00 5.28
476 4418 0.535335 GGACGGTGGCTACTGATCAA 59.465 55.000 16.89 0.00 36.65 2.57
478 4420 1.065928 CGGACGGTGGCTACTGATC 59.934 63.158 16.89 9.23 36.65 2.92
479 4421 1.379443 TCGGACGGTGGCTACTGAT 60.379 57.895 16.89 0.00 36.65 2.90
480 4422 2.034532 TCGGACGGTGGCTACTGA 59.965 61.111 16.89 0.00 36.65 3.41
484 4426 3.066190 CTGGTCGGACGGTGGCTA 61.066 66.667 1.43 0.00 0.00 3.93
524 4470 1.097547 AAGAGTATGCCATGGCGCAC 61.098 55.000 30.87 27.88 42.70 5.34
525 4471 1.096967 CAAGAGTATGCCATGGCGCA 61.097 55.000 30.87 18.63 45.51 6.09
526 4472 1.650912 CAAGAGTATGCCATGGCGC 59.349 57.895 30.87 22.38 45.51 6.53
527 4473 0.179048 TCCAAGAGTATGCCATGGCG 60.179 55.000 30.87 14.15 45.51 5.69
528 4474 1.678101 GTTCCAAGAGTATGCCATGGC 59.322 52.381 30.54 30.54 42.35 4.40
536 4487 2.103263 GGATGCCGAGTTCCAAGAGTAT 59.897 50.000 0.00 0.00 31.99 2.12
538 4489 0.250513 GGATGCCGAGTTCCAAGAGT 59.749 55.000 0.00 0.00 31.99 3.24
547 4498 2.660064 GGTGACCAGGATGCCGAGT 61.660 63.158 0.00 0.00 31.97 4.18
620 4604 4.436998 GAGGTGACCCGCTCGTGG 62.437 72.222 0.00 0.00 35.12 4.94
659 4643 3.582208 ACTTCTTGCAGATCTTCTCCAGT 59.418 43.478 0.00 0.00 0.00 4.00
758 4742 1.439201 CGACTCGACGTACACGCAA 60.439 57.895 0.85 0.00 44.43 4.85
952 6186 3.668386 GCTTACACAGGCACACCC 58.332 61.111 0.00 0.00 36.11 4.61
966 6200 1.200020 GCTGTAGAAAATGTGCGGCTT 59.800 47.619 0.00 0.00 0.00 4.35
967 6201 0.804989 GCTGTAGAAAATGTGCGGCT 59.195 50.000 0.00 0.00 0.00 5.52
976 6210 1.202710 TGCCACGGAAGCTGTAGAAAA 60.203 47.619 0.00 0.00 0.00 2.29
977 6211 0.394938 TGCCACGGAAGCTGTAGAAA 59.605 50.000 0.00 0.00 0.00 2.52
1026 6260 1.890489 ACCCCGGATTTTGCAGTTAAC 59.110 47.619 0.73 0.00 0.00 2.01
1029 6263 0.678950 CAACCCCGGATTTTGCAGTT 59.321 50.000 0.73 0.00 0.00 3.16
1030 6264 1.184970 CCAACCCCGGATTTTGCAGT 61.185 55.000 0.73 0.00 0.00 4.40
1032 6266 0.470080 TTCCAACCCCGGATTTTGCA 60.470 50.000 0.73 0.00 34.19 4.08
1046 6283 2.418669 ACTCCTCCTTCCAAGTTCCAA 58.581 47.619 0.00 0.00 0.00 3.53
1047 6284 2.118403 ACTCCTCCTTCCAAGTTCCA 57.882 50.000 0.00 0.00 0.00 3.53
1048 6285 2.640332 AGAACTCCTCCTTCCAAGTTCC 59.360 50.000 9.75 0.00 45.55 3.62
1049 6286 4.041075 AGAAGAACTCCTCCTTCCAAGTTC 59.959 45.833 6.08 6.08 45.04 3.01
1050 6287 3.977326 AGAAGAACTCCTCCTTCCAAGTT 59.023 43.478 0.00 0.00 39.54 2.66
1051 6288 3.592865 AGAAGAACTCCTCCTTCCAAGT 58.407 45.455 0.00 0.00 39.54 3.16
1052 6289 4.285775 AGAAGAAGAACTCCTCCTTCCAAG 59.714 45.833 0.00 0.00 39.54 3.61
1076 6313 4.592192 ATGGCGCCGATGACTCCG 62.592 66.667 23.90 0.00 0.00 4.63
1185 6791 0.036952 AACTCCCTCGAGCACACATG 60.037 55.000 6.99 0.00 40.03 3.21
1186 6792 0.247736 GAACTCCCTCGAGCACACAT 59.752 55.000 6.99 0.00 40.03 3.21
1208 6814 5.211201 TGAGATAGGTGGTCAGATCAATCA 58.789 41.667 0.00 0.00 0.00 2.57
1218 6824 1.471676 CGGTTGCTGAGATAGGTGGTC 60.472 57.143 0.00 0.00 0.00 4.02
1224 6830 1.009829 GGTTGCGGTTGCTGAGATAG 58.990 55.000 0.00 0.00 43.34 2.08
1231 6837 2.542907 CGACAAGGTTGCGGTTGCT 61.543 57.895 0.00 0.00 43.34 3.91
1247 6853 1.227350 CCGATGATCTTGGCTGCGA 60.227 57.895 0.00 0.00 0.00 5.10
1315 8017 5.182001 ACAGCAACATTCTGAATCCTACAAC 59.818 40.000 0.00 0.00 35.61 3.32
1341 8056 3.430790 CGGTCAGTACATCCACATCACAT 60.431 47.826 0.00 0.00 0.00 3.21
1342 8057 2.094234 CGGTCAGTACATCCACATCACA 60.094 50.000 0.00 0.00 0.00 3.58
1343 8058 2.540515 CGGTCAGTACATCCACATCAC 58.459 52.381 0.00 0.00 0.00 3.06
1344 8059 1.480545 CCGGTCAGTACATCCACATCA 59.519 52.381 0.00 0.00 0.00 3.07
1345 8060 1.480954 ACCGGTCAGTACATCCACATC 59.519 52.381 0.00 0.00 0.00 3.06
1346 8061 1.207089 CACCGGTCAGTACATCCACAT 59.793 52.381 2.59 0.00 0.00 3.21
1347 8062 0.606096 CACCGGTCAGTACATCCACA 59.394 55.000 2.59 0.00 0.00 4.17
1348 8063 0.892755 TCACCGGTCAGTACATCCAC 59.107 55.000 2.59 0.00 0.00 4.02
1349 8064 1.860641 ATCACCGGTCAGTACATCCA 58.139 50.000 2.59 0.00 0.00 3.41
1350 8065 2.936498 CAAATCACCGGTCAGTACATCC 59.064 50.000 2.59 0.00 0.00 3.51
1351 8066 2.351726 GCAAATCACCGGTCAGTACATC 59.648 50.000 2.59 0.00 0.00 3.06
1352 8067 2.290008 TGCAAATCACCGGTCAGTACAT 60.290 45.455 2.59 0.00 0.00 2.29
1363 8078 1.168714 GTCCTCCACTGCAAATCACC 58.831 55.000 0.00 0.00 0.00 4.02
1428 8170 2.224450 CCTTAACCGTCACCTTTCCTGT 60.224 50.000 0.00 0.00 0.00 4.00
1445 8187 3.458163 CAGTCCGGCTCGCCCTTA 61.458 66.667 0.00 0.00 0.00 2.69
1487 8241 1.632920 AGCTTCCTCTTCTTCCCAAGG 59.367 52.381 0.00 0.00 0.00 3.61
1546 8300 3.706373 GCGGGCAAGAGAGGTCCA 61.706 66.667 0.00 0.00 0.00 4.02
1597 8354 1.545428 GGTCACCATCTTTGCCTGTCA 60.545 52.381 0.00 0.00 0.00 3.58
1752 8526 1.278699 GGGGCTGATTTGGATTTGCAA 59.721 47.619 0.00 0.00 0.00 4.08
1756 8530 2.906568 ACAAGGGGCTGATTTGGATTT 58.093 42.857 0.00 0.00 0.00 2.17
1760 8534 0.527565 CGAACAAGGGGCTGATTTGG 59.472 55.000 0.00 0.00 0.00 3.28
1763 8537 1.755179 CATCGAACAAGGGGCTGATT 58.245 50.000 0.00 0.00 0.00 2.57
1764 8538 0.749454 GCATCGAACAAGGGGCTGAT 60.749 55.000 0.00 0.00 0.00 2.90
1765 8539 1.377202 GCATCGAACAAGGGGCTGA 60.377 57.895 0.00 0.00 0.00 4.26
1766 8540 2.753966 CGCATCGAACAAGGGGCTG 61.754 63.158 0.00 0.00 0.00 4.85
1767 8541 2.436646 CGCATCGAACAAGGGGCT 60.437 61.111 0.00 0.00 0.00 5.19
1770 8544 0.523968 CAATGCGCATCGAACAAGGG 60.524 55.000 25.53 1.27 0.00 3.95
1771 8545 0.168788 ACAATGCGCATCGAACAAGG 59.831 50.000 25.53 8.32 0.00 3.61
1772 8546 1.906966 GAACAATGCGCATCGAACAAG 59.093 47.619 25.53 10.02 0.00 3.16
1779 8553 2.097954 TCATGAAGGAACAATGCGCATC 59.902 45.455 25.53 12.18 0.00 3.91
1783 8557 4.487948 ACAAATCATGAAGGAACAATGCG 58.512 39.130 0.00 0.00 0.00 4.73
1785 8559 8.084073 ACAACTACAAATCATGAAGGAACAATG 58.916 33.333 0.00 0.00 0.00 2.82
1795 8569 5.814481 TGGATCCACAACTACAAATCATGA 58.186 37.500 11.44 0.00 0.00 3.07
1806 8580 2.031870 TCGATCGATGGATCCACAACT 58.968 47.619 18.99 0.00 45.16 3.16
1810 8584 2.732412 ATGTCGATCGATGGATCCAC 57.268 50.000 22.50 10.34 45.16 4.02
1817 8591 5.371629 CATGAATGTCAATGTCGATCGATG 58.628 41.667 22.50 15.68 0.00 3.84
1827 8601 4.109766 GCATCACACCATGAATGTCAATG 58.890 43.478 0.00 6.04 41.93 2.82
1830 8604 1.738908 CGCATCACACCATGAATGTCA 59.261 47.619 0.00 0.00 41.93 3.58
1833 8607 0.452585 TGCGCATCACACCATGAATG 59.547 50.000 5.66 0.00 41.93 2.67
1836 8617 1.746239 CCTGCGCATCACACCATGA 60.746 57.895 12.24 0.00 43.13 3.07
2139 9101 4.077184 CACGCCTACGGGGAAGCA 62.077 66.667 3.82 0.00 46.04 3.91
2177 9158 7.009568 AGAAATCTTAGACATGCATTTCGAC 57.990 36.000 7.19 0.00 38.14 4.20
2182 9163 7.951347 AGGAAAGAAATCTTAGACATGCATT 57.049 32.000 0.00 0.00 34.61 3.56
2183 9164 9.064706 CATAGGAAAGAAATCTTAGACATGCAT 57.935 33.333 0.00 0.00 34.61 3.96
2185 9166 7.716998 TCCATAGGAAAGAAATCTTAGACATGC 59.283 37.037 0.00 0.00 34.61 4.06
2198 9196 2.356125 GCAGCCACTCCATAGGAAAGAA 60.356 50.000 0.00 0.00 0.00 2.52
2206 9204 1.345741 GATAGCAGCAGCCACTCCATA 59.654 52.381 0.00 0.00 43.56 2.74
2212 9210 3.418714 GCAGATAGCAGCAGCCAC 58.581 61.111 0.00 0.00 44.79 5.01
2273 9271 6.034363 CGCATAATAAGATCTCTGATGAACGG 59.966 42.308 0.00 0.00 0.00 4.44
2305 9303 8.577296 TCCACGGAGAATAATATCTCTAACAAG 58.423 37.037 4.50 0.00 44.30 3.16
2326 9324 3.634568 TTTACCTGCAAATGTTCCACG 57.365 42.857 0.00 0.00 0.00 4.94
2329 9327 6.183360 GGAGTAGATTTACCTGCAAATGTTCC 60.183 42.308 0.00 0.00 0.00 3.62
2381 9587 2.847234 TGCCGACCCAGTTGAGGT 60.847 61.111 0.00 0.00 41.50 3.85
2385 9591 4.722700 CCCCTGCCGACCCAGTTG 62.723 72.222 0.00 0.00 0.00 3.16
2396 9602 0.962356 CACAATGACAGACCCCCTGC 60.962 60.000 0.00 0.00 46.81 4.85
2399 9605 1.678970 GGCACAATGACAGACCCCC 60.679 63.158 0.00 0.00 0.00 5.40
2400 9606 2.040544 CGGCACAATGACAGACCCC 61.041 63.158 0.00 0.00 0.00 4.95
2402 9608 0.884704 ACACGGCACAATGACAGACC 60.885 55.000 0.00 0.00 0.00 3.85
2405 9611 1.229428 AGAACACGGCACAATGACAG 58.771 50.000 0.00 0.00 0.00 3.51
2409 9615 2.036556 GTGAAGAACACGGCACAATG 57.963 50.000 0.00 0.00 39.78 2.82
2419 9625 5.466728 GCATCTAGACAAACTGTGAAGAACA 59.533 40.000 0.00 0.00 37.22 3.18
2420 9626 5.698545 AGCATCTAGACAAACTGTGAAGAAC 59.301 40.000 0.00 0.00 0.00 3.01
2421 9627 5.698089 CAGCATCTAGACAAACTGTGAAGAA 59.302 40.000 0.00 0.00 0.00 2.52
2422 9628 5.233225 CAGCATCTAGACAAACTGTGAAGA 58.767 41.667 0.00 0.00 0.00 2.87
2423 9629 4.142945 GCAGCATCTAGACAAACTGTGAAG 60.143 45.833 0.00 0.00 0.00 3.02
2424 9630 3.748048 GCAGCATCTAGACAAACTGTGAA 59.252 43.478 0.00 0.00 0.00 3.18
2425 9631 3.329386 GCAGCATCTAGACAAACTGTGA 58.671 45.455 0.00 0.00 0.00 3.58
2428 11089 2.676839 CTGGCAGCATCTAGACAAACTG 59.323 50.000 0.00 1.69 0.00 3.16
2448 11109 4.017683 AGAAAATCTGAGCCTGGAATTCCT 60.018 41.667 24.73 4.76 36.82 3.36
2449 11110 4.276642 AGAAAATCTGAGCCTGGAATTCC 58.723 43.478 18.17 18.17 0.00 3.01
2450 11111 5.298026 GGTAGAAAATCTGAGCCTGGAATTC 59.702 44.000 0.00 0.00 0.00 2.17
2451 11112 5.196695 GGTAGAAAATCTGAGCCTGGAATT 58.803 41.667 0.00 0.00 0.00 2.17
2452 11113 4.385754 GGGTAGAAAATCTGAGCCTGGAAT 60.386 45.833 0.00 0.00 0.00 3.01
2453 11114 3.054361 GGGTAGAAAATCTGAGCCTGGAA 60.054 47.826 0.00 0.00 0.00 3.53
2454 11115 2.505819 GGGTAGAAAATCTGAGCCTGGA 59.494 50.000 0.00 0.00 0.00 3.86
2455 11116 2.743183 CGGGTAGAAAATCTGAGCCTGG 60.743 54.545 0.00 0.00 0.00 4.45
2456 11117 2.168521 TCGGGTAGAAAATCTGAGCCTG 59.831 50.000 0.00 0.00 0.00 4.85
2481 11142 7.951347 AGAGAACTAACCTTTCGTATAAGGA 57.049 36.000 16.69 0.12 46.28 3.36
2491 11152 8.897872 TTCATAACGAAAGAGAACTAACCTTT 57.102 30.769 0.00 0.00 33.32 3.11
2498 11194 8.882415 TTGTAGTTTCATAACGAAAGAGAACT 57.118 30.769 0.00 0.00 44.26 3.01
2508 11204 5.699458 AGGGTGTTCTTGTAGTTTCATAACG 59.301 40.000 0.00 0.00 39.31 3.18
2518 11214 2.736144 TACGCAGGGTGTTCTTGTAG 57.264 50.000 0.00 0.00 0.00 2.74
2519 11215 3.395639 CTTTACGCAGGGTGTTCTTGTA 58.604 45.455 0.00 0.00 0.00 2.41
2520 11216 2.218603 CTTTACGCAGGGTGTTCTTGT 58.781 47.619 0.00 0.00 0.00 3.16
2523 11219 1.053424 TCCTTTACGCAGGGTGTTCT 58.947 50.000 0.00 0.00 34.24 3.01
2536 11232 8.478877 TGGTTTGCAGTAAAGAATTTTCCTTTA 58.521 29.630 0.00 0.00 40.09 1.85
2537 11233 7.334858 TGGTTTGCAGTAAAGAATTTTCCTTT 58.665 30.769 0.00 0.00 40.09 3.11
2540 11250 7.546778 TTTGGTTTGCAGTAAAGAATTTTCC 57.453 32.000 0.00 0.00 40.09 3.13
2546 11256 7.946207 TCATGTATTTGGTTTGCAGTAAAGAA 58.054 30.769 0.00 0.00 0.00 2.52
2550 11260 7.721402 AGTTTCATGTATTTGGTTTGCAGTAA 58.279 30.769 0.00 0.00 0.00 2.24
2551 11261 7.230510 AGAGTTTCATGTATTTGGTTTGCAGTA 59.769 33.333 0.00 0.00 0.00 2.74
2564 11274 5.013079 TGAAGTGTGGGAGAGTTTCATGTAT 59.987 40.000 0.00 0.00 0.00 2.29
2572 11282 1.807814 AGGTGAAGTGTGGGAGAGTT 58.192 50.000 0.00 0.00 0.00 3.01
2573 11283 2.696526 TAGGTGAAGTGTGGGAGAGT 57.303 50.000 0.00 0.00 0.00 3.24
2574 11284 4.223923 AGAAATAGGTGAAGTGTGGGAGAG 59.776 45.833 0.00 0.00 0.00 3.20
2575 11285 4.168101 AGAAATAGGTGAAGTGTGGGAGA 58.832 43.478 0.00 0.00 0.00 3.71
2581 11292 9.793259 TTTGAGAAATAGAAATAGGTGAAGTGT 57.207 29.630 0.00 0.00 0.00 3.55
2613 11324 9.196552 CTTCAGTTCAGTTCAGTTTTTCTTTTT 57.803 29.630 0.00 0.00 0.00 1.94
2614 11325 8.576442 TCTTCAGTTCAGTTCAGTTTTTCTTTT 58.424 29.630 0.00 0.00 0.00 2.27
2615 11326 8.110860 TCTTCAGTTCAGTTCAGTTTTTCTTT 57.889 30.769 0.00 0.00 0.00 2.52
2616 11327 7.687941 TCTTCAGTTCAGTTCAGTTTTTCTT 57.312 32.000 0.00 0.00 0.00 2.52
2617 11328 7.687941 TTCTTCAGTTCAGTTCAGTTTTTCT 57.312 32.000 0.00 0.00 0.00 2.52
2618 11329 9.439537 GTATTCTTCAGTTCAGTTCAGTTTTTC 57.560 33.333 0.00 0.00 0.00 2.29
2619 11330 9.178758 AGTATTCTTCAGTTCAGTTCAGTTTTT 57.821 29.630 0.00 0.00 0.00 1.94
2620 11331 8.738645 AGTATTCTTCAGTTCAGTTCAGTTTT 57.261 30.769 0.00 0.00 0.00 2.43
2621 11332 7.987458 TGAGTATTCTTCAGTTCAGTTCAGTTT 59.013 33.333 0.00 0.00 0.00 2.66
2622 11333 7.439655 GTGAGTATTCTTCAGTTCAGTTCAGTT 59.560 37.037 0.00 0.00 0.00 3.16
2623 11334 6.926272 GTGAGTATTCTTCAGTTCAGTTCAGT 59.074 38.462 0.00 0.00 0.00 3.41
2624 11335 6.925718 TGTGAGTATTCTTCAGTTCAGTTCAG 59.074 38.462 0.00 0.00 0.00 3.02
2625 11336 6.816136 TGTGAGTATTCTTCAGTTCAGTTCA 58.184 36.000 0.00 0.00 0.00 3.18
2626 11337 7.715265 TTGTGAGTATTCTTCAGTTCAGTTC 57.285 36.000 0.00 0.00 0.00 3.01
2627 11338 7.012421 GGTTTGTGAGTATTCTTCAGTTCAGTT 59.988 37.037 0.00 0.00 0.00 3.16
2628 11339 6.483640 GGTTTGTGAGTATTCTTCAGTTCAGT 59.516 38.462 0.00 0.00 0.00 3.41
2636 11347 4.394729 TGGTGGGTTTGTGAGTATTCTTC 58.605 43.478 0.00 0.00 0.00 2.87
2643 11354 3.810743 GCTTATCTGGTGGGTTTGTGAGT 60.811 47.826 0.00 0.00 0.00 3.41
2661 11372 6.206438 TGCATACTGTTTTTCATGTCTGCTTA 59.794 34.615 0.00 0.00 33.38 3.09
2733 11447 2.033801 GGAATTTGTGATGGATCTGGCG 59.966 50.000 0.00 0.00 0.00 5.69
2809 11527 4.387256 GGAAAAGATCTTGTCAGTCAGTCG 59.613 45.833 24.03 0.00 0.00 4.18
2882 11600 5.514500 TTTTCTTCATTGCCCTACTACCT 57.486 39.130 0.00 0.00 0.00 3.08
3241 11959 3.547613 CCGAAATACCTTCCGACGTAGAG 60.548 52.174 0.00 0.00 0.00 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.