Multiple sequence alignment - TraesCS7D01G138800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G138800 chr7D 100.000 4451 0 0 661 5111 88897881 88902331 0.000000e+00 8220.0
1 TraesCS7D01G138800 chr7D 77.396 1398 252 42 1187 2557 88133368 88134728 0.000000e+00 773.0
2 TraesCS7D01G138800 chr7D 77.169 1406 254 43 1187 2557 88180201 88178828 0.000000e+00 756.0
3 TraesCS7D01G138800 chr7D 77.154 998 164 33 1159 2135 89232383 89233337 5.860000e-144 521.0
4 TraesCS7D01G138800 chr7D 91.967 361 19 5 2396 2747 413240962 413240603 9.880000e-137 497.0
5 TraesCS7D01G138800 chr7D 79.407 641 117 8 1171 1799 88370794 88370157 6.080000e-119 438.0
6 TraesCS7D01G138800 chr7D 78.857 700 98 35 1886 2554 89228671 89229351 1.320000e-115 427.0
7 TraesCS7D01G138800 chr7D 76.174 894 153 42 1156 2030 89211933 89212785 2.850000e-112 416.0
8 TraesCS7D01G138800 chr7D 78.471 641 106 18 1157 1772 88988417 88989050 1.730000e-104 390.0
9 TraesCS7D01G138800 chr7D 76.667 720 131 30 1083 1776 89016926 89017634 1.050000e-96 364.0
10 TraesCS7D01G138800 chr7D 77.535 641 113 20 1159 1776 89227989 89228621 1.750000e-94 357.0
11 TraesCS7D01G138800 chr7D 100.000 151 0 0 1 151 88897221 88897371 3.900000e-71 279.0
12 TraesCS7D01G138800 chr7D 77.299 511 89 20 1198 1690 88078641 88079142 5.040000e-70 276.0
13 TraesCS7D01G138800 chr7D 94.012 167 10 0 2581 2747 413240081 413240247 2.360000e-63 254.0
14 TraesCS7D01G138800 chr7D 76.048 501 98 16 1198 1690 88018728 88019214 1.840000e-59 241.0
15 TraesCS7D01G138800 chr7D 89.256 121 12 1 3484 3603 46806819 46806699 3.190000e-32 150.0
16 TraesCS7D01G138800 chr7D 82.667 150 25 1 1900 2049 88989213 88989361 1.150000e-26 132.0
17 TraesCS7D01G138800 chr7D 81.081 148 21 4 1904 2049 89065876 89066018 1.500000e-20 111.0
18 TraesCS7D01G138800 chr7D 83.333 120 7 6 821 937 42906558 42906667 1.170000e-16 99.0
19 TraesCS7D01G138800 chr7A 90.922 2170 123 19 957 3077 90335515 90337659 0.000000e+00 2848.0
20 TraesCS7D01G138800 chr7A 92.857 952 37 11 3360 4284 90338811 90339758 0.000000e+00 1352.0
21 TraesCS7D01G138800 chr7A 91.849 503 34 5 4614 5111 90345111 90345611 0.000000e+00 695.0
22 TraesCS7D01G138800 chr7A 88.732 497 36 11 2396 2875 143097811 143097318 1.580000e-164 590.0
23 TraesCS7D01G138800 chr7A 79.756 657 114 11 1162 1804 89974451 89975102 4.660000e-125 459.0
24 TraesCS7D01G138800 chr7A 78.551 690 124 17 1175 1857 89758607 89759279 2.830000e-117 433.0
25 TraesCS7D01G138800 chr7A 79.173 629 100 24 1162 1776 90443827 90444438 1.710000e-109 407.0
26 TraesCS7D01G138800 chr7A 75.873 659 126 24 1919 2556 89781377 89782023 6.430000e-79 305.0
27 TraesCS7D01G138800 chr7A 93.913 115 7 0 4293 4407 90339992 90340106 1.890000e-39 174.0
28 TraesCS7D01G138800 chr7A 80.228 263 27 10 3484 3721 535468567 535468305 1.890000e-39 174.0
29 TraesCS7D01G138800 chr7A 92.308 117 9 0 821 937 159724748 159724864 3.170000e-37 167.0
30 TraesCS7D01G138800 chr7A 90.598 117 11 0 821 937 694501678 694501562 6.850000e-34 156.0
31 TraesCS7D01G138800 chr7A 90.598 117 10 1 4383 4499 90344561 90344676 2.460000e-33 154.0
32 TraesCS7D01G138800 chr7A 82.394 142 23 2 2428 2568 90029515 90029655 6.950000e-24 122.0
33 TraesCS7D01G138800 chr7A 96.774 62 1 1 3080 3140 90337989 90338050 9.050000e-18 102.0
34 TraesCS7D01G138800 chr7A 97.917 48 1 0 3302 3349 90338059 90338106 3.280000e-12 84.2
35 TraesCS7D01G138800 chr7B 90.419 2004 133 18 1010 2984 39619126 39617153 0.000000e+00 2582.0
36 TraesCS7D01G138800 chr7B 87.607 468 32 12 3764 4228 39614818 39614374 2.110000e-143 520.0
37 TraesCS7D01G138800 chr7B 80.335 656 112 10 1162 1804 38783110 38783761 9.950000e-132 481.0
38 TraesCS7D01G138800 chr7B 83.071 508 59 17 3287 3776 39615501 39615003 2.190000e-118 436.0
39 TraesCS7D01G138800 chr7B 79.258 593 89 20 1156 1722 39547463 39548047 2.890000e-102 383.0
40 TraesCS7D01G138800 chr7B 75.635 591 85 31 4550 5111 39613882 39613322 6.610000e-59 239.0
41 TraesCS7D01G138800 chr7B 79.239 289 53 4 2276 2557 37421952 37421664 1.450000e-45 195.0
42 TraesCS7D01G138800 chr7B 83.590 195 25 6 1882 2075 40154636 40154824 5.260000e-40 176.0
43 TraesCS7D01G138800 chr7B 80.153 262 28 13 3478 3715 496342658 496342919 1.890000e-39 174.0
44 TraesCS7D01G138800 chr7B 85.185 135 20 0 1915 2049 39548292 39548426 6.900000e-29 139.0
45 TraesCS7D01G138800 chr7B 89.796 98 8 2 3192 3287 536662525 536662428 1.930000e-24 124.0
46 TraesCS7D01G138800 chr7B 90.217 92 9 0 1958 2049 39980836 39980927 2.500000e-23 121.0
47 TraesCS7D01G138800 chr7B 93.590 78 5 0 2606 2683 40155559 40155636 3.230000e-22 117.0
48 TraesCS7D01G138800 chr7B 80.405 148 22 4 1904 2049 39959979 39960121 7.000000e-19 106.0
49 TraesCS7D01G138800 chr7B 92.982 57 4 0 2625 2681 40090512 40090568 3.280000e-12 84.2
50 TraesCS7D01G138800 chr7B 100.000 32 0 0 958 989 39619159 39619128 5.530000e-05 60.2
51 TraesCS7D01G138800 chr7B 100.000 31 0 0 2196 2226 39918116 39918146 1.990000e-04 58.4
52 TraesCS7D01G138800 chr7B 100.000 29 0 0 2198 2226 39548512 39548540 3.000000e-03 54.7
53 TraesCS7D01G138800 chr5B 87.625 501 30 17 2396 2875 408953961 408954450 2.080000e-153 553.0
54 TraesCS7D01G138800 chr5B 88.281 128 14 1 3477 3603 348380531 348380658 8.860000e-33 152.0
55 TraesCS7D01G138800 chr5B 94.318 88 5 0 3200 3287 83789839 83789752 8.930000e-28 135.0
56 TraesCS7D01G138800 chr5B 86.239 109 14 1 3186 3294 253207177 253207070 3.230000e-22 117.0
57 TraesCS7D01G138800 chr3B 95.575 113 3 2 821 932 739510379 739510490 4.070000e-41 180.0
58 TraesCS7D01G138800 chr3B 82.500 200 33 2 4225 4423 130096327 130096129 1.890000e-39 174.0
59 TraesCS7D01G138800 chr3B 86.239 109 14 1 3186 3294 427633836 427633729 3.230000e-22 117.0
60 TraesCS7D01G138800 chr3B 100.000 29 0 0 87 115 188026349 188026377 3.000000e-03 54.7
61 TraesCS7D01G138800 chr6A 80.385 260 27 9 3479 3714 24080646 24080905 5.260000e-40 176.0
62 TraesCS7D01G138800 chr2D 79.771 262 29 10 3478 3715 395940194 395940455 8.800000e-38 169.0
63 TraesCS7D01G138800 chr2D 100.000 31 0 0 85 115 456332969 456332939 1.990000e-04 58.4
64 TraesCS7D01G138800 chrUn 80.995 221 32 9 4226 4441 227957232 227957017 3.170000e-37 167.0
65 TraesCS7D01G138800 chr2B 90.598 117 11 0 821 937 731345600 731345484 6.850000e-34 156.0
66 TraesCS7D01G138800 chr2B 89.796 98 10 0 3193 3290 788199840 788199743 5.370000e-25 126.0
67 TraesCS7D01G138800 chr4A 78.339 277 32 13 3466 3716 63122803 63122529 2.460000e-33 154.0
68 TraesCS7D01G138800 chr4A 88.462 52 3 2 4908 4959 593457524 593457476 5.530000e-05 60.2
69 TraesCS7D01G138800 chr4A 86.538 52 4 2 4908 4959 596296750 596296702 3.000000e-03 54.7
70 TraesCS7D01G138800 chr2A 89.565 115 12 0 823 937 699866586 699866700 4.120000e-31 147.0
71 TraesCS7D01G138800 chr2A 93.478 92 6 0 3196 3287 15846306 15846397 2.480000e-28 137.0
72 TraesCS7D01G138800 chr2A 91.579 95 8 0 3196 3290 8356054 8355960 1.150000e-26 132.0
73 TraesCS7D01G138800 chr6B 77.912 249 44 8 3482 3722 221395244 221394999 1.480000e-30 145.0
74 TraesCS7D01G138800 chr6B 94.382 89 4 1 3199 3287 398109090 398109003 8.930000e-28 135.0
75 TraesCS7D01G138800 chr6B 94.382 89 4 1 3199 3287 398339222 398339135 8.930000e-28 135.0
76 TraesCS7D01G138800 chr6B 88.776 98 9 2 3190 3287 411238858 411238763 8.990000e-23 119.0
77 TraesCS7D01G138800 chr6B 92.857 42 3 0 823 864 703357287 703357246 1.540000e-05 62.1
78 TraesCS7D01G138800 chr1D 94.318 88 5 0 3203 3290 471286120 471286033 8.930000e-28 135.0
79 TraesCS7D01G138800 chr1D 90.000 100 10 0 3188 3287 104427155 104427254 4.150000e-26 130.0
80 TraesCS7D01G138800 chr1B 95.349 86 3 1 3203 3287 586295823 586295738 8.930000e-28 135.0
81 TraesCS7D01G138800 chr1B 92.391 92 7 0 3196 3287 611132934 611133025 1.150000e-26 132.0
82 TraesCS7D01G138800 chr3A 77.606 259 31 16 3484 3716 346171933 346172190 1.150000e-26 132.0
83 TraesCS7D01G138800 chr5D 91.579 95 7 1 3194 3287 223649884 223649978 4.150000e-26 130.0
84 TraesCS7D01G138800 chr4D 88.889 99 11 0 3193 3291 109272511 109272609 6.950000e-24 122.0
85 TraesCS7D01G138800 chr4D 86.111 108 15 0 3180 3287 462654087 462654194 3.230000e-22 117.0
86 TraesCS7D01G138800 chr6D 94.000 50 2 1 1314 1362 449122173 449122222 1.970000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G138800 chr7D 88897221 88902331 5110 False 4249.50 8220 100.000000 1 5111 2 chr7D.!!$F9 5110
1 TraesCS7D01G138800 chr7D 88133368 88134728 1360 False 773.00 773 77.396000 1187 2557 1 chr7D.!!$F4 1370
2 TraesCS7D01G138800 chr7D 88178828 88180201 1373 True 756.00 756 77.169000 1187 2557 1 chr7D.!!$R2 1370
3 TraesCS7D01G138800 chr7D 88370157 88370794 637 True 438.00 438 79.407000 1171 1799 1 chr7D.!!$R3 628
4 TraesCS7D01G138800 chr7D 89227989 89233337 5348 False 435.00 521 77.848667 1159 2554 3 chr7D.!!$F11 1395
5 TraesCS7D01G138800 chr7D 89211933 89212785 852 False 416.00 416 76.174000 1156 2030 1 chr7D.!!$F7 874
6 TraesCS7D01G138800 chr7D 89016926 89017634 708 False 364.00 364 76.667000 1083 1776 1 chr7D.!!$F5 693
7 TraesCS7D01G138800 chr7D 88078641 88079142 501 False 276.00 276 77.299000 1198 1690 1 chr7D.!!$F3 492
8 TraesCS7D01G138800 chr7D 88988417 88989361 944 False 261.00 390 80.569000 1157 2049 2 chr7D.!!$F10 892
9 TraesCS7D01G138800 chr7A 90335515 90340106 4591 False 912.04 2848 94.476600 957 4407 5 chr7A.!!$F7 3450
10 TraesCS7D01G138800 chr7A 89974451 89975102 651 False 459.00 459 79.756000 1162 1804 1 chr7A.!!$F3 642
11 TraesCS7D01G138800 chr7A 89758607 89759279 672 False 433.00 433 78.551000 1175 1857 1 chr7A.!!$F1 682
12 TraesCS7D01G138800 chr7A 90344561 90345611 1050 False 424.50 695 91.223500 4383 5111 2 chr7A.!!$F8 728
13 TraesCS7D01G138800 chr7A 90443827 90444438 611 False 407.00 407 79.173000 1162 1776 1 chr7A.!!$F5 614
14 TraesCS7D01G138800 chr7A 89781377 89782023 646 False 305.00 305 75.873000 1919 2556 1 chr7A.!!$F2 637
15 TraesCS7D01G138800 chr7B 39613322 39619159 5837 True 767.44 2582 87.346400 958 5111 5 chr7B.!!$R3 4153
16 TraesCS7D01G138800 chr7B 38783110 38783761 651 False 481.00 481 80.335000 1162 1804 1 chr7B.!!$F1 642

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
812 813 0.115745 ACCTAGAAGTGTCCCGGGAA 59.884 55.000 28.84 13.36 0.00 3.97 F
953 954 0.306840 CATTCGCCTGCATAGCACTG 59.693 55.000 9.30 0.27 33.79 3.66 F
1986 6507 0.034059 CATGGATCCCTGCGTCTACC 59.966 60.000 9.90 0.00 0.00 3.18 F
2467 7023 2.038975 TTCTCCCTGGGCTACGCT 59.961 61.111 8.22 0.00 0.00 5.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1934 6439 0.039798 CAACAGCAACATGAGCGCTT 60.040 50.000 13.26 0.00 37.01 4.68 R
2797 7370 0.179100 CGACGAGTCATCTGGCCAAT 60.179 55.000 7.01 0.08 0.00 3.16 R
2859 7432 1.150081 GGATCATCTGCTGGGTGGG 59.850 63.158 0.00 0.00 0.00 4.61 R
4407 11589 2.494158 TCTAGGCCCAGTCTAGAGAGT 58.506 52.381 0.00 0.00 41.23 3.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.639632 CCTTTTGTTCATCTTCTTCCTTGA 57.360 37.500 0.00 0.00 0.00 3.02
24 25 7.042797 CCTTTTGTTCATCTTCTTCCTTGAA 57.957 36.000 0.00 0.00 0.00 2.69
25 26 7.664758 CCTTTTGTTCATCTTCTTCCTTGAAT 58.335 34.615 0.00 0.00 31.39 2.57
26 27 7.811713 CCTTTTGTTCATCTTCTTCCTTGAATC 59.188 37.037 0.00 0.00 31.39 2.52
27 28 6.824305 TTGTTCATCTTCTTCCTTGAATCC 57.176 37.500 0.00 0.00 31.39 3.01
28 29 5.879763 TGTTCATCTTCTTCCTTGAATCCA 58.120 37.500 0.00 0.00 31.39 3.41
29 30 5.707298 TGTTCATCTTCTTCCTTGAATCCAC 59.293 40.000 0.00 0.00 31.39 4.02
30 31 4.848357 TCATCTTCTTCCTTGAATCCACC 58.152 43.478 0.00 0.00 0.00 4.61
31 32 3.721087 TCTTCTTCCTTGAATCCACCC 57.279 47.619 0.00 0.00 0.00 4.61
32 33 2.308866 TCTTCTTCCTTGAATCCACCCC 59.691 50.000 0.00 0.00 0.00 4.95
33 34 1.753903 TCTTCCTTGAATCCACCCCA 58.246 50.000 0.00 0.00 0.00 4.96
34 35 1.354368 TCTTCCTTGAATCCACCCCAC 59.646 52.381 0.00 0.00 0.00 4.61
35 36 1.075374 CTTCCTTGAATCCACCCCACA 59.925 52.381 0.00 0.00 0.00 4.17
36 37 1.381867 TCCTTGAATCCACCCCACAT 58.618 50.000 0.00 0.00 0.00 3.21
37 38 2.567862 TCCTTGAATCCACCCCACATA 58.432 47.619 0.00 0.00 0.00 2.29
38 39 2.241176 TCCTTGAATCCACCCCACATAC 59.759 50.000 0.00 0.00 0.00 2.39
39 40 2.654863 CTTGAATCCACCCCACATACC 58.345 52.381 0.00 0.00 0.00 2.73
40 41 1.675007 TGAATCCACCCCACATACCA 58.325 50.000 0.00 0.00 0.00 3.25
41 42 1.283613 TGAATCCACCCCACATACCAC 59.716 52.381 0.00 0.00 0.00 4.16
42 43 0.629058 AATCCACCCCACATACCACC 59.371 55.000 0.00 0.00 0.00 4.61
43 44 0.551377 ATCCACCCCACATACCACCA 60.551 55.000 0.00 0.00 0.00 4.17
44 45 1.204786 TCCACCCCACATACCACCAG 61.205 60.000 0.00 0.00 0.00 4.00
45 46 1.378514 CACCCCACATACCACCAGC 60.379 63.158 0.00 0.00 0.00 4.85
46 47 2.275418 CCCCACATACCACCAGCC 59.725 66.667 0.00 0.00 0.00 4.85
47 48 2.275418 CCCACATACCACCAGCCC 59.725 66.667 0.00 0.00 0.00 5.19
48 49 2.275418 CCACATACCACCAGCCCC 59.725 66.667 0.00 0.00 0.00 5.80
49 50 2.275418 CACATACCACCAGCCCCC 59.725 66.667 0.00 0.00 0.00 5.40
50 51 3.407967 ACATACCACCAGCCCCCG 61.408 66.667 0.00 0.00 0.00 5.73
51 52 4.875713 CATACCACCAGCCCCCGC 62.876 72.222 0.00 0.00 0.00 6.13
71 72 3.787001 CCCGCCCTTCCCTCAGTC 61.787 72.222 0.00 0.00 0.00 3.51
72 73 4.148825 CCGCCCTTCCCTCAGTCG 62.149 72.222 0.00 0.00 0.00 4.18
73 74 4.821589 CGCCCTTCCCTCAGTCGC 62.822 72.222 0.00 0.00 0.00 5.19
74 75 4.475135 GCCCTTCCCTCAGTCGCC 62.475 72.222 0.00 0.00 0.00 5.54
75 76 4.148825 CCCTTCCCTCAGTCGCCG 62.149 72.222 0.00 0.00 0.00 6.46
76 77 4.821589 CCTTCCCTCAGTCGCCGC 62.822 72.222 0.00 0.00 0.00 6.53
77 78 3.764466 CTTCCCTCAGTCGCCGCT 61.764 66.667 0.00 0.00 0.00 5.52
78 79 3.708220 CTTCCCTCAGTCGCCGCTC 62.708 68.421 0.00 0.00 0.00 5.03
87 88 3.506096 TCGCCGCTCCGACTAGTG 61.506 66.667 0.00 0.00 31.36 2.74
90 91 4.554363 CCGCTCCGACTAGTGGCG 62.554 72.222 16.80 16.80 40.12 5.69
112 113 3.282885 GAGCTTGGTAAGATCCTTTGGG 58.717 50.000 0.00 0.00 37.96 4.12
113 114 2.024941 AGCTTGGTAAGATCCTTTGGGG 60.025 50.000 0.00 0.00 0.00 4.96
114 115 2.950418 GCTTGGTAAGATCCTTTGGGGG 60.950 54.545 0.00 0.00 35.33 5.40
115 116 0.629058 TGGTAAGATCCTTTGGGGGC 59.371 55.000 0.00 0.00 35.33 5.80
116 117 0.465642 GGTAAGATCCTTTGGGGGCG 60.466 60.000 0.00 0.00 35.33 6.13
117 118 0.465642 GTAAGATCCTTTGGGGGCGG 60.466 60.000 0.00 0.00 35.33 6.13
118 119 0.917333 TAAGATCCTTTGGGGGCGGT 60.917 55.000 0.00 0.00 35.33 5.68
119 120 2.440247 GATCCTTTGGGGGCGGTG 60.440 66.667 0.00 0.00 35.33 4.94
120 121 4.060667 ATCCTTTGGGGGCGGTGG 62.061 66.667 0.00 0.00 35.33 4.61
123 124 4.278513 CTTTGGGGGCGGTGGTGA 62.279 66.667 0.00 0.00 0.00 4.02
124 125 4.278513 TTTGGGGGCGGTGGTGAG 62.279 66.667 0.00 0.00 0.00 3.51
686 687 4.135153 GCTTCTCCAGCGAGCCGA 62.135 66.667 0.00 0.00 39.29 5.54
687 688 2.202676 CTTCTCCAGCGAGCCGAC 60.203 66.667 0.00 0.00 35.94 4.79
688 689 4.116328 TTCTCCAGCGAGCCGACG 62.116 66.667 0.00 0.00 35.94 5.12
702 703 4.516195 GACGGCCGCTCCTTCCTC 62.516 72.222 28.58 8.97 0.00 3.71
717 718 3.365265 CTCCGGCGGCTGCTTTTT 61.365 61.111 23.83 0.00 42.25 1.94
740 741 5.873179 TCATGTGAAAAATCGACTAACCC 57.127 39.130 0.00 0.00 0.00 4.11
741 742 5.309638 TCATGTGAAAAATCGACTAACCCA 58.690 37.500 0.00 0.00 0.00 4.51
742 743 5.765677 TCATGTGAAAAATCGACTAACCCAA 59.234 36.000 0.00 0.00 0.00 4.12
743 744 6.263392 TCATGTGAAAAATCGACTAACCCAAA 59.737 34.615 0.00 0.00 0.00 3.28
744 745 6.642707 TGTGAAAAATCGACTAACCCAAAT 57.357 33.333 0.00 0.00 0.00 2.32
745 746 7.747155 TGTGAAAAATCGACTAACCCAAATA 57.253 32.000 0.00 0.00 0.00 1.40
746 747 8.343168 TGTGAAAAATCGACTAACCCAAATAT 57.657 30.769 0.00 0.00 0.00 1.28
747 748 8.798402 TGTGAAAAATCGACTAACCCAAATATT 58.202 29.630 0.00 0.00 0.00 1.28
754 755 9.635404 AATCGACTAACCCAAATATTATTTCCA 57.365 29.630 0.00 0.00 0.00 3.53
755 756 8.671384 TCGACTAACCCAAATATTATTTCCAG 57.329 34.615 0.00 0.00 0.00 3.86
756 757 8.269317 TCGACTAACCCAAATATTATTTCCAGT 58.731 33.333 0.00 0.00 0.00 4.00
757 758 8.557029 CGACTAACCCAAATATTATTTCCAGTC 58.443 37.037 0.00 6.79 0.00 3.51
758 759 9.403583 GACTAACCCAAATATTATTTCCAGTCA 57.596 33.333 0.00 0.00 0.00 3.41
759 760 9.762381 ACTAACCCAAATATTATTTCCAGTCAA 57.238 29.630 0.00 0.00 0.00 3.18
761 762 8.664669 AACCCAAATATTATTTCCAGTCAACT 57.335 30.769 0.00 0.00 0.00 3.16
762 763 8.066612 ACCCAAATATTATTTCCAGTCAACTG 57.933 34.615 3.08 3.08 43.40 3.16
784 785 6.783708 TGGAAGTTTTACATTGAAACACCT 57.216 33.333 12.95 0.00 38.99 4.00
785 786 6.801575 TGGAAGTTTTACATTGAAACACCTC 58.198 36.000 12.95 4.16 38.99 3.85
786 787 6.378564 TGGAAGTTTTACATTGAAACACCTCA 59.621 34.615 12.95 0.00 38.99 3.86
787 788 6.695713 GGAAGTTTTACATTGAAACACCTCAC 59.304 38.462 3.01 0.00 38.99 3.51
788 789 6.767524 AGTTTTACATTGAAACACCTCACA 57.232 33.333 3.01 0.00 38.99 3.58
789 790 7.164230 AGTTTTACATTGAAACACCTCACAA 57.836 32.000 3.01 0.00 38.99 3.33
790 791 7.607250 AGTTTTACATTGAAACACCTCACAAA 58.393 30.769 3.01 0.00 38.99 2.83
791 792 8.091449 AGTTTTACATTGAAACACCTCACAAAA 58.909 29.630 3.01 0.00 38.99 2.44
792 793 7.820044 TTTACATTGAAACACCTCACAAAAC 57.180 32.000 0.00 0.00 0.00 2.43
793 794 5.398603 ACATTGAAACACCTCACAAAACA 57.601 34.783 0.00 0.00 0.00 2.83
794 795 5.167845 ACATTGAAACACCTCACAAAACAC 58.832 37.500 0.00 0.00 0.00 3.32
795 796 3.859411 TGAAACACCTCACAAAACACC 57.141 42.857 0.00 0.00 0.00 4.16
796 797 3.426615 TGAAACACCTCACAAAACACCT 58.573 40.909 0.00 0.00 0.00 4.00
797 798 4.590918 TGAAACACCTCACAAAACACCTA 58.409 39.130 0.00 0.00 0.00 3.08
798 799 4.638421 TGAAACACCTCACAAAACACCTAG 59.362 41.667 0.00 0.00 0.00 3.02
799 800 4.497291 AACACCTCACAAAACACCTAGA 57.503 40.909 0.00 0.00 0.00 2.43
800 801 4.497291 ACACCTCACAAAACACCTAGAA 57.503 40.909 0.00 0.00 0.00 2.10
801 802 4.451900 ACACCTCACAAAACACCTAGAAG 58.548 43.478 0.00 0.00 0.00 2.85
802 803 4.080526 ACACCTCACAAAACACCTAGAAGT 60.081 41.667 0.00 0.00 0.00 3.01
803 804 4.273480 CACCTCACAAAACACCTAGAAGTG 59.727 45.833 0.00 0.00 43.65 3.16
810 811 1.898154 CACCTAGAAGTGTCCCGGG 59.102 63.158 16.85 16.85 32.89 5.73
811 812 0.613853 CACCTAGAAGTGTCCCGGGA 60.614 60.000 22.63 22.63 32.89 5.14
812 813 0.115745 ACCTAGAAGTGTCCCGGGAA 59.884 55.000 28.84 13.36 0.00 3.97
813 814 1.272807 CCTAGAAGTGTCCCGGGAAA 58.727 55.000 28.84 19.96 0.00 3.13
814 815 1.626825 CCTAGAAGTGTCCCGGGAAAA 59.373 52.381 28.84 14.78 0.00 2.29
815 816 2.039348 CCTAGAAGTGTCCCGGGAAAAA 59.961 50.000 28.84 11.73 0.00 1.94
836 837 6.811253 AAAAATACGGAATAGCTTCACACA 57.189 33.333 0.00 0.00 32.70 3.72
837 838 5.796350 AAATACGGAATAGCTTCACACAC 57.204 39.130 0.00 0.00 32.70 3.82
838 839 1.710013 ACGGAATAGCTTCACACACG 58.290 50.000 0.00 0.00 32.70 4.49
839 840 1.271379 ACGGAATAGCTTCACACACGA 59.729 47.619 0.00 0.00 32.70 4.35
840 841 2.094182 ACGGAATAGCTTCACACACGAT 60.094 45.455 0.00 0.00 32.70 3.73
841 842 2.282555 CGGAATAGCTTCACACACGATG 59.717 50.000 0.00 0.00 32.70 3.84
842 843 3.262420 GGAATAGCTTCACACACGATGT 58.738 45.455 0.00 0.00 44.81 3.06
843 844 3.684788 GGAATAGCTTCACACACGATGTT 59.315 43.478 0.00 0.00 40.64 2.71
844 845 4.154195 GGAATAGCTTCACACACGATGTTT 59.846 41.667 0.00 0.00 40.64 2.83
845 846 5.334879 GGAATAGCTTCACACACGATGTTTT 60.335 40.000 0.00 0.00 40.64 2.43
846 847 6.128391 GGAATAGCTTCACACACGATGTTTTA 60.128 38.462 0.00 0.00 40.64 1.52
847 848 6.985188 ATAGCTTCACACACGATGTTTTAT 57.015 33.333 0.00 0.00 40.64 1.40
848 849 5.034554 AGCTTCACACACGATGTTTTATG 57.965 39.130 0.00 0.00 40.64 1.90
849 850 4.083324 AGCTTCACACACGATGTTTTATGG 60.083 41.667 0.00 0.00 40.64 2.74
850 851 4.083537 GCTTCACACACGATGTTTTATGGA 60.084 41.667 0.00 0.00 40.64 3.41
851 852 5.391950 GCTTCACACACGATGTTTTATGGAT 60.392 40.000 0.00 0.00 40.64 3.41
852 853 5.544136 TCACACACGATGTTTTATGGATG 57.456 39.130 0.00 0.00 40.64 3.51
853 854 5.000591 TCACACACGATGTTTTATGGATGT 58.999 37.500 0.00 0.00 40.64 3.06
854 855 5.121611 TCACACACGATGTTTTATGGATGTC 59.878 40.000 0.00 0.00 40.64 3.06
855 856 5.000591 ACACACGATGTTTTATGGATGTCA 58.999 37.500 0.00 0.00 38.98 3.58
856 857 5.106712 ACACACGATGTTTTATGGATGTCAC 60.107 40.000 0.00 0.00 38.98 3.67
857 858 4.092821 ACACGATGTTTTATGGATGTCACG 59.907 41.667 0.00 0.00 0.00 4.35
858 859 4.328712 CACGATGTTTTATGGATGTCACGA 59.671 41.667 0.00 0.00 0.00 4.35
859 860 5.006649 CACGATGTTTTATGGATGTCACGAT 59.993 40.000 0.00 0.00 0.00 3.73
860 861 5.006649 ACGATGTTTTATGGATGTCACGATG 59.993 40.000 0.00 0.00 0.00 3.84
861 862 5.234116 CGATGTTTTATGGATGTCACGATGA 59.766 40.000 0.00 0.00 0.00 2.92
872 873 3.066369 GTCACGATGACGATGCTAAGA 57.934 47.619 0.00 0.00 37.67 2.10
873 874 3.633235 GTCACGATGACGATGCTAAGAT 58.367 45.455 0.00 0.00 37.67 2.40
874 875 3.666334 GTCACGATGACGATGCTAAGATC 59.334 47.826 0.00 0.00 37.67 2.75
875 876 3.565902 TCACGATGACGATGCTAAGATCT 59.434 43.478 0.00 0.00 42.66 2.75
876 877 3.911365 CACGATGACGATGCTAAGATCTC 59.089 47.826 0.00 0.00 42.66 2.75
877 878 3.565902 ACGATGACGATGCTAAGATCTCA 59.434 43.478 0.00 0.00 42.66 3.27
878 879 3.911365 CGATGACGATGCTAAGATCTCAC 59.089 47.826 0.00 0.00 42.66 3.51
879 880 3.340337 TGACGATGCTAAGATCTCACG 57.660 47.619 0.00 0.17 0.00 4.35
880 881 2.683362 TGACGATGCTAAGATCTCACGT 59.317 45.455 0.00 3.31 35.53 4.49
881 882 3.128764 TGACGATGCTAAGATCTCACGTT 59.871 43.478 0.00 0.00 33.10 3.99
882 883 3.696898 ACGATGCTAAGATCTCACGTTC 58.303 45.455 0.00 0.00 0.00 3.95
883 884 3.046390 CGATGCTAAGATCTCACGTTCC 58.954 50.000 0.00 0.00 0.00 3.62
884 885 3.243234 CGATGCTAAGATCTCACGTTCCT 60.243 47.826 0.00 0.00 0.00 3.36
885 886 4.688021 GATGCTAAGATCTCACGTTCCTT 58.312 43.478 0.00 0.00 0.00 3.36
886 887 5.505819 CGATGCTAAGATCTCACGTTCCTTA 60.506 44.000 0.00 0.00 0.00 2.69
887 888 5.854010 TGCTAAGATCTCACGTTCCTTAT 57.146 39.130 0.00 0.00 0.00 1.73
888 889 6.222038 TGCTAAGATCTCACGTTCCTTATT 57.778 37.500 0.00 0.00 0.00 1.40
889 890 6.640518 TGCTAAGATCTCACGTTCCTTATTT 58.359 36.000 0.00 0.00 0.00 1.40
890 891 7.778083 TGCTAAGATCTCACGTTCCTTATTTA 58.222 34.615 0.00 0.00 0.00 1.40
891 892 8.421784 TGCTAAGATCTCACGTTCCTTATTTAT 58.578 33.333 0.00 0.00 0.00 1.40
892 893 9.262358 GCTAAGATCTCACGTTCCTTATTTATT 57.738 33.333 0.00 0.00 0.00 1.40
912 913 9.862149 ATTTATTAAGGGATTTCATCTAACGGT 57.138 29.630 0.00 0.00 0.00 4.83
913 914 8.671384 TTATTAAGGGATTTCATCTAACGGTG 57.329 34.615 0.00 0.00 0.00 4.94
914 915 4.837093 AAGGGATTTCATCTAACGGTGA 57.163 40.909 0.00 0.00 0.00 4.02
915 916 5.373812 AAGGGATTTCATCTAACGGTGAT 57.626 39.130 0.00 0.00 0.00 3.06
916 917 5.373812 AGGGATTTCATCTAACGGTGATT 57.626 39.130 0.00 0.00 0.00 2.57
917 918 6.494666 AGGGATTTCATCTAACGGTGATTA 57.505 37.500 0.00 0.00 0.00 1.75
918 919 6.525629 AGGGATTTCATCTAACGGTGATTAG 58.474 40.000 0.00 0.00 34.06 1.73
919 920 5.179555 GGGATTTCATCTAACGGTGATTAGC 59.820 44.000 0.00 0.00 32.99 3.09
920 921 5.992217 GGATTTCATCTAACGGTGATTAGCT 59.008 40.000 0.00 0.00 32.99 3.32
921 922 6.146347 GGATTTCATCTAACGGTGATTAGCTC 59.854 42.308 0.00 0.00 32.99 4.09
922 923 4.585955 TCATCTAACGGTGATTAGCTCC 57.414 45.455 0.00 0.00 32.99 4.70
923 924 4.215908 TCATCTAACGGTGATTAGCTCCT 58.784 43.478 0.00 0.00 32.99 3.69
924 925 4.038042 TCATCTAACGGTGATTAGCTCCTG 59.962 45.833 0.00 0.00 32.99 3.86
925 926 3.362706 TCTAACGGTGATTAGCTCCTGT 58.637 45.455 0.00 0.00 32.99 4.00
926 927 2.674796 AACGGTGATTAGCTCCTGTC 57.325 50.000 0.00 0.00 0.00 3.51
927 928 0.456221 ACGGTGATTAGCTCCTGTCG 59.544 55.000 0.00 0.00 0.00 4.35
928 929 0.456221 CGGTGATTAGCTCCTGTCGT 59.544 55.000 0.00 0.00 0.00 4.34
929 930 1.799181 CGGTGATTAGCTCCTGTCGTG 60.799 57.143 0.00 0.00 0.00 4.35
930 931 1.281899 GTGATTAGCTCCTGTCGTGC 58.718 55.000 0.00 0.00 0.00 5.34
931 932 0.894835 TGATTAGCTCCTGTCGTGCA 59.105 50.000 0.00 0.00 33.25 4.57
932 933 1.281899 GATTAGCTCCTGTCGTGCAC 58.718 55.000 6.82 6.82 33.25 4.57
933 934 0.458543 ATTAGCTCCTGTCGTGCACG 60.459 55.000 32.76 32.76 41.45 5.34
934 935 3.626680 TAGCTCCTGTCGTGCACGC 62.627 63.158 33.63 26.73 39.60 5.34
936 937 2.433145 CTCCTGTCGTGCACGCAT 60.433 61.111 33.63 0.00 39.60 4.73
937 938 2.029288 CTCCTGTCGTGCACGCATT 61.029 57.895 33.63 0.00 39.60 3.56
938 939 1.959899 CTCCTGTCGTGCACGCATTC 61.960 60.000 33.63 21.77 39.60 2.67
939 940 2.094539 CTGTCGTGCACGCATTCG 59.905 61.111 33.63 17.91 39.60 3.34
940 941 3.964729 CTGTCGTGCACGCATTCGC 62.965 63.158 33.63 17.88 39.84 4.70
941 942 4.794241 GTCGTGCACGCATTCGCC 62.794 66.667 33.63 11.14 39.84 5.54
943 944 4.799473 CGTGCACGCATTCGCCTG 62.799 66.667 28.16 0.00 39.84 4.85
946 947 4.183686 GCACGCATTCGCCTGCAT 62.184 61.111 9.26 0.00 45.92 3.96
947 948 2.822758 GCACGCATTCGCCTGCATA 61.823 57.895 9.26 0.00 45.92 3.14
948 949 1.277739 CACGCATTCGCCTGCATAG 59.722 57.895 9.26 0.00 42.40 2.23
949 950 2.250485 CGCATTCGCCTGCATAGC 59.750 61.111 9.26 0.00 42.40 2.97
950 951 2.536673 CGCATTCGCCTGCATAGCA 61.537 57.895 9.30 0.00 42.40 3.49
951 952 1.009222 GCATTCGCCTGCATAGCAC 60.009 57.895 9.30 0.00 41.87 4.40
952 953 1.442526 GCATTCGCCTGCATAGCACT 61.443 55.000 9.30 0.00 41.87 4.40
953 954 0.306840 CATTCGCCTGCATAGCACTG 59.693 55.000 9.30 0.27 33.79 3.66
954 955 1.442526 ATTCGCCTGCATAGCACTGC 61.443 55.000 9.30 3.74 42.62 4.40
955 956 2.513204 CGCCTGCATAGCACTGCT 60.513 61.111 8.95 8.95 42.75 4.24
956 957 2.532256 CGCCTGCATAGCACTGCTC 61.532 63.158 6.86 0.00 42.75 4.26
989 990 3.447229 AGACCAACCAACAAAGTCCAAAG 59.553 43.478 0.00 0.00 0.00 2.77
1003 1004 2.485814 GTCCAAAGGAGTCATTGCACTC 59.514 50.000 0.00 7.37 41.99 3.51
1076 1079 1.214062 GAGTGAGTGCAGGAGACGG 59.786 63.158 0.00 0.00 0.00 4.79
1521 5922 1.998315 CTTCTTCGTGCTGTCCATCAG 59.002 52.381 0.00 0.00 46.12 2.90
1547 5948 3.073274 AGAAGCACAAAGGATGGTACC 57.927 47.619 4.43 4.43 0.00 3.34
1565 5981 3.739613 ATTTCCGGGCCAGGGACC 61.740 66.667 22.79 0.00 40.76 4.46
1711 6151 1.507140 TCATAAATCCGGCCCTCACT 58.493 50.000 0.00 0.00 0.00 3.41
1753 6196 0.508641 CGAAGCTATTGCGCGCTTAT 59.491 50.000 33.29 25.57 45.70 1.73
1956 6477 2.084681 GCTCATGTTGCTGTTGCGC 61.085 57.895 0.00 0.00 43.34 6.09
1978 6499 2.170187 GCTATCTAGGCATGGATCCCTG 59.830 54.545 9.90 11.30 32.65 4.45
1986 6507 0.034059 CATGGATCCCTGCGTCTACC 59.966 60.000 9.90 0.00 0.00 3.18
2111 6632 3.717294 TGCGGGAAGAAGAGGGGC 61.717 66.667 0.00 0.00 0.00 5.80
2467 7023 2.038975 TTCTCCCTGGGCTACGCT 59.961 61.111 8.22 0.00 0.00 5.07
2747 7318 4.507756 CGCCTGATTATCTCGTTGATTGAA 59.492 41.667 0.00 0.00 36.65 2.69
2748 7319 5.006649 CGCCTGATTATCTCGTTGATTGAAA 59.993 40.000 0.00 0.00 36.65 2.69
2750 7321 7.420800 GCCTGATTATCTCGTTGATTGAAATT 58.579 34.615 0.00 0.00 36.65 1.82
2797 7370 2.363788 GTGCTCACGTTCACCTGATA 57.636 50.000 0.00 0.00 0.00 2.15
2798 7371 2.893637 GTGCTCACGTTCACCTGATAT 58.106 47.619 0.00 0.00 0.00 1.63
2859 7432 1.136984 CCGACTACCTCGACTGCAC 59.863 63.158 0.00 0.00 46.14 4.57
2904 7477 3.426568 GCCGGCACAAGAGAGCAC 61.427 66.667 24.80 0.00 32.55 4.40
2908 7481 2.320587 GGCACAAGAGAGCACGTGG 61.321 63.158 18.88 0.44 32.55 4.94
2985 8416 4.935205 CGGTGGATGAACTCAACTGAATAA 59.065 41.667 0.00 0.00 36.39 1.40
3045 8495 7.599630 TCAGTACAAAGTTTCACTACGTTTT 57.400 32.000 0.00 0.00 0.00 2.43
3046 8496 8.031848 TCAGTACAAAGTTTCACTACGTTTTT 57.968 30.769 0.00 0.00 0.00 1.94
3140 9166 2.223845 TGTTGATTGATGCACACAGACG 59.776 45.455 0.00 0.00 0.00 4.18
3143 9169 2.993220 TGATTGATGCACACAGACGTAC 59.007 45.455 0.00 0.00 0.00 3.67
3159 9185 5.798934 CAGACGTACTAGTTTATTGCGAAGT 59.201 40.000 0.00 0.00 0.00 3.01
3195 9221 2.299867 ACCGATGCAAAAGATTTGCCTT 59.700 40.909 21.21 11.36 44.32 4.35
3196 9222 3.509575 ACCGATGCAAAAGATTTGCCTTA 59.490 39.130 21.21 6.99 44.32 2.69
3202 9228 7.010738 CGATGCAAAAGATTTGCCTTATCAATT 59.989 33.333 21.21 0.30 44.32 2.32
3203 9229 9.316730 GATGCAAAAGATTTGCCTTATCAATTA 57.683 29.630 21.21 3.25 44.32 1.40
3204 9230 8.477984 TGCAAAAGATTTGCCTTATCAATTAC 57.522 30.769 21.21 0.00 44.32 1.89
3205 9231 8.313292 TGCAAAAGATTTGCCTTATCAATTACT 58.687 29.630 21.21 0.00 44.32 2.24
3206 9232 8.811378 GCAAAAGATTTGCCTTATCAATTACTC 58.189 33.333 15.12 0.00 39.38 2.59
3207 9233 9.305925 CAAAAGATTTGCCTTATCAATTACTCC 57.694 33.333 0.00 0.00 0.00 3.85
3208 9234 7.588497 AAGATTTGCCTTATCAATTACTCCC 57.412 36.000 0.00 0.00 0.00 4.30
3209 9235 6.915786 AGATTTGCCTTATCAATTACTCCCT 58.084 36.000 0.00 0.00 0.00 4.20
3210 9236 7.001073 AGATTTGCCTTATCAATTACTCCCTC 58.999 38.462 0.00 0.00 0.00 4.30
3211 9237 4.706842 TGCCTTATCAATTACTCCCTCC 57.293 45.455 0.00 0.00 0.00 4.30
3212 9238 3.071023 TGCCTTATCAATTACTCCCTCCG 59.929 47.826 0.00 0.00 0.00 4.63
3213 9239 3.071167 GCCTTATCAATTACTCCCTCCGT 59.929 47.826 0.00 0.00 0.00 4.69
3214 9240 4.799917 GCCTTATCAATTACTCCCTCCGTC 60.800 50.000 0.00 0.00 0.00 4.79
3215 9241 4.262506 CCTTATCAATTACTCCCTCCGTCC 60.263 50.000 0.00 0.00 0.00 4.79
3216 9242 1.492764 TCAATTACTCCCTCCGTCCC 58.507 55.000 0.00 0.00 0.00 4.46
3217 9243 1.200519 CAATTACTCCCTCCGTCCCA 58.799 55.000 0.00 0.00 0.00 4.37
3218 9244 1.768870 CAATTACTCCCTCCGTCCCAT 59.231 52.381 0.00 0.00 0.00 4.00
3219 9245 2.969950 CAATTACTCCCTCCGTCCCATA 59.030 50.000 0.00 0.00 0.00 2.74
3220 9246 2.852714 TTACTCCCTCCGTCCCATAA 57.147 50.000 0.00 0.00 0.00 1.90
3221 9247 3.339713 TTACTCCCTCCGTCCCATAAT 57.660 47.619 0.00 0.00 0.00 1.28
3222 9248 1.424638 ACTCCCTCCGTCCCATAATG 58.575 55.000 0.00 0.00 0.00 1.90
3223 9249 1.344087 ACTCCCTCCGTCCCATAATGT 60.344 52.381 0.00 0.00 0.00 2.71
3224 9250 2.090943 ACTCCCTCCGTCCCATAATGTA 60.091 50.000 0.00 0.00 0.00 2.29
3225 9251 2.969950 CTCCCTCCGTCCCATAATGTAA 59.030 50.000 0.00 0.00 0.00 2.41
3226 9252 2.969950 TCCCTCCGTCCCATAATGTAAG 59.030 50.000 0.00 0.00 0.00 2.34
3227 9253 2.969950 CCCTCCGTCCCATAATGTAAGA 59.030 50.000 0.00 0.00 0.00 2.10
3228 9254 3.244112 CCCTCCGTCCCATAATGTAAGAC 60.244 52.174 0.00 0.00 0.00 3.01
3230 9256 3.025978 TCCGTCCCATAATGTAAGACGT 58.974 45.455 9.63 0.00 46.62 4.34
3231 9257 3.448301 TCCGTCCCATAATGTAAGACGTT 59.552 43.478 9.63 0.00 46.62 3.99
3232 9258 4.081531 TCCGTCCCATAATGTAAGACGTTT 60.082 41.667 9.63 0.00 46.62 3.60
3233 9259 4.632688 CCGTCCCATAATGTAAGACGTTTT 59.367 41.667 9.63 0.00 46.62 2.43
3234 9260 5.122711 CCGTCCCATAATGTAAGACGTTTTT 59.877 40.000 9.63 0.00 46.62 1.94
3249 9275 2.589494 TTTTTGGCACTGCACCAGT 58.411 47.368 2.82 0.00 46.51 4.00
3278 9304 5.789710 AAACGTCTTACATTATGGAACGG 57.210 39.130 6.60 0.00 0.00 4.44
3279 9305 4.724074 ACGTCTTACATTATGGAACGGA 57.276 40.909 6.60 0.00 0.00 4.69
3280 9306 4.679662 ACGTCTTACATTATGGAACGGAG 58.320 43.478 6.60 0.00 0.00 4.63
3281 9307 4.049186 CGTCTTACATTATGGAACGGAGG 58.951 47.826 0.00 0.00 0.00 4.30
3282 9308 4.377897 GTCTTACATTATGGAACGGAGGG 58.622 47.826 0.00 0.00 0.00 4.30
3283 9309 4.100498 GTCTTACATTATGGAACGGAGGGA 59.900 45.833 0.00 0.00 0.00 4.20
3284 9310 4.344102 TCTTACATTATGGAACGGAGGGAG 59.656 45.833 0.00 0.00 0.00 4.30
3285 9311 2.478292 ACATTATGGAACGGAGGGAGT 58.522 47.619 0.00 0.00 0.00 3.85
3295 9321 4.202233 GGAACGGAGGGAGTAAATAAGAGG 60.202 50.000 0.00 0.00 0.00 3.69
3413 10136 0.973632 ATAGGTTGACCTCGTGCACA 59.026 50.000 18.64 3.15 44.77 4.57
3502 10234 9.946165 CATATTTCCTCCGTTTTTATTTACTCC 57.054 33.333 0.00 0.00 0.00 3.85
3503 10235 6.484818 TTTCCTCCGTTTTTATTTACTCCG 57.515 37.500 0.00 0.00 0.00 4.63
3511 10245 8.767085 TCCGTTTTTATTTACTCCGCATATTAG 58.233 33.333 0.00 0.00 0.00 1.73
3691 10444 5.856126 CTTTGACCAAAGCTAATACGTGA 57.144 39.130 9.25 0.00 40.94 4.35
3932 10886 5.758296 CCTCGCTGTAATTCTATTTAAGGCA 59.242 40.000 0.00 0.00 0.00 4.75
4085 11039 1.048601 TTCAAAGGGACGAGTCAGCT 58.951 50.000 5.55 0.00 0.00 4.24
4143 11097 9.912634 CACAAGATAACATTCCACTTGTTTATT 57.087 29.630 0.00 0.00 45.37 1.40
4164 11118 5.354842 TTCGAGAGGACTACACTCAGATA 57.645 43.478 0.00 0.00 37.43 1.98
4284 11241 6.314400 GTGTTTCGGCTTACAGGAATAACATA 59.686 38.462 0.00 0.00 0.00 2.29
4285 11242 6.537301 TGTTTCGGCTTACAGGAATAACATAG 59.463 38.462 0.00 0.00 0.00 2.23
4286 11243 5.209818 TCGGCTTACAGGAATAACATAGG 57.790 43.478 0.00 0.00 0.00 2.57
4287 11244 4.039973 TCGGCTTACAGGAATAACATAGGG 59.960 45.833 0.00 0.00 0.00 3.53
4288 11245 4.039973 CGGCTTACAGGAATAACATAGGGA 59.960 45.833 0.00 0.00 0.00 4.20
4289 11246 5.280011 CGGCTTACAGGAATAACATAGGGAT 60.280 44.000 0.00 0.00 0.00 3.85
4335 11517 0.322546 CGCCTTGCCCCTAAGAAAGT 60.323 55.000 0.00 0.00 0.00 2.66
4378 11560 2.941064 AGCATCAACATTCATCTGTCGG 59.059 45.455 0.00 0.00 0.00 4.79
4395 11577 5.354234 TCTGTCGGCCTTCAAAGATAAAATC 59.646 40.000 0.00 0.00 0.00 2.17
4412 11594 9.606631 AGATAAAATCACATCTGGTAAACTCTC 57.393 33.333 0.00 0.00 30.30 3.20
4419 11601 6.375736 TCACATCTGGTAAACTCTCTAGACTG 59.624 42.308 0.00 0.00 0.00 3.51
4425 11607 3.759815 AAACTCTCTAGACTGGGCCTA 57.240 47.619 4.53 0.00 0.00 3.93
4503 11685 3.264845 AGGTGGACCGGCCCATTT 61.265 61.111 14.50 0.70 42.08 2.32
4506 11688 2.046285 GTGGACCGGCCCATTTCTG 61.046 63.158 14.50 0.00 38.66 3.02
4520 11702 5.248870 CCATTTCTGGGTATTTTTCTCCG 57.751 43.478 0.00 0.00 39.04 4.63
4521 11703 4.440112 CCATTTCTGGGTATTTTTCTCCGC 60.440 45.833 0.00 0.00 39.04 5.54
4526 11708 0.107557 GGTATTTTTCTCCGCGGGGA 60.108 55.000 27.50 27.50 41.08 4.81
4539 11721 2.283894 GGGGAGGGGGTGCTTTTG 60.284 66.667 0.00 0.00 0.00 2.44
4541 11723 1.771646 GGGAGGGGGTGCTTTTGTA 59.228 57.895 0.00 0.00 0.00 2.41
4542 11724 0.611062 GGGAGGGGGTGCTTTTGTAC 60.611 60.000 0.00 0.00 0.00 2.90
4543 11725 0.958876 GGAGGGGGTGCTTTTGTACG 60.959 60.000 0.00 0.00 35.82 3.67
4544 11726 0.958876 GAGGGGGTGCTTTTGTACGG 60.959 60.000 0.00 0.00 35.82 4.02
4546 11728 1.602605 GGGGTGCTTTTGTACGGCT 60.603 57.895 0.00 0.00 35.82 5.52
4549 11731 1.165270 GGTGCTTTTGTACGGCTCAT 58.835 50.000 0.00 0.00 35.82 2.90
4551 11733 2.030274 GGTGCTTTTGTACGGCTCATTT 60.030 45.455 0.00 0.00 35.82 2.32
4552 11734 3.552068 GGTGCTTTTGTACGGCTCATTTT 60.552 43.478 0.00 0.00 35.82 1.82
4553 11735 4.048504 GTGCTTTTGTACGGCTCATTTTT 58.951 39.130 0.00 0.00 0.00 1.94
4554 11736 4.148174 GTGCTTTTGTACGGCTCATTTTTC 59.852 41.667 0.00 0.00 0.00 2.29
4582 12117 8.665685 TCTTCTAGTTTTGTTTGTTCTTCACTC 58.334 33.333 0.00 0.00 0.00 3.51
4585 12120 6.249035 AGTTTTGTTTGTTCTTCACTCGAA 57.751 33.333 0.00 0.00 0.00 3.71
4586 12121 6.084277 AGTTTTGTTTGTTCTTCACTCGAAC 58.916 36.000 0.00 0.00 40.79 3.95
4594 12129 5.568482 TGTTCTTCACTCGAACATGTTTTG 58.432 37.500 13.36 8.89 44.03 2.44
4596 12131 5.155509 TCTTCACTCGAACATGTTTTGTG 57.844 39.130 22.36 22.36 38.99 3.33
4610 12145 8.687824 ACATGTTTTGTGTTCTTTTCTAAGTG 57.312 30.769 0.00 0.00 37.11 3.16
4611 12146 7.759433 ACATGTTTTGTGTTCTTTTCTAAGTGG 59.241 33.333 0.00 0.00 37.11 4.00
4683 12238 7.784633 TTTCCAAGAAAATGTTCATGTTTCC 57.215 32.000 0.00 0.00 36.09 3.13
4741 12305 9.698309 TTTGTTCAGACATTCAAAACTTTTACA 57.302 25.926 0.00 0.00 35.29 2.41
4972 12538 9.748708 CTAAAGAAATGTTGGAAAGATTGTTCA 57.251 29.630 0.00 0.00 39.06 3.18
5020 12586 8.397148 TGAACTCAAAATTGGCTGAAATTTTTC 58.603 29.630 12.34 9.60 43.74 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 7.287466 TGGATTCAAGGAAGAAGATGAACAAAA 59.713 33.333 0.00 0.00 34.88 2.44
3 4 6.777091 TGGATTCAAGGAAGAAGATGAACAAA 59.223 34.615 0.00 0.00 34.88 2.83
4 5 6.207417 GTGGATTCAAGGAAGAAGATGAACAA 59.793 38.462 0.00 0.00 34.88 2.83
5 6 5.707298 GTGGATTCAAGGAAGAAGATGAACA 59.293 40.000 0.00 0.00 34.88 3.18
7 8 5.256474 GGTGGATTCAAGGAAGAAGATGAA 58.744 41.667 0.00 0.00 36.35 2.57
8 9 4.324563 GGGTGGATTCAAGGAAGAAGATGA 60.325 45.833 0.00 0.00 0.00 2.92
9 10 3.950395 GGGTGGATTCAAGGAAGAAGATG 59.050 47.826 0.00 0.00 0.00 2.90
10 11 3.053320 GGGGTGGATTCAAGGAAGAAGAT 60.053 47.826 0.00 0.00 0.00 2.40
11 12 2.308866 GGGGTGGATTCAAGGAAGAAGA 59.691 50.000 0.00 0.00 0.00 2.87
12 13 2.041620 TGGGGTGGATTCAAGGAAGAAG 59.958 50.000 0.00 0.00 0.00 2.85
13 14 2.069775 TGGGGTGGATTCAAGGAAGAA 58.930 47.619 0.00 0.00 0.00 2.52
14 15 1.354368 GTGGGGTGGATTCAAGGAAGA 59.646 52.381 0.00 0.00 0.00 2.87
15 16 1.075374 TGTGGGGTGGATTCAAGGAAG 59.925 52.381 0.00 0.00 0.00 3.46
16 17 1.153539 TGTGGGGTGGATTCAAGGAA 58.846 50.000 0.00 0.00 0.00 3.36
17 18 1.381867 ATGTGGGGTGGATTCAAGGA 58.618 50.000 0.00 0.00 0.00 3.36
18 19 2.654863 GTATGTGGGGTGGATTCAAGG 58.345 52.381 0.00 0.00 0.00 3.61
19 20 2.025416 TGGTATGTGGGGTGGATTCAAG 60.025 50.000 0.00 0.00 0.00 3.02
20 21 1.996291 TGGTATGTGGGGTGGATTCAA 59.004 47.619 0.00 0.00 0.00 2.69
21 22 1.283613 GTGGTATGTGGGGTGGATTCA 59.716 52.381 0.00 0.00 0.00 2.57
22 23 1.409661 GGTGGTATGTGGGGTGGATTC 60.410 57.143 0.00 0.00 0.00 2.52
23 24 0.629058 GGTGGTATGTGGGGTGGATT 59.371 55.000 0.00 0.00 0.00 3.01
24 25 0.551377 TGGTGGTATGTGGGGTGGAT 60.551 55.000 0.00 0.00 0.00 3.41
25 26 1.151788 TGGTGGTATGTGGGGTGGA 60.152 57.895 0.00 0.00 0.00 4.02
26 27 1.302949 CTGGTGGTATGTGGGGTGG 59.697 63.158 0.00 0.00 0.00 4.61
27 28 1.378514 GCTGGTGGTATGTGGGGTG 60.379 63.158 0.00 0.00 0.00 4.61
28 29 2.612493 GGCTGGTGGTATGTGGGGT 61.612 63.158 0.00 0.00 0.00 4.95
29 30 2.275418 GGCTGGTGGTATGTGGGG 59.725 66.667 0.00 0.00 0.00 4.96
30 31 2.275418 GGGCTGGTGGTATGTGGG 59.725 66.667 0.00 0.00 0.00 4.61
31 32 2.275418 GGGGCTGGTGGTATGTGG 59.725 66.667 0.00 0.00 0.00 4.17
32 33 2.275418 GGGGGCTGGTGGTATGTG 59.725 66.667 0.00 0.00 0.00 3.21
33 34 3.407967 CGGGGGCTGGTGGTATGT 61.408 66.667 0.00 0.00 0.00 2.29
34 35 4.875713 GCGGGGGCTGGTGGTATG 62.876 72.222 0.00 0.00 0.00 2.39
54 55 3.787001 GACTGAGGGAAGGGCGGG 61.787 72.222 0.00 0.00 0.00 6.13
55 56 4.148825 CGACTGAGGGAAGGGCGG 62.149 72.222 0.00 0.00 0.00 6.13
56 57 4.821589 GCGACTGAGGGAAGGGCG 62.822 72.222 0.00 0.00 0.00 6.13
57 58 4.475135 GGCGACTGAGGGAAGGGC 62.475 72.222 0.00 0.00 0.00 5.19
58 59 4.148825 CGGCGACTGAGGGAAGGG 62.149 72.222 0.00 0.00 0.00 3.95
59 60 4.821589 GCGGCGACTGAGGGAAGG 62.822 72.222 12.98 0.00 0.00 3.46
60 61 3.708220 GAGCGGCGACTGAGGGAAG 62.708 68.421 12.98 0.00 0.00 3.46
61 62 3.760035 GAGCGGCGACTGAGGGAA 61.760 66.667 12.98 0.00 0.00 3.97
65 66 4.838486 GTCGGAGCGGCGACTGAG 62.838 72.222 12.98 3.84 32.94 3.35
66 67 3.963687 TAGTCGGAGCGGCGACTGA 62.964 63.158 12.98 11.65 44.03 3.41
67 68 3.456431 CTAGTCGGAGCGGCGACTG 62.456 68.421 12.98 9.17 44.03 3.51
68 69 3.203412 CTAGTCGGAGCGGCGACT 61.203 66.667 12.98 7.43 45.78 4.18
69 70 3.507009 ACTAGTCGGAGCGGCGAC 61.507 66.667 12.98 3.05 36.23 5.19
70 71 3.506096 CACTAGTCGGAGCGGCGA 61.506 66.667 12.98 0.00 36.23 5.54
71 72 4.554363 CCACTAGTCGGAGCGGCG 62.554 72.222 0.51 0.51 36.23 6.46
72 73 4.874977 GCCACTAGTCGGAGCGGC 62.875 72.222 13.57 9.24 0.00 6.53
73 74 4.554363 CGCCACTAGTCGGAGCGG 62.554 72.222 14.94 4.64 42.93 5.52
78 79 2.711922 AAGCTCCGCCACTAGTCGG 61.712 63.158 15.15 15.15 46.52 4.79
79 80 1.517257 CAAGCTCCGCCACTAGTCG 60.517 63.158 0.00 0.00 0.00 4.18
80 81 1.153549 CCAAGCTCCGCCACTAGTC 60.154 63.158 0.00 0.00 0.00 2.59
81 82 0.613853 TACCAAGCTCCGCCACTAGT 60.614 55.000 0.00 0.00 0.00 2.57
82 83 0.535335 TTACCAAGCTCCGCCACTAG 59.465 55.000 0.00 0.00 0.00 2.57
83 84 0.535335 CTTACCAAGCTCCGCCACTA 59.465 55.000 0.00 0.00 0.00 2.74
84 85 1.192146 TCTTACCAAGCTCCGCCACT 61.192 55.000 0.00 0.00 0.00 4.00
85 86 0.107654 ATCTTACCAAGCTCCGCCAC 60.108 55.000 0.00 0.00 0.00 5.01
86 87 0.178068 GATCTTACCAAGCTCCGCCA 59.822 55.000 0.00 0.00 0.00 5.69
87 88 0.533085 GGATCTTACCAAGCTCCGCC 60.533 60.000 0.00 0.00 34.45 6.13
88 89 0.466124 AGGATCTTACCAAGCTCCGC 59.534 55.000 3.78 0.00 46.05 5.54
89 90 2.939103 CAAAGGATCTTACCAAGCTCCG 59.061 50.000 3.78 0.00 46.05 4.63
90 91 3.282885 CCAAAGGATCTTACCAAGCTCC 58.717 50.000 1.38 1.38 42.73 4.70
91 92 3.282885 CCCAAAGGATCTTACCAAGCTC 58.717 50.000 0.00 0.00 33.47 4.09
92 93 2.024941 CCCCAAAGGATCTTACCAAGCT 60.025 50.000 0.00 0.00 38.24 3.74
93 94 2.379005 CCCCAAAGGATCTTACCAAGC 58.621 52.381 0.00 0.00 38.24 4.01
94 95 2.950418 GCCCCCAAAGGATCTTACCAAG 60.950 54.545 0.00 0.00 38.24 3.61
95 96 1.006639 GCCCCCAAAGGATCTTACCAA 59.993 52.381 0.00 0.00 38.24 3.67
96 97 0.629058 GCCCCCAAAGGATCTTACCA 59.371 55.000 0.00 0.00 38.24 3.25
97 98 0.465642 CGCCCCCAAAGGATCTTACC 60.466 60.000 0.00 0.00 38.24 2.85
98 99 0.465642 CCGCCCCCAAAGGATCTTAC 60.466 60.000 0.00 0.00 38.24 2.34
99 100 0.917333 ACCGCCCCCAAAGGATCTTA 60.917 55.000 0.00 0.00 38.24 2.10
100 101 2.238701 ACCGCCCCCAAAGGATCTT 61.239 57.895 0.00 0.00 38.24 2.40
101 102 2.614013 ACCGCCCCCAAAGGATCT 60.614 61.111 0.00 0.00 38.24 2.75
102 103 2.440247 CACCGCCCCCAAAGGATC 60.440 66.667 0.00 0.00 38.24 3.36
103 104 4.060667 CCACCGCCCCCAAAGGAT 62.061 66.667 0.00 0.00 38.24 3.24
106 107 4.278513 TCACCACCGCCCCCAAAG 62.279 66.667 0.00 0.00 0.00 2.77
107 108 4.278513 CTCACCACCGCCCCCAAA 62.279 66.667 0.00 0.00 0.00 3.28
670 671 2.202676 GTCGGCTCGCTGGAGAAG 60.203 66.667 0.00 0.00 43.27 2.85
671 672 4.116328 CGTCGGCTCGCTGGAGAA 62.116 66.667 0.00 0.00 43.27 2.87
685 686 4.516195 GAGGAAGGAGCGGCCGTC 62.516 72.222 28.70 21.54 43.54 4.79
700 701 3.365265 AAAAAGCAGCCGCCGGAG 61.365 61.111 7.68 0.00 39.83 4.63
716 717 6.263392 TGGGTTAGTCGATTTTTCACATGAAA 59.737 34.615 0.00 2.89 41.77 2.69
717 718 5.765677 TGGGTTAGTCGATTTTTCACATGAA 59.234 36.000 0.00 0.00 0.00 2.57
718 719 5.309638 TGGGTTAGTCGATTTTTCACATGA 58.690 37.500 0.00 0.00 0.00 3.07
719 720 5.621197 TGGGTTAGTCGATTTTTCACATG 57.379 39.130 0.00 0.00 0.00 3.21
720 721 6.642707 TTTGGGTTAGTCGATTTTTCACAT 57.357 33.333 0.00 0.00 0.00 3.21
721 722 6.642707 ATTTGGGTTAGTCGATTTTTCACA 57.357 33.333 0.00 0.00 0.00 3.58
728 729 9.635404 TGGAAATAATATTTGGGTTAGTCGATT 57.365 29.630 2.58 0.00 0.00 3.34
729 730 9.284968 CTGGAAATAATATTTGGGTTAGTCGAT 57.715 33.333 2.58 0.00 0.00 3.59
730 731 8.269317 ACTGGAAATAATATTTGGGTTAGTCGA 58.731 33.333 2.58 0.00 0.00 4.20
731 732 8.446599 ACTGGAAATAATATTTGGGTTAGTCG 57.553 34.615 2.58 0.00 0.00 4.18
732 733 9.403583 TGACTGGAAATAATATTTGGGTTAGTC 57.596 33.333 2.58 9.21 0.00 2.59
733 734 9.762381 TTGACTGGAAATAATATTTGGGTTAGT 57.238 29.630 2.58 0.99 0.00 2.24
735 736 9.762381 AGTTGACTGGAAATAATATTTGGGTTA 57.238 29.630 2.58 0.00 0.00 2.85
736 737 8.531146 CAGTTGACTGGAAATAATATTTGGGTT 58.469 33.333 2.58 0.00 40.20 4.11
737 738 8.066612 CAGTTGACTGGAAATAATATTTGGGT 57.933 34.615 2.58 0.00 40.20 4.51
753 754 7.026631 TCAATGTAAAACTTCCAGTTGACTG 57.973 36.000 4.15 4.15 38.66 3.51
754 755 7.639113 TTCAATGTAAAACTTCCAGTTGACT 57.361 32.000 0.00 0.00 38.66 3.41
755 756 7.757624 TGTTTCAATGTAAAACTTCCAGTTGAC 59.242 33.333 0.00 0.00 38.66 3.18
756 757 7.757624 GTGTTTCAATGTAAAACTTCCAGTTGA 59.242 33.333 0.00 0.00 38.66 3.18
757 758 7.010091 GGTGTTTCAATGTAAAACTTCCAGTTG 59.990 37.037 0.00 0.00 38.66 3.16
758 759 7.039270 GGTGTTTCAATGTAAAACTTCCAGTT 58.961 34.615 0.00 0.00 40.80 3.16
759 760 6.379988 AGGTGTTTCAATGTAAAACTTCCAGT 59.620 34.615 12.25 0.00 37.48 4.00
760 761 6.805713 AGGTGTTTCAATGTAAAACTTCCAG 58.194 36.000 12.25 0.00 37.48 3.86
761 762 6.378564 TGAGGTGTTTCAATGTAAAACTTCCA 59.621 34.615 3.37 0.00 37.48 3.53
762 763 6.695713 GTGAGGTGTTTCAATGTAAAACTTCC 59.304 38.462 3.37 4.41 37.48 3.46
763 764 7.254852 TGTGAGGTGTTTCAATGTAAAACTTC 58.745 34.615 0.00 0.00 37.48 3.01
764 765 7.164230 TGTGAGGTGTTTCAATGTAAAACTT 57.836 32.000 0.00 0.00 37.48 2.66
765 766 6.767524 TGTGAGGTGTTTCAATGTAAAACT 57.232 33.333 0.00 0.00 37.48 2.66
766 767 7.820044 TTTGTGAGGTGTTTCAATGTAAAAC 57.180 32.000 0.00 0.00 37.18 2.43
767 768 7.872993 TGTTTTGTGAGGTGTTTCAATGTAAAA 59.127 29.630 0.00 0.00 0.00 1.52
768 769 7.329717 GTGTTTTGTGAGGTGTTTCAATGTAAA 59.670 33.333 0.00 0.00 0.00 2.01
769 770 6.809196 GTGTTTTGTGAGGTGTTTCAATGTAA 59.191 34.615 0.00 0.00 0.00 2.41
770 771 6.326375 GTGTTTTGTGAGGTGTTTCAATGTA 58.674 36.000 0.00 0.00 0.00 2.29
771 772 5.167845 GTGTTTTGTGAGGTGTTTCAATGT 58.832 37.500 0.00 0.00 0.00 2.71
772 773 4.566360 GGTGTTTTGTGAGGTGTTTCAATG 59.434 41.667 0.00 0.00 0.00 2.82
773 774 4.466015 AGGTGTTTTGTGAGGTGTTTCAAT 59.534 37.500 0.00 0.00 0.00 2.57
774 775 3.829601 AGGTGTTTTGTGAGGTGTTTCAA 59.170 39.130 0.00 0.00 0.00 2.69
775 776 3.426615 AGGTGTTTTGTGAGGTGTTTCA 58.573 40.909 0.00 0.00 0.00 2.69
776 777 4.879545 TCTAGGTGTTTTGTGAGGTGTTTC 59.120 41.667 0.00 0.00 0.00 2.78
777 778 4.850680 TCTAGGTGTTTTGTGAGGTGTTT 58.149 39.130 0.00 0.00 0.00 2.83
778 779 4.497291 TCTAGGTGTTTTGTGAGGTGTT 57.503 40.909 0.00 0.00 0.00 3.32
779 780 4.080526 ACTTCTAGGTGTTTTGTGAGGTGT 60.081 41.667 0.00 0.00 0.00 4.16
780 781 4.273480 CACTTCTAGGTGTTTTGTGAGGTG 59.727 45.833 0.00 0.00 33.04 4.00
781 782 4.080526 ACACTTCTAGGTGTTTTGTGAGGT 60.081 41.667 0.00 0.00 46.71 3.85
782 783 4.451900 ACACTTCTAGGTGTTTTGTGAGG 58.548 43.478 0.00 0.00 46.71 3.86
792 793 0.613853 TCCCGGGACACTTCTAGGTG 60.614 60.000 22.63 0.00 42.34 4.00
793 794 0.115745 TTCCCGGGACACTTCTAGGT 59.884 55.000 26.87 0.00 0.00 3.08
794 795 1.272807 TTTCCCGGGACACTTCTAGG 58.727 55.000 26.87 0.00 0.00 3.02
795 796 3.412237 TTTTTCCCGGGACACTTCTAG 57.588 47.619 26.87 0.00 0.00 2.43
813 814 6.608610 GTGTGTGAAGCTATTCCGTATTTTT 58.391 36.000 0.00 0.00 34.28 1.94
814 815 5.163893 CGTGTGTGAAGCTATTCCGTATTTT 60.164 40.000 0.00 0.00 34.28 1.82
815 816 4.328983 CGTGTGTGAAGCTATTCCGTATTT 59.671 41.667 0.00 0.00 34.28 1.40
816 817 3.863424 CGTGTGTGAAGCTATTCCGTATT 59.137 43.478 0.00 0.00 34.28 1.89
817 818 3.129813 TCGTGTGTGAAGCTATTCCGTAT 59.870 43.478 0.00 0.00 34.28 3.06
818 819 2.488937 TCGTGTGTGAAGCTATTCCGTA 59.511 45.455 0.00 0.00 34.28 4.02
819 820 1.271379 TCGTGTGTGAAGCTATTCCGT 59.729 47.619 0.00 0.00 34.28 4.69
820 821 1.990799 TCGTGTGTGAAGCTATTCCG 58.009 50.000 0.00 0.00 34.28 4.30
821 822 3.262420 ACATCGTGTGTGAAGCTATTCC 58.738 45.455 0.00 0.00 40.28 3.01
822 823 4.928661 AACATCGTGTGTGAAGCTATTC 57.071 40.909 0.00 0.00 41.14 1.75
823 824 5.689383 AAAACATCGTGTGTGAAGCTATT 57.311 34.783 0.00 0.00 41.14 1.73
824 825 6.183360 CCATAAAACATCGTGTGTGAAGCTAT 60.183 38.462 0.00 0.00 41.14 2.97
825 826 5.121611 CCATAAAACATCGTGTGTGAAGCTA 59.878 40.000 0.00 0.00 41.14 3.32
826 827 4.083324 CCATAAAACATCGTGTGTGAAGCT 60.083 41.667 0.00 0.00 41.14 3.74
827 828 4.083537 TCCATAAAACATCGTGTGTGAAGC 60.084 41.667 0.00 0.00 41.14 3.86
828 829 5.605564 TCCATAAAACATCGTGTGTGAAG 57.394 39.130 0.00 0.00 41.14 3.02
829 830 5.471797 ACATCCATAAAACATCGTGTGTGAA 59.528 36.000 0.00 0.00 41.14 3.18
830 831 5.000591 ACATCCATAAAACATCGTGTGTGA 58.999 37.500 0.00 0.00 41.14 3.58
831 832 5.106752 TGACATCCATAAAACATCGTGTGTG 60.107 40.000 0.00 0.00 41.14 3.82
832 833 5.000591 TGACATCCATAAAACATCGTGTGT 58.999 37.500 0.00 0.00 44.84 3.72
833 834 5.323900 GTGACATCCATAAAACATCGTGTG 58.676 41.667 0.00 0.00 0.00 3.82
834 835 4.092821 CGTGACATCCATAAAACATCGTGT 59.907 41.667 0.00 0.00 0.00 4.49
835 836 4.328712 TCGTGACATCCATAAAACATCGTG 59.671 41.667 0.00 0.00 0.00 4.35
836 837 4.500127 TCGTGACATCCATAAAACATCGT 58.500 39.130 0.00 0.00 0.00 3.73
837 838 5.234116 TCATCGTGACATCCATAAAACATCG 59.766 40.000 0.00 0.00 0.00 3.84
838 839 6.422223 GTCATCGTGACATCCATAAAACATC 58.578 40.000 11.62 0.00 46.22 3.06
839 840 6.363577 GTCATCGTGACATCCATAAAACAT 57.636 37.500 11.62 0.00 46.22 2.71
840 841 5.794687 GTCATCGTGACATCCATAAAACA 57.205 39.130 11.62 0.00 46.22 2.83
852 853 3.066369 TCTTAGCATCGTCATCGTGAC 57.934 47.619 7.74 7.74 43.65 3.67
853 854 3.565902 AGATCTTAGCATCGTCATCGTGA 59.434 43.478 0.00 0.00 38.33 4.35
854 855 3.894920 AGATCTTAGCATCGTCATCGTG 58.105 45.455 0.00 0.00 38.33 4.35
855 856 3.565902 TGAGATCTTAGCATCGTCATCGT 59.434 43.478 0.00 0.00 38.33 3.73
856 857 3.911365 GTGAGATCTTAGCATCGTCATCG 59.089 47.826 0.00 0.00 38.55 3.84
857 858 3.911365 CGTGAGATCTTAGCATCGTCATC 59.089 47.826 0.00 0.00 0.00 2.92
858 859 3.316588 ACGTGAGATCTTAGCATCGTCAT 59.683 43.478 0.00 0.00 0.00 3.06
859 860 2.683362 ACGTGAGATCTTAGCATCGTCA 59.317 45.455 0.00 0.00 0.00 4.35
860 861 3.341857 ACGTGAGATCTTAGCATCGTC 57.658 47.619 0.00 0.00 0.00 4.20
861 862 3.489398 GGAACGTGAGATCTTAGCATCGT 60.489 47.826 0.00 0.00 32.90 3.73
862 863 3.046390 GGAACGTGAGATCTTAGCATCG 58.954 50.000 0.00 0.00 32.90 3.84
863 864 4.314740 AGGAACGTGAGATCTTAGCATC 57.685 45.455 0.00 0.00 32.90 3.91
864 865 4.744795 AAGGAACGTGAGATCTTAGCAT 57.255 40.909 0.00 0.00 32.90 3.79
865 866 5.854010 ATAAGGAACGTGAGATCTTAGCA 57.146 39.130 0.00 0.00 32.90 3.49
866 867 8.819643 ATAAATAAGGAACGTGAGATCTTAGC 57.180 34.615 0.00 0.00 32.90 3.09
897 898 6.146347 GGAGCTAATCACCGTTAGATGAAATC 59.854 42.308 0.00 0.00 46.04 2.17
898 899 5.992217 GGAGCTAATCACCGTTAGATGAAAT 59.008 40.000 0.00 0.00 34.34 2.17
899 900 5.128827 AGGAGCTAATCACCGTTAGATGAAA 59.871 40.000 0.00 0.00 34.34 2.69
900 901 4.649674 AGGAGCTAATCACCGTTAGATGAA 59.350 41.667 0.00 0.00 34.34 2.57
901 902 4.038042 CAGGAGCTAATCACCGTTAGATGA 59.962 45.833 0.00 0.00 34.34 2.92
902 903 4.202161 ACAGGAGCTAATCACCGTTAGATG 60.202 45.833 0.00 0.00 34.34 2.90
903 904 3.961408 ACAGGAGCTAATCACCGTTAGAT 59.039 43.478 0.00 0.00 34.34 1.98
904 905 3.362706 ACAGGAGCTAATCACCGTTAGA 58.637 45.455 0.00 0.00 34.34 2.10
905 906 3.707793 GACAGGAGCTAATCACCGTTAG 58.292 50.000 0.00 0.00 35.31 2.34
906 907 2.098607 CGACAGGAGCTAATCACCGTTA 59.901 50.000 0.00 0.00 0.00 3.18
907 908 1.135083 CGACAGGAGCTAATCACCGTT 60.135 52.381 0.00 0.00 0.00 4.44
908 909 0.456221 CGACAGGAGCTAATCACCGT 59.544 55.000 0.00 0.00 0.00 4.83
909 910 0.456221 ACGACAGGAGCTAATCACCG 59.544 55.000 0.00 0.00 0.00 4.94
910 911 1.927895 CACGACAGGAGCTAATCACC 58.072 55.000 0.00 0.00 0.00 4.02
911 912 1.281899 GCACGACAGGAGCTAATCAC 58.718 55.000 0.00 0.00 0.00 3.06
912 913 0.894835 TGCACGACAGGAGCTAATCA 59.105 50.000 0.00 0.00 0.00 2.57
913 914 1.281899 GTGCACGACAGGAGCTAATC 58.718 55.000 0.00 0.00 0.00 1.75
914 915 0.458543 CGTGCACGACAGGAGCTAAT 60.459 55.000 34.93 0.00 43.02 1.73
915 916 1.080772 CGTGCACGACAGGAGCTAA 60.081 57.895 34.93 0.00 43.02 3.09
916 917 2.566529 CGTGCACGACAGGAGCTA 59.433 61.111 34.93 0.00 43.02 3.32
919 920 1.959899 GAATGCGTGCACGACAGGAG 61.960 60.000 41.19 12.45 43.02 3.69
920 921 2.027073 GAATGCGTGCACGACAGGA 61.027 57.895 41.19 19.01 43.02 3.86
921 922 2.476051 GAATGCGTGCACGACAGG 59.524 61.111 41.19 14.03 43.02 4.00
922 923 2.094539 CGAATGCGTGCACGACAG 59.905 61.111 41.19 22.08 43.02 3.51
923 924 4.070818 GCGAATGCGTGCACGACA 62.071 61.111 41.19 34.19 43.02 4.35
924 925 4.794241 GGCGAATGCGTGCACGAC 62.794 66.667 41.19 30.17 44.10 4.34
933 934 1.009222 GTGCTATGCAGGCGAATGC 60.009 57.895 9.38 5.42 46.68 3.56
934 935 0.306840 CAGTGCTATGCAGGCGAATG 59.693 55.000 9.38 5.00 40.08 2.67
935 936 1.442526 GCAGTGCTATGCAGGCGAAT 61.443 55.000 8.18 0.00 45.77 3.34
936 937 2.108514 GCAGTGCTATGCAGGCGAA 61.109 57.895 8.18 0.00 45.77 4.70
937 938 2.512286 GCAGTGCTATGCAGGCGA 60.512 61.111 8.18 0.00 45.77 5.54
943 944 1.086696 TTTTCCGAGCAGTGCTATGC 58.913 50.000 19.77 4.76 46.88 3.14
944 945 5.484173 TTATTTTTCCGAGCAGTGCTATG 57.516 39.130 19.77 13.69 39.88 2.23
945 946 5.880332 TCTTTATTTTTCCGAGCAGTGCTAT 59.120 36.000 19.77 8.60 39.88 2.97
946 947 5.121768 GTCTTTATTTTTCCGAGCAGTGCTA 59.878 40.000 19.77 0.00 39.88 3.49
947 948 4.072131 TCTTTATTTTTCCGAGCAGTGCT 58.928 39.130 19.86 19.86 43.88 4.40
948 949 4.159120 GTCTTTATTTTTCCGAGCAGTGC 58.841 43.478 7.13 7.13 0.00 4.40
949 950 4.215399 TGGTCTTTATTTTTCCGAGCAGTG 59.785 41.667 0.00 0.00 0.00 3.66
950 951 4.394729 TGGTCTTTATTTTTCCGAGCAGT 58.605 39.130 0.00 0.00 0.00 4.40
951 952 5.154222 GTTGGTCTTTATTTTTCCGAGCAG 58.846 41.667 0.00 0.00 34.20 4.24
952 953 4.022676 GGTTGGTCTTTATTTTTCCGAGCA 60.023 41.667 0.00 0.00 32.34 4.26
953 954 4.022676 TGGTTGGTCTTTATTTTTCCGAGC 60.023 41.667 0.00 0.00 0.00 5.03
954 955 5.699097 TGGTTGGTCTTTATTTTTCCGAG 57.301 39.130 0.00 0.00 0.00 4.63
955 956 5.360144 TGTTGGTTGGTCTTTATTTTTCCGA 59.640 36.000 0.00 0.00 0.00 4.55
956 957 5.593010 TGTTGGTTGGTCTTTATTTTTCCG 58.407 37.500 0.00 0.00 0.00 4.30
989 990 2.263077 CGTACAGAGTGCAATGACTCC 58.737 52.381 0.00 0.00 43.04 3.85
1003 1004 4.437390 GGAAAGATGGAAATGTGCGTACAG 60.437 45.833 12.93 0.00 40.79 2.74
1056 1059 1.594310 GTCTCCTGCACTCACTCCC 59.406 63.158 0.00 0.00 0.00 4.30
1521 5922 0.670162 TCCTTTGTGCTTCTTGCTGC 59.330 50.000 0.00 0.00 43.37 5.25
1547 5948 2.440247 GTCCCTGGCCCGGAAATG 60.440 66.667 16.02 0.00 0.00 2.32
1711 6151 3.005472 CCGCGGATCTATTTTCCTCACTA 59.995 47.826 24.07 0.00 0.00 2.74
1725 6165 1.664965 AATAGCTTCGCCGCGGATC 60.665 57.895 33.48 11.71 34.40 3.36
1903 6405 2.172717 GGGGAATCAGAGGGATTTCGAA 59.827 50.000 0.00 0.00 46.17 3.71
1934 6439 0.039798 CAACAGCAACATGAGCGCTT 60.040 50.000 13.26 0.00 37.01 4.68
1956 6477 1.137872 GGGATCCATGCCTAGATAGCG 59.862 57.143 15.23 0.00 35.12 4.26
1978 6499 2.860735 GTCTTCATCATGTGGTAGACGC 59.139 50.000 9.14 0.00 33.46 5.19
1986 6507 3.183976 GCGAGCATAGTCTTCATCATGTG 59.816 47.826 0.00 0.00 0.00 3.21
2077 6598 4.643387 ACAAAGGAGGCGGCGCTT 62.643 61.111 32.30 26.34 0.00 4.68
2111 6632 2.045926 CCGTTGGCTTCCTCCAGG 60.046 66.667 0.00 0.00 37.44 4.45
2177 6713 2.203938 TTCCCAGAGAAGCCCGGT 60.204 61.111 0.00 0.00 0.00 5.28
2187 6723 1.708993 AAGTGCTGTGGCTTCCCAGA 61.709 55.000 0.00 0.00 43.18 3.86
2249 6785 4.112341 CCTTGCAGCAGCTTCCGC 62.112 66.667 1.76 0.00 42.74 5.54
2356 6892 2.045708 TCGCATTTGCCGGCAAGAT 61.046 52.632 37.88 29.36 37.24 2.40
2467 7023 0.901124 GCTTCTTCTCCAGCTCCAGA 59.099 55.000 0.00 0.00 32.87 3.86
2568 7124 4.704833 TTGCCTGAGCGTCTGCCC 62.705 66.667 0.00 0.00 44.31 5.36
2578 7134 1.746615 GAGCTCCGCATTTGCCTGA 60.747 57.895 0.87 0.00 37.91 3.86
2579 7135 2.796651 GAGCTCCGCATTTGCCTG 59.203 61.111 0.87 0.00 37.91 4.85
2606 7177 4.828296 GGGCCCCAGGACATGCTG 62.828 72.222 12.23 0.00 27.52 4.41
2669 7240 2.669808 CTACTACCTCGCCAGCGCTG 62.670 65.000 30.52 30.52 39.59 5.18
2750 7321 4.034163 TGCGTCGACAACATTACAGAAAAA 59.966 37.500 17.16 0.00 0.00 1.94
2757 7330 3.081445 CGAAATGCGTCGACAACATTAC 58.919 45.455 25.51 8.30 43.86 1.89
2797 7370 0.179100 CGACGAGTCATCTGGCCAAT 60.179 55.000 7.01 0.08 0.00 3.16
2798 7371 1.215382 CGACGAGTCATCTGGCCAA 59.785 57.895 7.01 0.00 0.00 4.52
2832 7405 2.202810 GGTAGTCGGAGCAGCTGC 60.203 66.667 31.53 31.53 42.49 5.25
2834 7407 2.115911 CGAGGTAGTCGGAGCAGCT 61.116 63.158 0.00 0.00 45.58 4.24
2859 7432 1.150081 GGATCATCTGCTGGGTGGG 59.850 63.158 0.00 0.00 0.00 4.61
2908 7481 4.333926 GCTTCTTGTCATACTTGGTGGATC 59.666 45.833 0.00 0.00 0.00 3.36
3004 8435 8.689251 TTGTACTGAAAATCGACAGAGATAAG 57.311 34.615 7.68 0.00 37.54 1.73
3045 8495 6.014070 TGTGGTAGGAGTAGTGATAAGCAAAA 60.014 38.462 0.00 0.00 0.00 2.44
3046 8496 5.482526 TGTGGTAGGAGTAGTGATAAGCAAA 59.517 40.000 0.00 0.00 0.00 3.68
3087 9021 9.231297 CTGGTGATTATCTTCCTTTTGTAAAGA 57.769 33.333 0.89 0.00 33.83 2.52
3165 9191 6.917217 ATCTTTTGCATCGGTTTTCAAAAA 57.083 29.167 0.00 0.00 37.77 1.94
3170 9196 4.377328 GGCAAATCTTTTGCATCGGTTTTC 60.377 41.667 22.22 2.82 46.58 2.29
3175 9201 2.660189 AGGCAAATCTTTTGCATCGG 57.340 45.000 22.22 0.00 46.58 4.18
3176 9202 5.342433 TGATAAGGCAAATCTTTTGCATCG 58.658 37.500 22.22 0.00 46.58 3.84
3179 9205 8.313292 AGTAATTGATAAGGCAAATCTTTTGCA 58.687 29.630 22.22 6.61 46.58 4.08
3195 9221 3.236896 GGGACGGAGGGAGTAATTGATA 58.763 50.000 0.00 0.00 0.00 2.15
3196 9222 2.047830 GGGACGGAGGGAGTAATTGAT 58.952 52.381 0.00 0.00 0.00 2.57
3202 9228 2.090943 ACATTATGGGACGGAGGGAGTA 60.091 50.000 0.00 0.00 0.00 2.59
3203 9229 1.344087 ACATTATGGGACGGAGGGAGT 60.344 52.381 0.00 0.00 0.00 3.85
3204 9230 1.424638 ACATTATGGGACGGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30
3205 9231 2.779429 TACATTATGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
3206 9232 2.969950 TCTTACATTATGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
3207 9233 3.552273 CGTCTTACATTATGGGACGGAGG 60.552 52.174 20.50 5.87 43.69 4.30
3208 9234 3.639538 CGTCTTACATTATGGGACGGAG 58.360 50.000 20.50 2.74 43.69 4.63
3209 9235 3.720949 CGTCTTACATTATGGGACGGA 57.279 47.619 20.50 2.30 43.69 4.69
3231 9257 2.589494 ACTGGTGCAGTGCCAAAAA 58.411 47.368 13.72 0.00 43.63 1.94
3232 9258 4.353325 ACTGGTGCAGTGCCAAAA 57.647 50.000 13.72 0.00 43.63 2.44
3254 9280 6.427547 TCCGTTCCATAATGTAAGACGTTTTT 59.572 34.615 0.00 0.00 0.00 1.94
3255 9281 5.933463 TCCGTTCCATAATGTAAGACGTTTT 59.067 36.000 0.00 0.00 0.00 2.43
3256 9282 5.481105 TCCGTTCCATAATGTAAGACGTTT 58.519 37.500 0.00 0.00 0.00 3.60
3257 9283 5.075858 TCCGTTCCATAATGTAAGACGTT 57.924 39.130 0.00 0.00 0.00 3.99
3258 9284 4.441079 CCTCCGTTCCATAATGTAAGACGT 60.441 45.833 0.00 0.00 0.00 4.34
3259 9285 4.049186 CCTCCGTTCCATAATGTAAGACG 58.951 47.826 0.00 0.00 0.00 4.18
3260 9286 4.100498 TCCCTCCGTTCCATAATGTAAGAC 59.900 45.833 0.00 0.00 0.00 3.01
3261 9287 4.291792 TCCCTCCGTTCCATAATGTAAGA 58.708 43.478 0.00 0.00 0.00 2.10
3262 9288 4.101119 ACTCCCTCCGTTCCATAATGTAAG 59.899 45.833 0.00 0.00 0.00 2.34
3263 9289 4.035112 ACTCCCTCCGTTCCATAATGTAA 58.965 43.478 0.00 0.00 0.00 2.41
3264 9290 3.649843 ACTCCCTCCGTTCCATAATGTA 58.350 45.455 0.00 0.00 0.00 2.29
3265 9291 2.478292 ACTCCCTCCGTTCCATAATGT 58.522 47.619 0.00 0.00 0.00 2.71
3266 9292 4.682778 TTACTCCCTCCGTTCCATAATG 57.317 45.455 0.00 0.00 0.00 1.90
3267 9293 5.906772 ATTTACTCCCTCCGTTCCATAAT 57.093 39.130 0.00 0.00 0.00 1.28
3268 9294 6.612456 TCTTATTTACTCCCTCCGTTCCATAA 59.388 38.462 0.00 0.00 0.00 1.90
3269 9295 6.138263 TCTTATTTACTCCCTCCGTTCCATA 58.862 40.000 0.00 0.00 0.00 2.74
3270 9296 4.966805 TCTTATTTACTCCCTCCGTTCCAT 59.033 41.667 0.00 0.00 0.00 3.41
3271 9297 4.355549 TCTTATTTACTCCCTCCGTTCCA 58.644 43.478 0.00 0.00 0.00 3.53
3272 9298 4.202233 CCTCTTATTTACTCCCTCCGTTCC 60.202 50.000 0.00 0.00 0.00 3.62
3273 9299 4.648307 TCCTCTTATTTACTCCCTCCGTTC 59.352 45.833 0.00 0.00 0.00 3.95
3274 9300 4.617593 TCCTCTTATTTACTCCCTCCGTT 58.382 43.478 0.00 0.00 0.00 4.44
3275 9301 4.079327 TCTCCTCTTATTTACTCCCTCCGT 60.079 45.833 0.00 0.00 0.00 4.69
3276 9302 4.471548 TCTCCTCTTATTTACTCCCTCCG 58.528 47.826 0.00 0.00 0.00 4.63
3277 9303 7.951245 TCTATTCTCCTCTTATTTACTCCCTCC 59.049 40.741 0.00 0.00 0.00 4.30
3278 9304 8.943594 TCTATTCTCCTCTTATTTACTCCCTC 57.056 38.462 0.00 0.00 0.00 4.30
3279 9305 8.516198 ACTCTATTCTCCTCTTATTTACTCCCT 58.484 37.037 0.00 0.00 0.00 4.20
3280 9306 8.715190 ACTCTATTCTCCTCTTATTTACTCCC 57.285 38.462 0.00 0.00 0.00 4.30
3413 10136 3.493350 CGCCTATTCTACTCCAGCATGTT 60.493 47.826 0.00 0.00 0.00 2.71
3502 10234 8.894409 TTGTTTTCAGTCAAATCTAATATGCG 57.106 30.769 0.00 0.00 0.00 4.73
3511 10245 8.609478 TTACGAAGTTTGTTTTCAGTCAAATC 57.391 30.769 0.00 0.00 37.78 2.17
3691 10444 8.716674 TGTACTCCCTCCGTCTTTATATAATT 57.283 34.615 0.00 0.00 0.00 1.40
3905 10858 7.817962 GCCTTAAATAGAATTACAGCGAGGATA 59.182 37.037 0.00 0.00 0.00 2.59
4143 11097 3.916359 ATCTGAGTGTAGTCCTCTCGA 57.084 47.619 0.00 0.00 0.00 4.04
4232 11187 9.280174 CAGTCAATAAAGTTTGGTTTACCTCTA 57.720 33.333 0.00 0.00 36.82 2.43
4233 11188 7.230712 CCAGTCAATAAAGTTTGGTTTACCTCT 59.769 37.037 0.00 0.00 36.82 3.69
4284 11241 2.945718 GGTGTACCCCATGATCCCT 58.054 57.895 0.00 0.00 0.00 4.20
4372 11554 5.123820 TGATTTTATCTTTGAAGGCCGACAG 59.876 40.000 0.00 0.00 0.00 3.51
4376 11558 5.309323 TGTGATTTTATCTTTGAAGGCCG 57.691 39.130 0.00 0.00 0.00 6.13
4378 11560 6.976925 CCAGATGTGATTTTATCTTTGAAGGC 59.023 38.462 0.00 0.00 31.53 4.35
4395 11577 6.405286 CCAGTCTAGAGAGTTTACCAGATGTG 60.405 46.154 0.00 0.00 0.00 3.21
4407 11589 2.494158 TCTAGGCCCAGTCTAGAGAGT 58.506 52.381 0.00 0.00 41.23 3.24
4412 11594 2.896685 CAAGGATCTAGGCCCAGTCTAG 59.103 54.545 0.00 0.00 39.01 2.43
4419 11601 4.421131 TCTATTCTCAAGGATCTAGGCCC 58.579 47.826 0.00 0.00 0.00 5.80
4425 11607 9.432982 AGTCAAATACTCTATTCTCAAGGATCT 57.567 33.333 0.00 0.00 30.33 2.75
4503 11685 1.406341 CCGCGGAGAAAAATACCCAGA 60.406 52.381 24.07 0.00 0.00 3.86
4506 11688 1.099295 CCCCGCGGAGAAAAATACCC 61.099 60.000 30.73 0.00 0.00 3.69
4521 11703 3.979497 AAAAGCACCCCCTCCCCG 61.979 66.667 0.00 0.00 0.00 5.73
4526 11708 1.074248 CCGTACAAAAGCACCCCCT 59.926 57.895 0.00 0.00 0.00 4.79
4528 11710 1.583495 GAGCCGTACAAAAGCACCCC 61.583 60.000 0.00 0.00 0.00 4.95
4529 11711 0.887387 TGAGCCGTACAAAAGCACCC 60.887 55.000 0.00 0.00 0.00 4.61
4531 11713 2.989422 AATGAGCCGTACAAAAGCAC 57.011 45.000 0.00 0.00 0.00 4.40
4534 11716 6.438763 AGAAGAAAAATGAGCCGTACAAAAG 58.561 36.000 0.00 0.00 0.00 2.27
4536 11718 6.262273 AGAAGAAGAAAAATGAGCCGTACAAA 59.738 34.615 0.00 0.00 0.00 2.83
4539 11721 5.864628 AGAAGAAGAAAAATGAGCCGTAC 57.135 39.130 0.00 0.00 0.00 3.67
4541 11723 5.552178 ACTAGAAGAAGAAAAATGAGCCGT 58.448 37.500 0.00 0.00 0.00 5.68
4542 11724 6.487689 AACTAGAAGAAGAAAAATGAGCCG 57.512 37.500 0.00 0.00 0.00 5.52
4543 11725 8.138074 ACAAAACTAGAAGAAGAAAAATGAGCC 58.862 33.333 0.00 0.00 0.00 4.70
4544 11726 9.521503 AACAAAACTAGAAGAAGAAAAATGAGC 57.478 29.630 0.00 0.00 0.00 4.26
4553 11735 9.226606 TGAAGAACAAACAAAACTAGAAGAAGA 57.773 29.630 0.00 0.00 0.00 2.87
4554 11736 9.278734 GTGAAGAACAAACAAAACTAGAAGAAG 57.721 33.333 0.00 0.00 0.00 2.85
4585 12120 7.759433 CCACTTAGAAAAGAACACAAAACATGT 59.241 33.333 0.00 0.00 38.45 3.21
4586 12121 7.759433 ACCACTTAGAAAAGAACACAAAACATG 59.241 33.333 0.00 0.00 36.50 3.21
4801 12367 8.422973 TGAAATTCCAGACAATTTTGAACAAG 57.577 30.769 0.00 0.00 36.33 3.16
4994 12560 7.862512 AAAATTTCAGCCAATTTTGAGTTCA 57.137 28.000 9.62 0.00 42.29 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.