Multiple sequence alignment - TraesCS7D01G137700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G137700 chr7D 100.000 3122 0 0 1 3122 88340623 88337502 0.000000e+00 5766.0
1 TraesCS7D01G137700 chr7D 81.016 669 92 17 1302 1940 88184115 88183452 1.670000e-137 499.0
2 TraesCS7D01G137700 chr7D 94.631 298 11 2 581 873 400893265 400893562 1.020000e-124 457.0
3 TraesCS7D01G137700 chr7D 94.881 293 11 1 585 873 482121652 482121360 3.670000e-124 455.0
4 TraesCS7D01G137700 chr7D 79.242 660 96 21 1573 2193 88878542 88877885 3.720000e-114 422.0
5 TraesCS7D01G137700 chr7D 81.006 537 71 16 1196 1729 88319889 88319381 6.270000e-107 398.0
6 TraesCS7D01G137700 chr7D 81.853 259 27 14 948 1190 88320713 88320459 1.900000e-47 200.0
7 TraesCS7D01G137700 chr7A 90.328 1892 133 20 1271 3122 89904718 89902837 0.000000e+00 2435.0
8 TraesCS7D01G137700 chr7A 82.797 1087 115 38 1202 2237 89910427 89909362 0.000000e+00 905.0
9 TraesCS7D01G137700 chr7A 79.331 658 96 20 1573 2193 90225909 90225255 2.880000e-115 425.0
10 TraesCS7D01G137700 chr7A 92.718 206 9 1 991 1190 89905529 89905324 3.050000e-75 292.0
11 TraesCS7D01G137700 chr7A 92.188 64 4 1 887 950 89905606 89905544 4.290000e-14 89.8
12 TraesCS7D01G137700 chr7A 78.302 106 19 3 1183 1285 90226282 90226178 7.230000e-07 65.8
13 TraesCS7D01G137700 chr7B 90.903 1561 98 25 1173 2704 38443519 38441974 0.000000e+00 2056.0
14 TraesCS7D01G137700 chr7B 81.801 1088 123 37 1202 2232 38611049 38609980 0.000000e+00 843.0
15 TraesCS7D01G137700 chr7B 81.198 601 60 30 1 584 38444927 38444363 4.780000e-118 435.0
16 TraesCS7D01G137700 chr7B 79.483 658 95 23 1573 2193 39171350 39170696 6.190000e-117 431.0
17 TraesCS7D01G137700 chr7B 90.997 311 13 7 887 1190 38444353 38444051 3.750000e-109 405.0
18 TraesCS7D01G137700 chr7B 85.096 208 17 8 996 1190 38375501 38375295 1.900000e-47 200.0
19 TraesCS7D01G137700 chr7B 75.472 265 40 13 97 359 245157899 245157658 4.260000e-19 106.0
20 TraesCS7D01G137700 chr3D 95.254 295 9 2 584 873 565409929 565409635 2.190000e-126 462.0
21 TraesCS7D01G137700 chr3D 94.576 295 12 1 583 873 308276455 308276749 1.320000e-123 453.0
22 TraesCS7D01G137700 chr4D 94.898 294 11 1 584 873 228107389 228107096 1.020000e-124 457.0
23 TraesCS7D01G137700 chr6D 94.898 294 10 2 585 873 40836182 40836475 3.670000e-124 455.0
24 TraesCS7D01G137700 chr2D 94.898 294 10 2 585 873 24923480 24923187 3.670000e-124 455.0
25 TraesCS7D01G137700 chr5D 94.595 296 11 2 583 873 62095541 62095836 1.320000e-123 453.0
26 TraesCS7D01G137700 chr5D 93.506 308 13 4 573 873 513027729 513027422 4.750000e-123 451.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G137700 chr7D 88337502 88340623 3121 True 5766.000000 5766 100.000000 1 3122 1 chr7D.!!$R2 3121
1 TraesCS7D01G137700 chr7D 88183452 88184115 663 True 499.000000 499 81.016000 1302 1940 1 chr7D.!!$R1 638
2 TraesCS7D01G137700 chr7D 88877885 88878542 657 True 422.000000 422 79.242000 1573 2193 1 chr7D.!!$R3 620
3 TraesCS7D01G137700 chr7D 88319381 88320713 1332 True 299.000000 398 81.429500 948 1729 2 chr7D.!!$R5 781
4 TraesCS7D01G137700 chr7A 89902837 89910427 7590 True 930.450000 2435 89.507750 887 3122 4 chr7A.!!$R1 2235
5 TraesCS7D01G137700 chr7A 90225255 90226282 1027 True 245.400000 425 78.816500 1183 2193 2 chr7A.!!$R2 1010
6 TraesCS7D01G137700 chr7B 38441974 38444927 2953 True 965.333333 2056 87.699333 1 2704 3 chr7B.!!$R5 2703
7 TraesCS7D01G137700 chr7B 38609980 38611049 1069 True 843.000000 843 81.801000 1202 2232 1 chr7B.!!$R2 1030
8 TraesCS7D01G137700 chr7B 39170696 39171350 654 True 431.000000 431 79.483000 1573 2193 1 chr7B.!!$R3 620

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
635 640 0.034089 GGAATGGGAGTTGAGGGGTG 60.034 60.0 0.0 0.0 0.0 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2213 7460 0.101219 GGCCCAGCTAAATCTTTGCG 59.899 55.0 0.0 0.0 0.0 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 35 2.209838 CGAAGGATGTGCGTAGACAT 57.790 50.000 0.00 0.00 39.34 3.06
38 43 7.478520 AGGATGTGCGTAGACATATTTTAAC 57.521 36.000 0.00 0.00 36.67 2.01
41 46 8.395633 GGATGTGCGTAGACATATTTTAACTTT 58.604 33.333 0.00 0.00 36.67 2.66
62 67 9.950680 AACTTTAGATACATTGGCATTTATTCG 57.049 29.630 0.00 0.00 0.00 3.34
68 73 9.071276 AGATACATTGGCATTTATTCGATTTCT 57.929 29.630 0.00 0.00 0.00 2.52
87 92 6.710692 TTTCTACGAAAAGTAATTCCGGAC 57.289 37.500 1.83 0.00 34.45 4.79
89 94 5.969423 TCTACGAAAAGTAATTCCGGACAT 58.031 37.500 1.83 0.00 34.45 3.06
93 98 4.510340 CGAAAAGTAATTCCGGACATAGGG 59.490 45.833 1.83 0.00 0.00 3.53
105 110 5.479375 TCCGGACATAGGGAGTACAATATTC 59.521 44.000 0.00 0.00 0.00 1.75
119 124 6.835488 AGTACAATATTCCTCACCATGCAATT 59.165 34.615 0.00 0.00 0.00 2.32
120 125 6.152932 ACAATATTCCTCACCATGCAATTC 57.847 37.500 0.00 0.00 0.00 2.17
178 183 4.371786 GTGAAGTCACACACATGAGAAGA 58.628 43.478 0.00 0.00 45.75 2.87
212 217 6.270815 CGCAGTTTATTTAGGCTCTACACTA 58.729 40.000 0.00 0.00 0.00 2.74
260 265 7.976135 ATCATTGAATCATTACCACTAGAGC 57.024 36.000 0.00 0.00 0.00 4.09
263 268 8.144478 TCATTGAATCATTACCACTAGAGCTAC 58.856 37.037 0.00 0.00 0.00 3.58
277 282 8.589338 CCACTAGAGCTACCAATATATGAAGTT 58.411 37.037 0.00 0.00 0.00 2.66
323 328 7.672983 AGCGTTATCTTATTTGATATGTGGG 57.327 36.000 0.00 0.00 0.00 4.61
324 329 7.224297 AGCGTTATCTTATTTGATATGTGGGT 58.776 34.615 0.00 0.00 0.00 4.51
325 330 8.372459 AGCGTTATCTTATTTGATATGTGGGTA 58.628 33.333 0.00 0.00 0.00 3.69
326 331 9.162764 GCGTTATCTTATTTGATATGTGGGTAT 57.837 33.333 0.00 0.00 0.00 2.73
356 361 6.998968 AAAAATCCACAACAAATTCAAGCA 57.001 29.167 0.00 0.00 0.00 3.91
357 362 6.607735 AAAATCCACAACAAATTCAAGCAG 57.392 33.333 0.00 0.00 0.00 4.24
360 365 1.788308 CACAACAAATTCAAGCAGCGG 59.212 47.619 0.00 0.00 0.00 5.52
361 366 1.269726 ACAACAAATTCAAGCAGCGGG 60.270 47.619 0.00 0.00 0.00 6.13
371 376 2.709475 GCAGCGGGCGTCATTTAG 59.291 61.111 0.00 0.00 0.00 1.85
372 377 2.106683 GCAGCGGGCGTCATTTAGT 61.107 57.895 0.00 0.00 0.00 2.24
373 378 1.644786 GCAGCGGGCGTCATTTAGTT 61.645 55.000 0.00 0.00 0.00 2.24
374 379 1.647346 CAGCGGGCGTCATTTAGTTA 58.353 50.000 0.00 0.00 0.00 2.24
375 380 1.593006 CAGCGGGCGTCATTTAGTTAG 59.407 52.381 0.00 0.00 0.00 2.34
376 381 0.935196 GCGGGCGTCATTTAGTTAGG 59.065 55.000 0.00 0.00 0.00 2.69
378 383 1.134610 CGGGCGTCATTTAGTTAGGGT 60.135 52.381 0.00 0.00 0.00 4.34
379 384 2.558378 GGGCGTCATTTAGTTAGGGTC 58.442 52.381 0.00 0.00 0.00 4.46
380 385 2.558378 GGCGTCATTTAGTTAGGGTCC 58.442 52.381 0.00 0.00 0.00 4.46
382 387 3.602483 GCGTCATTTAGTTAGGGTCCAA 58.398 45.455 0.00 0.00 0.00 3.53
384 389 4.638865 GCGTCATTTAGTTAGGGTCCAAAT 59.361 41.667 0.00 0.00 0.00 2.32
385 390 5.124936 GCGTCATTTAGTTAGGGTCCAAATT 59.875 40.000 0.00 0.00 0.00 1.82
387 392 6.373216 CGTCATTTAGTTAGGGTCCAAATTGA 59.627 38.462 0.00 0.00 0.00 2.57
388 393 7.094549 CGTCATTTAGTTAGGGTCCAAATTGAA 60.095 37.037 0.00 0.00 0.00 2.69
389 394 8.581578 GTCATTTAGTTAGGGTCCAAATTGAAA 58.418 33.333 0.00 0.00 0.00 2.69
390 395 8.581578 TCATTTAGTTAGGGTCCAAATTGAAAC 58.418 33.333 0.00 0.00 0.00 2.78
393 398 5.464069 AGTTAGGGTCCAAATTGAAACCTT 58.536 37.500 0.00 0.84 32.22 3.50
396 401 3.641436 AGGGTCCAAATTGAAACCTTGAC 59.359 43.478 14.23 3.49 32.22 3.18
397 402 3.641436 GGGTCCAAATTGAAACCTTGACT 59.359 43.478 14.23 0.00 32.22 3.41
398 403 4.262036 GGGTCCAAATTGAAACCTTGACTC 60.262 45.833 14.23 0.38 32.22 3.36
399 404 4.584743 GGTCCAAATTGAAACCTTGACTCT 59.415 41.667 9.35 0.00 0.00 3.24
400 405 5.768164 GGTCCAAATTGAAACCTTGACTCTA 59.232 40.000 9.35 0.00 0.00 2.43
401 406 6.294010 GGTCCAAATTGAAACCTTGACTCTAC 60.294 42.308 9.35 0.00 0.00 2.59
403 408 5.048013 CCAAATTGAAACCTTGACTCTACCC 60.048 44.000 0.00 0.00 0.00 3.69
404 409 5.584551 AATTGAAACCTTGACTCTACCCT 57.415 39.130 0.00 0.00 0.00 4.34
405 410 5.584551 ATTGAAACCTTGACTCTACCCTT 57.415 39.130 0.00 0.00 0.00 3.95
406 411 5.382664 TTGAAACCTTGACTCTACCCTTT 57.617 39.130 0.00 0.00 0.00 3.11
407 412 5.382664 TGAAACCTTGACTCTACCCTTTT 57.617 39.130 0.00 0.00 0.00 2.27
408 413 5.374071 TGAAACCTTGACTCTACCCTTTTC 58.626 41.667 0.00 0.00 0.00 2.29
409 414 5.132144 TGAAACCTTGACTCTACCCTTTTCT 59.868 40.000 0.00 0.00 0.00 2.52
410 415 5.648330 AACCTTGACTCTACCCTTTTCTT 57.352 39.130 0.00 0.00 0.00 2.52
412 417 6.758806 ACCTTGACTCTACCCTTTTCTTTA 57.241 37.500 0.00 0.00 0.00 1.85
413 418 6.770542 ACCTTGACTCTACCCTTTTCTTTAG 58.229 40.000 0.00 0.00 0.00 1.85
414 419 6.174049 CCTTGACTCTACCCTTTTCTTTAGG 58.826 44.000 0.00 0.00 0.00 2.69
434 439 3.336138 GGAAACCTTGACTCTACCCTG 57.664 52.381 0.00 0.00 0.00 4.45
435 440 2.904434 GGAAACCTTGACTCTACCCTGA 59.096 50.000 0.00 0.00 0.00 3.86
436 441 3.306849 GGAAACCTTGACTCTACCCTGAC 60.307 52.174 0.00 0.00 0.00 3.51
437 442 3.261818 AACCTTGACTCTACCCTGACT 57.738 47.619 0.00 0.00 0.00 3.41
438 443 4.399483 AACCTTGACTCTACCCTGACTA 57.601 45.455 0.00 0.00 0.00 2.59
439 444 4.611564 ACCTTGACTCTACCCTGACTAT 57.388 45.455 0.00 0.00 0.00 2.12
440 445 5.728937 ACCTTGACTCTACCCTGACTATA 57.271 43.478 0.00 0.00 0.00 1.31
441 446 5.447757 ACCTTGACTCTACCCTGACTATAC 58.552 45.833 0.00 0.00 0.00 1.47
442 447 4.828387 CCTTGACTCTACCCTGACTATACC 59.172 50.000 0.00 0.00 0.00 2.73
444 449 3.789840 TGACTCTACCCTGACTATACCCA 59.210 47.826 0.00 0.00 0.00 4.51
445 450 4.419200 TGACTCTACCCTGACTATACCCAT 59.581 45.833 0.00 0.00 0.00 4.00
446 451 5.613973 TGACTCTACCCTGACTATACCCATA 59.386 44.000 0.00 0.00 0.00 2.74
447 452 6.277283 TGACTCTACCCTGACTATACCCATAT 59.723 42.308 0.00 0.00 0.00 1.78
448 453 7.117331 ACTCTACCCTGACTATACCCATATT 57.883 40.000 0.00 0.00 0.00 1.28
449 454 7.183460 ACTCTACCCTGACTATACCCATATTC 58.817 42.308 0.00 0.00 0.00 1.75
450 455 6.500336 TCTACCCTGACTATACCCATATTCC 58.500 44.000 0.00 0.00 0.00 3.01
451 456 5.101254 ACCCTGACTATACCCATATTCCA 57.899 43.478 0.00 0.00 0.00 3.53
452 457 5.676125 ACCCTGACTATACCCATATTCCAT 58.324 41.667 0.00 0.00 0.00 3.41
454 459 5.131142 CCCTGACTATACCCATATTCCATCC 59.869 48.000 0.00 0.00 0.00 3.51
455 460 5.966935 CCTGACTATACCCATATTCCATCCT 59.033 44.000 0.00 0.00 0.00 3.24
457 462 5.964477 TGACTATACCCATATTCCATCCTCC 59.036 44.000 0.00 0.00 0.00 4.30
458 463 5.927465 ACTATACCCATATTCCATCCTCCA 58.073 41.667 0.00 0.00 0.00 3.86
459 464 5.966935 ACTATACCCATATTCCATCCTCCAG 59.033 44.000 0.00 0.00 0.00 3.86
475 480 6.509523 TCCTCCAGGAGAAAAGAAGTAAAA 57.490 37.500 19.21 0.00 39.78 1.52
476 481 6.906848 TCCTCCAGGAGAAAAGAAGTAAAAA 58.093 36.000 19.21 0.00 39.78 1.94
478 483 8.004801 TCCTCCAGGAGAAAAGAAGTAAAAATT 58.995 33.333 19.21 0.00 39.78 1.82
479 484 8.642432 CCTCCAGGAGAAAAGAAGTAAAAATTT 58.358 33.333 19.21 0.00 37.39 1.82
481 486 9.421399 TCCAGGAGAAAAGAAGTAAAAATTTCT 57.579 29.630 0.00 0.00 41.60 2.52
513 518 9.603921 ATCTAAATTTACCATGAATGCAAAAGG 57.396 29.630 0.00 0.00 0.00 3.11
514 519 8.811017 TCTAAATTTACCATGAATGCAAAAGGA 58.189 29.630 0.00 0.00 0.00 3.36
515 520 9.603921 CTAAATTTACCATGAATGCAAAAGGAT 57.396 29.630 0.00 0.00 0.00 3.24
517 522 9.603921 AAATTTACCATGAATGCAAAAGGATAG 57.396 29.630 0.00 0.00 0.00 2.08
519 524 8.537728 TTTACCATGAATGCAAAAGGATAGAT 57.462 30.769 0.00 0.00 0.00 1.98
521 526 7.756395 ACCATGAATGCAAAAGGATAGATAG 57.244 36.000 0.00 0.00 0.00 2.08
522 527 6.718454 ACCATGAATGCAAAAGGATAGATAGG 59.282 38.462 0.00 0.00 0.00 2.57
524 529 7.309012 CCATGAATGCAAAAGGATAGATAGGTG 60.309 40.741 0.00 0.00 0.00 4.00
525 530 6.662755 TGAATGCAAAAGGATAGATAGGTGT 58.337 36.000 0.00 0.00 0.00 4.16
526 531 6.543465 TGAATGCAAAAGGATAGATAGGTGTG 59.457 38.462 0.00 0.00 0.00 3.82
527 532 4.199310 TGCAAAAGGATAGATAGGTGTGC 58.801 43.478 0.00 0.00 0.00 4.57
528 533 4.199310 GCAAAAGGATAGATAGGTGTGCA 58.801 43.478 0.00 0.00 0.00 4.57
529 534 4.823989 GCAAAAGGATAGATAGGTGTGCAT 59.176 41.667 0.00 0.00 0.00 3.96
530 535 5.278169 GCAAAAGGATAGATAGGTGTGCATG 60.278 44.000 0.00 0.00 0.00 4.06
532 537 3.246301 AGGATAGATAGGTGTGCATGCT 58.754 45.455 20.33 0.00 0.00 3.79
534 539 2.916702 TAGATAGGTGTGCATGCTGG 57.083 50.000 20.33 0.00 0.00 4.85
535 540 0.182061 AGATAGGTGTGCATGCTGGG 59.818 55.000 20.33 0.00 0.00 4.45
536 541 0.107017 GATAGGTGTGCATGCTGGGT 60.107 55.000 20.33 2.35 0.00 4.51
537 542 0.107017 ATAGGTGTGCATGCTGGGTC 60.107 55.000 20.33 4.97 0.00 4.46
538 543 2.196997 TAGGTGTGCATGCTGGGTCC 62.197 60.000 20.33 13.42 0.00 4.46
539 544 3.064324 GTGTGCATGCTGGGTCCC 61.064 66.667 20.33 0.00 0.00 4.46
540 545 3.578286 TGTGCATGCTGGGTCCCA 61.578 61.111 20.33 11.11 0.00 4.37
542 547 1.907807 GTGCATGCTGGGTCCCAAA 60.908 57.895 20.33 3.50 30.80 3.28
543 548 1.152376 TGCATGCTGGGTCCCAAAA 60.152 52.632 20.33 3.09 30.80 2.44
544 549 1.293179 GCATGCTGGGTCCCAAAAC 59.707 57.895 12.96 5.17 30.80 2.43
545 550 1.586028 CATGCTGGGTCCCAAAACG 59.414 57.895 12.96 0.73 30.80 3.60
546 551 0.893270 CATGCTGGGTCCCAAAACGA 60.893 55.000 12.96 0.00 30.80 3.85
549 554 1.971695 CTGGGTCCCAAAACGAGGC 60.972 63.158 12.96 0.00 30.80 4.70
550 555 3.053896 GGGTCCCAAAACGAGGCG 61.054 66.667 1.78 0.00 0.00 5.52
551 556 3.733960 GGTCCCAAAACGAGGCGC 61.734 66.667 0.00 0.00 0.00 6.53
552 557 2.668550 GTCCCAAAACGAGGCGCT 60.669 61.111 7.64 0.00 0.00 5.92
553 558 2.112297 TCCCAAAACGAGGCGCTT 59.888 55.556 7.64 0.00 0.00 4.68
554 559 1.964373 TCCCAAAACGAGGCGCTTC 60.964 57.895 9.88 9.88 0.00 3.86
555 560 2.561373 CCAAAACGAGGCGCTTCC 59.439 61.111 14.49 0.00 0.00 3.46
556 561 2.561373 CAAAACGAGGCGCTTCCC 59.439 61.111 14.49 0.00 34.51 3.97
558 563 2.258726 AAAACGAGGCGCTTCCCAC 61.259 57.895 14.49 0.00 34.51 4.61
563 568 4.078516 AGGCGCTTCCCACGGTAC 62.079 66.667 7.64 0.00 34.51 3.34
564 569 4.382320 GGCGCTTCCCACGGTACA 62.382 66.667 7.64 0.00 0.00 2.90
565 570 2.813908 GCGCTTCCCACGGTACAG 60.814 66.667 0.00 0.00 0.00 2.74
566 571 2.967397 CGCTTCCCACGGTACAGA 59.033 61.111 0.00 0.00 0.00 3.41
567 572 1.445582 CGCTTCCCACGGTACAGAC 60.446 63.158 0.00 0.00 0.00 3.51
568 573 1.079336 GCTTCCCACGGTACAGACC 60.079 63.158 0.00 0.00 43.03 3.85
569 574 1.595357 CTTCCCACGGTACAGACCC 59.405 63.158 0.00 0.00 43.64 4.46
576 581 3.384348 GGTACAGACCCGAGCCAA 58.616 61.111 0.00 0.00 40.23 4.52
577 582 1.675219 GGTACAGACCCGAGCCAAA 59.325 57.895 0.00 0.00 40.23 3.28
578 583 0.035739 GGTACAGACCCGAGCCAAAA 59.964 55.000 0.00 0.00 40.23 2.44
579 584 1.439679 GTACAGACCCGAGCCAAAAG 58.560 55.000 0.00 0.00 0.00 2.27
580 585 0.321298 TACAGACCCGAGCCAAAAGC 60.321 55.000 0.00 0.00 44.25 3.51
596 601 3.420943 GCAGACAGCGTGTTTGGT 58.579 55.556 9.50 0.00 33.58 3.67
598 603 0.317020 GCAGACAGCGTGTTTGGTTC 60.317 55.000 9.50 0.00 33.58 3.62
599 604 0.042188 CAGACAGCGTGTTTGGTTCG 60.042 55.000 2.22 0.00 29.80 3.95
602 607 1.890041 CAGCGTGTTTGGTTCGGGA 60.890 57.895 0.00 0.00 0.00 5.14
604 609 1.595929 GCGTGTTTGGTTCGGGAGA 60.596 57.895 0.00 0.00 0.00 3.71
618 623 2.107726 TCGGGAGAATTCGAGATAGGGA 59.892 50.000 0.00 0.00 34.75 4.20
619 624 2.891580 CGGGAGAATTCGAGATAGGGAA 59.108 50.000 0.00 0.00 0.00 3.97
620 625 3.511934 CGGGAGAATTCGAGATAGGGAAT 59.488 47.826 0.00 0.00 34.48 3.01
621 626 4.619394 CGGGAGAATTCGAGATAGGGAATG 60.619 50.000 0.00 0.00 33.40 2.67
622 627 4.323104 GGGAGAATTCGAGATAGGGAATGG 60.323 50.000 0.00 0.00 33.40 3.16
623 628 4.323104 GGAGAATTCGAGATAGGGAATGGG 60.323 50.000 0.00 0.00 33.40 4.00
625 630 4.530161 AGAATTCGAGATAGGGAATGGGAG 59.470 45.833 0.00 0.00 33.40 4.30
626 631 3.330126 TTCGAGATAGGGAATGGGAGT 57.670 47.619 0.00 0.00 0.00 3.85
627 632 3.330126 TCGAGATAGGGAATGGGAGTT 57.670 47.619 0.00 0.00 0.00 3.01
630 635 3.006323 CGAGATAGGGAATGGGAGTTGAG 59.994 52.174 0.00 0.00 0.00 3.02
631 636 3.321950 AGATAGGGAATGGGAGTTGAGG 58.678 50.000 0.00 0.00 0.00 3.86
632 637 1.893315 TAGGGAATGGGAGTTGAGGG 58.107 55.000 0.00 0.00 0.00 4.30
633 638 0.921256 AGGGAATGGGAGTTGAGGGG 60.921 60.000 0.00 0.00 0.00 4.79
634 639 1.214992 GGGAATGGGAGTTGAGGGGT 61.215 60.000 0.00 0.00 0.00 4.95
635 640 0.034089 GGAATGGGAGTTGAGGGGTG 60.034 60.000 0.00 0.00 0.00 4.61
636 641 0.991920 GAATGGGAGTTGAGGGGTGA 59.008 55.000 0.00 0.00 0.00 4.02
637 642 0.995024 AATGGGAGTTGAGGGGTGAG 59.005 55.000 0.00 0.00 0.00 3.51
638 643 0.916358 ATGGGAGTTGAGGGGTGAGG 60.916 60.000 0.00 0.00 0.00 3.86
639 644 1.229529 GGGAGTTGAGGGGTGAGGA 60.230 63.158 0.00 0.00 0.00 3.71
642 647 1.623834 GGAGTTGAGGGGTGAGGAGAT 60.624 57.143 0.00 0.00 0.00 2.75
643 648 2.192263 GAGTTGAGGGGTGAGGAGATT 58.808 52.381 0.00 0.00 0.00 2.40
644 649 3.375699 GAGTTGAGGGGTGAGGAGATTA 58.624 50.000 0.00 0.00 0.00 1.75
645 650 3.775316 GAGTTGAGGGGTGAGGAGATTAA 59.225 47.826 0.00 0.00 0.00 1.40
646 651 4.175962 AGTTGAGGGGTGAGGAGATTAAA 58.824 43.478 0.00 0.00 0.00 1.52
647 652 4.601857 AGTTGAGGGGTGAGGAGATTAAAA 59.398 41.667 0.00 0.00 0.00 1.52
648 653 4.844349 TGAGGGGTGAGGAGATTAAAAG 57.156 45.455 0.00 0.00 0.00 2.27
649 654 4.175962 TGAGGGGTGAGGAGATTAAAAGT 58.824 43.478 0.00 0.00 0.00 2.66
650 655 4.601857 TGAGGGGTGAGGAGATTAAAAGTT 59.398 41.667 0.00 0.00 0.00 2.66
651 656 5.180810 AGGGGTGAGGAGATTAAAAGTTC 57.819 43.478 0.00 0.00 0.00 3.01
652 657 4.601857 AGGGGTGAGGAGATTAAAAGTTCA 59.398 41.667 0.00 0.00 0.00 3.18
653 658 4.700692 GGGGTGAGGAGATTAAAAGTTCAC 59.299 45.833 0.00 0.00 34.30 3.18
654 659 5.515008 GGGGTGAGGAGATTAAAAGTTCACT 60.515 44.000 0.00 0.00 35.16 3.41
656 661 5.998363 GGTGAGGAGATTAAAAGTTCACTGT 59.002 40.000 0.00 0.00 35.16 3.55
658 663 7.013369 GGTGAGGAGATTAAAAGTTCACTGTTT 59.987 37.037 0.00 0.00 35.16 2.83
661 666 8.697507 AGGAGATTAAAAGTTCACTGTTTGAT 57.302 30.769 0.00 0.00 32.84 2.57
662 667 9.136323 AGGAGATTAAAAGTTCACTGTTTGATT 57.864 29.630 0.00 0.00 32.84 2.57
668 673 6.884280 AAAGTTCACTGTTTGATTAGAGGG 57.116 37.500 0.00 0.00 32.84 4.30
669 674 5.825593 AGTTCACTGTTTGATTAGAGGGA 57.174 39.130 0.00 0.00 32.84 4.20
670 675 6.187727 AGTTCACTGTTTGATTAGAGGGAA 57.812 37.500 0.00 0.00 32.84 3.97
671 676 6.784031 AGTTCACTGTTTGATTAGAGGGAAT 58.216 36.000 0.00 0.00 32.84 3.01
672 677 6.656693 AGTTCACTGTTTGATTAGAGGGAATG 59.343 38.462 0.00 0.00 32.84 2.67
675 680 4.540099 ACTGTTTGATTAGAGGGAATGGGA 59.460 41.667 0.00 0.00 0.00 4.37
677 682 4.540099 TGTTTGATTAGAGGGAATGGGAGT 59.460 41.667 0.00 0.00 0.00 3.85
679 684 5.796502 TTGATTAGAGGGAATGGGAGTTT 57.203 39.130 0.00 0.00 0.00 2.66
680 685 6.901615 TTGATTAGAGGGAATGGGAGTTTA 57.098 37.500 0.00 0.00 0.00 2.01
681 686 6.500589 TGATTAGAGGGAATGGGAGTTTAG 57.499 41.667 0.00 0.00 0.00 1.85
683 688 3.508952 AGAGGGAATGGGAGTTTAGGA 57.491 47.619 0.00 0.00 0.00 2.94
684 689 3.815507 AGAGGGAATGGGAGTTTAGGAA 58.184 45.455 0.00 0.00 0.00 3.36
685 690 3.783082 AGAGGGAATGGGAGTTTAGGAAG 59.217 47.826 0.00 0.00 0.00 3.46
687 692 2.091830 GGGAATGGGAGTTTAGGAAGGG 60.092 54.545 0.00 0.00 0.00 3.95
688 693 2.091830 GGAATGGGAGTTTAGGAAGGGG 60.092 54.545 0.00 0.00 0.00 4.79
691 696 2.942905 TGGGAGTTTAGGAAGGGGAAT 58.057 47.619 0.00 0.00 0.00 3.01
692 697 2.580783 TGGGAGTTTAGGAAGGGGAATG 59.419 50.000 0.00 0.00 0.00 2.67
693 698 2.091830 GGGAGTTTAGGAAGGGGAATGG 60.092 54.545 0.00 0.00 0.00 3.16
695 700 2.850568 GAGTTTAGGAAGGGGAATGGGA 59.149 50.000 0.00 0.00 0.00 4.37
696 701 2.853077 AGTTTAGGAAGGGGAATGGGAG 59.147 50.000 0.00 0.00 0.00 4.30
697 702 2.581246 GTTTAGGAAGGGGAATGGGAGT 59.419 50.000 0.00 0.00 0.00 3.85
698 703 2.680439 TAGGAAGGGGAATGGGAGTT 57.320 50.000 0.00 0.00 0.00 3.01
699 704 1.002857 AGGAAGGGGAATGGGAGTTG 58.997 55.000 0.00 0.00 0.00 3.16
700 705 0.999712 GGAAGGGGAATGGGAGTTGA 59.000 55.000 0.00 0.00 0.00 3.18
701 706 1.064389 GGAAGGGGAATGGGAGTTGAG 60.064 57.143 0.00 0.00 0.00 3.02
703 708 0.121197 AGGGGAATGGGAGTTGAGGA 59.879 55.000 0.00 0.00 0.00 3.71
704 709 0.999712 GGGGAATGGGAGTTGAGGAA 59.000 55.000 0.00 0.00 0.00 3.36
705 710 1.064389 GGGGAATGGGAGTTGAGGAAG 60.064 57.143 0.00 0.00 0.00 3.46
706 711 1.683319 GGGAATGGGAGTTGAGGAAGC 60.683 57.143 0.00 0.00 0.00 3.86
709 714 1.075601 ATGGGAGTTGAGGAAGCCAA 58.924 50.000 0.00 0.00 0.00 4.52
710 715 1.075601 TGGGAGTTGAGGAAGCCAAT 58.924 50.000 0.00 0.00 0.00 3.16
712 717 2.095461 GGGAGTTGAGGAAGCCAATTC 58.905 52.381 0.00 0.00 37.17 2.17
723 728 4.655762 GAAGCCAATTCCCACCTATTTC 57.344 45.455 0.00 0.00 31.14 2.17
724 729 4.281657 GAAGCCAATTCCCACCTATTTCT 58.718 43.478 0.00 0.00 31.14 2.52
725 730 4.337264 AGCCAATTCCCACCTATTTCTT 57.663 40.909 0.00 0.00 0.00 2.52
727 732 3.384789 GCCAATTCCCACCTATTTCTTCC 59.615 47.826 0.00 0.00 0.00 3.46
728 733 3.960755 CCAATTCCCACCTATTTCTTCCC 59.039 47.826 0.00 0.00 0.00 3.97
729 734 4.571792 CCAATTCCCACCTATTTCTTCCCA 60.572 45.833 0.00 0.00 0.00 4.37
731 736 2.205342 TCCCACCTATTTCTTCCCAGG 58.795 52.381 0.00 0.00 0.00 4.45
734 739 1.923148 CACCTATTTCTTCCCAGGGGT 59.077 52.381 5.33 0.00 36.47 4.95
736 741 3.118000 CACCTATTTCTTCCCAGGGGTAC 60.118 52.174 5.33 0.00 36.47 3.34
753 758 2.934553 GGTACCCTGTTAATTCGTGAGC 59.065 50.000 0.00 0.00 0.00 4.26
754 759 2.851263 ACCCTGTTAATTCGTGAGCA 57.149 45.000 0.00 0.00 0.00 4.26
758 763 3.589988 CCTGTTAATTCGTGAGCAGAGT 58.410 45.455 0.00 0.00 0.00 3.24
759 764 3.997021 CCTGTTAATTCGTGAGCAGAGTT 59.003 43.478 0.00 0.00 0.00 3.01
760 765 4.452455 CCTGTTAATTCGTGAGCAGAGTTT 59.548 41.667 0.00 0.00 0.00 2.66
761 766 5.049405 CCTGTTAATTCGTGAGCAGAGTTTT 60.049 40.000 0.00 0.00 0.00 2.43
762 767 6.147164 CCTGTTAATTCGTGAGCAGAGTTTTA 59.853 38.462 0.00 0.00 0.00 1.52
763 768 7.148407 CCTGTTAATTCGTGAGCAGAGTTTTAT 60.148 37.037 0.00 0.00 0.00 1.40
764 769 7.739295 TGTTAATTCGTGAGCAGAGTTTTATC 58.261 34.615 0.00 0.00 0.00 1.75
765 770 5.803020 AATTCGTGAGCAGAGTTTTATCC 57.197 39.130 0.00 0.00 0.00 2.59
766 771 3.247006 TCGTGAGCAGAGTTTTATCCC 57.753 47.619 0.00 0.00 0.00 3.85
767 772 2.565391 TCGTGAGCAGAGTTTTATCCCA 59.435 45.455 0.00 0.00 0.00 4.37
768 773 2.673368 CGTGAGCAGAGTTTTATCCCAC 59.327 50.000 0.00 0.00 0.00 4.61
769 774 2.673368 GTGAGCAGAGTTTTATCCCACG 59.327 50.000 0.00 0.00 0.00 4.94
770 775 1.666189 GAGCAGAGTTTTATCCCACGC 59.334 52.381 0.00 0.00 0.00 5.34
771 776 1.279271 AGCAGAGTTTTATCCCACGCT 59.721 47.619 0.00 0.00 0.00 5.07
772 777 2.500098 AGCAGAGTTTTATCCCACGCTA 59.500 45.455 0.00 0.00 0.00 4.26
773 778 3.055385 AGCAGAGTTTTATCCCACGCTAA 60.055 43.478 0.00 0.00 0.00 3.09
774 779 3.877508 GCAGAGTTTTATCCCACGCTAAT 59.122 43.478 0.00 0.00 0.00 1.73
775 780 4.335594 GCAGAGTTTTATCCCACGCTAATT 59.664 41.667 0.00 0.00 0.00 1.40
776 781 5.526111 GCAGAGTTTTATCCCACGCTAATTA 59.474 40.000 0.00 0.00 0.00 1.40
777 782 6.292919 GCAGAGTTTTATCCCACGCTAATTAG 60.293 42.308 8.20 8.20 0.00 1.73
797 802 7.765695 ATTAGCATCATATACCAAACAAGGG 57.234 36.000 0.00 0.00 0.00 3.95
799 804 5.765510 AGCATCATATACCAAACAAGGGAA 58.234 37.500 0.00 0.00 0.00 3.97
801 806 6.266103 AGCATCATATACCAAACAAGGGAATG 59.734 38.462 0.00 0.00 0.00 2.67
802 807 6.265196 GCATCATATACCAAACAAGGGAATGA 59.735 38.462 0.00 0.00 31.97 2.57
803 808 7.522725 GCATCATATACCAAACAAGGGAATGAG 60.523 40.741 0.00 0.00 31.42 2.90
804 809 7.206789 TCATATACCAAACAAGGGAATGAGA 57.793 36.000 0.00 0.00 0.00 3.27
806 811 3.884037 ACCAAACAAGGGAATGAGAGT 57.116 42.857 0.00 0.00 0.00 3.24
807 812 4.993705 ACCAAACAAGGGAATGAGAGTA 57.006 40.909 0.00 0.00 0.00 2.59
808 813 5.319043 ACCAAACAAGGGAATGAGAGTAA 57.681 39.130 0.00 0.00 0.00 2.24
809 814 5.701224 ACCAAACAAGGGAATGAGAGTAAA 58.299 37.500 0.00 0.00 0.00 2.01
810 815 6.133356 ACCAAACAAGGGAATGAGAGTAAAA 58.867 36.000 0.00 0.00 0.00 1.52
811 816 6.609616 ACCAAACAAGGGAATGAGAGTAAAAA 59.390 34.615 0.00 0.00 0.00 1.94
812 817 7.290014 ACCAAACAAGGGAATGAGAGTAAAAAT 59.710 33.333 0.00 0.00 0.00 1.82
813 818 7.814587 CCAAACAAGGGAATGAGAGTAAAAATC 59.185 37.037 0.00 0.00 0.00 2.17
814 819 8.579863 CAAACAAGGGAATGAGAGTAAAAATCT 58.420 33.333 0.00 0.00 0.00 2.40
815 820 9.807921 AAACAAGGGAATGAGAGTAAAAATCTA 57.192 29.630 0.00 0.00 0.00 1.98
816 821 8.794335 ACAAGGGAATGAGAGTAAAAATCTAC 57.206 34.615 0.00 0.00 0.00 2.59
817 822 8.606830 ACAAGGGAATGAGAGTAAAAATCTACT 58.393 33.333 0.00 0.00 34.76 2.57
834 839 9.981460 AAAATCTACTTTTCATGACTAATCCCT 57.019 29.630 0.00 0.00 31.23 4.20
835 840 9.981460 AAATCTACTTTTCATGACTAATCCCTT 57.019 29.630 0.00 0.00 0.00 3.95
836 841 9.620259 AATCTACTTTTCATGACTAATCCCTTC 57.380 33.333 0.00 0.00 0.00 3.46
838 843 8.772250 TCTACTTTTCATGACTAATCCCTTCAT 58.228 33.333 0.00 0.00 0.00 2.57
843 848 9.527157 TTTTCATGACTAATCCCTTCATAAACA 57.473 29.630 0.00 0.00 0.00 2.83
844 849 8.506168 TTCATGACTAATCCCTTCATAAACAC 57.494 34.615 0.00 0.00 0.00 3.32
846 851 5.751586 TGACTAATCCCTTCATAAACACCC 58.248 41.667 0.00 0.00 0.00 4.61
847 852 5.491078 TGACTAATCCCTTCATAAACACCCT 59.509 40.000 0.00 0.00 0.00 4.34
848 853 6.011981 TGACTAATCCCTTCATAAACACCCTT 60.012 38.462 0.00 0.00 0.00 3.95
849 854 7.183112 TGACTAATCCCTTCATAAACACCCTTA 59.817 37.037 0.00 0.00 0.00 2.69
850 855 8.114301 ACTAATCCCTTCATAAACACCCTTAT 57.886 34.615 0.00 0.00 0.00 1.73
853 858 4.017958 TCCCTTCATAAACACCCTTATGCA 60.018 41.667 0.00 0.00 38.59 3.96
854 859 4.709397 CCCTTCATAAACACCCTTATGCAA 59.291 41.667 0.00 0.00 38.59 4.08
859 864 6.919721 TCATAAACACCCTTATGCAAACTTC 58.080 36.000 0.00 0.00 38.59 3.01
861 866 3.237268 ACACCCTTATGCAAACTTCCA 57.763 42.857 0.00 0.00 0.00 3.53
862 867 3.778265 ACACCCTTATGCAAACTTCCAT 58.222 40.909 0.00 0.00 0.00 3.41
863 868 4.159557 ACACCCTTATGCAAACTTCCATT 58.840 39.130 0.00 0.00 0.00 3.16
864 869 4.220602 ACACCCTTATGCAAACTTCCATTC 59.779 41.667 0.00 0.00 0.00 2.67
866 871 3.132824 CCCTTATGCAAACTTCCATTCCC 59.867 47.826 0.00 0.00 0.00 3.97
868 873 2.629017 ATGCAAACTTCCATTCCCCT 57.371 45.000 0.00 0.00 0.00 4.79
870 875 0.247460 GCAAACTTCCATTCCCCTGC 59.753 55.000 0.00 0.00 0.00 4.85
871 876 0.897621 CAAACTTCCATTCCCCTGCC 59.102 55.000 0.00 0.00 0.00 4.85
872 877 0.786435 AAACTTCCATTCCCCTGCCT 59.214 50.000 0.00 0.00 0.00 4.75
873 878 0.040204 AACTTCCATTCCCCTGCCTG 59.960 55.000 0.00 0.00 0.00 4.85
874 879 1.755783 CTTCCATTCCCCTGCCTGC 60.756 63.158 0.00 0.00 0.00 4.85
875 880 3.301222 TTCCATTCCCCTGCCTGCC 62.301 63.158 0.00 0.00 0.00 4.85
876 881 4.064768 CCATTCCCCTGCCTGCCA 62.065 66.667 0.00 0.00 0.00 4.92
877 882 2.037687 CATTCCCCTGCCTGCCAA 59.962 61.111 0.00 0.00 0.00 4.52
879 884 1.610379 ATTCCCCTGCCTGCCAAAC 60.610 57.895 0.00 0.00 0.00 2.93
880 885 2.384933 ATTCCCCTGCCTGCCAAACA 62.385 55.000 0.00 0.00 0.00 2.83
881 886 2.993264 CCCCTGCCTGCCAAACAG 60.993 66.667 0.00 0.00 46.77 3.16
906 4887 5.992217 GCTGAGAGTGGTAGAAAGAGAAAAA 59.008 40.000 0.00 0.00 0.00 1.94
1149 5154 1.448540 CGACGCCCTCTGCAAGAAT 60.449 57.895 0.00 0.00 46.34 2.40
1151 5156 1.424493 GACGCCCTCTGCAAGAATCG 61.424 60.000 0.00 0.00 46.34 3.34
1239 6354 4.499019 CGTTCAACTGTTGCCAAAGGTAAT 60.499 41.667 15.52 0.00 28.75 1.89
1289 6404 1.128200 ATTAGCACATACTCCCGGCA 58.872 50.000 0.00 0.00 0.00 5.69
1316 6432 5.047188 GGAATTTTACTGGTGTGGTTTGTG 58.953 41.667 0.00 0.00 0.00 3.33
1317 6433 5.394773 GGAATTTTACTGGTGTGGTTTGTGT 60.395 40.000 0.00 0.00 0.00 3.72
1413 6529 1.072505 GACGGGGCAGGTGAAAAGA 59.927 57.895 0.00 0.00 0.00 2.52
1570 6743 2.431942 CTGCCGTACCCGACACAC 60.432 66.667 0.00 0.00 35.63 3.82
1571 6744 2.913578 TGCCGTACCCGACACACT 60.914 61.111 0.00 0.00 35.63 3.55
1586 6759 2.600769 ACTCGACTGGAAGGCCGT 60.601 61.111 0.00 0.00 40.92 5.68
1608 6781 2.224257 GCAGAAGATTCTAGAGGGCCTG 60.224 54.545 12.95 0.00 35.34 4.85
1754 6950 5.476254 TGGATCAGCATCACATTGTTTGTTA 59.524 36.000 0.00 0.00 36.00 2.41
1813 7010 1.919956 CTACGCGACCTTCTCCACGT 61.920 60.000 15.93 0.00 37.53 4.49
1843 7040 1.157585 GGAGCTGGACGAAAAGGTTC 58.842 55.000 0.00 0.00 0.00 3.62
1849 7046 0.883370 GGACGAAAAGGTTCTGGCGT 60.883 55.000 0.00 0.00 34.39 5.68
2256 7503 3.068024 TGATTTGTTGCTGGTTTGGTCTC 59.932 43.478 0.00 0.00 0.00 3.36
2283 7530 2.424956 GGTTTCATGATCTGGCACTTCC 59.575 50.000 0.00 0.00 0.00 3.46
2318 7565 1.717937 GACGATGGTGCATGCAGTC 59.282 57.895 23.41 20.04 0.00 3.51
2341 7588 5.887598 TCAATGGGTTTCATGGTTCAGATAG 59.112 40.000 0.00 0.00 35.99 2.08
2358 7605 6.401394 TCAGATAGAAACTCACCATTCACTG 58.599 40.000 0.00 0.00 0.00 3.66
2366 7613 5.227569 ACTCACCATTCACTGTTCATGTA 57.772 39.130 0.00 0.00 0.00 2.29
2443 7702 3.441163 CGAATTTGCCATGATTCTGTGG 58.559 45.455 0.00 4.80 38.55 4.17
2464 7723 2.435805 GAGATCCAGGTCCAATGCTGTA 59.564 50.000 0.00 0.00 0.00 2.74
2510 7770 1.063764 TGCGGTTTACGTTTGTGTTCC 59.936 47.619 0.00 0.00 46.52 3.62
2514 7774 2.539344 GGTTTACGTTTGTGTTCCACGG 60.539 50.000 0.00 0.00 38.26 4.94
2583 7843 6.988622 ATCCATTTGGTGCAAAATATGTTG 57.011 33.333 0.81 0.81 36.90 3.33
2585 7845 5.931146 TCCATTTGGTGCAAAATATGTTGAC 59.069 36.000 9.96 5.01 36.90 3.18
2641 7901 2.344521 AAACAAGCGGCGTGGTTTCC 62.345 55.000 19.60 0.00 35.75 3.13
2662 7922 1.928868 TGCTCTGATGTCTGGTCTCA 58.071 50.000 0.00 0.00 0.00 3.27
2677 7937 5.884232 TCTGGTCTCATCTGAAAAATGATGG 59.116 40.000 0.00 0.00 40.13 3.51
2736 7997 6.493449 TTTCATTAAATCACATCGCAGTCA 57.507 33.333 0.00 0.00 0.00 3.41
2752 8013 3.309138 GCAGTCAGATGTAGTGCAATCAG 59.691 47.826 0.00 0.00 34.18 2.90
2759 8022 5.292834 CAGATGTAGTGCAATCAGTAACCTG 59.707 44.000 0.00 0.00 40.25 4.00
2776 8039 0.038744 CTGGCATTGGAGTGACCCTT 59.961 55.000 0.00 0.00 38.00 3.95
2783 8046 1.153349 GGAGTGACCCTTGCCGATC 60.153 63.158 0.00 0.00 0.00 3.69
2794 8057 0.391130 TTGCCGATCGGAAGACTTGG 60.391 55.000 37.64 8.13 46.97 3.61
2848 8111 4.429108 ACATTTGGTCAGTTTCGGTTTTG 58.571 39.130 0.00 0.00 0.00 2.44
2862 8125 1.404047 GGTTTTGTTGGGGCGATGATG 60.404 52.381 0.00 0.00 0.00 3.07
2878 8141 2.376109 TGATGAGGTTCGGAGTAGGTC 58.624 52.381 0.00 0.00 0.00 3.85
2879 8142 2.025226 TGATGAGGTTCGGAGTAGGTCT 60.025 50.000 0.00 0.00 0.00 3.85
2880 8143 1.835494 TGAGGTTCGGAGTAGGTCTG 58.165 55.000 0.00 0.00 0.00 3.51
2952 8215 3.139077 ACAACGTCCAATTTCACTCCTC 58.861 45.455 0.00 0.00 0.00 3.71
2953 8216 2.080286 ACGTCCAATTTCACTCCTCG 57.920 50.000 0.00 0.00 0.00 4.63
3007 8270 7.119709 TCGATGGTGTTTTAGATATCCAGAA 57.880 36.000 0.00 0.00 0.00 3.02
3023 8286 1.402968 CAGAATGGGGATGTTGCTTCG 59.597 52.381 0.00 0.00 0.00 3.79
3032 8295 0.523072 ATGTTGCTTCGCACATGACC 59.477 50.000 0.00 0.00 38.71 4.02
3042 8305 2.679336 TCGCACATGACCAATCATTGAG 59.321 45.455 0.00 0.00 43.40 3.02
3047 8310 4.095932 CACATGACCAATCATTGAGGAGTG 59.904 45.833 0.00 0.00 43.40 3.51
3052 8315 2.372264 CAATCATTGAGGAGTGTGGGG 58.628 52.381 0.00 0.00 0.00 4.96
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 1.067212 GTCTACGCACATCCTTCGGAT 59.933 52.381 0.00 0.00 44.21 4.18
11 12 2.209838 ATGTCTACGCACATCCTTCG 57.790 50.000 0.00 0.00 30.76 3.79
12 13 6.604735 AAAATATGTCTACGCACATCCTTC 57.395 37.500 0.00 0.00 38.07 3.46
14 15 7.272978 AGTTAAAATATGTCTACGCACATCCT 58.727 34.615 0.00 0.00 38.07 3.24
15 16 7.478520 AGTTAAAATATGTCTACGCACATCC 57.521 36.000 0.00 0.00 38.07 3.51
51 56 7.908601 ACTTTTCGTAGAAATCGAATAAATGCC 59.091 33.333 0.00 0.00 45.90 4.40
58 63 8.325997 CGGAATTACTTTTCGTAGAAATCGAAT 58.674 33.333 0.00 0.00 45.90 3.34
59 64 7.201461 CCGGAATTACTTTTCGTAGAAATCGAA 60.201 37.037 0.00 0.00 45.90 3.71
62 67 7.063780 TGTCCGGAATTACTTTTCGTAGAAATC 59.936 37.037 5.23 0.00 45.90 2.17
68 73 6.275335 CCTATGTCCGGAATTACTTTTCGTA 58.725 40.000 5.23 0.00 0.00 3.43
78 83 3.649843 TGTACTCCCTATGTCCGGAATT 58.350 45.455 5.23 0.00 0.00 2.17
87 92 6.270000 TGGTGAGGAATATTGTACTCCCTATG 59.730 42.308 0.00 0.00 0.00 2.23
89 94 5.784023 TGGTGAGGAATATTGTACTCCCTA 58.216 41.667 0.00 0.00 0.00 3.53
93 98 5.368145 TGCATGGTGAGGAATATTGTACTC 58.632 41.667 0.00 0.00 0.00 2.59
105 110 2.797087 GCATTCGAATTGCATGGTGAGG 60.797 50.000 20.47 4.20 0.00 3.86
166 171 4.393062 CGGCTTGTAATTCTTCTCATGTGT 59.607 41.667 0.00 0.00 0.00 3.72
167 172 4.728882 GCGGCTTGTAATTCTTCTCATGTG 60.729 45.833 0.00 0.00 0.00 3.21
178 183 6.560711 CCTAAATAAACTGCGGCTTGTAATT 58.439 36.000 0.00 2.30 0.00 1.40
253 258 9.594936 AGAACTTCATATATTGGTAGCTCTAGT 57.405 33.333 0.00 0.00 0.00 2.57
296 301 8.773645 CCACATATCAAATAAGATAACGCTTCA 58.226 33.333 0.00 0.00 34.42 3.02
297 302 8.230486 CCCACATATCAAATAAGATAACGCTTC 58.770 37.037 0.00 0.00 34.42 3.86
298 303 7.719633 ACCCACATATCAAATAAGATAACGCTT 59.280 33.333 0.00 0.00 34.42 4.68
299 304 7.224297 ACCCACATATCAAATAAGATAACGCT 58.776 34.615 0.00 0.00 34.42 5.07
300 305 7.435068 ACCCACATATCAAATAAGATAACGC 57.565 36.000 0.00 0.00 34.42 4.84
333 338 6.458615 GCTGCTTGAATTTGTTGTGGATTTTT 60.459 34.615 0.00 0.00 0.00 1.94
334 339 5.007921 GCTGCTTGAATTTGTTGTGGATTTT 59.992 36.000 0.00 0.00 0.00 1.82
335 340 4.512571 GCTGCTTGAATTTGTTGTGGATTT 59.487 37.500 0.00 0.00 0.00 2.17
337 342 3.656559 GCTGCTTGAATTTGTTGTGGAT 58.343 40.909 0.00 0.00 0.00 3.41
338 343 2.543445 CGCTGCTTGAATTTGTTGTGGA 60.543 45.455 0.00 0.00 0.00 4.02
340 345 1.788308 CCGCTGCTTGAATTTGTTGTG 59.212 47.619 0.00 0.00 0.00 3.33
341 346 1.269726 CCCGCTGCTTGAATTTGTTGT 60.270 47.619 0.00 0.00 0.00 3.32
342 347 1.421382 CCCGCTGCTTGAATTTGTTG 58.579 50.000 0.00 0.00 0.00 3.33
343 348 0.319813 GCCCGCTGCTTGAATTTGTT 60.320 50.000 0.00 0.00 36.87 2.83
344 349 1.290009 GCCCGCTGCTTGAATTTGT 59.710 52.632 0.00 0.00 36.87 2.83
347 352 2.672996 ACGCCCGCTGCTTGAATT 60.673 55.556 0.00 0.00 38.05 2.17
348 353 3.127533 GACGCCCGCTGCTTGAAT 61.128 61.111 0.00 0.00 38.05 2.57
349 354 3.899981 ATGACGCCCGCTGCTTGAA 62.900 57.895 0.00 0.00 38.05 2.69
350 355 3.899981 AATGACGCCCGCTGCTTGA 62.900 57.895 0.00 0.00 38.05 3.02
351 356 1.643868 TAAATGACGCCCGCTGCTTG 61.644 55.000 0.00 0.00 38.05 4.01
352 357 1.369091 CTAAATGACGCCCGCTGCTT 61.369 55.000 0.00 0.00 38.05 3.91
353 358 1.815421 CTAAATGACGCCCGCTGCT 60.815 57.895 0.00 0.00 38.05 4.24
354 359 1.644786 AACTAAATGACGCCCGCTGC 61.645 55.000 0.00 0.00 0.00 5.25
355 360 1.593006 CTAACTAAATGACGCCCGCTG 59.407 52.381 0.00 0.00 0.00 5.18
356 361 1.472728 CCTAACTAAATGACGCCCGCT 60.473 52.381 0.00 0.00 0.00 5.52
357 362 0.935196 CCTAACTAAATGACGCCCGC 59.065 55.000 0.00 0.00 0.00 6.13
360 365 2.093341 TGGACCCTAACTAAATGACGCC 60.093 50.000 0.00 0.00 0.00 5.68
361 366 3.255969 TGGACCCTAACTAAATGACGC 57.744 47.619 0.00 0.00 0.00 5.19
363 368 7.696992 TCAATTTGGACCCTAACTAAATGAC 57.303 36.000 0.00 0.00 31.04 3.06
364 369 8.581578 GTTTCAATTTGGACCCTAACTAAATGA 58.418 33.333 0.00 0.00 31.04 2.57
365 370 7.817478 GGTTTCAATTTGGACCCTAACTAAATG 59.183 37.037 10.14 0.00 31.04 2.32
367 372 7.070629 AGGTTTCAATTTGGACCCTAACTAAA 58.929 34.615 15.04 0.00 32.53 1.85
368 373 6.616577 AGGTTTCAATTTGGACCCTAACTAA 58.383 36.000 15.04 0.00 32.53 2.24
369 374 6.208840 AGGTTTCAATTTGGACCCTAACTA 57.791 37.500 15.04 0.00 32.53 2.24
371 376 5.303333 TCAAGGTTTCAATTTGGACCCTAAC 59.697 40.000 15.04 0.00 32.53 2.34
372 377 5.303333 GTCAAGGTTTCAATTTGGACCCTAA 59.697 40.000 15.04 0.00 32.53 2.69
373 378 4.830600 GTCAAGGTTTCAATTTGGACCCTA 59.169 41.667 15.04 3.74 32.53 3.53
374 379 3.641436 GTCAAGGTTTCAATTTGGACCCT 59.359 43.478 15.04 4.01 32.53 4.34
375 380 3.641436 AGTCAAGGTTTCAATTTGGACCC 59.359 43.478 15.04 1.85 32.53 4.46
376 381 4.584743 AGAGTCAAGGTTTCAATTTGGACC 59.415 41.667 12.28 12.28 0.00 4.46
378 383 5.768164 GGTAGAGTCAAGGTTTCAATTTGGA 59.232 40.000 0.00 0.00 0.00 3.53
379 384 5.048013 GGGTAGAGTCAAGGTTTCAATTTGG 60.048 44.000 0.00 0.00 0.00 3.28
380 385 5.770162 AGGGTAGAGTCAAGGTTTCAATTTG 59.230 40.000 0.00 0.00 0.00 2.32
382 387 5.584551 AGGGTAGAGTCAAGGTTTCAATT 57.415 39.130 0.00 0.00 0.00 2.32
384 389 5.382664 AAAGGGTAGAGTCAAGGTTTCAA 57.617 39.130 0.00 0.00 0.00 2.69
385 390 5.132144 AGAAAAGGGTAGAGTCAAGGTTTCA 59.868 40.000 0.00 0.00 0.00 2.69
387 392 5.648330 AGAAAAGGGTAGAGTCAAGGTTT 57.352 39.130 0.00 0.00 0.00 3.27
388 393 5.648330 AAGAAAAGGGTAGAGTCAAGGTT 57.352 39.130 0.00 0.00 0.00 3.50
389 394 5.648330 AAAGAAAAGGGTAGAGTCAAGGT 57.352 39.130 0.00 0.00 0.00 3.50
390 395 6.174049 CCTAAAGAAAAGGGTAGAGTCAAGG 58.826 44.000 0.00 0.00 0.00 3.61
403 408 6.773200 AGAGTCAAGGTTTCCCTAAAGAAAAG 59.227 38.462 0.00 0.00 41.56 2.27
404 409 6.669631 AGAGTCAAGGTTTCCCTAAAGAAAA 58.330 36.000 0.00 0.00 41.56 2.29
405 410 6.262056 AGAGTCAAGGTTTCCCTAAAGAAA 57.738 37.500 0.00 0.00 41.56 2.52
406 411 5.906772 AGAGTCAAGGTTTCCCTAAAGAA 57.093 39.130 0.00 0.00 41.56 2.52
407 412 5.247792 GGTAGAGTCAAGGTTTCCCTAAAGA 59.752 44.000 0.00 0.00 41.56 2.52
408 413 5.489249 GGTAGAGTCAAGGTTTCCCTAAAG 58.511 45.833 0.00 0.00 41.56 1.85
409 414 4.287845 GGGTAGAGTCAAGGTTTCCCTAAA 59.712 45.833 0.00 0.00 41.56 1.85
410 415 3.842436 GGGTAGAGTCAAGGTTTCCCTAA 59.158 47.826 0.00 0.00 41.56 2.69
412 417 2.157989 AGGGTAGAGTCAAGGTTTCCCT 60.158 50.000 0.00 0.00 45.63 4.20
413 418 2.027100 CAGGGTAGAGTCAAGGTTTCCC 60.027 54.545 0.00 0.00 0.00 3.97
414 419 2.904434 TCAGGGTAGAGTCAAGGTTTCC 59.096 50.000 0.00 0.00 0.00 3.13
415 420 3.579151 AGTCAGGGTAGAGTCAAGGTTTC 59.421 47.826 0.00 0.00 0.00 2.78
416 421 3.588569 AGTCAGGGTAGAGTCAAGGTTT 58.411 45.455 0.00 0.00 0.00 3.27
418 423 4.611564 ATAGTCAGGGTAGAGTCAAGGT 57.388 45.455 0.00 0.00 0.00 3.50
419 424 4.828387 GGTATAGTCAGGGTAGAGTCAAGG 59.172 50.000 0.00 0.00 0.00 3.61
420 425 4.828387 GGGTATAGTCAGGGTAGAGTCAAG 59.172 50.000 0.00 0.00 0.00 3.02
421 426 4.231195 TGGGTATAGTCAGGGTAGAGTCAA 59.769 45.833 0.00 0.00 0.00 3.18
422 427 3.789840 TGGGTATAGTCAGGGTAGAGTCA 59.210 47.826 0.00 0.00 0.00 3.41
423 428 4.450305 TGGGTATAGTCAGGGTAGAGTC 57.550 50.000 0.00 0.00 0.00 3.36
424 429 6.738205 ATATGGGTATAGTCAGGGTAGAGT 57.262 41.667 0.00 0.00 0.00 3.24
425 430 6.608002 GGAATATGGGTATAGTCAGGGTAGAG 59.392 46.154 0.00 0.00 35.99 2.43
428 433 6.235765 TGGAATATGGGTATAGTCAGGGTA 57.764 41.667 0.00 0.00 35.99 3.69
429 434 5.101254 TGGAATATGGGTATAGTCAGGGT 57.899 43.478 0.00 0.00 35.99 4.34
430 435 5.131142 GGATGGAATATGGGTATAGTCAGGG 59.869 48.000 0.00 0.00 35.99 4.45
433 438 5.964477 GGAGGATGGAATATGGGTATAGTCA 59.036 44.000 0.00 0.00 35.99 3.41
434 439 5.964477 TGGAGGATGGAATATGGGTATAGTC 59.036 44.000 0.00 0.00 34.09 2.59
435 440 5.927465 TGGAGGATGGAATATGGGTATAGT 58.073 41.667 0.00 0.00 0.00 2.12
436 441 5.367937 CCTGGAGGATGGAATATGGGTATAG 59.632 48.000 0.00 0.00 37.39 1.31
437 442 5.018413 TCCTGGAGGATGGAATATGGGTATA 59.982 44.000 0.00 0.00 39.78 1.47
438 443 4.114597 CCTGGAGGATGGAATATGGGTAT 58.885 47.826 0.00 0.00 37.39 2.73
439 444 3.145861 TCCTGGAGGATGGAATATGGGTA 59.854 47.826 0.00 0.00 39.78 3.69
440 445 2.089408 TCCTGGAGGATGGAATATGGGT 60.089 50.000 0.00 0.00 39.78 4.51
441 446 2.575279 CTCCTGGAGGATGGAATATGGG 59.425 54.545 16.19 0.00 44.46 4.00
442 447 3.524826 TCTCCTGGAGGATGGAATATGG 58.475 50.000 23.00 0.00 44.46 2.74
444 449 5.913534 TCTTTTCTCCTGGAGGATGGAATAT 59.086 40.000 23.00 0.00 44.46 1.28
445 450 5.288687 TCTTTTCTCCTGGAGGATGGAATA 58.711 41.667 23.00 4.99 44.46 1.75
446 451 4.114597 TCTTTTCTCCTGGAGGATGGAAT 58.885 43.478 23.00 0.00 44.46 3.01
447 452 3.531059 TCTTTTCTCCTGGAGGATGGAA 58.469 45.455 23.00 7.50 44.46 3.53
448 453 3.205519 TCTTTTCTCCTGGAGGATGGA 57.794 47.619 23.00 12.60 44.46 3.41
449 454 3.265479 ACTTCTTTTCTCCTGGAGGATGG 59.735 47.826 23.00 10.55 44.46 3.51
450 455 4.566426 ACTTCTTTTCTCCTGGAGGATG 57.434 45.455 23.00 15.40 44.46 3.51
451 456 6.704056 TTTACTTCTTTTCTCCTGGAGGAT 57.296 37.500 23.00 1.25 44.46 3.24
452 457 6.509523 TTTTACTTCTTTTCTCCTGGAGGA 57.490 37.500 23.00 12.78 43.08 3.71
454 459 9.684448 GAAATTTTTACTTCTTTTCTCCTGGAG 57.316 33.333 17.84 17.84 0.00 3.86
455 460 9.421399 AGAAATTTTTACTTCTTTTCTCCTGGA 57.579 29.630 0.00 0.00 32.66 3.86
457 462 9.387123 CGAGAAATTTTTACTTCTTTTCTCCTG 57.613 33.333 14.61 2.73 44.67 3.86
458 463 9.338622 TCGAGAAATTTTTACTTCTTTTCTCCT 57.661 29.630 14.61 0.00 44.67 3.69
459 464 9.946165 TTCGAGAAATTTTTACTTCTTTTCTCC 57.054 29.630 14.61 2.51 44.67 3.71
487 492 9.603921 CCTTTTGCATTCATGGTAAATTTAGAT 57.396 29.630 0.00 0.00 0.00 1.98
489 494 9.603921 ATCCTTTTGCATTCATGGTAAATTTAG 57.396 29.630 0.00 0.00 0.00 1.85
492 497 8.980596 TCTATCCTTTTGCATTCATGGTAAATT 58.019 29.630 0.00 0.00 0.00 1.82
494 499 7.953005 TCTATCCTTTTGCATTCATGGTAAA 57.047 32.000 0.00 0.00 0.00 2.01
495 500 9.288576 CTATCTATCCTTTTGCATTCATGGTAA 57.711 33.333 0.00 0.00 0.00 2.85
496 501 7.884877 CCTATCTATCCTTTTGCATTCATGGTA 59.115 37.037 0.00 0.00 0.00 3.25
498 503 6.718454 ACCTATCTATCCTTTTGCATTCATGG 59.282 38.462 0.00 0.00 0.00 3.66
499 504 7.230108 ACACCTATCTATCCTTTTGCATTCATG 59.770 37.037 0.00 0.00 0.00 3.07
500 505 7.230108 CACACCTATCTATCCTTTTGCATTCAT 59.770 37.037 0.00 0.00 0.00 2.57
502 507 6.514048 GCACACCTATCTATCCTTTTGCATTC 60.514 42.308 0.00 0.00 0.00 2.67
503 508 5.300286 GCACACCTATCTATCCTTTTGCATT 59.700 40.000 0.00 0.00 0.00 3.56
505 510 4.199310 GCACACCTATCTATCCTTTTGCA 58.801 43.478 0.00 0.00 0.00 4.08
507 512 5.278169 GCATGCACACCTATCTATCCTTTTG 60.278 44.000 14.21 0.00 0.00 2.44
509 514 4.103785 AGCATGCACACCTATCTATCCTTT 59.896 41.667 21.98 0.00 0.00 3.11
511 516 3.007723 CAGCATGCACACCTATCTATCCT 59.992 47.826 21.98 0.00 0.00 3.24
512 517 3.332919 CAGCATGCACACCTATCTATCC 58.667 50.000 21.98 0.00 0.00 2.59
513 518 3.332919 CCAGCATGCACACCTATCTATC 58.667 50.000 21.98 0.00 31.97 2.08
514 519 2.039480 CCCAGCATGCACACCTATCTAT 59.961 50.000 21.98 0.00 31.97 1.98
515 520 1.417517 CCCAGCATGCACACCTATCTA 59.582 52.381 21.98 0.00 31.97 1.98
517 522 0.107017 ACCCAGCATGCACACCTATC 60.107 55.000 21.98 0.00 31.97 2.08
519 524 1.299648 GACCCAGCATGCACACCTA 59.700 57.895 21.98 0.00 31.97 3.08
521 526 3.064324 GGACCCAGCATGCACACC 61.064 66.667 21.98 11.59 31.97 4.16
522 527 3.064324 GGGACCCAGCATGCACAC 61.064 66.667 21.98 6.17 31.97 3.82
524 529 1.470996 TTTTGGGACCCAGCATGCAC 61.471 55.000 21.98 5.45 33.81 4.57
525 530 1.152376 TTTTGGGACCCAGCATGCA 60.152 52.632 21.98 0.00 33.81 3.96
526 531 1.293179 GTTTTGGGACCCAGCATGC 59.707 57.895 14.35 10.51 33.81 4.06
527 532 0.893270 TCGTTTTGGGACCCAGCATG 60.893 55.000 14.35 9.89 33.81 4.06
528 533 0.609131 CTCGTTTTGGGACCCAGCAT 60.609 55.000 14.35 0.00 33.81 3.79
529 534 1.228124 CTCGTTTTGGGACCCAGCA 60.228 57.895 14.35 1.33 33.81 4.41
530 535 1.971695 CCTCGTTTTGGGACCCAGC 60.972 63.158 14.35 7.48 33.81 4.85
532 537 2.114411 GCCTCGTTTTGGGACCCA 59.886 61.111 9.95 9.95 0.00 4.51
534 539 3.733960 GCGCCTCGTTTTGGGACC 61.734 66.667 0.00 0.00 0.00 4.46
535 540 2.183858 GAAGCGCCTCGTTTTGGGAC 62.184 60.000 2.29 0.00 29.28 4.46
536 541 1.964373 GAAGCGCCTCGTTTTGGGA 60.964 57.895 2.29 0.00 29.28 4.37
537 542 2.561373 GAAGCGCCTCGTTTTGGG 59.439 61.111 2.29 0.00 29.28 4.12
538 543 2.561373 GGAAGCGCCTCGTTTTGG 59.439 61.111 2.29 0.00 29.28 3.28
539 544 2.258013 TGGGAAGCGCCTCGTTTTG 61.258 57.895 2.29 0.00 36.66 2.44
540 545 2.112297 TGGGAAGCGCCTCGTTTT 59.888 55.556 2.29 0.00 36.66 2.43
545 550 3.766691 TACCGTGGGAAGCGCCTC 61.767 66.667 2.29 0.00 36.66 4.70
546 551 4.078516 GTACCGTGGGAAGCGCCT 62.079 66.667 2.29 0.00 36.66 5.52
549 554 1.445582 GTCTGTACCGTGGGAAGCG 60.446 63.158 0.00 0.00 0.00 4.68
550 555 1.079336 GGTCTGTACCGTGGGAAGC 60.079 63.158 0.00 0.00 35.62 3.86
559 564 0.035739 TTTTGGCTCGGGTCTGTACC 59.964 55.000 0.00 0.00 45.97 3.34
560 565 1.439679 CTTTTGGCTCGGGTCTGTAC 58.560 55.000 0.00 0.00 0.00 2.90
561 566 0.321298 GCTTTTGGCTCGGGTCTGTA 60.321 55.000 0.00 0.00 38.06 2.74
563 568 1.580845 CTGCTTTTGGCTCGGGTCTG 61.581 60.000 0.00 0.00 42.39 3.51
564 569 1.302832 CTGCTTTTGGCTCGGGTCT 60.303 57.895 0.00 0.00 42.39 3.85
565 570 1.302511 TCTGCTTTTGGCTCGGGTC 60.303 57.895 0.00 0.00 42.39 4.46
566 571 1.600916 GTCTGCTTTTGGCTCGGGT 60.601 57.895 0.00 0.00 42.39 5.28
567 572 1.580845 CTGTCTGCTTTTGGCTCGGG 61.581 60.000 0.00 0.00 42.39 5.14
568 573 1.871772 CTGTCTGCTTTTGGCTCGG 59.128 57.895 0.00 0.00 42.39 4.63
569 574 1.208614 GCTGTCTGCTTTTGGCTCG 59.791 57.895 0.00 0.00 42.39 5.03
570 575 1.208614 CGCTGTCTGCTTTTGGCTC 59.791 57.895 0.00 0.00 42.39 4.70
572 577 1.370900 CACGCTGTCTGCTTTTGGC 60.371 57.895 0.00 0.00 40.11 4.52
573 578 0.381801 AACACGCTGTCTGCTTTTGG 59.618 50.000 0.00 0.00 40.11 3.28
574 579 1.847999 CAAACACGCTGTCTGCTTTTG 59.152 47.619 0.00 3.76 40.11 2.44
575 580 1.202290 CCAAACACGCTGTCTGCTTTT 60.202 47.619 0.00 0.00 40.11 2.27
576 581 0.381801 CCAAACACGCTGTCTGCTTT 59.618 50.000 0.00 0.00 40.11 3.51
577 582 0.748005 ACCAAACACGCTGTCTGCTT 60.748 50.000 0.00 0.00 40.11 3.91
578 583 0.748005 AACCAAACACGCTGTCTGCT 60.748 50.000 0.00 0.00 40.11 4.24
579 584 0.317020 GAACCAAACACGCTGTCTGC 60.317 55.000 0.00 0.00 38.57 4.26
580 585 0.042188 CGAACCAAACACGCTGTCTG 60.042 55.000 0.00 0.00 0.00 3.51
581 586 1.157870 CCGAACCAAACACGCTGTCT 61.158 55.000 0.00 0.00 0.00 3.41
583 588 2.184167 CCCGAACCAAACACGCTGT 61.184 57.895 0.00 0.00 0.00 4.40
585 590 1.597027 CTCCCGAACCAAACACGCT 60.597 57.895 0.00 0.00 0.00 5.07
586 591 1.161563 TTCTCCCGAACCAAACACGC 61.162 55.000 0.00 0.00 0.00 5.34
587 592 1.519408 ATTCTCCCGAACCAAACACG 58.481 50.000 0.00 0.00 30.67 4.49
588 593 2.095919 CGAATTCTCCCGAACCAAACAC 60.096 50.000 3.52 0.00 30.67 3.32
589 594 2.147958 CGAATTCTCCCGAACCAAACA 58.852 47.619 3.52 0.00 30.67 2.83
590 595 2.415512 CTCGAATTCTCCCGAACCAAAC 59.584 50.000 3.52 0.00 34.17 2.93
591 596 2.300723 TCTCGAATTCTCCCGAACCAAA 59.699 45.455 3.52 0.00 34.17 3.28
593 598 1.552578 TCTCGAATTCTCCCGAACCA 58.447 50.000 3.52 0.00 34.17 3.67
594 599 2.892784 ATCTCGAATTCTCCCGAACC 57.107 50.000 3.52 0.00 34.17 3.62
595 600 3.305471 CCCTATCTCGAATTCTCCCGAAC 60.305 52.174 3.52 0.00 34.17 3.95
596 601 2.891580 CCCTATCTCGAATTCTCCCGAA 59.108 50.000 3.52 0.00 34.17 4.30
598 603 2.515854 TCCCTATCTCGAATTCTCCCG 58.484 52.381 3.52 0.00 0.00 5.14
599 604 4.323104 CCATTCCCTATCTCGAATTCTCCC 60.323 50.000 3.52 0.00 0.00 4.30
602 607 4.493618 TCCCATTCCCTATCTCGAATTCT 58.506 43.478 3.52 0.00 0.00 2.40
604 609 4.235372 ACTCCCATTCCCTATCTCGAATT 58.765 43.478 0.00 0.00 0.00 2.17
605 610 3.863086 ACTCCCATTCCCTATCTCGAAT 58.137 45.455 0.00 0.00 0.00 3.34
606 611 3.330126 ACTCCCATTCCCTATCTCGAA 57.670 47.619 0.00 0.00 0.00 3.71
608 613 2.965831 TCAACTCCCATTCCCTATCTCG 59.034 50.000 0.00 0.00 0.00 4.04
609 614 3.326297 CCTCAACTCCCATTCCCTATCTC 59.674 52.174 0.00 0.00 0.00 2.75
610 615 3.321950 CCTCAACTCCCATTCCCTATCT 58.678 50.000 0.00 0.00 0.00 1.98
611 616 2.373502 CCCTCAACTCCCATTCCCTATC 59.626 54.545 0.00 0.00 0.00 2.08
613 618 1.628043 CCCCTCAACTCCCATTCCCTA 60.628 57.143 0.00 0.00 0.00 3.53
614 619 0.921256 CCCCTCAACTCCCATTCCCT 60.921 60.000 0.00 0.00 0.00 4.20
615 620 1.214992 ACCCCTCAACTCCCATTCCC 61.215 60.000 0.00 0.00 0.00 3.97
616 621 0.034089 CACCCCTCAACTCCCATTCC 60.034 60.000 0.00 0.00 0.00 3.01
618 623 0.995024 CTCACCCCTCAACTCCCATT 59.005 55.000 0.00 0.00 0.00 3.16
619 624 0.916358 CCTCACCCCTCAACTCCCAT 60.916 60.000 0.00 0.00 0.00 4.00
620 625 1.538876 CCTCACCCCTCAACTCCCA 60.539 63.158 0.00 0.00 0.00 4.37
621 626 1.229529 TCCTCACCCCTCAACTCCC 60.230 63.158 0.00 0.00 0.00 4.30
622 627 0.252284 TCTCCTCACCCCTCAACTCC 60.252 60.000 0.00 0.00 0.00 3.85
623 628 1.872773 ATCTCCTCACCCCTCAACTC 58.127 55.000 0.00 0.00 0.00 3.01
625 630 4.569719 TTTAATCTCCTCACCCCTCAAC 57.430 45.455 0.00 0.00 0.00 3.18
626 631 4.601857 ACTTTTAATCTCCTCACCCCTCAA 59.398 41.667 0.00 0.00 0.00 3.02
627 632 4.175962 ACTTTTAATCTCCTCACCCCTCA 58.824 43.478 0.00 0.00 0.00 3.86
630 635 4.700692 GTGAACTTTTAATCTCCTCACCCC 59.299 45.833 0.00 0.00 0.00 4.95
631 636 5.412904 CAGTGAACTTTTAATCTCCTCACCC 59.587 44.000 0.00 0.00 33.75 4.61
632 637 5.998363 ACAGTGAACTTTTAATCTCCTCACC 59.002 40.000 0.00 0.00 33.75 4.02
633 638 7.497925 AACAGTGAACTTTTAATCTCCTCAC 57.502 36.000 0.00 0.00 33.51 3.51
634 639 7.773224 TCAAACAGTGAACTTTTAATCTCCTCA 59.227 33.333 0.00 0.00 31.51 3.86
635 640 8.154649 TCAAACAGTGAACTTTTAATCTCCTC 57.845 34.615 0.00 0.00 31.51 3.71
636 641 8.697507 ATCAAACAGTGAACTTTTAATCTCCT 57.302 30.769 0.00 0.00 40.50 3.69
642 647 8.846211 CCCTCTAATCAAACAGTGAACTTTTAA 58.154 33.333 0.00 0.00 40.50 1.52
643 648 8.215050 TCCCTCTAATCAAACAGTGAACTTTTA 58.785 33.333 0.00 0.00 40.50 1.52
644 649 7.060421 TCCCTCTAATCAAACAGTGAACTTTT 58.940 34.615 0.00 0.00 40.50 2.27
645 650 6.601332 TCCCTCTAATCAAACAGTGAACTTT 58.399 36.000 0.00 0.00 40.50 2.66
646 651 6.187727 TCCCTCTAATCAAACAGTGAACTT 57.812 37.500 0.00 0.00 40.50 2.66
647 652 5.825593 TCCCTCTAATCAAACAGTGAACT 57.174 39.130 0.00 0.00 40.50 3.01
648 653 6.127897 CCATTCCCTCTAATCAAACAGTGAAC 60.128 42.308 0.00 0.00 40.50 3.18
649 654 5.945784 CCATTCCCTCTAATCAAACAGTGAA 59.054 40.000 0.00 0.00 40.50 3.18
650 655 5.500234 CCATTCCCTCTAATCAAACAGTGA 58.500 41.667 0.00 0.00 41.67 3.41
651 656 4.641989 CCCATTCCCTCTAATCAAACAGTG 59.358 45.833 0.00 0.00 0.00 3.66
652 657 4.540099 TCCCATTCCCTCTAATCAAACAGT 59.460 41.667 0.00 0.00 0.00 3.55
653 658 5.116084 TCCCATTCCCTCTAATCAAACAG 57.884 43.478 0.00 0.00 0.00 3.16
654 659 4.540099 ACTCCCATTCCCTCTAATCAAACA 59.460 41.667 0.00 0.00 0.00 2.83
656 661 5.796502 AACTCCCATTCCCTCTAATCAAA 57.203 39.130 0.00 0.00 0.00 2.69
658 663 5.369699 CCTAAACTCCCATTCCCTCTAATCA 59.630 44.000 0.00 0.00 0.00 2.57
661 666 4.967871 TCCTAAACTCCCATTCCCTCTAA 58.032 43.478 0.00 0.00 0.00 2.10
662 667 4.637288 TCCTAAACTCCCATTCCCTCTA 57.363 45.455 0.00 0.00 0.00 2.43
666 671 2.091830 CCCTTCCTAAACTCCCATTCCC 60.092 54.545 0.00 0.00 0.00 3.97
668 673 2.850568 TCCCCTTCCTAAACTCCCATTC 59.149 50.000 0.00 0.00 0.00 2.67
669 674 2.942905 TCCCCTTCCTAAACTCCCATT 58.057 47.619 0.00 0.00 0.00 3.16
670 675 2.680439 TCCCCTTCCTAAACTCCCAT 57.320 50.000 0.00 0.00 0.00 4.00
671 676 2.444033 TTCCCCTTCCTAAACTCCCA 57.556 50.000 0.00 0.00 0.00 4.37
672 677 2.091830 CCATTCCCCTTCCTAAACTCCC 60.092 54.545 0.00 0.00 0.00 4.30
675 680 2.853077 CTCCCATTCCCCTTCCTAAACT 59.147 50.000 0.00 0.00 0.00 2.66
677 682 2.942905 ACTCCCATTCCCCTTCCTAAA 58.057 47.619 0.00 0.00 0.00 1.85
679 684 2.205342 CAACTCCCATTCCCCTTCCTA 58.795 52.381 0.00 0.00 0.00 2.94
680 685 1.002857 CAACTCCCATTCCCCTTCCT 58.997 55.000 0.00 0.00 0.00 3.36
681 686 0.999712 TCAACTCCCATTCCCCTTCC 59.000 55.000 0.00 0.00 0.00 3.46
683 688 1.002857 CCTCAACTCCCATTCCCCTT 58.997 55.000 0.00 0.00 0.00 3.95
684 689 0.121197 TCCTCAACTCCCATTCCCCT 59.879 55.000 0.00 0.00 0.00 4.79
685 690 0.999712 TTCCTCAACTCCCATTCCCC 59.000 55.000 0.00 0.00 0.00 4.81
687 692 1.683319 GGCTTCCTCAACTCCCATTCC 60.683 57.143 0.00 0.00 0.00 3.01
688 693 1.004745 TGGCTTCCTCAACTCCCATTC 59.995 52.381 0.00 0.00 0.00 2.67
691 696 1.075601 ATTGGCTTCCTCAACTCCCA 58.924 50.000 0.00 0.00 0.00 4.37
692 697 2.095461 GAATTGGCTTCCTCAACTCCC 58.905 52.381 0.00 0.00 0.00 4.30
703 708 4.337264 AGAAATAGGTGGGAATTGGCTT 57.663 40.909 0.00 0.00 0.00 4.35
704 709 4.281657 GAAGAAATAGGTGGGAATTGGCT 58.718 43.478 0.00 0.00 0.00 4.75
705 710 3.384789 GGAAGAAATAGGTGGGAATTGGC 59.615 47.826 0.00 0.00 0.00 4.52
706 711 3.960755 GGGAAGAAATAGGTGGGAATTGG 59.039 47.826 0.00 0.00 0.00 3.16
709 714 3.205282 CCTGGGAAGAAATAGGTGGGAAT 59.795 47.826 0.00 0.00 0.00 3.01
710 715 2.580783 CCTGGGAAGAAATAGGTGGGAA 59.419 50.000 0.00 0.00 0.00 3.97
712 717 1.215423 CCCTGGGAAGAAATAGGTGGG 59.785 57.143 7.01 0.00 0.00 4.61
713 718 1.215423 CCCCTGGGAAGAAATAGGTGG 59.785 57.143 16.20 0.00 37.50 4.61
714 719 1.923148 ACCCCTGGGAAGAAATAGGTG 59.077 52.381 16.20 0.00 38.96 4.00
715 720 2.378308 ACCCCTGGGAAGAAATAGGT 57.622 50.000 16.20 0.00 38.96 3.08
716 721 2.442126 GGTACCCCTGGGAAGAAATAGG 59.558 54.545 16.20 0.00 38.96 2.57
717 722 3.859061 GGTACCCCTGGGAAGAAATAG 57.141 52.381 16.20 0.00 38.96 1.73
734 739 3.512329 TCTGCTCACGAATTAACAGGGTA 59.488 43.478 0.00 0.00 0.00 3.69
736 741 2.932614 CTCTGCTCACGAATTAACAGGG 59.067 50.000 0.00 0.00 0.00 4.45
737 742 3.589988 ACTCTGCTCACGAATTAACAGG 58.410 45.455 0.00 0.00 0.00 4.00
739 744 7.148474 GGATAAAACTCTGCTCACGAATTAACA 60.148 37.037 0.00 0.00 0.00 2.41
742 747 5.815740 GGGATAAAACTCTGCTCACGAATTA 59.184 40.000 0.00 0.00 0.00 1.40
743 748 4.636206 GGGATAAAACTCTGCTCACGAATT 59.364 41.667 0.00 0.00 0.00 2.17
745 750 3.007506 TGGGATAAAACTCTGCTCACGAA 59.992 43.478 0.00 0.00 0.00 3.85
746 751 2.565391 TGGGATAAAACTCTGCTCACGA 59.435 45.455 0.00 0.00 0.00 4.35
749 754 2.935238 GCGTGGGATAAAACTCTGCTCA 60.935 50.000 0.00 0.00 0.00 4.26
750 755 1.666189 GCGTGGGATAAAACTCTGCTC 59.334 52.381 0.00 0.00 0.00 4.26
751 756 1.279271 AGCGTGGGATAAAACTCTGCT 59.721 47.619 0.00 0.00 0.00 4.24
752 757 1.739067 AGCGTGGGATAAAACTCTGC 58.261 50.000 0.00 0.00 0.00 4.26
753 758 6.292919 GCTAATTAGCGTGGGATAAAACTCTG 60.293 42.308 21.10 0.00 39.82 3.35
754 759 5.758784 GCTAATTAGCGTGGGATAAAACTCT 59.241 40.000 21.10 0.00 39.82 3.24
771 776 9.295825 CCCTTGTTTGGTATATGATGCTAATTA 57.704 33.333 0.00 0.00 0.00 1.40
772 777 8.004215 TCCCTTGTTTGGTATATGATGCTAATT 58.996 33.333 0.00 0.00 0.00 1.40
773 778 7.526041 TCCCTTGTTTGGTATATGATGCTAAT 58.474 34.615 0.00 0.00 0.00 1.73
774 779 6.905736 TCCCTTGTTTGGTATATGATGCTAA 58.094 36.000 0.00 0.00 0.00 3.09
775 780 6.508030 TCCCTTGTTTGGTATATGATGCTA 57.492 37.500 0.00 0.00 0.00 3.49
776 781 5.387113 TCCCTTGTTTGGTATATGATGCT 57.613 39.130 0.00 0.00 0.00 3.79
777 782 6.265196 TCATTCCCTTGTTTGGTATATGATGC 59.735 38.462 0.00 0.00 0.00 3.91
780 785 7.092444 ACTCTCATTCCCTTGTTTGGTATATGA 60.092 37.037 0.00 0.00 0.00 2.15
781 786 7.056635 ACTCTCATTCCCTTGTTTGGTATATG 58.943 38.462 0.00 0.00 0.00 1.78
782 787 7.213178 ACTCTCATTCCCTTGTTTGGTATAT 57.787 36.000 0.00 0.00 0.00 0.86
783 788 6.636454 ACTCTCATTCCCTTGTTTGGTATA 57.364 37.500 0.00 0.00 0.00 1.47
784 789 5.520748 ACTCTCATTCCCTTGTTTGGTAT 57.479 39.130 0.00 0.00 0.00 2.73
785 790 4.993705 ACTCTCATTCCCTTGTTTGGTA 57.006 40.909 0.00 0.00 0.00 3.25
786 791 3.884037 ACTCTCATTCCCTTGTTTGGT 57.116 42.857 0.00 0.00 0.00 3.67
787 792 6.648879 TTTTACTCTCATTCCCTTGTTTGG 57.351 37.500 0.00 0.00 0.00 3.28
788 793 8.579863 AGATTTTTACTCTCATTCCCTTGTTTG 58.420 33.333 0.00 0.00 0.00 2.93
789 794 8.712228 AGATTTTTACTCTCATTCCCTTGTTT 57.288 30.769 0.00 0.00 0.00 2.83
790 795 9.232473 GTAGATTTTTACTCTCATTCCCTTGTT 57.768 33.333 0.00 0.00 0.00 2.83
791 796 8.606830 AGTAGATTTTTACTCTCATTCCCTTGT 58.393 33.333 0.00 0.00 0.00 3.16
792 797 9.454859 AAGTAGATTTTTACTCTCATTCCCTTG 57.545 33.333 0.00 0.00 32.84 3.61
808 813 9.981460 AGGGATTAGTCATGAAAAGTAGATTTT 57.019 29.630 0.00 0.00 43.88 1.82
809 814 9.981460 AAGGGATTAGTCATGAAAAGTAGATTT 57.019 29.630 0.00 0.00 0.00 2.17
810 815 9.620259 GAAGGGATTAGTCATGAAAAGTAGATT 57.380 33.333 0.00 0.00 0.00 2.40
811 816 8.772250 TGAAGGGATTAGTCATGAAAAGTAGAT 58.228 33.333 0.00 0.00 0.00 1.98
812 817 8.146053 TGAAGGGATTAGTCATGAAAAGTAGA 57.854 34.615 0.00 0.00 0.00 2.59
813 818 8.970859 ATGAAGGGATTAGTCATGAAAAGTAG 57.029 34.615 0.00 0.00 0.00 2.57
815 820 9.753674 TTTATGAAGGGATTAGTCATGAAAAGT 57.246 29.630 0.00 0.00 0.00 2.66
817 822 9.527157 TGTTTATGAAGGGATTAGTCATGAAAA 57.473 29.630 0.00 0.00 0.00 2.29
819 824 7.556275 GGTGTTTATGAAGGGATTAGTCATGAA 59.444 37.037 0.00 0.00 0.00 2.57
820 825 7.054124 GGTGTTTATGAAGGGATTAGTCATGA 58.946 38.462 0.00 0.00 0.00 3.07
821 826 6.263168 GGGTGTTTATGAAGGGATTAGTCATG 59.737 42.308 0.00 0.00 0.00 3.07
822 827 6.160459 AGGGTGTTTATGAAGGGATTAGTCAT 59.840 38.462 0.00 0.00 0.00 3.06
823 828 5.491078 AGGGTGTTTATGAAGGGATTAGTCA 59.509 40.000 0.00 0.00 0.00 3.41
824 829 6.002653 AGGGTGTTTATGAAGGGATTAGTC 57.997 41.667 0.00 0.00 0.00 2.59
825 830 6.402981 AAGGGTGTTTATGAAGGGATTAGT 57.597 37.500 0.00 0.00 0.00 2.24
826 831 7.040409 GCATAAGGGTGTTTATGAAGGGATTAG 60.040 40.741 9.31 0.00 41.44 1.73
827 832 6.775629 GCATAAGGGTGTTTATGAAGGGATTA 59.224 38.462 9.31 0.00 41.44 1.75
828 833 5.598417 GCATAAGGGTGTTTATGAAGGGATT 59.402 40.000 9.31 0.00 41.44 3.01
829 834 5.140454 GCATAAGGGTGTTTATGAAGGGAT 58.860 41.667 9.31 0.00 41.44 3.85
830 835 4.017958 TGCATAAGGGTGTTTATGAAGGGA 60.018 41.667 9.31 0.00 41.44 4.20
831 836 4.277476 TGCATAAGGGTGTTTATGAAGGG 58.723 43.478 9.31 0.00 41.44 3.95
832 837 5.913137 TTGCATAAGGGTGTTTATGAAGG 57.087 39.130 9.31 0.00 41.44 3.46
833 838 6.924111 AGTTTGCATAAGGGTGTTTATGAAG 58.076 36.000 9.31 0.00 41.44 3.02
834 839 6.909550 AGTTTGCATAAGGGTGTTTATGAA 57.090 33.333 9.31 0.00 41.44 2.57
835 840 6.071616 GGAAGTTTGCATAAGGGTGTTTATGA 60.072 38.462 9.31 0.00 41.44 2.15
836 841 6.099341 GGAAGTTTGCATAAGGGTGTTTATG 58.901 40.000 0.00 2.26 41.70 1.90
838 843 5.141182 TGGAAGTTTGCATAAGGGTGTTTA 58.859 37.500 0.00 0.00 0.00 2.01
839 844 3.964031 TGGAAGTTTGCATAAGGGTGTTT 59.036 39.130 0.00 0.00 0.00 2.83
842 847 4.381932 GGAATGGAAGTTTGCATAAGGGTG 60.382 45.833 0.00 0.00 38.33 4.61
843 848 3.769300 GGAATGGAAGTTTGCATAAGGGT 59.231 43.478 0.00 0.00 38.33 4.34
844 849 3.132824 GGGAATGGAAGTTTGCATAAGGG 59.867 47.826 0.00 0.00 38.33 3.95
846 851 4.026052 AGGGGAATGGAAGTTTGCATAAG 58.974 43.478 0.00 0.00 38.33 1.73
847 852 3.768757 CAGGGGAATGGAAGTTTGCATAA 59.231 43.478 0.00 0.00 38.33 1.90
848 853 3.364549 CAGGGGAATGGAAGTTTGCATA 58.635 45.455 0.00 0.00 38.33 3.14
849 854 2.181975 CAGGGGAATGGAAGTTTGCAT 58.818 47.619 0.00 0.00 41.21 3.96
850 855 1.631405 CAGGGGAATGGAAGTTTGCA 58.369 50.000 0.00 0.00 0.00 4.08
853 858 0.786435 AGGCAGGGGAATGGAAGTTT 59.214 50.000 0.00 0.00 0.00 2.66
854 859 0.040204 CAGGCAGGGGAATGGAAGTT 59.960 55.000 0.00 0.00 0.00 2.66
859 864 3.605412 TTGGCAGGCAGGGGAATGG 62.605 63.158 0.00 0.00 0.00 3.16
861 866 1.610379 GTTTGGCAGGCAGGGGAAT 60.610 57.895 0.00 0.00 0.00 3.01
862 867 2.203625 GTTTGGCAGGCAGGGGAA 60.204 61.111 0.00 0.00 0.00 3.97
863 868 3.506743 TGTTTGGCAGGCAGGGGA 61.507 61.111 0.00 0.00 0.00 4.81
864 869 2.993264 CTGTTTGGCAGGCAGGGG 60.993 66.667 11.12 0.00 41.42 4.79
874 879 0.109342 ACCACTCTCAGCCTGTTTGG 59.891 55.000 0.00 0.00 39.35 3.28
875 880 2.300152 TCTACCACTCTCAGCCTGTTTG 59.700 50.000 0.00 0.00 0.00 2.93
876 881 2.609747 TCTACCACTCTCAGCCTGTTT 58.390 47.619 0.00 0.00 0.00 2.83
877 882 2.310779 TCTACCACTCTCAGCCTGTT 57.689 50.000 0.00 0.00 0.00 3.16
879 884 2.828520 TCTTTCTACCACTCTCAGCCTG 59.171 50.000 0.00 0.00 0.00 4.85
880 885 3.096092 CTCTTTCTACCACTCTCAGCCT 58.904 50.000 0.00 0.00 0.00 4.58
881 886 3.093057 TCTCTTTCTACCACTCTCAGCC 58.907 50.000 0.00 0.00 0.00 4.85
906 4887 0.971447 GAGTCCTAGTGCCGAGGGTT 60.971 60.000 2.44 0.00 34.56 4.11
920 4901 1.830477 AGGAGAAGCAGATGTGAGTCC 59.170 52.381 0.00 0.00 0.00 3.85
1200 6315 4.168291 CGGGGAGAAGGCTGAGGC 62.168 72.222 0.00 0.00 37.82 4.70
1239 6354 3.703052 GGGAATCGGGAGTAGAACACTTA 59.297 47.826 0.00 0.00 37.72 2.24
1289 6404 6.553953 AACCACACCAGTAAAATTCCTTTT 57.446 33.333 0.00 0.00 38.17 2.27
1316 6432 1.346068 GTGGATCCATCCCTAGAGCAC 59.654 57.143 19.62 0.00 46.59 4.40
1317 6433 1.722034 GTGGATCCATCCCTAGAGCA 58.278 55.000 19.62 0.00 46.59 4.26
1400 6516 1.301677 CGCCTCTCTTTTCACCTGCC 61.302 60.000 0.00 0.00 0.00 4.85
1555 6713 2.126189 GAGTGTGTCGGGTACGGC 60.126 66.667 0.00 0.00 46.87 5.68
1570 6743 2.125912 CACGGCCTTCCAGTCGAG 60.126 66.667 0.00 0.00 0.00 4.04
1571 6744 4.373116 GCACGGCCTTCCAGTCGA 62.373 66.667 0.00 0.00 0.00 4.20
1586 6759 1.765314 GGCCCTCTAGAATCTTCTGCA 59.235 52.381 2.69 0.00 38.19 4.41
1641 6814 2.756283 AGGTCGGAGGGCTTCGAG 60.756 66.667 0.00 0.00 36.00 4.04
1759 6956 2.884367 CCATTGTTGCCGCCGAAT 59.116 55.556 0.00 0.00 0.00 3.34
1935 7132 1.360194 CGCTCTCCAGCTCTGCTTTG 61.360 60.000 0.00 0.00 44.40 2.77
1938 7135 4.146075 GCGCTCTCCAGCTCTGCT 62.146 66.667 0.00 0.00 44.40 4.24
2213 7460 0.101219 GGCCCAGCTAAATCTTTGCG 59.899 55.000 0.00 0.00 0.00 4.85
2283 7530 1.536149 GTCGAGTCGATTTCTCCACG 58.464 55.000 19.75 0.00 38.42 4.94
2307 7554 0.604578 AACCCATTGACTGCATGCAC 59.395 50.000 18.46 9.02 0.00 4.57
2318 7565 5.887598 TCTATCTGAACCATGAAACCCATTG 59.112 40.000 0.00 0.00 31.94 2.82
2341 7588 5.009010 ACATGAACAGTGAATGGTGAGTTTC 59.991 40.000 0.00 0.00 0.00 2.78
2358 7605 6.146184 CCGATCCAGTAATCACATACATGAAC 59.854 42.308 0.00 0.00 30.82 3.18
2366 7613 1.768275 TGGCCGATCCAGTAATCACAT 59.232 47.619 0.00 0.00 40.72 3.21
2443 7702 1.211457 ACAGCATTGGACCTGGATCTC 59.789 52.381 0.00 0.00 33.43 2.75
2464 7723 2.283298 CTAGAAGACCGCATGCAACAT 58.717 47.619 19.57 0.67 0.00 2.71
2510 7770 0.729116 GCACTCATGAACCATCCGTG 59.271 55.000 0.00 0.56 0.00 4.94
2514 7774 5.355071 TCATTGTTAGCACTCATGAACCATC 59.645 40.000 0.00 0.00 0.00 3.51
2607 7867 3.364565 GCTTGTTTTGGCATTGCTGAATG 60.365 43.478 8.82 0.00 41.82 2.67
2633 7893 2.421424 GACATCAGAGCATGGAAACCAC 59.579 50.000 0.00 0.00 35.80 4.16
2641 7901 2.167900 TGAGACCAGACATCAGAGCATG 59.832 50.000 0.00 0.00 0.00 4.06
2722 7983 2.975732 ACATCTGACTGCGATGTGAT 57.024 45.000 4.99 0.00 46.99 3.06
2729 7990 1.713597 TTGCACTACATCTGACTGCG 58.286 50.000 0.00 0.00 0.00 5.18
2730 7991 3.264947 TGATTGCACTACATCTGACTGC 58.735 45.455 0.00 0.00 0.00 4.40
2736 7997 5.683876 AGGTTACTGATTGCACTACATCT 57.316 39.130 0.00 0.00 0.00 2.90
2752 8013 2.084546 GTCACTCCAATGCCAGGTTAC 58.915 52.381 0.00 0.00 0.00 2.50
2759 8022 1.598701 GCAAGGGTCACTCCAATGCC 61.599 60.000 0.00 0.00 40.84 4.40
2776 8039 1.218047 CCAAGTCTTCCGATCGGCA 59.782 57.895 29.62 18.63 34.68 5.69
2783 8046 1.123928 AGATAGGGCCAAGTCTTCCG 58.876 55.000 6.18 0.00 0.00 4.30
2794 8057 4.447290 GAGAAAGGAAGACAAGATAGGGC 58.553 47.826 0.00 0.00 0.00 5.19
2838 8101 1.035932 TCGCCCCAACAAAACCGAAA 61.036 50.000 0.00 0.00 0.00 3.46
2848 8111 0.394352 AACCTCATCATCGCCCCAAC 60.394 55.000 0.00 0.00 0.00 3.77
2862 8125 2.125773 TCAGACCTACTCCGAACCTC 57.874 55.000 0.00 0.00 0.00 3.85
2878 8141 5.428496 ACAACAATGCCATATTCGATCAG 57.572 39.130 0.00 0.00 0.00 2.90
2879 8142 4.275689 GGACAACAATGCCATATTCGATCA 59.724 41.667 0.00 0.00 0.00 2.92
2880 8143 4.275689 TGGACAACAATGCCATATTCGATC 59.724 41.667 0.00 0.00 30.85 3.69
2937 8200 0.035439 GCCCGAGGAGTGAAATTGGA 60.035 55.000 0.00 0.00 0.00 3.53
2938 8201 1.369091 CGCCCGAGGAGTGAAATTGG 61.369 60.000 0.00 0.00 0.00 3.16
2985 8248 7.175641 CCCATTCTGGATATCTAAAACACCATC 59.824 40.741 2.05 0.00 40.96 3.51
3023 8286 3.018856 TCCTCAATGATTGGTCATGTGC 58.981 45.455 5.20 0.00 44.20 4.57
3032 8295 2.372264 CCCCACACTCCTCAATGATTG 58.628 52.381 0.00 0.00 0.00 2.67
3052 8315 7.979444 TTGGAATAATCGATGTATTCTTCCC 57.021 36.000 23.95 16.07 39.56 3.97


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.