Multiple sequence alignment - TraesCS7D01G136400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G136400 chr7D 100.000 3823 0 0 1 3823 87508389 87504567 0.000000e+00 7060
1 TraesCS7D01G136400 chr7D 86.678 593 68 7 1527 2118 87486965 87486383 0.000000e+00 647
2 TraesCS7D01G136400 chr7D 88.660 194 17 1 2184 2372 87486207 87486014 8.260000e-57 231
3 TraesCS7D01G136400 chr7A 91.765 2198 161 10 1396 3581 89044229 89042040 0.000000e+00 3038
4 TraesCS7D01G136400 chr7A 87.532 770 63 18 609 1356 89044989 89044231 0.000000e+00 859
5 TraesCS7D01G136400 chr7A 87.926 646 75 2 2184 2828 89035844 89035201 0.000000e+00 758
6 TraesCS7D01G136400 chr7A 85.160 593 74 9 1527 2118 89036632 89036053 2.540000e-166 595
7 TraesCS7D01G136400 chr7A 85.897 390 46 7 978 1360 89037353 89036966 1.280000e-109 407
8 TraesCS7D01G136400 chr7A 84.431 167 13 5 3579 3736 89041773 89041611 6.610000e-33 152
9 TraesCS7D01G136400 chr7B 92.770 1314 77 7 2198 3504 36490164 36488862 0.000000e+00 1884
10 TraesCS7D01G136400 chr7B 87.198 1531 143 31 632 2150 36491779 36490290 0.000000e+00 1692
11 TraesCS7D01G136400 chr7B 86.824 592 69 7 1527 2118 36473559 36472977 0.000000e+00 652
12 TraesCS7D01G136400 chr7B 87.404 389 40 7 978 1359 36474266 36473880 4.530000e-119 438
13 TraesCS7D01G136400 chr7B 94.834 271 11 3 3553 3823 36481899 36481632 1.640000e-113 420
14 TraesCS7D01G136400 chr7B 96.552 203 6 1 256 457 60822348 60822550 6.120000e-88 335
15 TraesCS7D01G136400 chr7B 91.971 137 11 0 2203 2339 36472777 36472641 3.900000e-45 193
16 TraesCS7D01G136400 chr7B 81.395 215 29 8 2 215 36492203 36491999 8.500000e-37 165
17 TraesCS7D01G136400 chr7B 98.701 77 1 0 3491 3567 36481995 36481919 1.850000e-28 137
18 TraesCS7D01G136400 chr3A 96.517 201 7 0 257 457 6816547 6816747 2.200000e-87 333
19 TraesCS7D01G136400 chr3A 96.517 201 7 0 257 457 6841413 6841613 2.200000e-87 333
20 TraesCS7D01G136400 chr3A 96.517 201 7 0 257 457 6864681 6864881 2.200000e-87 333
21 TraesCS7D01G136400 chr3A 96.020 201 8 0 257 457 6793097 6793297 1.020000e-85 327
22 TraesCS7D01G136400 chr3A 96.020 201 8 0 256 456 6869506 6869706 1.020000e-85 327
23 TraesCS7D01G136400 chr3A 95.522 201 9 0 256 456 6821357 6821557 4.760000e-84 322
24 TraesCS7D01G136400 chrUn 96.020 201 8 0 256 456 347634985 347634785 1.020000e-85 327
25 TraesCS7D01G136400 chr1B 94.581 203 10 1 256 457 268621557 268621355 2.870000e-81 313


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G136400 chr7D 87504567 87508389 3822 True 7060.000000 7060 100.000000 1 3823 1 chr7D.!!$R1 3822
1 TraesCS7D01G136400 chr7D 87486014 87486965 951 True 439.000000 647 87.669000 1527 2372 2 chr7D.!!$R2 845
2 TraesCS7D01G136400 chr7A 89041611 89044989 3378 True 1349.666667 3038 87.909333 609 3736 3 chr7A.!!$R2 3127
3 TraesCS7D01G136400 chr7A 89035201 89037353 2152 True 586.666667 758 86.327667 978 2828 3 chr7A.!!$R1 1850
4 TraesCS7D01G136400 chr7B 36488862 36492203 3341 True 1247.000000 1884 87.121000 2 3504 3 chr7B.!!$R3 3502
5 TraesCS7D01G136400 chr7B 36472641 36474266 1625 True 427.666667 652 88.733000 978 2339 3 chr7B.!!$R1 1361

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
285 289 0.035739 TTGTGGGAAGCGTAGAACCC 59.964 55.0 0.00 0.00 42.37 4.11 F
290 294 0.245813 GGAAGCGTAGAACCCTTCGT 59.754 55.0 0.00 0.00 36.66 3.85 F
571 630 0.251653 ACCAGCGGTAGGAACTGAGA 60.252 55.0 9.57 0.00 41.52 3.27 F
1927 2260 0.307760 GGTGGTTCGACAAGCTTGTG 59.692 55.0 35.67 25.18 42.43 3.33 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1371 1456 0.661020 AAAAACGACTTGCAGACCGG 59.339 50.0 0.00 0.0 0.00 5.28 R
2066 2399 0.821711 TTTGTGACCTTCCCTTGCCG 60.822 55.0 0.00 0.0 0.00 5.69 R
2504 3036 0.986019 CCCTACCCATAGCCCACACA 60.986 60.0 0.00 0.0 0.00 3.72 R
3581 4137 0.467384 TGAGGCCTCAAGATGCTAGC 59.533 55.0 33.41 8.1 36.53 3.42 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 6.183360 ACCCATTTTTAGTTTTCACCGTGAAT 60.183 34.615 14.64 3.16 36.11 2.57
40 41 6.364976 CCCATTTTTAGTTTTCACCGTGAATC 59.635 38.462 14.64 10.85 36.11 2.52
41 42 6.920758 CCATTTTTAGTTTTCACCGTGAATCA 59.079 34.615 14.64 2.49 36.11 2.57
56 57 4.279169 CGTGAATCATATTCCAGCCCAATT 59.721 41.667 0.00 0.00 0.00 2.32
59 60 5.537295 TGAATCATATTCCAGCCCAATTCAG 59.463 40.000 0.00 0.00 30.68 3.02
61 62 5.645056 TCATATTCCAGCCCAATTCAGTA 57.355 39.130 0.00 0.00 0.00 2.74
64 65 2.787473 TCCAGCCCAATTCAGTACAG 57.213 50.000 0.00 0.00 0.00 2.74
85 86 4.685165 CAGAGCTCTCCAATTCATACATCG 59.315 45.833 14.96 0.00 0.00 3.84
104 105 4.330944 TCGAAACAGAGCCTAAGTTTCA 57.669 40.909 16.80 6.16 46.98 2.69
105 106 4.699637 TCGAAACAGAGCCTAAGTTTCAA 58.300 39.130 16.80 1.62 46.98 2.69
108 109 5.333416 CGAAACAGAGCCTAAGTTTCAACTC 60.333 44.000 16.80 0.00 46.98 3.01
109 110 4.689612 ACAGAGCCTAAGTTTCAACTCA 57.310 40.909 0.00 0.00 38.57 3.41
110 111 5.036117 ACAGAGCCTAAGTTTCAACTCAA 57.964 39.130 0.00 0.00 38.57 3.02
111 112 5.059833 ACAGAGCCTAAGTTTCAACTCAAG 58.940 41.667 0.00 0.00 38.57 3.02
112 113 5.163301 ACAGAGCCTAAGTTTCAACTCAAGA 60.163 40.000 0.00 0.00 38.57 3.02
113 114 5.407995 CAGAGCCTAAGTTTCAACTCAAGAG 59.592 44.000 0.00 0.00 38.57 2.85
114 115 4.068599 AGCCTAAGTTTCAACTCAAGAGC 58.931 43.478 0.00 1.54 38.57 4.09
115 116 4.068599 GCCTAAGTTTCAACTCAAGAGCT 58.931 43.478 0.00 0.00 38.57 4.09
116 117 4.153296 GCCTAAGTTTCAACTCAAGAGCTC 59.847 45.833 5.27 5.27 38.57 4.09
117 118 5.546526 CCTAAGTTTCAACTCAAGAGCTCT 58.453 41.667 11.45 11.45 38.57 4.09
118 119 5.637387 CCTAAGTTTCAACTCAAGAGCTCTC 59.363 44.000 18.55 0.00 38.57 3.20
122 123 4.630644 TTCAACTCAAGAGCTCTCCAAT 57.369 40.909 18.55 0.00 0.00 3.16
123 124 4.630644 TCAACTCAAGAGCTCTCCAATT 57.369 40.909 18.55 7.05 0.00 2.32
124 125 4.573900 TCAACTCAAGAGCTCTCCAATTC 58.426 43.478 18.55 0.00 0.00 2.17
129 130 7.609097 ACTCAAGAGCTCTCCAATTCATATA 57.391 36.000 18.55 0.00 0.00 0.86
130 131 8.027524 ACTCAAGAGCTCTCCAATTCATATAA 57.972 34.615 18.55 0.00 0.00 0.98
133 134 5.803552 AGAGCTCTCCAATTCATATAAGCC 58.196 41.667 11.45 0.00 0.00 4.35
143 144 8.632679 TCCAATTCATATAAGCCTGATTGTTTC 58.367 33.333 0.00 0.00 0.00 2.78
155 159 5.917447 GCCTGATTGTTTCTTCTCAAAGTTC 59.083 40.000 0.00 0.00 33.95 3.01
194 198 2.433436 ACCTAGAATGTTGGTTTCGGC 58.567 47.619 0.00 0.00 0.00 5.54
201 205 0.461516 TGTTGGTTTCGGCGTACACA 60.462 50.000 6.85 5.50 0.00 3.72
205 209 1.532007 TGGTTTCGGCGTACACAATTC 59.468 47.619 6.85 0.00 0.00 2.17
206 210 1.135888 GGTTTCGGCGTACACAATTCC 60.136 52.381 6.85 0.00 0.00 3.01
211 215 1.264557 CGGCGTACACAATTCCAAACA 59.735 47.619 0.00 0.00 0.00 2.83
215 219 3.241701 CGTACACAATTCCAAACATGCC 58.758 45.455 0.00 0.00 0.00 4.40
216 220 2.837532 ACACAATTCCAAACATGCCC 57.162 45.000 0.00 0.00 0.00 5.36
220 224 2.705127 ACAATTCCAAACATGCCCTTGT 59.295 40.909 0.00 0.00 0.00 3.16
221 225 3.136260 ACAATTCCAAACATGCCCTTGTT 59.864 39.130 0.00 0.00 41.49 2.83
222 226 2.906691 TTCCAAACATGCCCTTGTTG 57.093 45.000 0.00 0.00 39.68 3.33
223 227 0.392336 TCCAAACATGCCCTTGTTGC 59.608 50.000 0.00 0.00 39.68 4.17
224 228 0.393820 CCAAACATGCCCTTGTTGCT 59.606 50.000 0.00 0.00 39.68 3.91
226 230 1.122227 AAACATGCCCTTGTTGCTGT 58.878 45.000 0.00 0.00 39.68 4.40
227 231 0.390124 AACATGCCCTTGTTGCTGTG 59.610 50.000 0.00 0.00 38.37 3.66
228 232 1.373748 CATGCCCTTGTTGCTGTGC 60.374 57.895 0.00 0.00 0.00 4.57
229 233 1.532316 ATGCCCTTGTTGCTGTGCT 60.532 52.632 0.00 0.00 0.00 4.40
230 234 1.530013 ATGCCCTTGTTGCTGTGCTC 61.530 55.000 0.00 0.00 0.00 4.26
231 235 1.900498 GCCCTTGTTGCTGTGCTCT 60.900 57.895 0.00 0.00 0.00 4.09
232 236 1.458639 GCCCTTGTTGCTGTGCTCTT 61.459 55.000 0.00 0.00 0.00 2.85
233 237 0.313043 CCCTTGTTGCTGTGCTCTTG 59.687 55.000 0.00 0.00 0.00 3.02
234 238 0.313043 CCTTGTTGCTGTGCTCTTGG 59.687 55.000 0.00 0.00 0.00 3.61
238 242 1.416030 TGTTGCTGTGCTCTTGGAGTA 59.584 47.619 0.00 0.00 31.39 2.59
239 243 2.072298 GTTGCTGTGCTCTTGGAGTAG 58.928 52.381 0.00 0.00 31.39 2.57
250 254 6.830912 TGCTCTTGGAGTAGCATGTTTATAT 58.169 36.000 0.00 0.00 43.56 0.86
252 256 7.442364 TGCTCTTGGAGTAGCATGTTTATATTC 59.558 37.037 0.00 0.00 43.56 1.75
253 257 7.359598 GCTCTTGGAGTAGCATGTTTATATTCG 60.360 40.741 0.00 0.00 38.63 3.34
254 258 7.722363 TCTTGGAGTAGCATGTTTATATTCGA 58.278 34.615 0.00 0.00 0.00 3.71
255 259 7.652105 TCTTGGAGTAGCATGTTTATATTCGAC 59.348 37.037 0.00 0.00 0.00 4.20
256 260 6.811954 TGGAGTAGCATGTTTATATTCGACA 58.188 36.000 0.00 0.00 0.00 4.35
257 261 7.441836 TGGAGTAGCATGTTTATATTCGACAT 58.558 34.615 0.00 0.00 34.52 3.06
271 275 7.962964 ATATTCGACATGTAAGGTATTGTGG 57.037 36.000 0.00 0.00 0.00 4.17
272 276 4.131649 TCGACATGTAAGGTATTGTGGG 57.868 45.455 0.00 0.00 0.00 4.61
273 277 3.770388 TCGACATGTAAGGTATTGTGGGA 59.230 43.478 0.00 0.00 0.00 4.37
274 278 4.223255 TCGACATGTAAGGTATTGTGGGAA 59.777 41.667 0.00 0.00 0.00 3.97
275 279 4.570772 CGACATGTAAGGTATTGTGGGAAG 59.429 45.833 0.00 0.00 0.00 3.46
276 280 4.270008 ACATGTAAGGTATTGTGGGAAGC 58.730 43.478 0.00 0.00 0.00 3.86
277 281 2.980568 TGTAAGGTATTGTGGGAAGCG 58.019 47.619 0.00 0.00 0.00 4.68
278 282 2.303600 TGTAAGGTATTGTGGGAAGCGT 59.696 45.455 0.00 0.00 0.00 5.07
279 283 3.514706 TGTAAGGTATTGTGGGAAGCGTA 59.485 43.478 0.00 0.00 0.00 4.42
280 284 2.981859 AGGTATTGTGGGAAGCGTAG 57.018 50.000 0.00 0.00 0.00 3.51
281 285 2.463752 AGGTATTGTGGGAAGCGTAGA 58.536 47.619 0.00 0.00 0.00 2.59
282 286 2.835764 AGGTATTGTGGGAAGCGTAGAA 59.164 45.455 0.00 0.00 0.00 2.10
283 287 2.934553 GGTATTGTGGGAAGCGTAGAAC 59.065 50.000 0.00 0.00 0.00 3.01
284 288 2.109425 ATTGTGGGAAGCGTAGAACC 57.891 50.000 0.00 0.00 0.00 3.62
285 289 0.035739 TTGTGGGAAGCGTAGAACCC 59.964 55.000 0.00 0.00 42.37 4.11
286 290 0.834687 TGTGGGAAGCGTAGAACCCT 60.835 55.000 0.00 0.00 42.49 4.34
287 291 0.323957 GTGGGAAGCGTAGAACCCTT 59.676 55.000 0.00 0.00 42.49 3.95
288 292 0.611714 TGGGAAGCGTAGAACCCTTC 59.388 55.000 0.00 0.00 42.49 3.46
289 293 0.459759 GGGAAGCGTAGAACCCTTCG 60.460 60.000 0.00 0.00 39.28 3.79
290 294 0.245813 GGAAGCGTAGAACCCTTCGT 59.754 55.000 0.00 0.00 36.66 3.85
291 295 1.626747 GAAGCGTAGAACCCTTCGTC 58.373 55.000 0.00 0.00 35.90 4.20
292 296 1.201880 GAAGCGTAGAACCCTTCGTCT 59.798 52.381 0.00 0.00 35.90 4.18
293 297 0.526662 AGCGTAGAACCCTTCGTCTG 59.473 55.000 0.00 0.00 35.90 3.51
294 298 0.458025 GCGTAGAACCCTTCGTCTGG 60.458 60.000 0.00 0.00 35.90 3.86
301 305 4.473520 CCTTCGTCTGGGCCGCAT 62.474 66.667 0.00 0.00 0.00 4.73
302 306 2.436646 CTTCGTCTGGGCCGCATT 60.437 61.111 0.00 0.00 0.00 3.56
303 307 2.745884 TTCGTCTGGGCCGCATTG 60.746 61.111 0.00 0.00 0.00 2.82
306 310 3.142838 GTCTGGGCCGCATTGCAT 61.143 61.111 9.69 0.00 0.00 3.96
307 311 2.362760 TCTGGGCCGCATTGCATT 60.363 55.556 9.69 0.00 0.00 3.56
308 312 1.077140 TCTGGGCCGCATTGCATTA 60.077 52.632 9.69 0.00 0.00 1.90
309 313 0.467844 TCTGGGCCGCATTGCATTAT 60.468 50.000 9.69 0.00 0.00 1.28
310 314 1.202867 TCTGGGCCGCATTGCATTATA 60.203 47.619 9.69 0.00 0.00 0.98
311 315 1.820519 CTGGGCCGCATTGCATTATAT 59.179 47.619 9.69 0.00 0.00 0.86
312 316 3.016031 CTGGGCCGCATTGCATTATATA 58.984 45.455 9.69 0.00 0.00 0.86
313 317 3.016031 TGGGCCGCATTGCATTATATAG 58.984 45.455 9.69 0.00 0.00 1.31
314 318 3.278574 GGGCCGCATTGCATTATATAGA 58.721 45.455 9.69 0.00 0.00 1.98
315 319 3.694072 GGGCCGCATTGCATTATATAGAA 59.306 43.478 9.69 0.00 0.00 2.10
316 320 4.157656 GGGCCGCATTGCATTATATAGAAA 59.842 41.667 9.69 0.00 0.00 2.52
317 321 5.095490 GGCCGCATTGCATTATATAGAAAC 58.905 41.667 9.69 0.00 0.00 2.78
318 322 5.335583 GGCCGCATTGCATTATATAGAAACA 60.336 40.000 9.69 0.00 0.00 2.83
319 323 6.324819 GCCGCATTGCATTATATAGAAACAT 58.675 36.000 9.69 0.00 0.00 2.71
320 324 6.808212 GCCGCATTGCATTATATAGAAACATT 59.192 34.615 9.69 0.00 0.00 2.71
321 325 7.201376 GCCGCATTGCATTATATAGAAACATTG 60.201 37.037 9.69 0.00 0.00 2.82
322 326 7.201376 CCGCATTGCATTATATAGAAACATTGC 60.201 37.037 9.69 15.92 32.52 3.56
323 327 7.201376 CGCATTGCATTATATAGAAACATTGCC 60.201 37.037 18.03 8.55 32.32 4.52
324 328 7.201376 GCATTGCATTATATAGAAACATTGCCG 60.201 37.037 15.44 3.16 30.70 5.69
325 329 6.875948 TGCATTATATAGAAACATTGCCGT 57.124 33.333 2.01 0.00 0.00 5.68
326 330 6.667370 TGCATTATATAGAAACATTGCCGTG 58.333 36.000 2.01 0.00 0.00 4.94
327 331 6.086222 GCATTATATAGAAACATTGCCGTGG 58.914 40.000 0.00 0.00 0.00 4.94
328 332 5.682943 TTATATAGAAACATTGCCGTGGC 57.317 39.130 3.30 3.30 42.35 5.01
329 333 2.128771 ATAGAAACATTGCCGTGGCT 57.871 45.000 12.84 0.00 42.51 4.75
330 334 1.904287 TAGAAACATTGCCGTGGCTT 58.096 45.000 12.84 0.00 42.51 4.35
331 335 1.904287 AGAAACATTGCCGTGGCTTA 58.096 45.000 12.84 0.44 42.51 3.09
332 336 1.539827 AGAAACATTGCCGTGGCTTAC 59.460 47.619 12.84 0.00 42.51 2.34
333 337 1.268352 GAAACATTGCCGTGGCTTACA 59.732 47.619 12.84 0.00 42.51 2.41
334 338 1.323412 AACATTGCCGTGGCTTACAA 58.677 45.000 12.84 0.00 42.51 2.41
335 339 0.881118 ACATTGCCGTGGCTTACAAG 59.119 50.000 12.84 0.00 42.51 3.16
341 345 3.204505 CGTGGCTTACAAGGAACGA 57.795 52.632 0.00 0.00 33.03 3.85
342 346 1.722011 CGTGGCTTACAAGGAACGAT 58.278 50.000 0.00 0.00 33.03 3.73
343 347 1.659098 CGTGGCTTACAAGGAACGATC 59.341 52.381 0.00 0.00 33.03 3.69
344 348 1.659098 GTGGCTTACAAGGAACGATCG 59.341 52.381 14.88 14.88 0.00 3.69
345 349 1.546923 TGGCTTACAAGGAACGATCGA 59.453 47.619 24.34 0.00 0.00 3.59
346 350 2.167693 TGGCTTACAAGGAACGATCGAT 59.832 45.455 24.34 10.66 0.00 3.59
347 351 2.795470 GGCTTACAAGGAACGATCGATC 59.205 50.000 24.34 19.93 0.00 3.69
359 363 1.954598 CGATCGATCGTAACGAGAACG 59.045 52.381 33.95 9.71 44.74 3.95
360 364 2.296563 GATCGATCGTAACGAGAACGG 58.703 52.381 15.94 0.00 42.81 4.44
361 365 1.358877 TCGATCGTAACGAGAACGGA 58.641 50.000 15.94 0.00 44.46 4.69
362 366 1.935873 TCGATCGTAACGAGAACGGAT 59.064 47.619 15.94 2.87 44.46 4.18
363 367 2.033407 TCGATCGTAACGAGAACGGATC 60.033 50.000 15.94 8.90 44.46 3.36
364 368 2.296563 GATCGTAACGAGAACGGATCG 58.703 52.381 8.56 4.88 45.54 3.69
365 369 1.358877 TCGTAACGAGAACGGATCGA 58.641 50.000 12.22 0.00 42.76 3.59
366 370 1.935873 TCGTAACGAGAACGGATCGAT 59.064 47.619 12.22 0.00 42.76 3.59
367 371 2.033407 TCGTAACGAGAACGGATCGATC 60.033 50.000 17.36 17.36 42.76 3.69
368 372 2.286008 CGTAACGAGAACGGATCGATCA 60.286 50.000 25.93 0.00 42.76 2.92
369 373 2.933495 AACGAGAACGGATCGATCAA 57.067 45.000 25.93 0.00 42.76 2.57
370 374 2.476873 ACGAGAACGGATCGATCAAG 57.523 50.000 25.93 20.32 42.76 3.02
371 375 1.065701 ACGAGAACGGATCGATCAAGG 59.934 52.381 25.93 16.40 42.76 3.61
372 376 1.065701 CGAGAACGGATCGATCAAGGT 59.934 52.381 25.93 17.82 42.76 3.50
373 377 2.479730 CGAGAACGGATCGATCAAGGTT 60.480 50.000 25.93 23.25 42.76 3.50
374 378 3.242969 CGAGAACGGATCGATCAAGGTTA 60.243 47.826 25.93 0.00 42.76 2.85
375 379 4.679662 GAGAACGGATCGATCAAGGTTAA 58.320 43.478 25.93 0.00 31.23 2.01
376 380 5.080969 AGAACGGATCGATCAAGGTTAAA 57.919 39.130 25.93 0.00 31.23 1.52
377 381 5.109903 AGAACGGATCGATCAAGGTTAAAG 58.890 41.667 25.93 8.22 31.23 1.85
378 382 3.793559 ACGGATCGATCAAGGTTAAAGG 58.206 45.455 25.93 5.09 0.00 3.11
379 383 3.449737 ACGGATCGATCAAGGTTAAAGGA 59.550 43.478 25.93 0.00 0.00 3.36
380 384 4.051922 CGGATCGATCAAGGTTAAAGGAG 58.948 47.826 25.93 0.00 0.00 3.69
381 385 4.441634 CGGATCGATCAAGGTTAAAGGAGT 60.442 45.833 25.93 0.00 0.00 3.85
382 386 5.429130 GGATCGATCAAGGTTAAAGGAGTT 58.571 41.667 25.93 0.00 0.00 3.01
383 387 5.294552 GGATCGATCAAGGTTAAAGGAGTTG 59.705 44.000 25.93 0.00 0.00 3.16
384 388 4.575885 TCGATCAAGGTTAAAGGAGTTGG 58.424 43.478 0.00 0.00 0.00 3.77
385 389 4.285003 TCGATCAAGGTTAAAGGAGTTGGA 59.715 41.667 0.00 0.00 0.00 3.53
386 390 5.001232 CGATCAAGGTTAAAGGAGTTGGAA 58.999 41.667 0.00 0.00 0.00 3.53
387 391 5.106673 CGATCAAGGTTAAAGGAGTTGGAAC 60.107 44.000 0.00 0.00 0.00 3.62
388 392 5.118729 TCAAGGTTAAAGGAGTTGGAACA 57.881 39.130 0.00 0.00 0.00 3.18
389 393 5.130350 TCAAGGTTAAAGGAGTTGGAACAG 58.870 41.667 0.00 0.00 42.39 3.16
390 394 5.104277 TCAAGGTTAAAGGAGTTGGAACAGA 60.104 40.000 0.00 0.00 42.39 3.41
391 395 5.382664 AGGTTAAAGGAGTTGGAACAGAA 57.617 39.130 0.00 0.00 42.39 3.02
392 396 5.377478 AGGTTAAAGGAGTTGGAACAGAAG 58.623 41.667 0.00 0.00 42.39 2.85
393 397 5.132144 AGGTTAAAGGAGTTGGAACAGAAGA 59.868 40.000 0.00 0.00 42.39 2.87
394 398 5.826208 GGTTAAAGGAGTTGGAACAGAAGAA 59.174 40.000 0.00 0.00 42.39 2.52
395 399 6.017026 GGTTAAAGGAGTTGGAACAGAAGAAG 60.017 42.308 0.00 0.00 42.39 2.85
396 400 3.778954 AGGAGTTGGAACAGAAGAAGG 57.221 47.619 0.00 0.00 42.39 3.46
397 401 2.373502 AGGAGTTGGAACAGAAGAAGGG 59.626 50.000 0.00 0.00 42.39 3.95
398 402 2.372172 GGAGTTGGAACAGAAGAAGGGA 59.628 50.000 0.00 0.00 42.39 4.20
399 403 3.009584 GGAGTTGGAACAGAAGAAGGGAT 59.990 47.826 0.00 0.00 42.39 3.85
400 404 4.225267 GGAGTTGGAACAGAAGAAGGGATA 59.775 45.833 0.00 0.00 42.39 2.59
401 405 5.423886 GAGTTGGAACAGAAGAAGGGATAG 58.576 45.833 0.00 0.00 42.39 2.08
402 406 5.094387 AGTTGGAACAGAAGAAGGGATAGA 58.906 41.667 0.00 0.00 42.39 1.98
403 407 5.548056 AGTTGGAACAGAAGAAGGGATAGAA 59.452 40.000 0.00 0.00 42.39 2.10
404 408 5.683876 TGGAACAGAAGAAGGGATAGAAG 57.316 43.478 0.00 0.00 0.00 2.85
405 409 5.342017 TGGAACAGAAGAAGGGATAGAAGA 58.658 41.667 0.00 0.00 0.00 2.87
406 410 5.187967 TGGAACAGAAGAAGGGATAGAAGAC 59.812 44.000 0.00 0.00 0.00 3.01
407 411 5.187967 GGAACAGAAGAAGGGATAGAAGACA 59.812 44.000 0.00 0.00 0.00 3.41
408 412 5.930837 ACAGAAGAAGGGATAGAAGACAG 57.069 43.478 0.00 0.00 0.00 3.51
409 413 5.584913 ACAGAAGAAGGGATAGAAGACAGA 58.415 41.667 0.00 0.00 0.00 3.41
410 414 5.656416 ACAGAAGAAGGGATAGAAGACAGAG 59.344 44.000 0.00 0.00 0.00 3.35
411 415 5.656416 CAGAAGAAGGGATAGAAGACAGAGT 59.344 44.000 0.00 0.00 0.00 3.24
412 416 6.831353 CAGAAGAAGGGATAGAAGACAGAGTA 59.169 42.308 0.00 0.00 0.00 2.59
413 417 6.831868 AGAAGAAGGGATAGAAGACAGAGTAC 59.168 42.308 0.00 0.00 0.00 2.73
414 418 6.080969 AGAAGGGATAGAAGACAGAGTACA 57.919 41.667 0.00 0.00 0.00 2.90
415 419 6.494952 AGAAGGGATAGAAGACAGAGTACAA 58.505 40.000 0.00 0.00 0.00 2.41
416 420 7.129425 AGAAGGGATAGAAGACAGAGTACAAT 58.871 38.462 0.00 0.00 0.00 2.71
417 421 7.621683 AGAAGGGATAGAAGACAGAGTACAATT 59.378 37.037 0.00 0.00 0.00 2.32
418 422 7.741554 AGGGATAGAAGACAGAGTACAATTT 57.258 36.000 0.00 0.00 0.00 1.82
419 423 8.840200 AGGGATAGAAGACAGAGTACAATTTA 57.160 34.615 0.00 0.00 0.00 1.40
420 424 9.268282 AGGGATAGAAGACAGAGTACAATTTAA 57.732 33.333 0.00 0.00 0.00 1.52
421 425 9.886132 GGGATAGAAGACAGAGTACAATTTAAA 57.114 33.333 0.00 0.00 0.00 1.52
435 439 9.722184 AGTACAATTTAAACTACTTTCCTCTCC 57.278 33.333 0.00 0.00 0.00 3.71
436 440 7.997773 ACAATTTAAACTACTTTCCTCTCCC 57.002 36.000 0.00 0.00 0.00 4.30
437 441 7.756614 ACAATTTAAACTACTTTCCTCTCCCT 58.243 34.615 0.00 0.00 0.00 4.20
438 442 8.887393 ACAATTTAAACTACTTTCCTCTCCCTA 58.113 33.333 0.00 0.00 0.00 3.53
439 443 9.907229 CAATTTAAACTACTTTCCTCTCCCTAT 57.093 33.333 0.00 0.00 0.00 2.57
442 446 9.551339 TTTAAACTACTTTCCTCTCCCTATACA 57.449 33.333 0.00 0.00 0.00 2.29
443 447 9.551339 TTAAACTACTTTCCTCTCCCTATACAA 57.449 33.333 0.00 0.00 0.00 2.41
444 448 7.421087 AACTACTTTCCTCTCCCTATACAAC 57.579 40.000 0.00 0.00 0.00 3.32
445 449 6.743788 ACTACTTTCCTCTCCCTATACAACT 58.256 40.000 0.00 0.00 0.00 3.16
446 450 7.190501 ACTACTTTCCTCTCCCTATACAACTT 58.809 38.462 0.00 0.00 0.00 2.66
447 451 8.342270 ACTACTTTCCTCTCCCTATACAACTTA 58.658 37.037 0.00 0.00 0.00 2.24
448 452 9.369672 CTACTTTCCTCTCCCTATACAACTTAT 57.630 37.037 0.00 0.00 0.00 1.73
449 453 8.252624 ACTTTCCTCTCCCTATACAACTTATC 57.747 38.462 0.00 0.00 0.00 1.75
450 454 7.290481 ACTTTCCTCTCCCTATACAACTTATCC 59.710 40.741 0.00 0.00 0.00 2.59
451 455 6.547396 TCCTCTCCCTATACAACTTATCCT 57.453 41.667 0.00 0.00 0.00 3.24
452 456 7.658887 TCCTCTCCCTATACAACTTATCCTA 57.341 40.000 0.00 0.00 0.00 2.94
453 457 8.065385 TCCTCTCCCTATACAACTTATCCTAA 57.935 38.462 0.00 0.00 0.00 2.69
454 458 7.949006 TCCTCTCCCTATACAACTTATCCTAAC 59.051 40.741 0.00 0.00 0.00 2.34
455 459 7.728981 CCTCTCCCTATACAACTTATCCTAACA 59.271 40.741 0.00 0.00 0.00 2.41
456 460 8.474710 TCTCCCTATACAACTTATCCTAACAC 57.525 38.462 0.00 0.00 0.00 3.32
462 466 5.717078 ACAACTTATCCTAACACGACAGA 57.283 39.130 0.00 0.00 0.00 3.41
483 487 9.157104 GACAGACTATCATATTATCGACTCTGA 57.843 37.037 0.00 0.00 0.00 3.27
484 488 8.941977 ACAGACTATCATATTATCGACTCTGAC 58.058 37.037 0.00 0.00 0.00 3.51
492 496 7.803659 TCATATTATCGACTCTGACAACGAATC 59.196 37.037 0.00 0.00 38.22 2.52
493 497 3.850122 ATCGACTCTGACAACGAATCA 57.150 42.857 0.00 0.00 38.22 2.57
494 498 3.203161 TCGACTCTGACAACGAATCAG 57.797 47.619 8.43 8.43 44.22 2.90
495 499 2.552743 TCGACTCTGACAACGAATCAGT 59.447 45.455 12.68 0.00 43.47 3.41
496 500 2.658802 CGACTCTGACAACGAATCAGTG 59.341 50.000 12.68 12.58 43.47 3.66
498 502 4.299155 GACTCTGACAACGAATCAGTGAA 58.701 43.478 17.69 1.87 43.47 3.18
499 503 4.693283 ACTCTGACAACGAATCAGTGAAA 58.307 39.130 17.69 1.61 43.47 2.69
500 504 4.747108 ACTCTGACAACGAATCAGTGAAAG 59.253 41.667 17.69 10.19 43.47 2.62
501 505 4.058124 TCTGACAACGAATCAGTGAAAGG 58.942 43.478 0.00 0.00 43.47 3.11
502 506 2.548057 TGACAACGAATCAGTGAAAGGC 59.452 45.455 0.00 0.00 0.00 4.35
503 507 1.880027 ACAACGAATCAGTGAAAGGCC 59.120 47.619 0.00 0.00 0.00 5.19
504 508 1.135972 CAACGAATCAGTGAAAGGCCG 60.136 52.381 0.00 0.00 0.00 6.13
505 509 0.673644 ACGAATCAGTGAAAGGCCGG 60.674 55.000 0.00 0.00 0.00 6.13
506 510 0.391130 CGAATCAGTGAAAGGCCGGA 60.391 55.000 5.05 0.00 0.00 5.14
534 593 4.793201 ACCCTCTTTTAAAACTGTGCTCT 58.207 39.130 0.00 0.00 0.00 4.09
549 608 6.940739 ACTGTGCTCTTGATACTTGTATCTT 58.059 36.000 18.08 0.00 0.00 2.40
551 610 6.935167 TGTGCTCTTGATACTTGTATCTTCA 58.065 36.000 18.08 8.58 0.00 3.02
552 611 7.386059 TGTGCTCTTGATACTTGTATCTTCAA 58.614 34.615 18.08 8.16 0.00 2.69
558 617 5.109210 TGATACTTGTATCTTCAACCAGCG 58.891 41.667 18.08 0.00 0.00 5.18
560 619 2.038557 ACTTGTATCTTCAACCAGCGGT 59.961 45.455 0.00 0.00 37.65 5.68
561 620 3.259876 ACTTGTATCTTCAACCAGCGGTA 59.740 43.478 0.62 0.00 33.12 4.02
562 621 3.520290 TGTATCTTCAACCAGCGGTAG 57.480 47.619 0.62 0.00 33.12 3.18
563 622 2.167693 TGTATCTTCAACCAGCGGTAGG 59.832 50.000 0.62 0.00 33.12 3.18
564 623 1.568504 ATCTTCAACCAGCGGTAGGA 58.431 50.000 9.57 0.41 33.12 2.94
565 624 1.344065 TCTTCAACCAGCGGTAGGAA 58.656 50.000 9.57 7.37 33.12 3.36
566 625 1.001633 TCTTCAACCAGCGGTAGGAAC 59.998 52.381 9.57 0.00 33.12 3.62
567 626 1.002087 CTTCAACCAGCGGTAGGAACT 59.998 52.381 9.57 0.00 46.37 3.01
568 627 0.320374 TCAACCAGCGGTAGGAACTG 59.680 55.000 9.57 0.00 41.52 3.16
569 628 0.320374 CAACCAGCGGTAGGAACTGA 59.680 55.000 9.57 0.00 41.52 3.41
570 629 0.608640 AACCAGCGGTAGGAACTGAG 59.391 55.000 9.57 0.00 41.52 3.35
571 630 0.251653 ACCAGCGGTAGGAACTGAGA 60.252 55.000 9.57 0.00 41.52 3.27
572 631 0.457851 CCAGCGGTAGGAACTGAGAG 59.542 60.000 0.00 0.00 41.52 3.20
573 632 0.457851 CAGCGGTAGGAACTGAGAGG 59.542 60.000 0.00 0.00 41.52 3.69
574 633 0.684805 AGCGGTAGGAACTGAGAGGG 60.685 60.000 0.00 0.00 41.52 4.30
575 634 1.677637 GCGGTAGGAACTGAGAGGGG 61.678 65.000 0.00 0.00 41.52 4.79
576 635 0.324460 CGGTAGGAACTGAGAGGGGT 60.324 60.000 0.00 0.00 41.52 4.95
577 636 1.487300 GGTAGGAACTGAGAGGGGTC 58.513 60.000 0.00 0.00 41.52 4.46
578 637 1.273098 GGTAGGAACTGAGAGGGGTCA 60.273 57.143 0.00 0.00 41.52 4.02
589 648 2.056906 GAGGGGTCAGTTGCCAGTGT 62.057 60.000 0.00 0.00 0.00 3.55
599 658 4.275689 TCAGTTGCCAGTGTTGTCAATTAG 59.724 41.667 0.00 0.00 0.00 1.73
600 659 4.036734 CAGTTGCCAGTGTTGTCAATTAGT 59.963 41.667 0.00 0.00 0.00 2.24
601 660 5.238432 CAGTTGCCAGTGTTGTCAATTAGTA 59.762 40.000 0.00 0.00 0.00 1.82
602 661 5.238650 AGTTGCCAGTGTTGTCAATTAGTAC 59.761 40.000 0.00 0.00 0.00 2.73
603 662 4.968259 TGCCAGTGTTGTCAATTAGTACT 58.032 39.130 0.00 0.00 0.00 2.73
604 663 6.104146 TGCCAGTGTTGTCAATTAGTACTA 57.896 37.500 0.00 0.00 0.00 1.82
605 664 5.929992 TGCCAGTGTTGTCAATTAGTACTAC 59.070 40.000 0.91 0.00 0.00 2.73
607 666 6.128634 GCCAGTGTTGTCAATTAGTACTACAC 60.129 42.308 17.02 17.02 46.08 2.90
615 674 6.866770 TGTCAATTAGTACTACACTTGCAGTC 59.133 38.462 0.91 1.27 38.80 3.51
619 678 3.768878 AGTACTACACTTGCAGTCCTCT 58.231 45.455 0.00 0.00 31.59 3.69
622 681 2.560542 ACTACACTTGCAGTCCTCTGAG 59.439 50.000 0.00 0.00 43.76 3.35
628 687 1.180907 TGCAGTCCTCTGAGCACTAG 58.819 55.000 0.00 0.00 43.76 2.57
630 689 1.135141 GCAGTCCTCTGAGCACTAGTG 60.135 57.143 18.93 18.93 43.76 2.74
651 710 2.356844 GGTAACCCATGAGTTCCCTTCC 60.357 54.545 0.00 0.00 0.00 3.46
664 723 1.626825 TCCCTTCCAAGAGTTAACCCG 59.373 52.381 0.88 0.00 0.00 5.28
688 747 2.587612 GCTATCTAGCGAGTCGAGTG 57.412 55.000 18.61 4.73 39.82 3.51
767 829 3.742786 AGTAATATTTTGTGCACGTGCG 58.257 40.909 33.22 1.65 45.83 5.34
786 848 2.854805 GCGCTGTTTCTCAAAGTCCAAC 60.855 50.000 0.00 0.00 0.00 3.77
788 850 2.354821 GCTGTTTCTCAAAGTCCAACGT 59.645 45.455 0.00 0.00 0.00 3.99
792 854 2.684001 TCTCAAAGTCCAACGTGTGT 57.316 45.000 0.00 0.00 0.00 3.72
795 857 4.505808 TCTCAAAGTCCAACGTGTGTTAA 58.494 39.130 0.00 0.00 36.28 2.01
809 871 2.030628 TGTGTTAAGCGTGATCGAGACA 60.031 45.455 0.00 0.00 39.71 3.41
818 880 2.533535 CGTGATCGAGACAGAAAGATGC 59.466 50.000 0.00 0.00 39.71 3.91
891 954 2.375174 ACTTTCCACAGGCACCTCAATA 59.625 45.455 0.00 0.00 0.00 1.90
908 971 6.158695 ACCTCAATAATTCACCTGGACTACAT 59.841 38.462 0.00 0.00 0.00 2.29
955 1025 4.019858 TCTCCCAATCTCTCTGTGTGTAG 58.980 47.826 0.00 0.00 0.00 2.74
1005 1086 4.309099 CAAATAGCACAACAACAATGGCT 58.691 39.130 0.00 0.00 35.50 4.75
1009 1090 1.069049 GCACAACAACAATGGCTCCTT 59.931 47.619 0.00 0.00 0.00 3.36
1080 1164 4.040829 CCAATACTCATCATAGCTCCCACA 59.959 45.833 0.00 0.00 0.00 4.17
1123 1207 2.358898 GCTGTTGGCAAGAAGAAGAACA 59.641 45.455 12.76 0.00 41.35 3.18
1157 1241 2.686835 GAGTCCCCTGAGGCTGCT 60.687 66.667 0.00 0.00 34.51 4.24
1253 1338 3.005539 ATCCACCTGCAGCTCGGT 61.006 61.111 8.66 0.00 0.00 4.69
1360 1445 2.727123 TCACCAGGCAAGTTCTTTCA 57.273 45.000 0.00 0.00 0.00 2.69
1384 1495 1.966451 CAACCCCGGTCTGCAAGTC 60.966 63.158 0.00 0.00 33.76 3.01
1391 1618 1.333791 CCGGTCTGCAAGTCGTTTTTC 60.334 52.381 0.00 0.00 33.76 2.29
1441 1669 9.683069 AAGAATCTGTAAACATCAACAATTGTC 57.317 29.630 12.39 0.00 0.00 3.18
1776 2109 1.091771 ATTGACGGCTTCATCGGCAG 61.092 55.000 0.00 0.00 46.85 4.85
1819 2152 1.303309 GCGCCAAGCTCATGAAGTAT 58.697 50.000 0.00 0.00 44.04 2.12
1870 2203 4.083862 GTCGCCCTCTCCGCCTTT 62.084 66.667 0.00 0.00 0.00 3.11
1882 2215 2.401766 CGCCTTTTCTGCGCAGGAT 61.402 57.895 35.36 0.00 46.01 3.24
1892 2225 1.449601 GCGCAGGATTTCTTCCCGA 60.450 57.895 0.30 0.00 46.81 5.14
1894 2227 1.090052 CGCAGGATTTCTTCCCGACC 61.090 60.000 0.00 0.00 46.81 4.79
1896 2229 1.340114 GCAGGATTTCTTCCCGACCTT 60.340 52.381 0.00 0.00 46.81 3.50
1927 2260 0.307760 GGTGGTTCGACAAGCTTGTG 59.692 55.000 35.67 25.18 42.43 3.33
1939 2272 3.970410 CTTGTGGGGCTGGAGGCA 61.970 66.667 2.29 0.00 44.01 4.75
1972 2305 4.411927 GGATATTCCTAGAGCTGGACTCA 58.588 47.826 0.00 0.00 39.79 3.41
1981 2314 3.784701 GAGCTGGACTCATACTTCGAA 57.215 47.619 0.00 0.00 45.49 3.71
1990 2323 4.579869 ACTCATACTTCGAAATGGTGCTT 58.420 39.130 9.39 0.00 0.00 3.91
2066 2399 4.507710 TGTGTTGATCAGTCTATGGAAGC 58.492 43.478 0.00 0.00 0.00 3.86
2151 2494 7.112452 TCTCTGAAGCTAACACTGCATATAA 57.888 36.000 0.00 0.00 0.00 0.98
2152 2495 7.205992 TCTCTGAAGCTAACACTGCATATAAG 58.794 38.462 0.00 0.00 0.00 1.73
2158 2501 6.284459 AGCTAACACTGCATATAAGTTCTCC 58.716 40.000 0.00 0.00 0.00 3.71
2261 2793 2.423538 GGTGACATTGTTGTGGGCTATC 59.576 50.000 0.00 0.00 35.79 2.08
2325 2857 3.942115 GGCAGAGATAAGGAGTTTGGTTC 59.058 47.826 0.00 0.00 0.00 3.62
2327 2859 4.822026 CAGAGATAAGGAGTTTGGTTCGT 58.178 43.478 0.00 0.00 0.00 3.85
2329 2861 4.283722 AGAGATAAGGAGTTTGGTTCGTGT 59.716 41.667 0.00 0.00 0.00 4.49
2342 2874 2.540101 GGTTCGTGTCAAACAGAGACTG 59.460 50.000 0.00 0.00 38.32 3.51
2477 3009 0.324091 AGGTCCTCGGGTACGACATT 60.324 55.000 0.00 0.00 45.59 2.71
2481 3013 1.041447 CCTCGGGTACGACATTCCCT 61.041 60.000 0.00 0.00 45.59 4.20
2504 3036 5.551233 TCGAAGACAAGGATCTTTGTGAAT 58.449 37.500 26.02 12.46 41.15 2.57
2519 3051 0.998928 TGAATGTGTGGGCTATGGGT 59.001 50.000 0.00 0.00 0.00 4.51
2573 3105 3.136992 AGTTTTACCCGGAGAGGTTTGAA 59.863 43.478 0.73 0.00 41.58 2.69
2660 3192 1.775877 CCCTGCTATCCCCATGGGT 60.776 63.158 29.33 14.66 44.74 4.51
2720 3252 2.027625 GTTCGACTGGGAGTTGCCG 61.028 63.158 0.00 0.00 37.63 5.69
2744 3276 1.068055 GGCGTGAGGAAAGAAGACGTA 60.068 52.381 0.00 0.00 32.66 3.57
2806 3338 5.350504 ACTCCTCTGTATCTTGTTCCATG 57.649 43.478 0.00 0.00 0.00 3.66
2841 3373 9.494271 CTGGCTAAAGCATGAATTTAGACTATA 57.506 33.333 25.25 12.82 44.97 1.31
3057 3596 5.784578 ATAAAACACCCTCCAACTTGTTC 57.215 39.130 0.00 0.00 30.92 3.18
3226 3765 5.631119 ACACTTCTAAAATGTTGCCTAGGT 58.369 37.500 11.31 0.00 0.00 3.08
3241 3792 3.181454 GCCTAGGTTAGCATTGGAAGCTA 60.181 47.826 11.31 0.00 43.25 3.32
3340 3891 7.228507 GCATGGATGTGTGTGGTATAGATAAAA 59.771 37.037 0.00 0.00 0.00 1.52
3341 3892 9.119418 CATGGATGTGTGTGGTATAGATAAAAA 57.881 33.333 0.00 0.00 0.00 1.94
3386 3937 6.128172 TGCTTGCTCAAGTTAGATAAAGAAGC 60.128 38.462 10.86 0.00 40.45 3.86
3554 4110 5.220303 GCACTCGATTCACAACTCTAATGAC 60.220 44.000 0.00 0.00 0.00 3.06
3557 4113 7.063898 CACTCGATTCACAACTCTAATGACAAT 59.936 37.037 0.00 0.00 0.00 2.71
3564 4120 6.314648 TCACAACTCTAATGACAATGATGCTC 59.685 38.462 0.00 0.00 0.00 4.26
3582 4138 7.712264 GATGCTCATCATCTATTGGTATAGC 57.288 40.000 5.07 0.00 46.29 2.97
3583 4139 6.864151 TGCTCATCATCTATTGGTATAGCT 57.136 37.500 3.20 0.00 34.85 3.32
3614 4439 2.906389 AGGCCTCAAGTCACAATCTACA 59.094 45.455 0.00 0.00 0.00 2.74
3624 4449 3.260884 GTCACAATCTACACAGAAGGGGA 59.739 47.826 0.00 0.00 33.50 4.81
3625 4450 4.080863 GTCACAATCTACACAGAAGGGGAT 60.081 45.833 0.00 0.00 33.50 3.85
3627 4452 4.163078 CACAATCTACACAGAAGGGGATCT 59.837 45.833 0.00 0.00 33.50 2.75
3637 4471 4.686891 CAGAAGGGGATCTGGATCTATCT 58.313 47.826 9.96 6.42 42.52 1.98
3639 4473 6.259893 CAGAAGGGGATCTGGATCTATCTAA 58.740 44.000 9.96 0.00 42.52 2.10
3641 4475 6.728632 AGAAGGGGATCTGGATCTATCTAAAC 59.271 42.308 9.96 0.00 37.92 2.01
3674 4508 6.211584 ACTTTCTATTCCTTGTGTCTCTGCTA 59.788 38.462 0.00 0.00 0.00 3.49
3686 4520 4.396478 GTGTCTCTGCTACTCAGTGTATGA 59.604 45.833 0.00 0.00 43.32 2.15
3688 4522 3.623510 TCTCTGCTACTCAGTGTATGACG 59.376 47.826 0.00 0.00 43.32 4.35
3710 4544 6.204075 CGATATGTCGGAAAATCAAGACTC 57.796 41.667 3.61 0.00 44.00 3.36
3711 4545 5.748630 CGATATGTCGGAAAATCAAGACTCA 59.251 40.000 3.61 0.00 44.00 3.41
3712 4546 6.255670 CGATATGTCGGAAAATCAAGACTCAA 59.744 38.462 3.61 0.00 44.00 3.02
3713 4547 5.869753 ATGTCGGAAAATCAAGACTCAAG 57.130 39.130 6.72 0.00 34.92 3.02
3741 4575 9.605275 TGGCTATATGAATTAGAGTATTGATGC 57.395 33.333 0.00 0.00 0.00 3.91
3742 4576 9.829507 GGCTATATGAATTAGAGTATTGATGCT 57.170 33.333 0.00 0.00 0.00 3.79
3797 4631 8.641499 TTTTTAACAGGTGCAAGAAATTGTAG 57.359 30.769 0.00 0.00 0.00 2.74
3798 4632 4.853924 AACAGGTGCAAGAAATTGTAGG 57.146 40.909 0.00 0.00 0.00 3.18
3799 4633 4.098914 ACAGGTGCAAGAAATTGTAGGA 57.901 40.909 0.00 0.00 0.00 2.94
3800 4634 4.469657 ACAGGTGCAAGAAATTGTAGGAA 58.530 39.130 0.00 0.00 0.00 3.36
3801 4635 4.892934 ACAGGTGCAAGAAATTGTAGGAAA 59.107 37.500 0.00 0.00 0.00 3.13
3802 4636 5.362430 ACAGGTGCAAGAAATTGTAGGAAAA 59.638 36.000 0.00 0.00 0.00 2.29
3803 4637 5.922544 CAGGTGCAAGAAATTGTAGGAAAAG 59.077 40.000 0.00 0.00 0.00 2.27
3804 4638 5.011023 AGGTGCAAGAAATTGTAGGAAAAGG 59.989 40.000 0.00 0.00 0.00 3.11
3805 4639 5.221441 GGTGCAAGAAATTGTAGGAAAAGGT 60.221 40.000 0.00 0.00 0.00 3.50
3806 4640 6.280643 GTGCAAGAAATTGTAGGAAAAGGTT 58.719 36.000 0.00 0.00 0.00 3.50
3807 4641 6.200854 GTGCAAGAAATTGTAGGAAAAGGTTG 59.799 38.462 0.00 0.00 0.00 3.77
3808 4642 5.696270 GCAAGAAATTGTAGGAAAAGGTTGG 59.304 40.000 0.00 0.00 0.00 3.77
3809 4643 6.462347 GCAAGAAATTGTAGGAAAAGGTTGGA 60.462 38.462 0.00 0.00 0.00 3.53
3810 4644 7.496747 CAAGAAATTGTAGGAAAAGGTTGGAA 58.503 34.615 0.00 0.00 0.00 3.53
3811 4645 7.669089 AGAAATTGTAGGAAAAGGTTGGAAA 57.331 32.000 0.00 0.00 0.00 3.13
3812 4646 8.084985 AGAAATTGTAGGAAAAGGTTGGAAAA 57.915 30.769 0.00 0.00 0.00 2.29
3813 4647 8.544622 AGAAATTGTAGGAAAAGGTTGGAAAAA 58.455 29.630 0.00 0.00 0.00 1.94
3814 4648 8.731275 AAATTGTAGGAAAAGGTTGGAAAAAG 57.269 30.769 0.00 0.00 0.00 2.27
3815 4649 7.669089 ATTGTAGGAAAAGGTTGGAAAAAGA 57.331 32.000 0.00 0.00 0.00 2.52
3816 4650 7.669089 TTGTAGGAAAAGGTTGGAAAAAGAT 57.331 32.000 0.00 0.00 0.00 2.40
3817 4651 7.049799 TGTAGGAAAAGGTTGGAAAAAGATG 57.950 36.000 0.00 0.00 0.00 2.90
3818 4652 5.551305 AGGAAAAGGTTGGAAAAAGATGG 57.449 39.130 0.00 0.00 0.00 3.51
3819 4653 5.215845 AGGAAAAGGTTGGAAAAAGATGGA 58.784 37.500 0.00 0.00 0.00 3.41
3820 4654 5.665360 AGGAAAAGGTTGGAAAAAGATGGAA 59.335 36.000 0.00 0.00 0.00 3.53
3821 4655 6.329986 AGGAAAAGGTTGGAAAAAGATGGAAT 59.670 34.615 0.00 0.00 0.00 3.01
3822 4656 6.998074 GGAAAAGGTTGGAAAAAGATGGAATT 59.002 34.615 0.00 0.00 0.00 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 7.608376 TGGAATATGATTCACGGTGAAAACTAA 59.392 33.333 25.64 11.95 40.12 2.24
23 24 7.106890 TGGAATATGATTCACGGTGAAAACTA 58.893 34.615 25.64 16.69 40.12 2.24
31 32 2.487265 GGGCTGGAATATGATTCACGGT 60.487 50.000 1.90 0.00 0.00 4.83
32 33 2.154462 GGGCTGGAATATGATTCACGG 58.846 52.381 1.90 0.00 0.00 4.94
33 34 2.849942 TGGGCTGGAATATGATTCACG 58.150 47.619 1.90 0.00 0.00 4.35
39 40 4.524802 ACTGAATTGGGCTGGAATATGA 57.475 40.909 0.00 0.00 0.00 2.15
40 41 5.132502 TGTACTGAATTGGGCTGGAATATG 58.867 41.667 0.00 0.00 0.00 1.78
41 42 5.132648 TCTGTACTGAATTGGGCTGGAATAT 59.867 40.000 0.00 0.00 0.00 1.28
56 57 4.089361 TGAATTGGAGAGCTCTGTACTGA 58.911 43.478 23.91 5.06 0.00 3.41
59 60 5.907207 TGTATGAATTGGAGAGCTCTGTAC 58.093 41.667 23.91 11.76 0.00 2.90
61 62 5.609423 GATGTATGAATTGGAGAGCTCTGT 58.391 41.667 23.91 0.00 0.00 3.41
64 65 4.876125 TCGATGTATGAATTGGAGAGCTC 58.124 43.478 5.27 5.27 0.00 4.09
85 86 5.527582 TGAGTTGAAACTTAGGCTCTGTTTC 59.472 40.000 25.36 25.36 45.51 2.78
104 105 4.630644 TGAATTGGAGAGCTCTTGAGTT 57.369 40.909 19.36 10.28 0.00 3.01
105 106 4.840716 ATGAATTGGAGAGCTCTTGAGT 57.159 40.909 19.36 6.14 0.00 3.41
108 109 6.149142 GGCTTATATGAATTGGAGAGCTCTTG 59.851 42.308 19.36 0.00 0.00 3.02
109 110 6.044171 AGGCTTATATGAATTGGAGAGCTCTT 59.956 38.462 19.36 0.00 0.00 2.85
110 111 5.547276 AGGCTTATATGAATTGGAGAGCTCT 59.453 40.000 18.28 18.28 0.00 4.09
111 112 5.642919 CAGGCTTATATGAATTGGAGAGCTC 59.357 44.000 5.27 5.27 0.00 4.09
112 113 5.309020 TCAGGCTTATATGAATTGGAGAGCT 59.691 40.000 0.00 0.00 0.00 4.09
113 114 5.555017 TCAGGCTTATATGAATTGGAGAGC 58.445 41.667 0.00 0.00 0.00 4.09
114 115 7.664731 ACAATCAGGCTTATATGAATTGGAGAG 59.335 37.037 0.00 0.00 0.00 3.20
115 116 7.520798 ACAATCAGGCTTATATGAATTGGAGA 58.479 34.615 0.00 0.00 0.00 3.71
116 117 7.756395 ACAATCAGGCTTATATGAATTGGAG 57.244 36.000 0.00 0.00 0.00 3.86
117 118 8.537728 AAACAATCAGGCTTATATGAATTGGA 57.462 30.769 0.00 0.00 0.00 3.53
118 119 8.636213 AGAAACAATCAGGCTTATATGAATTGG 58.364 33.333 0.00 0.00 0.00 3.16
122 123 9.113838 GAGAAGAAACAATCAGGCTTATATGAA 57.886 33.333 0.00 0.00 0.00 2.57
123 124 8.267183 TGAGAAGAAACAATCAGGCTTATATGA 58.733 33.333 0.00 0.00 0.00 2.15
124 125 8.442632 TGAGAAGAAACAATCAGGCTTATATG 57.557 34.615 0.00 0.00 0.00 1.78
129 130 5.595952 ACTTTGAGAAGAAACAATCAGGCTT 59.404 36.000 0.00 0.00 36.69 4.35
130 131 5.136105 ACTTTGAGAAGAAACAATCAGGCT 58.864 37.500 0.00 0.00 36.69 4.58
133 134 7.475015 TGTGAACTTTGAGAAGAAACAATCAG 58.525 34.615 0.00 0.00 36.69 2.90
146 147 9.875675 TTGAAAAACAAAATTGTGAACTTTGAG 57.124 25.926 1.62 0.00 41.31 3.02
185 189 1.532007 GAATTGTGTACGCCGAAACCA 59.468 47.619 3.51 0.00 0.00 3.67
191 195 1.264557 TGTTTGGAATTGTGTACGCCG 59.735 47.619 3.51 0.00 0.00 6.46
194 198 3.241701 GGCATGTTTGGAATTGTGTACG 58.758 45.455 0.00 0.00 0.00 3.67
201 205 3.742385 CAACAAGGGCATGTTTGGAATT 58.258 40.909 5.30 0.00 41.44 2.17
205 209 0.393820 AGCAACAAGGGCATGTTTGG 59.606 50.000 5.30 0.00 41.44 3.28
206 210 1.202557 ACAGCAACAAGGGCATGTTTG 60.203 47.619 5.30 5.63 41.44 2.93
211 215 1.530013 GAGCACAGCAACAAGGGCAT 61.530 55.000 0.00 0.00 0.00 4.40
215 219 0.313043 CCAAGAGCACAGCAACAAGG 59.687 55.000 0.00 0.00 0.00 3.61
216 220 1.266175 CTCCAAGAGCACAGCAACAAG 59.734 52.381 0.00 0.00 0.00 3.16
220 224 1.609061 GCTACTCCAAGAGCACAGCAA 60.609 52.381 7.98 0.00 38.62 3.91
221 225 0.036952 GCTACTCCAAGAGCACAGCA 60.037 55.000 7.98 0.00 38.62 4.41
222 226 0.036952 TGCTACTCCAAGAGCACAGC 60.037 55.000 0.00 6.53 43.64 4.40
227 231 7.359598 CGAATATAAACATGCTACTCCAAGAGC 60.360 40.741 0.00 0.00 39.25 4.09
228 232 7.867909 TCGAATATAAACATGCTACTCCAAGAG 59.132 37.037 0.00 0.00 35.52 2.85
229 233 7.652105 GTCGAATATAAACATGCTACTCCAAGA 59.348 37.037 0.00 0.00 0.00 3.02
230 234 7.438160 TGTCGAATATAAACATGCTACTCCAAG 59.562 37.037 0.00 0.00 0.00 3.61
231 235 7.269316 TGTCGAATATAAACATGCTACTCCAA 58.731 34.615 0.00 0.00 0.00 3.53
232 236 6.811954 TGTCGAATATAAACATGCTACTCCA 58.188 36.000 0.00 0.00 0.00 3.86
233 237 7.733608 CATGTCGAATATAAACATGCTACTCC 58.266 38.462 10.38 0.00 42.51 3.85
250 254 4.223255 TCCCACAATACCTTACATGTCGAA 59.777 41.667 0.00 0.00 0.00 3.71
252 256 4.131649 TCCCACAATACCTTACATGTCG 57.868 45.455 0.00 0.00 0.00 4.35
253 257 4.335594 GCTTCCCACAATACCTTACATGTC 59.664 45.833 0.00 0.00 0.00 3.06
254 258 4.270008 GCTTCCCACAATACCTTACATGT 58.730 43.478 2.69 2.69 0.00 3.21
255 259 3.312421 CGCTTCCCACAATACCTTACATG 59.688 47.826 0.00 0.00 0.00 3.21
256 260 3.054655 ACGCTTCCCACAATACCTTACAT 60.055 43.478 0.00 0.00 0.00 2.29
257 261 2.303600 ACGCTTCCCACAATACCTTACA 59.696 45.455 0.00 0.00 0.00 2.41
258 262 2.981898 ACGCTTCCCACAATACCTTAC 58.018 47.619 0.00 0.00 0.00 2.34
259 263 4.025360 TCTACGCTTCCCACAATACCTTA 58.975 43.478 0.00 0.00 0.00 2.69
260 264 2.835764 TCTACGCTTCCCACAATACCTT 59.164 45.455 0.00 0.00 0.00 3.50
261 265 2.463752 TCTACGCTTCCCACAATACCT 58.536 47.619 0.00 0.00 0.00 3.08
262 266 2.934553 GTTCTACGCTTCCCACAATACC 59.065 50.000 0.00 0.00 0.00 2.73
263 267 2.934553 GGTTCTACGCTTCCCACAATAC 59.065 50.000 0.00 0.00 0.00 1.89
264 268 2.093341 GGGTTCTACGCTTCCCACAATA 60.093 50.000 0.00 0.00 39.68 1.90
265 269 1.339727 GGGTTCTACGCTTCCCACAAT 60.340 52.381 0.00 0.00 39.68 2.71
266 270 0.035739 GGGTTCTACGCTTCCCACAA 59.964 55.000 0.00 0.00 39.68 3.33
267 271 0.834687 AGGGTTCTACGCTTCCCACA 60.835 55.000 0.00 0.00 38.28 4.17
268 272 0.323957 AAGGGTTCTACGCTTCCCAC 59.676 55.000 3.61 0.00 46.59 4.61
269 273 2.768046 AAGGGTTCTACGCTTCCCA 58.232 52.632 3.61 0.00 46.59 4.37
274 278 0.526662 CAGACGAAGGGTTCTACGCT 59.473 55.000 0.00 0.00 43.70 5.07
275 279 0.458025 CCAGACGAAGGGTTCTACGC 60.458 60.000 0.00 0.00 0.00 4.42
276 280 0.172803 CCCAGACGAAGGGTTCTACG 59.827 60.000 0.00 0.00 41.61 3.51
284 288 3.976701 AATGCGGCCCAGACGAAGG 62.977 63.158 0.00 0.00 35.20 3.46
285 289 2.436646 AATGCGGCCCAGACGAAG 60.437 61.111 0.00 0.00 35.20 3.79
286 290 2.745884 CAATGCGGCCCAGACGAA 60.746 61.111 0.00 0.00 35.20 3.85
289 293 1.383456 TAATGCAATGCGGCCCAGAC 61.383 55.000 0.00 0.00 0.00 3.51
290 294 0.467844 ATAATGCAATGCGGCCCAGA 60.468 50.000 0.00 0.00 0.00 3.86
291 295 1.246649 TATAATGCAATGCGGCCCAG 58.753 50.000 0.00 0.00 0.00 4.45
292 296 1.921982 ATATAATGCAATGCGGCCCA 58.078 45.000 0.00 0.00 0.00 5.36
293 297 3.278574 TCTATATAATGCAATGCGGCCC 58.721 45.455 0.00 0.00 0.00 5.80
294 298 4.963276 TTCTATATAATGCAATGCGGCC 57.037 40.909 0.00 0.00 0.00 6.13
295 299 5.698832 TGTTTCTATATAATGCAATGCGGC 58.301 37.500 0.00 0.00 0.00 6.53
296 300 7.201376 GCAATGTTTCTATATAATGCAATGCGG 60.201 37.037 0.00 0.00 33.00 5.69
297 301 7.201376 GGCAATGTTTCTATATAATGCAATGCG 60.201 37.037 0.00 0.00 33.61 4.73
298 302 7.201376 CGGCAATGTTTCTATATAATGCAATGC 60.201 37.037 0.00 0.00 34.37 3.56
299 303 7.809331 ACGGCAATGTTTCTATATAATGCAATG 59.191 33.333 0.00 0.00 34.37 2.82
300 304 7.809331 CACGGCAATGTTTCTATATAATGCAAT 59.191 33.333 0.00 0.00 34.37 3.56
301 305 7.138081 CACGGCAATGTTTCTATATAATGCAA 58.862 34.615 0.00 0.00 34.37 4.08
302 306 6.293900 CCACGGCAATGTTTCTATATAATGCA 60.294 38.462 0.00 0.00 34.37 3.96
303 307 6.086222 CCACGGCAATGTTTCTATATAATGC 58.914 40.000 0.00 0.00 0.00 3.56
304 308 6.072508 AGCCACGGCAATGTTTCTATATAATG 60.073 38.462 11.35 0.00 44.88 1.90
305 309 6.003950 AGCCACGGCAATGTTTCTATATAAT 58.996 36.000 11.35 0.00 44.88 1.28
306 310 5.373222 AGCCACGGCAATGTTTCTATATAA 58.627 37.500 11.35 0.00 44.88 0.98
307 311 4.968259 AGCCACGGCAATGTTTCTATATA 58.032 39.130 11.35 0.00 44.88 0.86
308 312 3.820557 AGCCACGGCAATGTTTCTATAT 58.179 40.909 11.35 0.00 44.88 0.86
309 313 3.275617 AGCCACGGCAATGTTTCTATA 57.724 42.857 11.35 0.00 44.88 1.31
310 314 2.128771 AGCCACGGCAATGTTTCTAT 57.871 45.000 11.35 0.00 44.88 1.98
311 315 1.904287 AAGCCACGGCAATGTTTCTA 58.096 45.000 11.35 0.00 44.88 2.10
312 316 1.539827 GTAAGCCACGGCAATGTTTCT 59.460 47.619 11.35 0.00 44.88 2.52
313 317 1.268352 TGTAAGCCACGGCAATGTTTC 59.732 47.619 11.35 0.00 44.88 2.78
314 318 1.323412 TGTAAGCCACGGCAATGTTT 58.677 45.000 11.35 0.00 44.88 2.83
315 319 1.269448 CTTGTAAGCCACGGCAATGTT 59.731 47.619 11.35 0.00 44.88 2.71
316 320 0.881118 CTTGTAAGCCACGGCAATGT 59.119 50.000 11.35 0.00 44.88 2.71
317 321 0.171007 CCTTGTAAGCCACGGCAATG 59.829 55.000 11.35 0.00 44.88 2.82
318 322 0.037590 TCCTTGTAAGCCACGGCAAT 59.962 50.000 11.35 1.02 44.88 3.56
319 323 0.179015 TTCCTTGTAAGCCACGGCAA 60.179 50.000 11.35 0.00 44.88 4.52
320 324 0.887387 GTTCCTTGTAAGCCACGGCA 60.887 55.000 11.35 0.00 44.88 5.69
321 325 1.873863 GTTCCTTGTAAGCCACGGC 59.126 57.895 0.00 0.00 42.33 5.68
322 326 0.320073 TCGTTCCTTGTAAGCCACGG 60.320 55.000 11.46 0.00 33.38 4.94
323 327 1.659098 GATCGTTCCTTGTAAGCCACG 59.341 52.381 7.22 7.22 33.66 4.94
324 328 1.659098 CGATCGTTCCTTGTAAGCCAC 59.341 52.381 7.03 0.00 0.00 5.01
325 329 1.546923 TCGATCGTTCCTTGTAAGCCA 59.453 47.619 15.94 0.00 0.00 4.75
326 330 2.288961 TCGATCGTTCCTTGTAAGCC 57.711 50.000 15.94 0.00 0.00 4.35
327 331 2.468040 CGATCGATCGTTCCTTGTAAGC 59.532 50.000 33.95 0.43 44.74 3.09
339 343 3.210559 CCGTTCTCGTTACGATCGATCG 61.211 54.545 38.53 38.53 44.52 3.69
340 344 2.033407 TCCGTTCTCGTTACGATCGATC 60.033 50.000 24.34 15.68 41.33 3.69
341 345 1.935873 TCCGTTCTCGTTACGATCGAT 59.064 47.619 24.34 8.79 41.33 3.59
342 346 1.358877 TCCGTTCTCGTTACGATCGA 58.641 50.000 24.34 9.82 41.33 3.59
343 347 2.296563 GATCCGTTCTCGTTACGATCG 58.703 52.381 14.88 14.88 41.33 3.69
344 348 2.033407 TCGATCCGTTCTCGTTACGATC 60.033 50.000 8.21 0.00 41.33 3.69
345 349 1.935873 TCGATCCGTTCTCGTTACGAT 59.064 47.619 8.21 0.00 41.33 3.73
346 350 1.358877 TCGATCCGTTCTCGTTACGA 58.641 50.000 7.39 7.39 41.33 3.43
347 351 2.286008 TGATCGATCCGTTCTCGTTACG 60.286 50.000 22.31 0.00 37.40 3.18
348 352 3.329743 TGATCGATCCGTTCTCGTTAC 57.670 47.619 22.31 0.00 37.40 2.50
349 353 3.242969 CCTTGATCGATCCGTTCTCGTTA 60.243 47.826 22.31 0.00 37.40 3.18
350 354 2.479730 CCTTGATCGATCCGTTCTCGTT 60.480 50.000 22.31 0.00 37.40 3.85
351 355 1.065701 CCTTGATCGATCCGTTCTCGT 59.934 52.381 22.31 0.00 37.40 4.18
352 356 1.065701 ACCTTGATCGATCCGTTCTCG 59.934 52.381 22.31 5.71 37.47 4.04
353 357 2.873133 ACCTTGATCGATCCGTTCTC 57.127 50.000 22.31 0.00 0.00 2.87
354 358 4.730949 TTAACCTTGATCGATCCGTTCT 57.269 40.909 22.31 7.22 0.00 3.01
355 359 4.270325 CCTTTAACCTTGATCGATCCGTTC 59.730 45.833 22.31 0.00 0.00 3.95
356 360 4.081309 TCCTTTAACCTTGATCGATCCGTT 60.081 41.667 22.31 20.88 0.00 4.44
357 361 3.449737 TCCTTTAACCTTGATCGATCCGT 59.550 43.478 22.31 12.68 0.00 4.69
358 362 4.051922 CTCCTTTAACCTTGATCGATCCG 58.948 47.826 22.31 13.03 0.00 4.18
359 363 5.024785 ACTCCTTTAACCTTGATCGATCC 57.975 43.478 22.31 5.50 0.00 3.36
360 364 5.294552 CCAACTCCTTTAACCTTGATCGATC 59.705 44.000 18.72 18.72 0.00 3.69
361 365 5.045869 TCCAACTCCTTTAACCTTGATCGAT 60.046 40.000 0.00 0.00 0.00 3.59
362 366 4.285003 TCCAACTCCTTTAACCTTGATCGA 59.715 41.667 0.00 0.00 0.00 3.59
363 367 4.575885 TCCAACTCCTTTAACCTTGATCG 58.424 43.478 0.00 0.00 0.00 3.69
364 368 5.768164 TGTTCCAACTCCTTTAACCTTGATC 59.232 40.000 0.00 0.00 0.00 2.92
365 369 5.701224 TGTTCCAACTCCTTTAACCTTGAT 58.299 37.500 0.00 0.00 0.00 2.57
366 370 5.104277 TCTGTTCCAACTCCTTTAACCTTGA 60.104 40.000 0.00 0.00 0.00 3.02
367 371 5.130350 TCTGTTCCAACTCCTTTAACCTTG 58.870 41.667 0.00 0.00 0.00 3.61
368 372 5.382664 TCTGTTCCAACTCCTTTAACCTT 57.617 39.130 0.00 0.00 0.00 3.50
369 373 5.132144 TCTTCTGTTCCAACTCCTTTAACCT 59.868 40.000 0.00 0.00 0.00 3.50
370 374 5.374071 TCTTCTGTTCCAACTCCTTTAACC 58.626 41.667 0.00 0.00 0.00 2.85
371 375 6.017026 CCTTCTTCTGTTCCAACTCCTTTAAC 60.017 42.308 0.00 0.00 0.00 2.01
372 376 6.062095 CCTTCTTCTGTTCCAACTCCTTTAA 58.938 40.000 0.00 0.00 0.00 1.52
373 377 5.456186 CCCTTCTTCTGTTCCAACTCCTTTA 60.456 44.000 0.00 0.00 0.00 1.85
374 378 4.464947 CCTTCTTCTGTTCCAACTCCTTT 58.535 43.478 0.00 0.00 0.00 3.11
375 379 3.181439 CCCTTCTTCTGTTCCAACTCCTT 60.181 47.826 0.00 0.00 0.00 3.36
376 380 2.373502 CCCTTCTTCTGTTCCAACTCCT 59.626 50.000 0.00 0.00 0.00 3.69
377 381 2.372172 TCCCTTCTTCTGTTCCAACTCC 59.628 50.000 0.00 0.00 0.00 3.85
378 382 3.771577 TCCCTTCTTCTGTTCCAACTC 57.228 47.619 0.00 0.00 0.00 3.01
379 383 5.094387 TCTATCCCTTCTTCTGTTCCAACT 58.906 41.667 0.00 0.00 0.00 3.16
380 384 5.422214 TCTATCCCTTCTTCTGTTCCAAC 57.578 43.478 0.00 0.00 0.00 3.77
381 385 5.785423 TCTTCTATCCCTTCTTCTGTTCCAA 59.215 40.000 0.00 0.00 0.00 3.53
382 386 5.187967 GTCTTCTATCCCTTCTTCTGTTCCA 59.812 44.000 0.00 0.00 0.00 3.53
383 387 5.187967 TGTCTTCTATCCCTTCTTCTGTTCC 59.812 44.000 0.00 0.00 0.00 3.62
384 388 6.153680 TCTGTCTTCTATCCCTTCTTCTGTTC 59.846 42.308 0.00 0.00 0.00 3.18
385 389 6.019748 TCTGTCTTCTATCCCTTCTTCTGTT 58.980 40.000 0.00 0.00 0.00 3.16
386 390 5.584913 TCTGTCTTCTATCCCTTCTTCTGT 58.415 41.667 0.00 0.00 0.00 3.41
387 391 5.656416 ACTCTGTCTTCTATCCCTTCTTCTG 59.344 44.000 0.00 0.00 0.00 3.02
388 392 5.837829 ACTCTGTCTTCTATCCCTTCTTCT 58.162 41.667 0.00 0.00 0.00 2.85
389 393 6.603997 TGTACTCTGTCTTCTATCCCTTCTTC 59.396 42.308 0.00 0.00 0.00 2.87
390 394 6.494952 TGTACTCTGTCTTCTATCCCTTCTT 58.505 40.000 0.00 0.00 0.00 2.52
391 395 6.080969 TGTACTCTGTCTTCTATCCCTTCT 57.919 41.667 0.00 0.00 0.00 2.85
392 396 6.777213 TTGTACTCTGTCTTCTATCCCTTC 57.223 41.667 0.00 0.00 0.00 3.46
393 397 7.741554 AATTGTACTCTGTCTTCTATCCCTT 57.258 36.000 0.00 0.00 0.00 3.95
394 398 7.741554 AAATTGTACTCTGTCTTCTATCCCT 57.258 36.000 0.00 0.00 0.00 4.20
395 399 9.886132 TTTAAATTGTACTCTGTCTTCTATCCC 57.114 33.333 0.00 0.00 0.00 3.85
409 413 9.722184 GGAGAGGAAAGTAGTTTAAATTGTACT 57.278 33.333 0.00 0.00 0.00 2.73
410 414 8.944029 GGGAGAGGAAAGTAGTTTAAATTGTAC 58.056 37.037 0.00 0.00 0.00 2.90
411 415 8.887393 AGGGAGAGGAAAGTAGTTTAAATTGTA 58.113 33.333 0.00 0.00 0.00 2.41
412 416 7.756614 AGGGAGAGGAAAGTAGTTTAAATTGT 58.243 34.615 0.00 0.00 0.00 2.71
413 417 9.907229 ATAGGGAGAGGAAAGTAGTTTAAATTG 57.093 33.333 0.00 0.00 0.00 2.32
416 420 9.551339 TGTATAGGGAGAGGAAAGTAGTTTAAA 57.449 33.333 0.00 0.00 0.00 1.52
417 421 9.551339 TTGTATAGGGAGAGGAAAGTAGTTTAA 57.449 33.333 0.00 0.00 0.00 1.52
418 422 8.975295 GTTGTATAGGGAGAGGAAAGTAGTTTA 58.025 37.037 0.00 0.00 0.00 2.01
419 423 7.679025 AGTTGTATAGGGAGAGGAAAGTAGTTT 59.321 37.037 0.00 0.00 0.00 2.66
420 424 7.190501 AGTTGTATAGGGAGAGGAAAGTAGTT 58.809 38.462 0.00 0.00 0.00 2.24
421 425 6.743788 AGTTGTATAGGGAGAGGAAAGTAGT 58.256 40.000 0.00 0.00 0.00 2.73
422 426 7.663043 AAGTTGTATAGGGAGAGGAAAGTAG 57.337 40.000 0.00 0.00 0.00 2.57
423 427 9.364653 GATAAGTTGTATAGGGAGAGGAAAGTA 57.635 37.037 0.00 0.00 0.00 2.24
424 428 7.290481 GGATAAGTTGTATAGGGAGAGGAAAGT 59.710 40.741 0.00 0.00 0.00 2.66
425 429 7.511028 AGGATAAGTTGTATAGGGAGAGGAAAG 59.489 40.741 0.00 0.00 0.00 2.62
426 430 7.371043 AGGATAAGTTGTATAGGGAGAGGAAA 58.629 38.462 0.00 0.00 0.00 3.13
427 431 6.935036 AGGATAAGTTGTATAGGGAGAGGAA 58.065 40.000 0.00 0.00 0.00 3.36
428 432 6.547396 AGGATAAGTTGTATAGGGAGAGGA 57.453 41.667 0.00 0.00 0.00 3.71
429 433 7.728981 TGTTAGGATAAGTTGTATAGGGAGAGG 59.271 40.741 0.00 0.00 0.00 3.69
430 434 8.578151 GTGTTAGGATAAGTTGTATAGGGAGAG 58.422 40.741 0.00 0.00 0.00 3.20
431 435 7.230108 CGTGTTAGGATAAGTTGTATAGGGAGA 59.770 40.741 0.00 0.00 0.00 3.71
432 436 7.230108 TCGTGTTAGGATAAGTTGTATAGGGAG 59.770 40.741 0.00 0.00 0.00 4.30
433 437 7.013655 GTCGTGTTAGGATAAGTTGTATAGGGA 59.986 40.741 0.00 0.00 0.00 4.20
434 438 7.144000 GTCGTGTTAGGATAAGTTGTATAGGG 58.856 42.308 0.00 0.00 0.00 3.53
435 439 7.709947 TGTCGTGTTAGGATAAGTTGTATAGG 58.290 38.462 0.00 0.00 0.00 2.57
436 440 8.618677 TCTGTCGTGTTAGGATAAGTTGTATAG 58.381 37.037 0.00 0.00 0.00 1.31
437 441 8.400947 GTCTGTCGTGTTAGGATAAGTTGTATA 58.599 37.037 0.00 0.00 0.00 1.47
438 442 7.122353 AGTCTGTCGTGTTAGGATAAGTTGTAT 59.878 37.037 0.00 0.00 0.00 2.29
439 443 6.432162 AGTCTGTCGTGTTAGGATAAGTTGTA 59.568 38.462 0.00 0.00 0.00 2.41
440 444 5.243283 AGTCTGTCGTGTTAGGATAAGTTGT 59.757 40.000 0.00 0.00 0.00 3.32
441 445 5.710984 AGTCTGTCGTGTTAGGATAAGTTG 58.289 41.667 0.00 0.00 0.00 3.16
442 446 5.979288 AGTCTGTCGTGTTAGGATAAGTT 57.021 39.130 0.00 0.00 0.00 2.66
443 447 6.827251 TGATAGTCTGTCGTGTTAGGATAAGT 59.173 38.462 0.00 0.00 0.00 2.24
444 448 7.260558 TGATAGTCTGTCGTGTTAGGATAAG 57.739 40.000 0.00 0.00 0.00 1.73
445 449 7.818997 ATGATAGTCTGTCGTGTTAGGATAA 57.181 36.000 0.00 0.00 0.00 1.75
446 450 9.516546 AATATGATAGTCTGTCGTGTTAGGATA 57.483 33.333 1.75 0.00 0.00 2.59
447 451 8.410673 AATATGATAGTCTGTCGTGTTAGGAT 57.589 34.615 1.75 0.00 0.00 3.24
448 452 7.818997 AATATGATAGTCTGTCGTGTTAGGA 57.181 36.000 1.75 0.00 0.00 2.94
449 453 9.776158 GATAATATGATAGTCTGTCGTGTTAGG 57.224 37.037 11.71 0.00 0.00 2.69
450 454 9.479278 CGATAATATGATAGTCTGTCGTGTTAG 57.521 37.037 11.71 0.04 0.00 2.34
451 455 9.211485 TCGATAATATGATAGTCTGTCGTGTTA 57.789 33.333 9.43 9.43 0.00 2.41
452 456 8.016229 GTCGATAATATGATAGTCTGTCGTGTT 58.984 37.037 6.17 6.17 0.00 3.32
453 457 7.388224 AGTCGATAATATGATAGTCTGTCGTGT 59.612 37.037 1.75 0.00 0.00 4.49
454 458 7.744059 AGTCGATAATATGATAGTCTGTCGTG 58.256 38.462 1.75 0.00 0.00 4.35
455 459 7.820386 AGAGTCGATAATATGATAGTCTGTCGT 59.180 37.037 0.00 0.00 0.00 4.34
456 460 8.113675 CAGAGTCGATAATATGATAGTCTGTCG 58.886 40.741 0.00 0.00 0.00 4.35
462 466 8.231161 CGTTGTCAGAGTCGATAATATGATAGT 58.769 37.037 0.00 0.00 0.00 2.12
483 487 1.880027 GGCCTTTCACTGATTCGTTGT 59.120 47.619 0.00 0.00 0.00 3.32
484 488 1.135972 CGGCCTTTCACTGATTCGTTG 60.136 52.381 0.00 0.00 0.00 4.10
492 496 3.366985 GGTAAAAATCCGGCCTTTCACTG 60.367 47.826 0.00 0.00 0.00 3.66
493 497 2.823747 GGTAAAAATCCGGCCTTTCACT 59.176 45.455 0.00 0.00 0.00 3.41
494 498 2.094390 GGGTAAAAATCCGGCCTTTCAC 60.094 50.000 0.00 0.00 0.00 3.18
495 499 2.172679 GGGTAAAAATCCGGCCTTTCA 58.827 47.619 0.00 0.00 0.00 2.69
496 500 2.426024 GAGGGTAAAAATCCGGCCTTTC 59.574 50.000 0.00 0.00 0.00 2.62
498 502 1.639108 AGAGGGTAAAAATCCGGCCTT 59.361 47.619 0.00 0.00 0.00 4.35
499 503 1.296002 AGAGGGTAAAAATCCGGCCT 58.704 50.000 0.00 0.00 0.00 5.19
500 504 2.139323 AAGAGGGTAAAAATCCGGCC 57.861 50.000 0.00 0.00 0.00 6.13
501 505 5.648178 TTAAAAGAGGGTAAAAATCCGGC 57.352 39.130 0.00 0.00 0.00 6.13
502 506 7.597369 CAGTTTTAAAAGAGGGTAAAAATCCGG 59.403 37.037 0.00 0.00 32.52 5.14
503 507 8.139350 ACAGTTTTAAAAGAGGGTAAAAATCCG 58.861 33.333 0.00 0.00 32.52 4.18
504 508 9.256477 CACAGTTTTAAAAGAGGGTAAAAATCC 57.744 33.333 0.00 0.00 32.52 3.01
505 509 8.761497 GCACAGTTTTAAAAGAGGGTAAAAATC 58.239 33.333 0.00 0.00 32.52 2.17
506 510 8.482943 AGCACAGTTTTAAAAGAGGGTAAAAAT 58.517 29.630 0.00 0.00 32.52 1.82
534 593 5.580691 CGCTGGTTGAAGATACAAGTATCAA 59.419 40.000 19.23 6.78 43.27 2.57
549 608 0.320374 CAGTTCCTACCGCTGGTTGA 59.680 55.000 5.57 1.56 37.09 3.18
551 610 0.608640 CTCAGTTCCTACCGCTGGTT 59.391 55.000 5.57 0.00 37.09 3.67
552 611 0.251653 TCTCAGTTCCTACCGCTGGT 60.252 55.000 5.58 5.58 40.16 4.00
558 617 1.273098 TGACCCCTCTCAGTTCCTACC 60.273 57.143 0.00 0.00 0.00 3.18
560 619 2.534042 CTGACCCCTCTCAGTTCCTA 57.466 55.000 0.00 0.00 34.10 2.94
561 620 3.390280 CTGACCCCTCTCAGTTCCT 57.610 57.895 0.00 0.00 34.10 3.36
566 625 1.298014 GGCAACTGACCCCTCTCAG 59.702 63.158 0.00 0.00 43.06 3.35
567 626 1.461268 TGGCAACTGACCCCTCTCA 60.461 57.895 0.00 0.00 37.61 3.27
568 627 1.298014 CTGGCAACTGACCCCTCTC 59.702 63.158 0.00 0.00 37.83 3.20
569 628 1.462238 ACTGGCAACTGACCCCTCT 60.462 57.895 0.00 0.00 39.15 3.69
570 629 1.302832 CACTGGCAACTGACCCCTC 60.303 63.158 0.00 0.00 39.15 4.30
571 630 1.645402 AACACTGGCAACTGACCCCT 61.645 55.000 0.00 0.00 39.15 4.79
572 631 1.152756 AACACTGGCAACTGACCCC 60.153 57.895 0.00 0.00 39.15 4.95
573 632 0.751643 ACAACACTGGCAACTGACCC 60.752 55.000 0.00 0.00 39.15 4.46
574 633 0.663153 GACAACACTGGCAACTGACC 59.337 55.000 0.00 0.00 39.15 4.02
575 634 1.378531 TGACAACACTGGCAACTGAC 58.621 50.000 0.00 0.00 37.77 3.51
576 635 2.121291 TTGACAACACTGGCAACTGA 57.879 45.000 0.00 0.00 46.04 3.41
583 642 7.152645 AGTGTAGTACTAATTGACAACACTGG 58.847 38.462 18.41 0.00 43.30 4.00
589 648 7.652300 CTGCAAGTGTAGTACTAATTGACAA 57.348 36.000 20.05 0.00 39.18 3.18
607 666 0.321021 AGTGCTCAGAGGACTGCAAG 59.679 55.000 22.93 0.00 45.49 4.01
615 674 2.166664 GGTTACCACTAGTGCTCAGAGG 59.833 54.545 17.86 4.45 0.00 3.69
619 678 2.018355 TGGGTTACCACTAGTGCTCA 57.982 50.000 17.86 7.02 43.37 4.26
651 710 3.870633 AGCTAGACGGGTTAACTCTTG 57.129 47.619 3.52 2.60 0.00 3.02
664 723 3.577667 TCGACTCGCTAGATAGCTAGAC 58.422 50.000 19.10 11.51 45.71 2.59
678 737 2.353269 AGCAGATAGAACACTCGACTCG 59.647 50.000 0.00 0.00 0.00 4.18
679 738 3.625764 AGAGCAGATAGAACACTCGACTC 59.374 47.826 0.00 0.00 32.60 3.36
680 739 3.376859 CAGAGCAGATAGAACACTCGACT 59.623 47.826 0.00 0.00 32.60 4.18
681 740 3.375610 TCAGAGCAGATAGAACACTCGAC 59.624 47.826 0.00 0.00 32.60 4.20
682 741 3.610911 TCAGAGCAGATAGAACACTCGA 58.389 45.455 0.00 0.00 32.60 4.04
767 829 2.354821 ACGTTGGACTTTGAGAAACAGC 59.645 45.455 0.00 0.00 0.00 4.40
786 848 1.317611 CTCGATCACGCTTAACACACG 59.682 52.381 0.00 0.00 39.58 4.49
788 850 2.030628 TGTCTCGATCACGCTTAACACA 60.031 45.455 0.00 0.00 39.58 3.72
792 854 3.842732 TTCTGTCTCGATCACGCTTAA 57.157 42.857 0.00 0.00 39.58 1.85
795 857 1.813178 TCTTTCTGTCTCGATCACGCT 59.187 47.619 0.00 0.00 39.58 5.07
809 871 6.093771 CAGAAACTTATCTGCAGCATCTTTCT 59.906 38.462 9.47 13.24 40.31 2.52
891 954 4.423625 GGCTATGTAGTCCAGGTGAATT 57.576 45.455 0.00 0.00 0.00 2.17
908 971 1.410083 GGCACCTGATTGATTGGGCTA 60.410 52.381 0.00 0.00 0.00 3.93
955 1025 2.366916 ACAGTGTAGGCAGCTGGATATC 59.633 50.000 17.12 0.00 34.79 1.63
1005 1086 3.587506 CTGGAGAGGGGTTAAGAAAAGGA 59.412 47.826 0.00 0.00 0.00 3.36
1009 1090 4.240323 AGTTCTGGAGAGGGGTTAAGAAA 58.760 43.478 0.00 0.00 0.00 2.52
1060 1144 4.282957 CACTGTGGGAGCTATGATGAGTAT 59.717 45.833 0.00 0.00 0.00 2.12
1123 1207 1.000019 TCGGAGGAAGACGGATGGT 60.000 57.895 0.00 0.00 0.00 3.55
1157 1241 2.981784 AGGTGCAGATGCCCTATGATTA 59.018 45.455 11.65 0.00 39.06 1.75
1232 1316 1.451028 GAGCTGCAGGTGGATGACC 60.451 63.158 25.60 2.56 46.58 4.02
1257 1342 3.969250 AAACCACGATGGCCGCGAT 62.969 57.895 22.54 0.00 42.67 4.58
1370 1455 1.164041 AAAACGACTTGCAGACCGGG 61.164 55.000 6.32 0.00 0.00 5.73
1371 1456 0.661020 AAAAACGACTTGCAGACCGG 59.339 50.000 0.00 0.00 0.00 5.28
1373 1458 3.692791 AAGAAAAACGACTTGCAGACC 57.307 42.857 0.00 0.00 0.00 3.85
1374 1459 4.658071 TCAAAGAAAAACGACTTGCAGAC 58.342 39.130 0.00 0.00 0.00 3.51
1375 1460 4.955925 TCAAAGAAAAACGACTTGCAGA 57.044 36.364 0.00 0.00 0.00 4.26
1378 1463 5.755330 TGTTTCAAAGAAAAACGACTTGC 57.245 34.783 0.00 0.00 39.04 4.01
1454 1683 6.716898 AGTATGCAACTTTCTTTACGTACC 57.283 37.500 0.00 0.00 33.35 3.34
1458 1687 8.014322 TGAGTTAGTATGCAACTTTCTTTACG 57.986 34.615 6.82 0.00 39.80 3.18
1549 1882 1.742831 GCGATGTCTTGTTGGCCATAA 59.257 47.619 6.09 4.29 0.00 1.90
1552 1885 2.324330 CGCGATGTCTTGTTGGCCA 61.324 57.895 0.00 0.00 0.00 5.36
1606 1939 2.162608 GAGCTCTGAGACGAACAGCTTA 59.837 50.000 9.28 0.00 35.61 3.09
1724 2057 1.006571 TCTCGTTGAGGTTGACGGC 60.007 57.895 0.00 0.00 39.59 5.68
1819 2152 1.529010 CACCTGCTGGAACTTGGCA 60.529 57.895 17.64 0.00 37.04 4.92
1870 2203 1.453155 GGAAGAAATCCTGCGCAGAA 58.547 50.000 38.06 21.60 45.56 3.02
1882 2215 1.302192 CGGCAAGGTCGGGAAGAAA 60.302 57.895 0.00 0.00 0.00 2.52
1892 2225 4.473520 CCGGCTCATCGGCAAGGT 62.474 66.667 0.00 0.00 43.71 3.50
1939 2272 3.614568 AGGAATATCCTCTGGTACCGT 57.385 47.619 7.57 0.00 45.66 4.83
1972 2305 3.877508 GGCTAAGCACCATTTCGAAGTAT 59.122 43.478 0.00 0.00 0.00 2.12
2066 2399 0.821711 TTTGTGACCTTCCCTTGCCG 60.822 55.000 0.00 0.00 0.00 5.69
2182 2709 9.184523 CCTGATTAAAAGTATATGGAACCACAA 57.815 33.333 0.00 0.00 0.00 3.33
2196 2723 7.285401 ACCGATAAATGCATCCTGATTAAAAGT 59.715 33.333 0.00 0.00 0.00 2.66
2261 2793 3.452474 CGGGTTCTTGATTAGCTCAGAG 58.548 50.000 0.00 0.00 34.68 3.35
2325 2857 1.860950 CACCAGTCTCTGTTTGACACG 59.139 52.381 0.00 0.00 36.94 4.49
2327 2859 1.209261 TGCACCAGTCTCTGTTTGACA 59.791 47.619 0.00 0.00 36.94 3.58
2329 2861 1.202687 CCTGCACCAGTCTCTGTTTGA 60.203 52.381 0.00 0.00 0.00 2.69
2362 2894 6.465084 ACCATCTTCAGGTAGTTGAGTTTAC 58.535 40.000 0.00 0.00 37.67 2.01
2477 3009 2.534042 AGATCCTTGTCTTCGAGGGA 57.466 50.000 0.00 0.00 43.63 4.20
2481 3013 4.600692 TCACAAAGATCCTTGTCTTCGA 57.399 40.909 6.73 0.00 37.43 3.71
2504 3036 0.986019 CCCTACCCATAGCCCACACA 60.986 60.000 0.00 0.00 0.00 3.72
2519 3051 2.688666 CAGCAGGCAGGGTCCCTA 60.689 66.667 11.12 0.00 29.64 3.53
2542 3074 1.066358 CCGGGTAAAACTCCTCAGGTC 60.066 57.143 0.00 0.00 0.00 3.85
2573 3105 4.375272 CATAGAAATCAGTGTCGATGCCT 58.625 43.478 0.00 0.00 0.00 4.75
2720 3252 1.005394 TTCTTTCCTCACGCCGTCC 60.005 57.895 0.00 0.00 0.00 4.79
2727 3259 3.650139 TGCTTACGTCTTCTTTCCTCAC 58.350 45.455 0.00 0.00 0.00 3.51
2744 3276 1.000396 GCCAGTCCCTTCCATGCTT 60.000 57.895 0.00 0.00 0.00 3.91
2806 3338 6.677781 TCATGCTTTAGCCAGTATAAACAC 57.322 37.500 0.00 0.00 41.18 3.32
2841 3373 9.927668 CCATTAGAAAATACAAGATGTGGTTTT 57.072 29.630 7.62 7.62 34.52 2.43
2920 3452 5.976534 GTGAAAACATGCATGTGACAACTTA 59.023 36.000 31.98 11.13 41.61 2.24
3057 3596 4.143116 GCAAAAGCACATTATTGCAAACG 58.857 39.130 1.71 0.00 45.61 3.60
3088 3627 5.343325 GCAACAATAGACTTTTACAAGCTGC 59.657 40.000 0.00 0.00 32.57 5.25
3144 3683 8.312669 AGCTACAATCTGAAGAACCTAGTTAT 57.687 34.615 0.00 0.00 0.00 1.89
3150 3689 6.360370 TGTAAGCTACAATCTGAAGAACCT 57.640 37.500 0.00 0.00 35.38 3.50
3242 3793 1.134946 GCAACAGTGGTGAAAAGCTGT 59.865 47.619 13.73 0.00 43.13 4.40
3244 3795 0.746659 GGCAACAGTGGTGAAAAGCT 59.253 50.000 13.73 0.00 0.00 3.74
3245 3796 0.594796 CGGCAACAGTGGTGAAAAGC 60.595 55.000 13.73 0.00 0.00 3.51
3246 3797 0.594796 GCGGCAACAGTGGTGAAAAG 60.595 55.000 13.73 0.13 0.00 2.27
3247 3798 1.435515 GCGGCAACAGTGGTGAAAA 59.564 52.632 13.73 0.00 0.00 2.29
3248 3799 2.485795 GGCGGCAACAGTGGTGAAA 61.486 57.895 13.73 0.00 0.00 2.69
3249 3800 2.904866 GGCGGCAACAGTGGTGAA 60.905 61.111 13.73 0.00 0.00 3.18
3250 3801 3.825160 GAGGCGGCAACAGTGGTGA 62.825 63.158 13.73 0.00 0.00 4.02
3251 3802 3.357079 GAGGCGGCAACAGTGGTG 61.357 66.667 13.08 2.98 0.00 4.17
3252 3803 3.120086 AAGAGGCGGCAACAGTGGT 62.120 57.895 13.08 0.00 0.00 4.16
3340 3891 7.383156 AGCATAAATCCATCCATCCATTTTT 57.617 32.000 0.00 0.00 0.00 1.94
3341 3892 7.221450 CAAGCATAAATCCATCCATCCATTTT 58.779 34.615 0.00 0.00 0.00 1.82
3431 3987 6.586344 TCAATCAACTCATCTAAGCCCTAAG 58.414 40.000 0.00 0.00 0.00 2.18
3515 4071 3.871006 TCGAGTGCACAATAACATCCATC 59.129 43.478 21.04 1.79 0.00 3.51
3528 4084 2.408050 AGAGTTGTGAATCGAGTGCAC 58.592 47.619 9.40 9.40 0.00 4.57
3564 4120 8.640651 AGATGCTAGCTATACCAATAGATGATG 58.359 37.037 17.23 0.00 37.84 3.07
3576 4132 3.513515 AGGCCTCAAGATGCTAGCTATAC 59.486 47.826 17.23 4.73 0.00 1.47
3581 4137 0.467384 TGAGGCCTCAAGATGCTAGC 59.533 55.000 33.41 8.10 36.53 3.42
3582 4138 2.996249 TTGAGGCCTCAAGATGCTAG 57.004 50.000 38.69 0.00 43.90 3.42
3604 4429 3.981071 TCCCCTTCTGTGTAGATTGTG 57.019 47.619 0.00 0.00 31.81 3.33
3614 4439 2.885388 AGATCCAGATCCCCTTCTGT 57.115 50.000 4.01 0.00 41.30 3.41
3624 4449 9.084533 GTCAAGTAGGTTTAGATAGATCCAGAT 57.915 37.037 0.00 0.00 0.00 2.90
3625 4450 8.282982 AGTCAAGTAGGTTTAGATAGATCCAGA 58.717 37.037 0.00 0.00 0.00 3.86
3627 4452 8.840200 AAGTCAAGTAGGTTTAGATAGATCCA 57.160 34.615 0.00 0.00 0.00 3.41
3628 4453 9.752961 GAAAGTCAAGTAGGTTTAGATAGATCC 57.247 37.037 0.00 0.00 0.00 3.36
3637 4471 9.720769 CAAGGAATAGAAAGTCAAGTAGGTTTA 57.279 33.333 0.00 0.00 0.00 2.01
3639 4473 7.661847 CACAAGGAATAGAAAGTCAAGTAGGTT 59.338 37.037 0.00 0.00 0.00 3.50
3641 4475 7.162082 ACACAAGGAATAGAAAGTCAAGTAGG 58.838 38.462 0.00 0.00 0.00 3.18
3674 4508 5.096954 CGACATATCGTCATACACTGAGT 57.903 43.478 0.00 0.00 45.70 3.41
3688 4522 7.492669 TCTTGAGTCTTGATTTTCCGACATATC 59.507 37.037 0.00 0.00 0.00 1.63
3701 4535 7.550597 TCATATAGCCATCTTGAGTCTTGAT 57.449 36.000 0.00 0.00 0.00 2.57
3772 4606 7.708752 CCTACAATTTCTTGCACCTGTTAAAAA 59.291 33.333 0.00 0.00 35.69 1.94
3773 4607 7.068839 TCCTACAATTTCTTGCACCTGTTAAAA 59.931 33.333 0.00 0.00 35.69 1.52
3774 4608 6.547880 TCCTACAATTTCTTGCACCTGTTAAA 59.452 34.615 0.00 0.00 35.69 1.52
3775 4609 6.065374 TCCTACAATTTCTTGCACCTGTTAA 58.935 36.000 0.00 0.00 35.69 2.01
3776 4610 5.626142 TCCTACAATTTCTTGCACCTGTTA 58.374 37.500 0.00 0.00 35.69 2.41
3777 4611 4.469657 TCCTACAATTTCTTGCACCTGTT 58.530 39.130 0.00 0.00 35.69 3.16
3778 4612 4.098914 TCCTACAATTTCTTGCACCTGT 57.901 40.909 0.00 0.00 35.69 4.00
3779 4613 5.452078 TTTCCTACAATTTCTTGCACCTG 57.548 39.130 0.00 0.00 35.69 4.00
3780 4614 5.011023 CCTTTTCCTACAATTTCTTGCACCT 59.989 40.000 0.00 0.00 35.69 4.00
3781 4615 5.221441 ACCTTTTCCTACAATTTCTTGCACC 60.221 40.000 0.00 0.00 35.69 5.01
3782 4616 5.842907 ACCTTTTCCTACAATTTCTTGCAC 58.157 37.500 0.00 0.00 35.69 4.57
3783 4617 6.279882 CAACCTTTTCCTACAATTTCTTGCA 58.720 36.000 0.00 0.00 35.69 4.08
3784 4618 5.696270 CCAACCTTTTCCTACAATTTCTTGC 59.304 40.000 0.00 0.00 35.69 4.01
3785 4619 7.049799 TCCAACCTTTTCCTACAATTTCTTG 57.950 36.000 0.00 0.00 38.39 3.02
3786 4620 7.669089 TTCCAACCTTTTCCTACAATTTCTT 57.331 32.000 0.00 0.00 0.00 2.52
3787 4621 7.669089 TTTCCAACCTTTTCCTACAATTTCT 57.331 32.000 0.00 0.00 0.00 2.52
3788 4622 8.725405 TTTTTCCAACCTTTTCCTACAATTTC 57.275 30.769 0.00 0.00 0.00 2.17
3789 4623 8.544622 TCTTTTTCCAACCTTTTCCTACAATTT 58.455 29.630 0.00 0.00 0.00 1.82
3790 4624 8.084985 TCTTTTTCCAACCTTTTCCTACAATT 57.915 30.769 0.00 0.00 0.00 2.32
3791 4625 7.669089 TCTTTTTCCAACCTTTTCCTACAAT 57.331 32.000 0.00 0.00 0.00 2.71
3792 4626 7.418483 CCATCTTTTTCCAACCTTTTCCTACAA 60.418 37.037 0.00 0.00 0.00 2.41
3793 4627 6.041523 CCATCTTTTTCCAACCTTTTCCTACA 59.958 38.462 0.00 0.00 0.00 2.74
3794 4628 6.266786 TCCATCTTTTTCCAACCTTTTCCTAC 59.733 38.462 0.00 0.00 0.00 3.18
3795 4629 6.377912 TCCATCTTTTTCCAACCTTTTCCTA 58.622 36.000 0.00 0.00 0.00 2.94
3796 4630 5.215845 TCCATCTTTTTCCAACCTTTTCCT 58.784 37.500 0.00 0.00 0.00 3.36
3797 4631 5.545063 TCCATCTTTTTCCAACCTTTTCC 57.455 39.130 0.00 0.00 0.00 3.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.