Multiple sequence alignment - TraesCS7D01G135300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G135300 chr7D 100.000 4255 0 0 1 4255 86801472 86797218 0 7858
1 TraesCS7D01G135300 chr7D 91.863 3773 224 38 536 4255 86924515 86920773 0 5190
2 TraesCS7D01G135300 chr7D 90.724 3838 279 42 472 4255 87212499 87208685 0 5044
3 TraesCS7D01G135300 chr7D 91.651 3617 237 27 472 4045 86768555 86764961 0 4946
4 TraesCS7D01G135300 chr7D 89.366 2050 169 26 472 2491 86927329 86925299 0 2532
5 TraesCS7D01G135300 chr7D 85.879 1990 230 26 480 2428 86298337 86296358 0 2071
6 TraesCS7D01G135300 chr7D 96.226 477 18 0 1 477 475695347 475694871 0 782
7 TraesCS7D01G135300 chr7B 91.682 3835 242 26 475 4255 35313627 35309816 0 5243
8 TraesCS7D01G135300 chr7B 90.925 2876 205 22 472 3312 35513326 35510472 0 3814
9 TraesCS7D01G135300 chr7B 82.162 2091 280 49 472 2519 35257356 35255316 0 1709
10 TraesCS7D01G135300 chr7B 90.781 922 77 7 3336 4255 35510394 35509479 0 1225
11 TraesCS7D01G135300 chr7A 90.071 3827 298 39 475 4255 88014401 88010611 0 4887
12 TraesCS7D01G135300 chr7A 89.838 3838 306 48 472 4255 88441929 88438122 0 4850
13 TraesCS7D01G135300 chr7A 89.804 3825 307 40 475 4253 88127680 88123893 0 4826
14 TraesCS7D01G135300 chr7A 88.863 3825 326 40 475 4255 88178427 88174659 0 4612
15 TraesCS7D01G135300 chr7A 95.289 2547 96 5 810 3336 87456919 87454377 0 4017
16 TraesCS7D01G135300 chr7A 89.057 2175 199 25 472 2625 88323727 88321571 0 2662
17 TraesCS7D01G135300 chr7A 96.100 923 30 3 3336 4255 87454347 87453428 0 1500
18 TraesCS7D01G135300 chr6D 96.436 477 17 0 1 477 351728831 351728355 0 787
19 TraesCS7D01G135300 chr6D 96.226 477 18 0 1 477 431835442 431834966 0 782
20 TraesCS7D01G135300 chr5D 96.815 471 15 0 1 471 58651405 58651875 0 787
21 TraesCS7D01G135300 chr5D 96.603 471 15 1 1 471 14228025 14228494 0 780
22 TraesCS7D01G135300 chr4D 96.603 471 16 0 1 471 386647772 386648242 0 782
23 TraesCS7D01G135300 chr3D 96.603 471 16 0 1 471 336567683 336568153 0 782
24 TraesCS7D01G135300 chr3D 96.603 471 16 0 1 471 424901547 424902017 0 782
25 TraesCS7D01G135300 chr2D 96.226 477 17 1 1 477 280627245 280627720 0 780


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G135300 chr7D 86797218 86801472 4254 True 7858.0 7858 100.0000 1 4255 1 chr7D.!!$R3 4254
1 TraesCS7D01G135300 chr7D 87208685 87212499 3814 True 5044.0 5044 90.7240 472 4255 1 chr7D.!!$R4 3783
2 TraesCS7D01G135300 chr7D 86764961 86768555 3594 True 4946.0 4946 91.6510 472 4045 1 chr7D.!!$R2 3573
3 TraesCS7D01G135300 chr7D 86920773 86927329 6556 True 3861.0 5190 90.6145 472 4255 2 chr7D.!!$R6 3783
4 TraesCS7D01G135300 chr7D 86296358 86298337 1979 True 2071.0 2071 85.8790 480 2428 1 chr7D.!!$R1 1948
5 TraesCS7D01G135300 chr7B 35309816 35313627 3811 True 5243.0 5243 91.6820 475 4255 1 chr7B.!!$R2 3780
6 TraesCS7D01G135300 chr7B 35509479 35513326 3847 True 2519.5 3814 90.8530 472 4255 2 chr7B.!!$R3 3783
7 TraesCS7D01G135300 chr7B 35255316 35257356 2040 True 1709.0 1709 82.1620 472 2519 1 chr7B.!!$R1 2047
8 TraesCS7D01G135300 chr7A 88010611 88014401 3790 True 4887.0 4887 90.0710 475 4255 1 chr7A.!!$R1 3780
9 TraesCS7D01G135300 chr7A 88438122 88441929 3807 True 4850.0 4850 89.8380 472 4255 1 chr7A.!!$R5 3783
10 TraesCS7D01G135300 chr7A 88123893 88127680 3787 True 4826.0 4826 89.8040 475 4253 1 chr7A.!!$R2 3778
11 TraesCS7D01G135300 chr7A 88174659 88178427 3768 True 4612.0 4612 88.8630 475 4255 1 chr7A.!!$R3 3780
12 TraesCS7D01G135300 chr7A 87453428 87456919 3491 True 2758.5 4017 95.6945 810 4255 2 chr7A.!!$R6 3445
13 TraesCS7D01G135300 chr7A 88321571 88323727 2156 True 2662.0 2662 89.0570 472 2625 1 chr7A.!!$R4 2153

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
383 384 0.032952 CGGAACACTGGAGACCGAAA 59.967 55.000 0.00 0.00 45.31 3.46 F
645 670 0.861837 CATATTTGAGAGCGGCGGAC 59.138 55.000 9.78 0.00 0.00 4.79 F
660 685 0.874390 CGGACACCATGGTTTGAGTG 59.126 55.000 16.84 5.32 34.54 3.51 F
1895 4712 0.455815 GGGCGGCCTTGTTAATGAAG 59.544 55.000 22.87 0.00 0.00 3.02 F
1999 4834 1.682684 GAAGACGGAGGAGGCTCCA 60.683 63.158 33.86 0.00 43.49 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1332 4124 0.178831 AACATTGGTCCCCTCCCTCT 60.179 55.000 0.00 0.0 0.00 3.69 R
1547 4352 2.232452 CCGTGATCCTCATATCCTCCAC 59.768 54.545 0.00 0.0 0.00 4.02 R
1914 4731 2.702478 TCATCCATGGTCATCTCCTCAC 59.298 50.000 12.58 0.0 0.00 3.51 R
2747 5632 0.872388 GTTTTTCCAGTCGCCACGAT 59.128 50.000 0.00 0.0 38.42 3.73 R
3968 6934 0.544833 TGCCAATTGTGCCCCTGATT 60.545 50.000 13.99 0.0 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.363744 GAGATCAAGGTGTCAAGCCG 58.636 55.000 0.00 0.00 0.00 5.52
20 21 0.036010 AGATCAAGGTGTCAAGCCGG 60.036 55.000 0.00 0.00 0.00 6.13
21 22 0.321653 GATCAAGGTGTCAAGCCGGT 60.322 55.000 1.90 0.00 0.00 5.28
22 23 0.606401 ATCAAGGTGTCAAGCCGGTG 60.606 55.000 1.90 0.00 0.00 4.94
23 24 1.227823 CAAGGTGTCAAGCCGGTGA 60.228 57.895 1.90 0.00 0.00 4.02
24 25 1.227853 AAGGTGTCAAGCCGGTGAC 60.228 57.895 16.31 16.31 46.74 3.67
40 41 3.309388 GGTGACGATGGAGATTATGACG 58.691 50.000 0.00 0.00 0.00 4.35
41 42 3.309388 GTGACGATGGAGATTATGACGG 58.691 50.000 0.00 0.00 0.00 4.79
42 43 2.956333 TGACGATGGAGATTATGACGGT 59.044 45.455 0.00 0.00 0.00 4.83
43 44 3.243401 TGACGATGGAGATTATGACGGTG 60.243 47.826 0.00 0.00 0.00 4.94
44 45 2.061773 CGATGGAGATTATGACGGTGC 58.938 52.381 0.00 0.00 0.00 5.01
45 46 2.288457 CGATGGAGATTATGACGGTGCT 60.288 50.000 0.00 0.00 0.00 4.40
46 47 3.733337 GATGGAGATTATGACGGTGCTT 58.267 45.455 0.00 0.00 0.00 3.91
47 48 3.627395 TGGAGATTATGACGGTGCTTT 57.373 42.857 0.00 0.00 0.00 3.51
48 49 3.270027 TGGAGATTATGACGGTGCTTTG 58.730 45.455 0.00 0.00 0.00 2.77
49 50 2.614057 GGAGATTATGACGGTGCTTTGG 59.386 50.000 0.00 0.00 0.00 3.28
50 51 3.531538 GAGATTATGACGGTGCTTTGGA 58.468 45.455 0.00 0.00 0.00 3.53
51 52 3.535561 AGATTATGACGGTGCTTTGGAG 58.464 45.455 0.00 0.00 0.00 3.86
52 53 3.197766 AGATTATGACGGTGCTTTGGAGA 59.802 43.478 0.00 0.00 0.00 3.71
53 54 3.627395 TTATGACGGTGCTTTGGAGAT 57.373 42.857 0.00 0.00 0.00 2.75
54 55 1.742761 ATGACGGTGCTTTGGAGATG 58.257 50.000 0.00 0.00 0.00 2.90
55 56 0.321564 TGACGGTGCTTTGGAGATGG 60.322 55.000 0.00 0.00 0.00 3.51
56 57 0.036388 GACGGTGCTTTGGAGATGGA 60.036 55.000 0.00 0.00 0.00 3.41
57 58 0.036010 ACGGTGCTTTGGAGATGGAG 60.036 55.000 0.00 0.00 0.00 3.86
58 59 0.250234 CGGTGCTTTGGAGATGGAGA 59.750 55.000 0.00 0.00 0.00 3.71
59 60 1.134280 CGGTGCTTTGGAGATGGAGAT 60.134 52.381 0.00 0.00 0.00 2.75
60 61 2.570135 GGTGCTTTGGAGATGGAGATC 58.430 52.381 0.00 0.00 0.00 2.75
61 62 2.092753 GGTGCTTTGGAGATGGAGATCA 60.093 50.000 0.00 0.00 0.00 2.92
62 63 3.614092 GTGCTTTGGAGATGGAGATCAA 58.386 45.455 0.00 0.00 0.00 2.57
63 64 4.012374 GTGCTTTGGAGATGGAGATCAAA 58.988 43.478 0.00 0.00 0.00 2.69
64 65 4.096081 GTGCTTTGGAGATGGAGATCAAAG 59.904 45.833 0.00 0.00 43.95 2.77
65 66 3.631227 GCTTTGGAGATGGAGATCAAAGG 59.369 47.826 13.59 0.00 42.40 3.11
66 67 3.287867 TTGGAGATGGAGATCAAAGGC 57.712 47.619 0.00 0.00 0.00 4.35
67 68 2.199208 TGGAGATGGAGATCAAAGGCA 58.801 47.619 0.00 0.00 0.00 4.75
68 69 2.092753 TGGAGATGGAGATCAAAGGCAC 60.093 50.000 0.00 0.00 0.00 5.01
69 70 2.092753 GGAGATGGAGATCAAAGGCACA 60.093 50.000 0.00 0.00 0.00 4.57
70 71 3.614092 GAGATGGAGATCAAAGGCACAA 58.386 45.455 0.00 0.00 0.00 3.33
71 72 3.618351 AGATGGAGATCAAAGGCACAAG 58.382 45.455 0.00 0.00 0.00 3.16
72 73 3.265221 AGATGGAGATCAAAGGCACAAGA 59.735 43.478 0.00 0.00 0.00 3.02
73 74 3.726557 TGGAGATCAAAGGCACAAGAT 57.273 42.857 0.00 0.00 0.00 2.40
74 75 3.349927 TGGAGATCAAAGGCACAAGATG 58.650 45.455 0.00 0.00 0.00 2.90
75 76 3.009363 TGGAGATCAAAGGCACAAGATGA 59.991 43.478 0.00 0.00 0.00 2.92
76 77 4.205587 GGAGATCAAAGGCACAAGATGAT 58.794 43.478 0.00 0.00 33.64 2.45
77 78 4.036498 GGAGATCAAAGGCACAAGATGATG 59.964 45.833 0.00 0.00 31.24 3.07
78 79 4.851843 AGATCAAAGGCACAAGATGATGA 58.148 39.130 0.00 0.00 31.24 2.92
79 80 5.446860 AGATCAAAGGCACAAGATGATGAT 58.553 37.500 0.00 0.00 31.24 2.45
80 81 4.976224 TCAAAGGCACAAGATGATGATG 57.024 40.909 0.00 0.00 0.00 3.07
81 82 3.697542 TCAAAGGCACAAGATGATGATGG 59.302 43.478 0.00 0.00 0.00 3.51
82 83 1.688772 AGGCACAAGATGATGATGGC 58.311 50.000 0.00 0.00 36.17 4.40
83 84 0.672342 GGCACAAGATGATGATGGCC 59.328 55.000 0.00 0.00 0.00 5.36
84 85 1.395635 GCACAAGATGATGATGGCCA 58.604 50.000 8.56 8.56 0.00 5.36
85 86 1.961394 GCACAAGATGATGATGGCCAT 59.039 47.619 20.96 20.96 38.43 4.40
86 87 3.151554 GCACAAGATGATGATGGCCATA 58.848 45.455 20.84 2.55 35.17 2.74
87 88 3.762288 GCACAAGATGATGATGGCCATAT 59.238 43.478 20.84 8.56 35.17 1.78
88 89 4.142447 GCACAAGATGATGATGGCCATATC 60.142 45.833 20.84 17.70 35.17 1.63
89 90 5.007682 CACAAGATGATGATGGCCATATCA 58.992 41.667 26.38 26.38 41.00 2.15
91 92 5.652452 ACAAGATGATGATGGCCATATCATG 59.348 40.000 32.79 27.71 45.30 3.07
92 93 5.452341 AGATGATGATGGCCATATCATGT 57.548 39.130 32.79 29.12 45.30 3.21
93 94 5.437946 AGATGATGATGGCCATATCATGTC 58.562 41.667 32.79 25.73 45.30 3.06
94 95 4.644163 TGATGATGGCCATATCATGTCA 57.356 40.909 23.53 15.38 45.30 3.58
95 96 4.329392 TGATGATGGCCATATCATGTCAC 58.671 43.478 23.53 11.42 45.30 3.67
96 97 3.860968 TGATGGCCATATCATGTCACA 57.139 42.857 20.84 6.00 32.39 3.58
97 98 4.376225 TGATGGCCATATCATGTCACAT 57.624 40.909 20.84 0.00 32.39 3.21
98 99 5.502089 TGATGGCCATATCATGTCACATA 57.498 39.130 20.84 0.00 32.39 2.29
99 100 6.069705 TGATGGCCATATCATGTCACATAT 57.930 37.500 20.84 0.00 32.39 1.78
100 101 6.486941 TGATGGCCATATCATGTCACATATT 58.513 36.000 20.84 0.00 32.39 1.28
101 102 6.949463 TGATGGCCATATCATGTCACATATTT 59.051 34.615 20.84 0.00 32.39 1.40
102 103 7.452189 TGATGGCCATATCATGTCACATATTTT 59.548 33.333 20.84 0.00 32.39 1.82
103 104 6.983984 TGGCCATATCATGTCACATATTTTG 58.016 36.000 0.00 0.00 0.00 2.44
104 105 6.776603 TGGCCATATCATGTCACATATTTTGA 59.223 34.615 0.00 0.00 0.00 2.69
105 106 7.452189 TGGCCATATCATGTCACATATTTTGAT 59.548 33.333 0.00 0.00 0.00 2.57
106 107 8.308931 GGCCATATCATGTCACATATTTTGATT 58.691 33.333 0.00 0.00 0.00 2.57
107 108 9.135843 GCCATATCATGTCACATATTTTGATTG 57.864 33.333 0.00 0.00 0.00 2.67
108 109 9.135843 CCATATCATGTCACATATTTTGATTGC 57.864 33.333 0.00 0.00 0.00 3.56
109 110 9.685828 CATATCATGTCACATATTTTGATTGCA 57.314 29.630 0.00 0.00 0.00 4.08
111 112 7.995463 TCATGTCACATATTTTGATTGCATG 57.005 32.000 0.00 0.00 33.47 4.06
112 113 7.548967 TCATGTCACATATTTTGATTGCATGT 58.451 30.769 0.00 0.00 33.78 3.21
113 114 7.489757 TCATGTCACATATTTTGATTGCATGTG 59.510 33.333 5.19 5.19 44.95 3.21
116 117 7.995463 TCACATATTTTGATTGCATGTGATG 57.005 32.000 9.32 0.00 46.34 3.07
117 118 7.548967 TCACATATTTTGATTGCATGTGATGT 58.451 30.769 9.32 0.00 46.34 3.06
118 119 8.035984 TCACATATTTTGATTGCATGTGATGTT 58.964 29.630 9.32 0.00 46.34 2.71
119 120 8.661257 CACATATTTTGATTGCATGTGATGTTT 58.339 29.630 5.56 0.00 45.95 2.83
120 121 9.872721 ACATATTTTGATTGCATGTGATGTTTA 57.127 25.926 0.00 0.00 0.00 2.01
150 151 5.984233 TGCATCCTATTTTGCTTAGTACG 57.016 39.130 0.00 0.00 39.60 3.67
151 152 4.814234 TGCATCCTATTTTGCTTAGTACGG 59.186 41.667 0.00 0.00 39.60 4.02
152 153 4.319549 GCATCCTATTTTGCTTAGTACGGC 60.320 45.833 0.00 2.43 35.95 5.68
153 154 3.450578 TCCTATTTTGCTTAGTACGGCG 58.549 45.455 4.80 4.80 0.00 6.46
154 155 2.542595 CCTATTTTGCTTAGTACGGCGG 59.457 50.000 13.24 0.00 0.00 6.13
155 156 2.103537 ATTTTGCTTAGTACGGCGGT 57.896 45.000 13.24 1.39 0.00 5.68
156 157 2.739885 TTTTGCTTAGTACGGCGGTA 57.260 45.000 13.24 0.00 0.00 4.02
157 158 2.282701 TTTGCTTAGTACGGCGGTAG 57.717 50.000 13.24 1.66 0.00 3.18
158 159 0.179129 TTGCTTAGTACGGCGGTAGC 60.179 55.000 13.24 12.41 44.18 3.58
173 174 5.975410 GCGGTAGCATTATAAGATGATCC 57.025 43.478 0.00 0.00 44.35 3.36
174 175 4.811557 GCGGTAGCATTATAAGATGATCCC 59.188 45.833 0.00 0.00 44.35 3.85
175 176 5.395768 GCGGTAGCATTATAAGATGATCCCT 60.396 44.000 0.00 0.00 44.35 4.20
176 177 6.644347 CGGTAGCATTATAAGATGATCCCTT 58.356 40.000 0.00 0.00 0.00 3.95
177 178 7.632898 GCGGTAGCATTATAAGATGATCCCTTA 60.633 40.741 7.01 7.01 44.35 2.69
178 179 7.707035 CGGTAGCATTATAAGATGATCCCTTAC 59.293 40.741 6.77 0.00 0.00 2.34
179 180 8.763601 GGTAGCATTATAAGATGATCCCTTACT 58.236 37.037 6.77 3.49 0.00 2.24
191 192 9.413734 AGATGATCCCTTACTAAAATTTCAAGG 57.586 33.333 11.25 11.25 36.36 3.61
192 193 9.190317 GATGATCCCTTACTAAAATTTCAAGGT 57.810 33.333 14.66 5.74 35.08 3.50
206 207 7.939784 AATTTCAAGGTATAAGTGTTCTCCC 57.060 36.000 0.00 0.00 0.00 4.30
207 208 6.697641 TTTCAAGGTATAAGTGTTCTCCCT 57.302 37.500 0.00 0.00 0.00 4.20
208 209 5.677319 TCAAGGTATAAGTGTTCTCCCTG 57.323 43.478 0.00 0.00 0.00 4.45
209 210 5.338632 TCAAGGTATAAGTGTTCTCCCTGA 58.661 41.667 0.00 0.00 0.00 3.86
210 211 5.422331 TCAAGGTATAAGTGTTCTCCCTGAG 59.578 44.000 0.00 0.00 0.00 3.35
211 212 4.949121 AGGTATAAGTGTTCTCCCTGAGT 58.051 43.478 0.00 0.00 0.00 3.41
212 213 6.088541 AGGTATAAGTGTTCTCCCTGAGTA 57.911 41.667 0.00 0.00 0.00 2.59
213 214 6.684538 AGGTATAAGTGTTCTCCCTGAGTAT 58.315 40.000 0.00 0.00 0.00 2.12
214 215 6.551601 AGGTATAAGTGTTCTCCCTGAGTATG 59.448 42.308 0.00 0.00 0.00 2.39
215 216 3.618690 AAGTGTTCTCCCTGAGTATGC 57.381 47.619 0.00 0.00 0.00 3.14
216 217 2.540383 AGTGTTCTCCCTGAGTATGCA 58.460 47.619 0.00 0.00 0.00 3.96
217 218 2.234908 AGTGTTCTCCCTGAGTATGCAC 59.765 50.000 0.00 0.00 0.00 4.57
218 219 1.555075 TGTTCTCCCTGAGTATGCACC 59.445 52.381 0.00 0.00 0.00 5.01
219 220 0.824109 TTCTCCCTGAGTATGCACCG 59.176 55.000 0.00 0.00 0.00 4.94
220 221 0.324368 TCTCCCTGAGTATGCACCGT 60.324 55.000 0.00 0.00 0.00 4.83
221 222 0.537188 CTCCCTGAGTATGCACCGTT 59.463 55.000 0.00 0.00 0.00 4.44
222 223 0.249120 TCCCTGAGTATGCACCGTTG 59.751 55.000 0.00 0.00 0.00 4.10
231 232 2.713154 GCACCGTTGCGACAGTTT 59.287 55.556 4.64 0.00 39.50 2.66
232 233 1.654137 GCACCGTTGCGACAGTTTG 60.654 57.895 4.64 0.00 39.50 2.93
233 234 1.719117 CACCGTTGCGACAGTTTGT 59.281 52.632 4.64 0.00 0.00 2.83
234 235 0.315869 CACCGTTGCGACAGTTTGTC 60.316 55.000 4.64 0.00 43.65 3.18
241 242 4.021650 GACAGTTTGTCGTGCCGA 57.978 55.556 0.00 0.00 37.67 5.54
242 243 1.853319 GACAGTTTGTCGTGCCGAG 59.147 57.895 0.00 0.00 37.67 4.63
243 244 0.596600 GACAGTTTGTCGTGCCGAGA 60.597 55.000 0.00 0.00 37.67 4.04
244 245 0.874607 ACAGTTTGTCGTGCCGAGAC 60.875 55.000 0.00 0.00 36.23 3.36
245 246 0.874175 CAGTTTGTCGTGCCGAGACA 60.874 55.000 2.46 2.46 45.68 3.41
246 247 0.874607 AGTTTGTCGTGCCGAGACAC 60.875 55.000 5.64 4.67 46.81 3.67
247 248 1.593209 TTTGTCGTGCCGAGACACC 60.593 57.895 5.64 0.00 46.81 4.16
248 249 2.299503 TTTGTCGTGCCGAGACACCA 62.300 55.000 5.64 0.00 46.81 4.17
249 250 2.733593 GTCGTGCCGAGACACCAC 60.734 66.667 0.00 0.00 36.23 4.16
251 252 4.640855 CGTGCCGAGACACCACGT 62.641 66.667 4.43 0.00 45.08 4.49
252 253 3.036084 GTGCCGAGACACCACGTG 61.036 66.667 9.08 9.08 39.75 4.49
253 254 3.220658 TGCCGAGACACCACGTGA 61.221 61.111 19.30 0.00 36.96 4.35
254 255 2.261671 GCCGAGACACCACGTGAT 59.738 61.111 19.30 0.00 36.96 3.06
255 256 2.094659 GCCGAGACACCACGTGATG 61.095 63.158 19.30 14.17 36.96 3.07
256 257 1.584495 CCGAGACACCACGTGATGA 59.416 57.895 19.08 0.00 36.96 2.92
257 258 0.173481 CCGAGACACCACGTGATGAT 59.827 55.000 19.08 4.23 36.96 2.45
258 259 1.550065 CGAGACACCACGTGATGATC 58.450 55.000 19.08 13.01 36.96 2.92
259 260 1.550065 GAGACACCACGTGATGATCG 58.450 55.000 19.08 0.58 36.96 3.69
260 261 0.173481 AGACACCACGTGATGATCGG 59.827 55.000 19.08 0.00 36.96 4.18
261 262 0.806102 GACACCACGTGATGATCGGG 60.806 60.000 19.08 1.85 36.96 5.14
262 263 1.218047 CACCACGTGATGATCGGGT 59.782 57.895 19.30 0.00 35.23 5.28
263 264 1.083806 CACCACGTGATGATCGGGTG 61.084 60.000 19.30 10.19 40.29 4.61
264 265 1.218047 CCACGTGATGATCGGGTGT 59.782 57.895 19.30 0.00 0.00 4.16
265 266 1.083806 CCACGTGATGATCGGGTGTG 61.084 60.000 19.30 6.94 0.00 3.82
266 267 0.108851 CACGTGATGATCGGGTGTGA 60.109 55.000 10.90 0.00 0.00 3.58
267 268 0.824109 ACGTGATGATCGGGTGTGAT 59.176 50.000 0.00 0.00 0.00 3.06
268 269 2.028876 ACGTGATGATCGGGTGTGATA 58.971 47.619 0.00 0.00 0.00 2.15
269 270 2.429250 ACGTGATGATCGGGTGTGATAA 59.571 45.455 0.00 0.00 0.00 1.75
270 271 3.052745 CGTGATGATCGGGTGTGATAAG 58.947 50.000 0.00 0.00 0.00 1.73
271 272 2.802816 GTGATGATCGGGTGTGATAAGC 59.197 50.000 0.00 0.00 0.00 3.09
272 273 2.700371 TGATGATCGGGTGTGATAAGCT 59.300 45.455 0.00 0.00 0.00 3.74
273 274 2.890808 TGATCGGGTGTGATAAGCTC 57.109 50.000 0.00 0.00 0.00 4.09
274 275 2.388735 TGATCGGGTGTGATAAGCTCT 58.611 47.619 0.00 0.00 0.00 4.09
275 276 3.562182 TGATCGGGTGTGATAAGCTCTA 58.438 45.455 0.00 0.00 0.00 2.43
276 277 3.318275 TGATCGGGTGTGATAAGCTCTAC 59.682 47.826 0.00 0.00 0.00 2.59
277 278 1.674441 TCGGGTGTGATAAGCTCTACG 59.326 52.381 0.00 0.00 0.00 3.51
278 279 1.404391 CGGGTGTGATAAGCTCTACGT 59.596 52.381 0.00 0.00 0.00 3.57
279 280 2.159282 CGGGTGTGATAAGCTCTACGTT 60.159 50.000 0.00 0.00 0.00 3.99
280 281 3.445857 GGGTGTGATAAGCTCTACGTTC 58.554 50.000 0.00 0.00 0.00 3.95
281 282 3.119245 GGGTGTGATAAGCTCTACGTTCA 60.119 47.826 0.00 0.00 0.00 3.18
282 283 3.858238 GGTGTGATAAGCTCTACGTTCAC 59.142 47.826 0.00 0.00 35.27 3.18
283 284 4.482386 GTGTGATAAGCTCTACGTTCACA 58.518 43.478 10.51 10.51 40.64 3.58
284 285 5.103000 GTGTGATAAGCTCTACGTTCACAT 58.897 41.667 15.98 0.00 43.54 3.21
285 286 6.263344 GTGTGATAAGCTCTACGTTCACATA 58.737 40.000 15.98 0.00 43.54 2.29
286 287 6.196724 GTGTGATAAGCTCTACGTTCACATAC 59.803 42.308 15.98 3.94 43.54 2.39
287 288 6.127842 TGTGATAAGCTCTACGTTCACATACA 60.128 38.462 10.51 0.00 38.71 2.29
288 289 6.750501 GTGATAAGCTCTACGTTCACATACAA 59.249 38.462 7.65 0.00 34.92 2.41
289 290 6.750501 TGATAAGCTCTACGTTCACATACAAC 59.249 38.462 0.00 0.00 0.00 3.32
295 296 0.165079 CGTTCACATACAACGGGTGC 59.835 55.000 0.00 0.00 42.36 5.01
296 297 1.231221 GTTCACATACAACGGGTGCA 58.769 50.000 0.00 0.00 32.69 4.57
297 298 1.604755 GTTCACATACAACGGGTGCAA 59.395 47.619 0.00 0.00 32.69 4.08
298 299 1.518325 TCACATACAACGGGTGCAAG 58.482 50.000 0.00 0.00 32.69 4.01
299 300 1.070914 TCACATACAACGGGTGCAAGA 59.929 47.619 0.00 0.00 32.69 3.02
300 301 1.196808 CACATACAACGGGTGCAAGAC 59.803 52.381 0.00 0.00 0.00 3.01
301 302 1.202710 ACATACAACGGGTGCAAGACA 60.203 47.619 0.00 0.00 0.00 3.41
302 303 1.464608 CATACAACGGGTGCAAGACAG 59.535 52.381 0.00 0.00 0.00 3.51
303 304 0.466543 TACAACGGGTGCAAGACAGT 59.533 50.000 0.00 0.00 0.00 3.55
304 305 0.393808 ACAACGGGTGCAAGACAGTT 60.394 50.000 0.00 0.00 0.00 3.16
305 306 0.738389 CAACGGGTGCAAGACAGTTT 59.262 50.000 0.00 0.00 0.00 2.66
306 307 1.134175 CAACGGGTGCAAGACAGTTTT 59.866 47.619 0.00 0.00 0.00 2.43
307 308 0.738389 ACGGGTGCAAGACAGTTTTG 59.262 50.000 0.00 0.00 0.00 2.44
315 316 1.782569 CAAGACAGTTTTGCACATGCG 59.217 47.619 0.00 0.00 45.83 4.73
316 317 0.311790 AGACAGTTTTGCACATGCGG 59.688 50.000 0.00 0.00 45.83 5.69
317 318 0.310543 GACAGTTTTGCACATGCGGA 59.689 50.000 0.00 0.00 45.83 5.54
318 319 0.743688 ACAGTTTTGCACATGCGGAA 59.256 45.000 0.00 0.00 45.83 4.30
319 320 1.340889 ACAGTTTTGCACATGCGGAAT 59.659 42.857 0.00 0.00 45.83 3.01
320 321 2.556189 ACAGTTTTGCACATGCGGAATA 59.444 40.909 0.00 0.00 45.83 1.75
321 322 2.916716 CAGTTTTGCACATGCGGAATAC 59.083 45.455 0.00 0.00 45.83 1.89
322 323 2.819608 AGTTTTGCACATGCGGAATACT 59.180 40.909 5.48 5.48 45.83 2.12
323 324 3.119849 AGTTTTGCACATGCGGAATACTC 60.120 43.478 5.48 0.00 45.83 2.59
324 325 1.006086 TTGCACATGCGGAATACTCG 58.994 50.000 0.00 0.00 45.83 4.18
325 326 0.809636 TGCACATGCGGAATACTCGG 60.810 55.000 0.00 0.00 45.83 4.63
326 327 1.498865 GCACATGCGGAATACTCGGG 61.499 60.000 0.00 0.00 0.00 5.14
327 328 0.179084 CACATGCGGAATACTCGGGT 60.179 55.000 0.00 0.00 0.00 5.28
328 329 0.539986 ACATGCGGAATACTCGGGTT 59.460 50.000 0.00 0.00 0.00 4.11
329 330 1.758280 ACATGCGGAATACTCGGGTTA 59.242 47.619 0.00 0.00 0.00 2.85
330 331 2.168936 ACATGCGGAATACTCGGGTTAA 59.831 45.455 0.00 0.00 0.00 2.01
331 332 2.298411 TGCGGAATACTCGGGTTAAC 57.702 50.000 0.00 0.00 0.00 2.01
332 333 1.134729 TGCGGAATACTCGGGTTAACC 60.135 52.381 16.85 16.85 0.00 2.85
333 334 1.137675 GCGGAATACTCGGGTTAACCT 59.862 52.381 23.69 6.97 36.97 3.50
334 335 2.419159 GCGGAATACTCGGGTTAACCTT 60.419 50.000 23.69 9.32 36.97 3.50
335 336 3.192466 CGGAATACTCGGGTTAACCTTG 58.808 50.000 23.69 16.31 36.97 3.61
336 337 3.538591 GGAATACTCGGGTTAACCTTGG 58.461 50.000 23.69 15.14 36.97 3.61
337 338 2.704464 ATACTCGGGTTAACCTTGGC 57.296 50.000 23.69 6.58 36.97 4.52
338 339 0.247185 TACTCGGGTTAACCTTGGCG 59.753 55.000 23.69 17.90 36.97 5.69
339 340 1.294138 CTCGGGTTAACCTTGGCGA 59.706 57.895 23.69 20.80 36.97 5.54
340 341 0.739813 CTCGGGTTAACCTTGGCGAG 60.740 60.000 26.11 26.11 37.60 5.03
341 342 2.396157 CGGGTTAACCTTGGCGAGC 61.396 63.158 23.69 4.03 36.97 5.03
342 343 2.044555 GGGTTAACCTTGGCGAGCC 61.045 63.158 23.69 7.26 35.85 4.70
343 344 1.002502 GGTTAACCTTGGCGAGCCT 60.003 57.895 17.83 0.00 36.94 4.58
344 345 0.251073 GGTTAACCTTGGCGAGCCTA 59.749 55.000 17.83 6.89 36.94 3.93
345 346 1.653151 GTTAACCTTGGCGAGCCTAG 58.347 55.000 16.68 16.68 38.40 3.02
346 347 1.206371 GTTAACCTTGGCGAGCCTAGA 59.794 52.381 23.40 4.54 40.55 2.43
347 348 1.563924 TAACCTTGGCGAGCCTAGAA 58.436 50.000 23.40 6.22 40.55 2.10
348 349 0.912486 AACCTTGGCGAGCCTAGAAT 59.088 50.000 23.40 10.78 40.55 2.40
349 350 0.179000 ACCTTGGCGAGCCTAGAATG 59.821 55.000 23.40 11.60 40.55 2.67
350 351 0.179000 CCTTGGCGAGCCTAGAATGT 59.821 55.000 23.40 0.00 40.55 2.71
351 352 1.412710 CCTTGGCGAGCCTAGAATGTA 59.587 52.381 23.40 0.00 40.55 2.29
352 353 2.474816 CTTGGCGAGCCTAGAATGTAC 58.525 52.381 18.36 0.00 40.55 2.90
353 354 1.480789 TGGCGAGCCTAGAATGTACA 58.519 50.000 15.75 0.00 36.94 2.90
354 355 1.409064 TGGCGAGCCTAGAATGTACAG 59.591 52.381 15.75 0.00 36.94 2.74
355 356 1.681793 GGCGAGCCTAGAATGTACAGA 59.318 52.381 6.90 0.00 0.00 3.41
356 357 2.544069 GGCGAGCCTAGAATGTACAGAC 60.544 54.545 6.90 0.00 0.00 3.51
357 358 2.099263 GCGAGCCTAGAATGTACAGACA 59.901 50.000 0.33 0.00 40.72 3.41
359 360 4.294232 CGAGCCTAGAATGTACAGACATG 58.706 47.826 0.33 0.00 45.93 3.21
360 361 4.626042 GAGCCTAGAATGTACAGACATGG 58.374 47.826 0.33 2.32 45.93 3.66
361 362 3.134458 GCCTAGAATGTACAGACATGGC 58.866 50.000 13.56 13.56 45.93 4.40
362 363 3.733337 CCTAGAATGTACAGACATGGCC 58.267 50.000 0.33 0.00 45.93 5.36
363 364 3.389329 CCTAGAATGTACAGACATGGCCT 59.611 47.826 3.32 0.00 45.93 5.19
364 365 3.550437 AGAATGTACAGACATGGCCTC 57.450 47.619 3.32 0.00 45.93 4.70
365 366 2.159043 AGAATGTACAGACATGGCCTCG 60.159 50.000 3.32 0.00 45.93 4.63
366 367 0.465705 ATGTACAGACATGGCCTCGG 59.534 55.000 3.32 0.00 44.90 4.63
367 368 0.613572 TGTACAGACATGGCCTCGGA 60.614 55.000 3.32 0.00 0.00 4.55
368 369 0.535335 GTACAGACATGGCCTCGGAA 59.465 55.000 3.32 0.00 0.00 4.30
369 370 0.535335 TACAGACATGGCCTCGGAAC 59.465 55.000 3.32 0.00 0.00 3.62
370 371 1.296392 CAGACATGGCCTCGGAACA 59.704 57.895 3.32 0.00 0.00 3.18
371 372 1.021390 CAGACATGGCCTCGGAACAC 61.021 60.000 3.32 0.00 0.00 3.32
372 373 1.194781 AGACATGGCCTCGGAACACT 61.195 55.000 3.32 0.00 0.00 3.55
373 374 1.003355 ACATGGCCTCGGAACACTG 60.003 57.895 3.32 0.00 0.00 3.66
374 375 1.746615 CATGGCCTCGGAACACTGG 60.747 63.158 3.32 0.00 0.00 4.00
375 376 1.918293 ATGGCCTCGGAACACTGGA 60.918 57.895 3.32 0.00 0.00 3.86
376 377 1.903877 ATGGCCTCGGAACACTGGAG 61.904 60.000 3.32 0.00 0.00 3.86
377 378 2.283529 GGCCTCGGAACACTGGAGA 61.284 63.158 0.00 0.00 0.00 3.71
378 379 1.079750 GCCTCGGAACACTGGAGAC 60.080 63.158 0.00 0.00 0.00 3.36
379 380 1.592223 CCTCGGAACACTGGAGACC 59.408 63.158 0.00 0.00 0.00 3.85
380 381 1.213013 CTCGGAACACTGGAGACCG 59.787 63.158 0.00 0.00 44.09 4.79
381 382 3.362262 CGGAACACTGGAGACCGA 58.638 61.111 0.00 0.00 45.31 4.69
382 383 1.663739 CGGAACACTGGAGACCGAA 59.336 57.895 0.00 0.00 45.31 4.30
383 384 0.032952 CGGAACACTGGAGACCGAAA 59.967 55.000 0.00 0.00 45.31 3.46
384 385 1.797025 GGAACACTGGAGACCGAAAG 58.203 55.000 0.00 0.00 0.00 2.62
399 400 1.710013 GAAAGGTCGAGCGTGAATCA 58.290 50.000 9.28 0.00 0.00 2.57
400 401 2.271800 GAAAGGTCGAGCGTGAATCAT 58.728 47.619 9.28 0.00 0.00 2.45
401 402 3.444916 GAAAGGTCGAGCGTGAATCATA 58.555 45.455 9.28 0.00 0.00 2.15
402 403 3.735237 AAGGTCGAGCGTGAATCATAT 57.265 42.857 9.28 0.00 0.00 1.78
403 404 4.848562 AAGGTCGAGCGTGAATCATATA 57.151 40.909 9.28 0.00 0.00 0.86
404 405 4.427096 AGGTCGAGCGTGAATCATATAG 57.573 45.455 9.28 0.00 0.00 1.31
405 406 3.821600 AGGTCGAGCGTGAATCATATAGT 59.178 43.478 9.28 0.00 0.00 2.12
406 407 5.001874 AGGTCGAGCGTGAATCATATAGTA 58.998 41.667 9.28 0.00 0.00 1.82
407 408 5.122554 AGGTCGAGCGTGAATCATATAGTAG 59.877 44.000 9.28 0.00 0.00 2.57
408 409 5.121925 GGTCGAGCGTGAATCATATAGTAGA 59.878 44.000 0.00 0.00 0.00 2.59
409 410 6.183360 GGTCGAGCGTGAATCATATAGTAGAT 60.183 42.308 0.00 0.00 0.00 1.98
410 411 7.011202 GGTCGAGCGTGAATCATATAGTAGATA 59.989 40.741 0.00 0.00 0.00 1.98
411 412 8.552865 GTCGAGCGTGAATCATATAGTAGATAT 58.447 37.037 0.00 0.00 0.00 1.63
412 413 8.552034 TCGAGCGTGAATCATATAGTAGATATG 58.448 37.037 0.00 0.00 34.26 1.78
413 414 8.552034 CGAGCGTGAATCATATAGTAGATATGA 58.448 37.037 9.14 9.14 42.90 2.15
435 436 8.991783 ATGATCAACATAGAGATTTTCACCAT 57.008 30.769 0.00 0.00 37.46 3.55
436 437 8.812513 TGATCAACATAGAGATTTTCACCATT 57.187 30.769 0.00 0.00 0.00 3.16
437 438 8.680001 TGATCAACATAGAGATTTTCACCATTG 58.320 33.333 0.00 0.00 0.00 2.82
438 439 8.812513 ATCAACATAGAGATTTTCACCATTGA 57.187 30.769 0.00 0.00 0.00 2.57
439 440 8.634335 TCAACATAGAGATTTTCACCATTGAA 57.366 30.769 0.00 0.00 40.14 2.69
451 452 6.817765 TTCACCATTGAAAACTACTCCATC 57.182 37.500 0.00 0.00 38.87 3.51
452 453 6.126863 TCACCATTGAAAACTACTCCATCT 57.873 37.500 0.00 0.00 0.00 2.90
453 454 6.173339 TCACCATTGAAAACTACTCCATCTC 58.827 40.000 0.00 0.00 0.00 2.75
454 455 5.939883 CACCATTGAAAACTACTCCATCTCA 59.060 40.000 0.00 0.00 0.00 3.27
455 456 5.940470 ACCATTGAAAACTACTCCATCTCAC 59.060 40.000 0.00 0.00 0.00 3.51
456 457 5.063944 CCATTGAAAACTACTCCATCTCACG 59.936 44.000 0.00 0.00 0.00 4.35
457 458 4.866508 TGAAAACTACTCCATCTCACGT 57.133 40.909 0.00 0.00 0.00 4.49
458 459 4.556233 TGAAAACTACTCCATCTCACGTG 58.444 43.478 9.94 9.94 0.00 4.49
459 460 4.279922 TGAAAACTACTCCATCTCACGTGA 59.720 41.667 18.88 18.88 0.00 4.35
460 461 5.047306 TGAAAACTACTCCATCTCACGTGAT 60.047 40.000 20.40 1.42 0.00 3.06
461 462 4.377839 AACTACTCCATCTCACGTGATG 57.622 45.455 20.40 15.30 42.38 3.07
462 463 3.621558 ACTACTCCATCTCACGTGATGA 58.378 45.455 20.40 18.00 44.71 2.92
463 464 4.211125 ACTACTCCATCTCACGTGATGAT 58.789 43.478 20.40 19.36 44.71 2.45
464 465 3.724508 ACTCCATCTCACGTGATGATC 57.275 47.619 20.40 0.00 44.71 2.92
465 466 2.033927 ACTCCATCTCACGTGATGATCG 59.966 50.000 20.40 15.51 44.71 3.69
466 467 1.338020 TCCATCTCACGTGATGATCGG 59.662 52.381 20.40 21.82 44.71 4.18
467 468 1.338020 CCATCTCACGTGATGATCGGA 59.662 52.381 20.40 12.04 44.71 4.55
468 469 2.389059 CATCTCACGTGATGATCGGAC 58.611 52.381 20.40 0.00 44.71 4.79
469 470 1.459450 TCTCACGTGATGATCGGACA 58.541 50.000 20.40 0.00 36.48 4.02
470 471 2.024414 TCTCACGTGATGATCGGACAT 58.976 47.619 20.40 0.00 36.48 3.06
478 479 3.871006 GTGATGATCGGACATTGCTTACA 59.129 43.478 0.00 0.00 0.00 2.41
486 487 3.366273 CGGACATTGCTTACATTTGCTGT 60.366 43.478 0.00 0.00 42.13 4.40
500 507 6.158598 ACATTTGCTGTTAATGTGTGAATCC 58.841 36.000 0.00 0.00 42.82 3.01
505 512 7.786178 TGCTGTTAATGTGTGAATCCTATAC 57.214 36.000 0.00 0.00 0.00 1.47
571 589 7.379529 GCACATATGTATGCAATAAAACTCCAC 59.620 37.037 8.32 0.00 41.65 4.02
581 599 5.345702 CAATAAAACTCCACTGATGCATGG 58.654 41.667 2.46 0.00 37.32 3.66
592 610 1.281577 TGATGCATGGGTCACTAGCAA 59.718 47.619 2.46 0.00 38.85 3.91
607 625 1.698506 AGCAACCAAAACCGAATGGA 58.301 45.000 0.00 0.00 39.12 3.41
642 667 0.870393 ATGCATATTTGAGAGCGGCG 59.130 50.000 0.51 0.51 0.00 6.46
645 670 0.861837 CATATTTGAGAGCGGCGGAC 59.138 55.000 9.78 0.00 0.00 4.79
660 685 0.874390 CGGACACCATGGTTTGAGTG 59.126 55.000 16.84 5.32 34.54 3.51
661 686 1.247567 GGACACCATGGTTTGAGTGG 58.752 55.000 16.84 4.41 38.96 4.00
751 778 7.173907 CCGAAATTGATCAATACTCAATAGGCT 59.826 37.037 21.00 0.00 41.33 4.58
759 786 9.277783 GATCAATACTCAATAGGCTTACATGTT 57.722 33.333 2.30 0.00 0.00 2.71
775 802 7.062255 GCTTACATGTTTTGTTTCTAGCAATCC 59.938 37.037 2.30 0.00 39.87 3.01
796 824 3.466836 CTCTTGCGTATATTTGGAGGCA 58.533 45.455 0.00 0.00 34.84 4.75
803 831 1.518056 ATATTTGGAGGCATGCGGCG 61.518 55.000 12.44 0.51 46.16 6.46
824 852 6.421405 GGCGATTATTTGCATTGGAAAAATC 58.579 36.000 7.44 14.39 33.51 2.17
884 916 6.948309 AGGTCAACTTAGAATAGTTTGGCATT 59.052 34.615 0.00 0.00 36.24 3.56
885 917 7.121315 AGGTCAACTTAGAATAGTTTGGCATTC 59.879 37.037 0.00 0.00 36.24 2.67
1031 3820 6.229936 ACACTATCTTACTCTCGAGTCTCT 57.770 41.667 13.13 0.00 42.54 3.10
1158 3950 1.146452 TCCGAGGTAGAGGAGGCATA 58.854 55.000 0.00 0.00 31.95 3.14
1174 3966 4.636249 AGGCATACTCACTAATTGCTAGC 58.364 43.478 8.10 8.10 33.86 3.42
1201 3993 5.957842 ACACCAACAAAATCATGTACGAT 57.042 34.783 0.00 0.00 32.02 3.73
1228 4020 3.876914 ACGATGACAAGAACAAGAAGCAA 59.123 39.130 0.00 0.00 0.00 3.91
1229 4021 4.214437 CGATGACAAGAACAAGAAGCAAC 58.786 43.478 0.00 0.00 0.00 4.17
1263 4055 3.438216 TTCTCTCCATGCATTGTTCCA 57.562 42.857 0.00 0.00 0.00 3.53
1332 4124 2.106857 TGGACATGCATATGATCCAGCA 59.893 45.455 6.97 0.00 38.46 4.41
1381 4173 2.820330 AGCCCACAAAACATTTTCACG 58.180 42.857 0.00 0.00 0.00 4.35
1407 4199 1.069513 TGACCCTGTCAACGGTAACTG 59.930 52.381 0.00 0.00 39.78 3.16
1499 4300 3.388676 TGAAAACTTTGGGGTACGAGAGA 59.611 43.478 0.00 0.00 0.00 3.10
1547 4352 2.288395 GGATTGTCCTTTGGTTGTGCAG 60.288 50.000 0.00 0.00 32.53 4.41
1730 4543 8.596380 GTTGTATACTCTTCTTTGTCATGTAGC 58.404 37.037 4.17 0.00 0.00 3.58
1895 4712 0.455815 GGGCGGCCTTGTTAATGAAG 59.544 55.000 22.87 0.00 0.00 3.02
1914 4731 4.020218 TGAAGACATTGAGGTACAAGAGGG 60.020 45.833 0.00 0.00 42.02 4.30
1999 4834 1.682684 GAAGACGGAGGAGGCTCCA 60.683 63.158 33.86 0.00 43.49 3.86
2206 5061 7.225523 GCATGAGGCAAGTATGTTAAATTTG 57.774 36.000 0.00 0.00 43.97 2.32
2207 5062 6.237915 GCATGAGGCAAGTATGTTAAATTTGC 60.238 38.462 0.00 0.00 43.97 3.68
2208 5063 6.338214 TGAGGCAAGTATGTTAAATTTGCA 57.662 33.333 0.00 0.28 44.33 4.08
2209 5064 6.753180 TGAGGCAAGTATGTTAAATTTGCAA 58.247 32.000 0.00 0.00 44.33 4.08
2401 5277 3.463944 CAATATGGTACGTCTTGTCCCC 58.536 50.000 0.00 0.00 0.00 4.81
2450 5335 6.837992 TGATTGCCGTTTCACTATAGAAAAC 58.162 36.000 6.78 14.24 39.05 2.43
2530 5415 5.524511 TGTTCGTTCACTTATGGATTTCG 57.475 39.130 0.00 0.00 0.00 3.46
2576 5461 7.969508 CCGTACCCGTAAATCAACAAAAATAAT 59.030 33.333 0.00 0.00 0.00 1.28
2612 5497 4.817517 AGTCGTTCGAACCTGTCAAATAT 58.182 39.130 22.07 0.00 0.00 1.28
2627 5512 7.538678 CCTGTCAAATATGTACTTTGCTTCAAC 59.461 37.037 0.00 0.00 34.36 3.18
2653 5538 9.561069 CCTATACTAGGTGCTTCAATAAAACAT 57.439 33.333 0.00 0.00 41.18 2.71
2715 5600 7.950512 ACAATTCTTGTGAACATTATGTCCAA 58.049 30.769 0.00 2.09 43.48 3.53
2747 5632 4.968719 TCTTTATGGGCTGGAAGTCTATGA 59.031 41.667 0.00 0.00 41.10 2.15
2791 5676 0.861837 CAAGCACTTCGTCACCACTC 59.138 55.000 0.00 0.00 0.00 3.51
2805 5690 0.911525 CCACTCAGACCCCTGTCCAT 60.912 60.000 0.00 0.00 42.81 3.41
2864 5749 2.025887 AGAAAAAGGCATCGTCAGGGAT 60.026 45.455 0.00 0.00 0.00 3.85
3312 6199 1.948104 TATAGCCGGCATGTGTGTTC 58.052 50.000 31.54 0.00 0.00 3.18
3319 6206 2.518949 CGGCATGTGTGTTCAATAAGC 58.481 47.619 0.00 0.00 0.00 3.09
3322 6209 3.181497 GGCATGTGTGTTCAATAAGCGAT 60.181 43.478 0.00 0.00 0.00 4.58
3470 6418 3.788434 CGAAAGCGTACATGTTGTCTT 57.212 42.857 2.30 1.95 0.00 3.01
3486 6435 2.769663 TGTCTTAATACGTGGCCCTGAT 59.230 45.455 0.00 0.00 0.00 2.90
3525 6474 4.273235 TGCCTACATTACGAGATTGCAATG 59.727 41.667 18.59 5.08 35.10 2.82
3529 6478 4.517285 ACATTACGAGATTGCAATGACCT 58.483 39.130 18.59 7.83 33.56 3.85
3620 6569 6.757897 TGCCGAATTACTTGAAAATCAGAT 57.242 33.333 0.00 0.00 0.00 2.90
3720 6674 4.383770 CGTCCAAGAGCCCCTAGAAATTAA 60.384 45.833 0.00 0.00 0.00 1.40
3927 6893 6.494893 TCATTTTAAATCCCAACACTCTCG 57.505 37.500 0.00 0.00 0.00 4.04
3968 6934 6.212187 TGTCTCTGAGAATGGAGAATGAAGAA 59.788 38.462 9.31 0.00 39.81 2.52
3980 6946 2.905415 ATGAAGAAATCAGGGGCACA 57.095 45.000 0.00 0.00 42.53 4.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.363744 CGGCTTGACACCTTGATCTC 58.636 55.000 0.00 0.00 0.00 2.75
1 2 0.036010 CCGGCTTGACACCTTGATCT 60.036 55.000 0.00 0.00 0.00 2.75
2 3 0.321653 ACCGGCTTGACACCTTGATC 60.322 55.000 0.00 0.00 0.00 2.92
3 4 0.606401 CACCGGCTTGACACCTTGAT 60.606 55.000 0.00 0.00 0.00 2.57
4 5 1.227823 CACCGGCTTGACACCTTGA 60.228 57.895 0.00 0.00 0.00 3.02
5 6 1.227823 TCACCGGCTTGACACCTTG 60.228 57.895 0.00 0.00 0.00 3.61
6 7 1.227853 GTCACCGGCTTGACACCTT 60.228 57.895 17.83 0.00 44.62 3.50
7 8 2.426023 GTCACCGGCTTGACACCT 59.574 61.111 17.83 0.00 44.62 4.00
8 9 2.781595 ATCGTCACCGGCTTGACACC 62.782 60.000 21.26 0.00 45.38 4.16
9 10 1.374252 ATCGTCACCGGCTTGACAC 60.374 57.895 21.26 0.89 45.38 3.67
10 11 1.374125 CATCGTCACCGGCTTGACA 60.374 57.895 21.26 11.24 45.38 3.58
11 12 2.100631 CCATCGTCACCGGCTTGAC 61.101 63.158 13.81 13.81 42.24 3.18
12 13 2.225791 CTCCATCGTCACCGGCTTGA 62.226 60.000 0.00 0.00 33.95 3.02
13 14 1.811266 CTCCATCGTCACCGGCTTG 60.811 63.158 0.00 0.00 33.95 4.01
14 15 1.330655 ATCTCCATCGTCACCGGCTT 61.331 55.000 0.00 0.00 33.95 4.35
15 16 1.330655 AATCTCCATCGTCACCGGCT 61.331 55.000 0.00 0.00 33.95 5.52
16 17 0.387929 TAATCTCCATCGTCACCGGC 59.612 55.000 0.00 0.00 33.95 6.13
17 18 2.296190 TCATAATCTCCATCGTCACCGG 59.704 50.000 0.00 0.00 33.95 5.28
18 19 3.309388 GTCATAATCTCCATCGTCACCG 58.691 50.000 0.00 0.00 0.00 4.94
19 20 3.309388 CGTCATAATCTCCATCGTCACC 58.691 50.000 0.00 0.00 0.00 4.02
20 21 3.243434 ACCGTCATAATCTCCATCGTCAC 60.243 47.826 0.00 0.00 0.00 3.67
21 22 2.956333 ACCGTCATAATCTCCATCGTCA 59.044 45.455 0.00 0.00 0.00 4.35
22 23 3.309388 CACCGTCATAATCTCCATCGTC 58.691 50.000 0.00 0.00 0.00 4.20
23 24 2.545952 GCACCGTCATAATCTCCATCGT 60.546 50.000 0.00 0.00 0.00 3.73
24 25 2.061773 GCACCGTCATAATCTCCATCG 58.938 52.381 0.00 0.00 0.00 3.84
25 26 3.393089 AGCACCGTCATAATCTCCATC 57.607 47.619 0.00 0.00 0.00 3.51
26 27 3.845781 AAGCACCGTCATAATCTCCAT 57.154 42.857 0.00 0.00 0.00 3.41
27 28 3.270027 CAAAGCACCGTCATAATCTCCA 58.730 45.455 0.00 0.00 0.00 3.86
28 29 2.614057 CCAAAGCACCGTCATAATCTCC 59.386 50.000 0.00 0.00 0.00 3.71
29 30 3.531538 TCCAAAGCACCGTCATAATCTC 58.468 45.455 0.00 0.00 0.00 2.75
30 31 3.197766 TCTCCAAAGCACCGTCATAATCT 59.802 43.478 0.00 0.00 0.00 2.40
31 32 3.531538 TCTCCAAAGCACCGTCATAATC 58.468 45.455 0.00 0.00 0.00 1.75
32 33 3.627395 TCTCCAAAGCACCGTCATAAT 57.373 42.857 0.00 0.00 0.00 1.28
33 34 3.270027 CATCTCCAAAGCACCGTCATAA 58.730 45.455 0.00 0.00 0.00 1.90
34 35 2.419990 CCATCTCCAAAGCACCGTCATA 60.420 50.000 0.00 0.00 0.00 2.15
35 36 1.679944 CCATCTCCAAAGCACCGTCAT 60.680 52.381 0.00 0.00 0.00 3.06
36 37 0.321564 CCATCTCCAAAGCACCGTCA 60.322 55.000 0.00 0.00 0.00 4.35
37 38 0.036388 TCCATCTCCAAAGCACCGTC 60.036 55.000 0.00 0.00 0.00 4.79
38 39 0.036010 CTCCATCTCCAAAGCACCGT 60.036 55.000 0.00 0.00 0.00 4.83
39 40 0.250234 TCTCCATCTCCAAAGCACCG 59.750 55.000 0.00 0.00 0.00 4.94
40 41 2.092753 TGATCTCCATCTCCAAAGCACC 60.093 50.000 0.00 0.00 0.00 5.01
41 42 3.272574 TGATCTCCATCTCCAAAGCAC 57.727 47.619 0.00 0.00 0.00 4.40
42 43 4.267536 CTTTGATCTCCATCTCCAAAGCA 58.732 43.478 0.00 0.00 37.81 3.91
43 44 3.631227 CCTTTGATCTCCATCTCCAAAGC 59.369 47.826 0.00 0.00 41.14 3.51
44 45 3.631227 GCCTTTGATCTCCATCTCCAAAG 59.369 47.826 0.00 0.00 41.75 2.77
45 46 3.010472 TGCCTTTGATCTCCATCTCCAAA 59.990 43.478 0.00 0.00 0.00 3.28
46 47 2.577563 TGCCTTTGATCTCCATCTCCAA 59.422 45.455 0.00 0.00 0.00 3.53
47 48 2.092753 GTGCCTTTGATCTCCATCTCCA 60.093 50.000 0.00 0.00 0.00 3.86
48 49 2.092753 TGTGCCTTTGATCTCCATCTCC 60.093 50.000 0.00 0.00 0.00 3.71
49 50 3.272574 TGTGCCTTTGATCTCCATCTC 57.727 47.619 0.00 0.00 0.00 2.75
50 51 3.265221 TCTTGTGCCTTTGATCTCCATCT 59.735 43.478 0.00 0.00 0.00 2.90
51 52 3.614092 TCTTGTGCCTTTGATCTCCATC 58.386 45.455 0.00 0.00 0.00 3.51
52 53 3.726557 TCTTGTGCCTTTGATCTCCAT 57.273 42.857 0.00 0.00 0.00 3.41
53 54 3.009363 TCATCTTGTGCCTTTGATCTCCA 59.991 43.478 0.00 0.00 0.00 3.86
54 55 3.614092 TCATCTTGTGCCTTTGATCTCC 58.386 45.455 0.00 0.00 0.00 3.71
55 56 4.880120 TCATCATCTTGTGCCTTTGATCTC 59.120 41.667 0.00 0.00 0.00 2.75
56 57 4.851843 TCATCATCTTGTGCCTTTGATCT 58.148 39.130 0.00 0.00 0.00 2.75
57 58 5.507482 CCATCATCATCTTGTGCCTTTGATC 60.507 44.000 0.00 0.00 0.00 2.92
58 59 4.341235 CCATCATCATCTTGTGCCTTTGAT 59.659 41.667 0.00 0.00 0.00 2.57
59 60 3.697542 CCATCATCATCTTGTGCCTTTGA 59.302 43.478 0.00 0.00 0.00 2.69
60 61 3.737047 GCCATCATCATCTTGTGCCTTTG 60.737 47.826 0.00 0.00 0.00 2.77
61 62 2.429610 GCCATCATCATCTTGTGCCTTT 59.570 45.455 0.00 0.00 0.00 3.11
62 63 2.029623 GCCATCATCATCTTGTGCCTT 58.970 47.619 0.00 0.00 0.00 4.35
63 64 1.688772 GCCATCATCATCTTGTGCCT 58.311 50.000 0.00 0.00 0.00 4.75
64 65 0.672342 GGCCATCATCATCTTGTGCC 59.328 55.000 0.00 0.00 0.00 5.01
65 66 1.395635 TGGCCATCATCATCTTGTGC 58.604 50.000 0.00 0.00 0.00 4.57
66 67 5.007682 TGATATGGCCATCATCATCTTGTG 58.992 41.667 24.80 0.00 37.30 3.33
67 68 5.251182 TGATATGGCCATCATCATCTTGT 57.749 39.130 24.80 0.00 37.30 3.16
68 69 5.652452 ACATGATATGGCCATCATCATCTTG 59.348 40.000 29.05 27.53 42.47 3.02
69 70 5.827756 ACATGATATGGCCATCATCATCTT 58.172 37.500 29.05 20.19 42.47 2.40
70 71 5.045140 TGACATGATATGGCCATCATCATCT 60.045 40.000 29.05 23.46 42.47 2.90
71 72 5.066117 GTGACATGATATGGCCATCATCATC 59.934 44.000 29.05 23.78 42.47 2.92
72 73 4.948004 GTGACATGATATGGCCATCATCAT 59.052 41.667 27.62 27.62 42.47 2.45
73 74 4.202482 TGTGACATGATATGGCCATCATCA 60.202 41.667 24.80 25.87 42.47 3.07
74 75 4.329392 TGTGACATGATATGGCCATCATC 58.671 43.478 24.80 21.59 42.47 2.92
75 76 4.376225 TGTGACATGATATGGCCATCAT 57.624 40.909 24.80 19.04 44.65 2.45
76 77 3.860968 TGTGACATGATATGGCCATCA 57.139 42.857 24.80 17.36 37.55 3.07
77 78 7.400599 AAATATGTGACATGATATGGCCATC 57.599 36.000 24.80 10.99 37.55 3.51
78 79 7.452189 TCAAAATATGTGACATGATATGGCCAT 59.548 33.333 24.45 24.45 37.55 4.40
79 80 6.776603 TCAAAATATGTGACATGATATGGCCA 59.223 34.615 8.56 8.56 37.55 5.36
80 81 7.218228 TCAAAATATGTGACATGATATGGCC 57.782 36.000 8.61 0.00 37.55 5.36
81 82 9.135843 CAATCAAAATATGTGACATGATATGGC 57.864 33.333 8.61 0.00 39.32 4.40
82 83 9.135843 GCAATCAAAATATGTGACATGATATGG 57.864 33.333 8.61 0.00 33.60 2.74
83 84 9.685828 TGCAATCAAAATATGTGACATGATATG 57.314 29.630 8.61 2.93 0.00 1.78
85 86 9.685828 CATGCAATCAAAATATGTGACATGATA 57.314 29.630 8.61 0.00 33.30 2.15
86 87 8.201464 ACATGCAATCAAAATATGTGACATGAT 58.799 29.630 8.61 0.24 34.43 2.45
87 88 7.548967 ACATGCAATCAAAATATGTGACATGA 58.451 30.769 8.61 0.00 34.43 3.07
88 89 7.764695 ACATGCAATCAAAATATGTGACATG 57.235 32.000 8.61 12.56 35.40 3.21
93 94 7.764695 ACATCACATGCAATCAAAATATGTG 57.235 32.000 0.00 0.00 46.03 3.21
94 95 8.780846 AAACATCACATGCAATCAAAATATGT 57.219 26.923 0.00 0.00 32.60 2.29
124 125 8.556194 CGTACTAAGCAAAATAGGATGCATAAA 58.444 33.333 0.00 0.00 44.95 1.40
125 126 7.172532 CCGTACTAAGCAAAATAGGATGCATAA 59.827 37.037 0.00 0.00 44.95 1.90
126 127 6.649141 CCGTACTAAGCAAAATAGGATGCATA 59.351 38.462 0.00 0.00 44.95 3.14
127 128 5.470098 CCGTACTAAGCAAAATAGGATGCAT 59.530 40.000 0.00 0.00 44.95 3.96
128 129 4.814234 CCGTACTAAGCAAAATAGGATGCA 59.186 41.667 0.00 0.00 44.95 3.96
129 130 4.319549 GCCGTACTAAGCAAAATAGGATGC 60.320 45.833 0.00 0.00 42.87 3.91
130 131 4.084537 CGCCGTACTAAGCAAAATAGGATG 60.085 45.833 0.00 0.00 0.00 3.51
131 132 4.056050 CGCCGTACTAAGCAAAATAGGAT 58.944 43.478 0.00 0.00 0.00 3.24
132 133 3.450578 CGCCGTACTAAGCAAAATAGGA 58.549 45.455 0.00 0.00 0.00 2.94
133 134 2.542595 CCGCCGTACTAAGCAAAATAGG 59.457 50.000 0.00 0.00 0.00 2.57
134 135 3.192466 ACCGCCGTACTAAGCAAAATAG 58.808 45.455 0.00 0.00 0.00 1.73
135 136 3.249986 ACCGCCGTACTAAGCAAAATA 57.750 42.857 0.00 0.00 0.00 1.40
136 137 2.103537 ACCGCCGTACTAAGCAAAAT 57.896 45.000 0.00 0.00 0.00 1.82
137 138 2.609350 CTACCGCCGTACTAAGCAAAA 58.391 47.619 0.00 0.00 0.00 2.44
138 139 1.736696 GCTACCGCCGTACTAAGCAAA 60.737 52.381 0.00 0.00 0.00 3.68
139 140 0.179129 GCTACCGCCGTACTAAGCAA 60.179 55.000 0.00 0.00 0.00 3.91
140 141 1.314534 TGCTACCGCCGTACTAAGCA 61.315 55.000 0.00 0.00 34.43 3.91
141 142 0.031721 ATGCTACCGCCGTACTAAGC 59.968 55.000 0.00 0.00 34.43 3.09
142 143 2.503920 AATGCTACCGCCGTACTAAG 57.496 50.000 0.00 0.00 34.43 2.18
143 144 5.473162 TCTTATAATGCTACCGCCGTACTAA 59.527 40.000 0.00 0.00 34.43 2.24
144 145 5.003160 TCTTATAATGCTACCGCCGTACTA 58.997 41.667 0.00 0.00 34.43 1.82
145 146 3.822735 TCTTATAATGCTACCGCCGTACT 59.177 43.478 0.00 0.00 34.43 2.73
146 147 4.164822 TCTTATAATGCTACCGCCGTAC 57.835 45.455 0.00 0.00 34.43 3.67
147 148 4.460034 TCATCTTATAATGCTACCGCCGTA 59.540 41.667 0.00 0.00 34.43 4.02
148 149 3.257375 TCATCTTATAATGCTACCGCCGT 59.743 43.478 0.00 0.00 34.43 5.68
149 150 3.845178 TCATCTTATAATGCTACCGCCG 58.155 45.455 0.00 0.00 34.43 6.46
150 151 4.811557 GGATCATCTTATAATGCTACCGCC 59.188 45.833 0.00 0.00 34.43 6.13
151 152 4.811557 GGGATCATCTTATAATGCTACCGC 59.188 45.833 0.00 0.00 0.00 5.68
152 153 6.227298 AGGGATCATCTTATAATGCTACCG 57.773 41.667 0.00 0.00 0.00 4.02
153 154 8.763601 AGTAAGGGATCATCTTATAATGCTACC 58.236 37.037 9.86 0.00 0.00 3.18
165 166 9.413734 CCTTGAAATTTTAGTAAGGGATCATCT 57.586 33.333 12.79 0.00 35.41 2.90
166 167 9.190317 ACCTTGAAATTTTAGTAAGGGATCATC 57.810 33.333 19.59 0.00 41.65 2.92
180 181 8.803235 GGGAGAACACTTATACCTTGAAATTTT 58.197 33.333 0.00 0.00 0.00 1.82
181 182 8.170730 AGGGAGAACACTTATACCTTGAAATTT 58.829 33.333 0.00 0.00 0.00 1.82
182 183 7.611855 CAGGGAGAACACTTATACCTTGAAATT 59.388 37.037 0.00 0.00 0.00 1.82
183 184 7.037586 TCAGGGAGAACACTTATACCTTGAAAT 60.038 37.037 0.00 0.00 32.30 2.17
184 185 6.271391 TCAGGGAGAACACTTATACCTTGAAA 59.729 38.462 0.00 0.00 32.30 2.69
185 186 5.783360 TCAGGGAGAACACTTATACCTTGAA 59.217 40.000 0.00 0.00 32.30 2.69
186 187 5.338632 TCAGGGAGAACACTTATACCTTGA 58.661 41.667 0.00 0.00 32.67 3.02
187 188 5.187967 ACTCAGGGAGAACACTTATACCTTG 59.812 44.000 0.00 0.00 33.32 3.61
188 189 5.342866 ACTCAGGGAGAACACTTATACCTT 58.657 41.667 0.00 0.00 33.32 3.50
189 190 4.949121 ACTCAGGGAGAACACTTATACCT 58.051 43.478 0.00 0.00 33.32 3.08
190 191 6.739008 GCATACTCAGGGAGAACACTTATACC 60.739 46.154 0.00 0.00 33.32 2.73
191 192 6.183360 TGCATACTCAGGGAGAACACTTATAC 60.183 42.308 0.00 0.00 33.32 1.47
192 193 5.897250 TGCATACTCAGGGAGAACACTTATA 59.103 40.000 0.00 0.00 33.32 0.98
193 194 4.716784 TGCATACTCAGGGAGAACACTTAT 59.283 41.667 0.00 0.00 33.32 1.73
194 195 4.081642 GTGCATACTCAGGGAGAACACTTA 60.082 45.833 0.00 0.00 33.32 2.24
195 196 2.906389 TGCATACTCAGGGAGAACACTT 59.094 45.455 0.00 0.00 33.32 3.16
196 197 2.234908 GTGCATACTCAGGGAGAACACT 59.765 50.000 0.00 0.00 33.32 3.55
197 198 2.622436 GTGCATACTCAGGGAGAACAC 58.378 52.381 0.00 0.00 33.32 3.32
198 199 1.555075 GGTGCATACTCAGGGAGAACA 59.445 52.381 0.00 0.00 33.32 3.18
199 200 1.471676 CGGTGCATACTCAGGGAGAAC 60.472 57.143 0.00 0.00 33.32 3.01
200 201 0.824109 CGGTGCATACTCAGGGAGAA 59.176 55.000 0.00 0.00 33.32 2.87
201 202 0.324368 ACGGTGCATACTCAGGGAGA 60.324 55.000 0.00 0.00 33.32 3.71
202 203 0.537188 AACGGTGCATACTCAGGGAG 59.463 55.000 0.00 0.00 35.52 4.30
203 204 0.249120 CAACGGTGCATACTCAGGGA 59.751 55.000 0.00 0.00 0.00 4.20
204 205 2.767536 CAACGGTGCATACTCAGGG 58.232 57.895 0.00 0.00 0.00 4.45
214 215 1.654137 CAAACTGTCGCAACGGTGC 60.654 57.895 17.50 17.50 44.41 5.01
215 216 0.315869 GACAAACTGTCGCAACGGTG 60.316 55.000 0.00 0.00 44.41 4.94
217 218 4.893241 GACAAACTGTCGCAACGG 57.107 55.556 0.00 0.00 37.67 4.44
235 236 2.765250 ATCACGTGGTGTCTCGGCAC 62.765 60.000 17.00 0.00 38.56 5.01
236 237 2.570284 ATCACGTGGTGTCTCGGCA 61.570 57.895 17.00 0.00 34.79 5.69
237 238 2.094659 CATCACGTGGTGTCTCGGC 61.095 63.158 20.85 0.00 34.79 5.54
238 239 0.173481 ATCATCACGTGGTGTCTCGG 59.827 55.000 27.10 1.70 34.79 4.63
239 240 1.550065 GATCATCACGTGGTGTCTCG 58.450 55.000 27.10 2.49 34.79 4.04
240 241 1.550065 CGATCATCACGTGGTGTCTC 58.450 55.000 27.10 21.93 34.79 3.36
241 242 0.173481 CCGATCATCACGTGGTGTCT 59.827 55.000 27.10 16.35 34.79 3.41
242 243 0.806102 CCCGATCATCACGTGGTGTC 60.806 60.000 27.10 21.03 34.79 3.67
243 244 1.218047 CCCGATCATCACGTGGTGT 59.782 57.895 27.10 15.24 34.79 4.16
244 245 1.083806 CACCCGATCATCACGTGGTG 61.084 60.000 23.01 23.01 41.46 4.17
245 246 1.218047 CACCCGATCATCACGTGGT 59.782 57.895 17.00 5.26 35.78 4.16
246 247 1.083806 CACACCCGATCATCACGTGG 61.084 60.000 17.00 0.00 0.00 4.94
247 248 0.108851 TCACACCCGATCATCACGTG 60.109 55.000 9.94 9.94 0.00 4.49
248 249 0.824109 ATCACACCCGATCATCACGT 59.176 50.000 0.00 0.00 0.00 4.49
249 250 2.793278 TATCACACCCGATCATCACG 57.207 50.000 0.00 0.00 0.00 4.35
250 251 2.802816 GCTTATCACACCCGATCATCAC 59.197 50.000 0.00 0.00 0.00 3.06
251 252 2.700371 AGCTTATCACACCCGATCATCA 59.300 45.455 0.00 0.00 0.00 3.07
252 253 3.006323 AGAGCTTATCACACCCGATCATC 59.994 47.826 0.00 0.00 0.00 2.92
253 254 2.968574 AGAGCTTATCACACCCGATCAT 59.031 45.455 0.00 0.00 0.00 2.45
254 255 2.388735 AGAGCTTATCACACCCGATCA 58.611 47.619 0.00 0.00 0.00 2.92
255 256 3.609644 CGTAGAGCTTATCACACCCGATC 60.610 52.174 0.00 0.00 0.00 3.69
256 257 2.293677 CGTAGAGCTTATCACACCCGAT 59.706 50.000 0.00 0.00 0.00 4.18
257 258 1.674441 CGTAGAGCTTATCACACCCGA 59.326 52.381 0.00 0.00 0.00 5.14
258 259 1.404391 ACGTAGAGCTTATCACACCCG 59.596 52.381 0.00 0.00 0.00 5.28
259 260 3.119245 TGAACGTAGAGCTTATCACACCC 60.119 47.826 0.00 0.00 0.00 4.61
260 261 3.858238 GTGAACGTAGAGCTTATCACACC 59.142 47.826 7.65 0.00 37.65 4.16
261 262 4.482386 TGTGAACGTAGAGCTTATCACAC 58.518 43.478 10.51 0.00 41.39 3.82
262 263 4.776795 TGTGAACGTAGAGCTTATCACA 57.223 40.909 10.51 10.51 43.31 3.58
263 264 6.263344 TGTATGTGAACGTAGAGCTTATCAC 58.737 40.000 5.93 5.93 38.08 3.06
264 265 6.445357 TGTATGTGAACGTAGAGCTTATCA 57.555 37.500 0.00 0.00 0.00 2.15
265 266 6.075519 CGTTGTATGTGAACGTAGAGCTTATC 60.076 42.308 0.00 0.00 41.00 1.75
266 267 5.742453 CGTTGTATGTGAACGTAGAGCTTAT 59.258 40.000 0.00 0.00 41.00 1.73
267 268 5.090757 CGTTGTATGTGAACGTAGAGCTTA 58.909 41.667 0.00 0.00 41.00 3.09
268 269 3.918591 CGTTGTATGTGAACGTAGAGCTT 59.081 43.478 0.00 0.00 41.00 3.74
269 270 3.499048 CGTTGTATGTGAACGTAGAGCT 58.501 45.455 0.00 0.00 41.00 4.09
270 271 2.597305 CCGTTGTATGTGAACGTAGAGC 59.403 50.000 0.00 0.00 43.70 4.09
271 272 3.176708 CCCGTTGTATGTGAACGTAGAG 58.823 50.000 0.00 0.00 43.70 2.43
272 273 2.557924 ACCCGTTGTATGTGAACGTAGA 59.442 45.455 0.00 0.00 43.70 2.59
273 274 2.664568 CACCCGTTGTATGTGAACGTAG 59.335 50.000 0.00 0.00 43.70 3.51
274 275 2.674954 CACCCGTTGTATGTGAACGTA 58.325 47.619 0.00 0.00 43.70 3.57
275 276 1.504359 CACCCGTTGTATGTGAACGT 58.496 50.000 0.00 0.00 43.70 3.99
276 277 0.165079 GCACCCGTTGTATGTGAACG 59.835 55.000 0.00 0.00 44.59 3.95
277 278 1.231221 TGCACCCGTTGTATGTGAAC 58.769 50.000 0.00 0.00 31.66 3.18
278 279 1.876799 CTTGCACCCGTTGTATGTGAA 59.123 47.619 0.00 0.00 31.66 3.18
279 280 1.070914 TCTTGCACCCGTTGTATGTGA 59.929 47.619 0.00 0.00 31.66 3.58
280 281 1.196808 GTCTTGCACCCGTTGTATGTG 59.803 52.381 0.00 0.00 0.00 3.21
281 282 1.202710 TGTCTTGCACCCGTTGTATGT 60.203 47.619 0.00 0.00 0.00 2.29
282 283 1.464608 CTGTCTTGCACCCGTTGTATG 59.535 52.381 0.00 0.00 0.00 2.39
283 284 1.071699 ACTGTCTTGCACCCGTTGTAT 59.928 47.619 0.00 0.00 0.00 2.29
284 285 0.466543 ACTGTCTTGCACCCGTTGTA 59.533 50.000 0.00 0.00 0.00 2.41
285 286 0.393808 AACTGTCTTGCACCCGTTGT 60.394 50.000 0.00 0.00 0.00 3.32
286 287 0.738389 AAACTGTCTTGCACCCGTTG 59.262 50.000 0.00 0.00 0.00 4.10
287 288 1.134175 CAAAACTGTCTTGCACCCGTT 59.866 47.619 0.00 0.00 0.00 4.44
288 289 0.738389 CAAAACTGTCTTGCACCCGT 59.262 50.000 0.00 0.00 0.00 5.28
289 290 0.594796 GCAAAACTGTCTTGCACCCG 60.595 55.000 13.62 0.00 46.78 5.28
290 291 3.272766 GCAAAACTGTCTTGCACCC 57.727 52.632 13.62 0.00 46.78 4.61
295 296 1.782569 CGCATGTGCAAAACTGTCTTG 59.217 47.619 5.77 0.00 42.21 3.02
296 297 1.269206 CCGCATGTGCAAAACTGTCTT 60.269 47.619 0.00 0.00 42.21 3.01
297 298 0.311790 CCGCATGTGCAAAACTGTCT 59.688 50.000 0.00 0.00 42.21 3.41
298 299 0.310543 TCCGCATGTGCAAAACTGTC 59.689 50.000 0.00 0.00 42.21 3.51
299 300 0.743688 TTCCGCATGTGCAAAACTGT 59.256 45.000 0.00 0.00 42.21 3.55
300 301 2.068837 ATTCCGCATGTGCAAAACTG 57.931 45.000 0.00 0.00 42.21 3.16
301 302 2.819608 AGTATTCCGCATGTGCAAAACT 59.180 40.909 0.00 0.00 42.21 2.66
302 303 3.171277 GAGTATTCCGCATGTGCAAAAC 58.829 45.455 0.00 0.00 42.21 2.43
303 304 2.159585 CGAGTATTCCGCATGTGCAAAA 60.160 45.455 0.00 0.00 42.21 2.44
304 305 1.396648 CGAGTATTCCGCATGTGCAAA 59.603 47.619 0.00 0.00 42.21 3.68
305 306 1.006086 CGAGTATTCCGCATGTGCAA 58.994 50.000 0.00 0.00 42.21 4.08
306 307 0.809636 CCGAGTATTCCGCATGTGCA 60.810 55.000 0.00 0.00 42.21 4.57
307 308 1.498865 CCCGAGTATTCCGCATGTGC 61.499 60.000 0.00 0.00 37.78 4.57
308 309 0.179084 ACCCGAGTATTCCGCATGTG 60.179 55.000 0.00 0.00 0.00 3.21
309 310 0.539986 AACCCGAGTATTCCGCATGT 59.460 50.000 0.00 0.00 0.00 3.21
310 311 2.519377 TAACCCGAGTATTCCGCATG 57.481 50.000 0.00 0.00 0.00 4.06
311 312 2.484241 GGTTAACCCGAGTATTCCGCAT 60.484 50.000 14.16 0.00 0.00 4.73
312 313 1.134729 GGTTAACCCGAGTATTCCGCA 60.135 52.381 14.16 0.00 0.00 5.69
313 314 1.137675 AGGTTAACCCGAGTATTCCGC 59.862 52.381 21.30 0.00 38.74 5.54
314 315 3.192466 CAAGGTTAACCCGAGTATTCCG 58.808 50.000 21.30 0.00 38.74 4.30
315 316 3.538591 CCAAGGTTAACCCGAGTATTCC 58.461 50.000 21.30 0.00 38.74 3.01
316 317 2.941064 GCCAAGGTTAACCCGAGTATTC 59.059 50.000 21.30 0.00 38.74 1.75
317 318 2.678769 CGCCAAGGTTAACCCGAGTATT 60.679 50.000 21.30 4.87 38.74 1.89
318 319 1.134610 CGCCAAGGTTAACCCGAGTAT 60.135 52.381 21.30 0.00 38.74 2.12
319 320 0.247185 CGCCAAGGTTAACCCGAGTA 59.753 55.000 21.30 0.00 38.74 2.59
320 321 1.004200 CGCCAAGGTTAACCCGAGT 60.004 57.895 21.30 0.00 38.74 4.18
321 322 0.739813 CTCGCCAAGGTTAACCCGAG 60.740 60.000 26.11 26.11 37.60 4.63
322 323 1.294138 CTCGCCAAGGTTAACCCGA 59.706 57.895 21.30 19.73 38.74 5.14
323 324 2.396157 GCTCGCCAAGGTTAACCCG 61.396 63.158 21.30 16.66 38.74 5.28
324 325 2.044555 GGCTCGCCAAGGTTAACCC 61.045 63.158 21.30 4.79 34.40 4.11
325 326 0.251073 TAGGCTCGCCAAGGTTAACC 59.749 55.000 17.41 17.41 38.92 2.85
326 327 1.206371 TCTAGGCTCGCCAAGGTTAAC 59.794 52.381 11.02 0.00 38.92 2.01
327 328 1.563924 TCTAGGCTCGCCAAGGTTAA 58.436 50.000 11.02 0.00 38.92 2.01
328 329 1.563924 TTCTAGGCTCGCCAAGGTTA 58.436 50.000 11.02 0.00 38.92 2.85
329 330 0.912486 ATTCTAGGCTCGCCAAGGTT 59.088 50.000 11.02 0.00 38.92 3.50
330 331 0.179000 CATTCTAGGCTCGCCAAGGT 59.821 55.000 11.02 0.00 38.92 3.50
331 332 0.179000 ACATTCTAGGCTCGCCAAGG 59.821 55.000 11.02 0.32 38.92 3.61
332 333 2.159099 TGTACATTCTAGGCTCGCCAAG 60.159 50.000 11.02 0.00 38.92 3.61
333 334 1.828595 TGTACATTCTAGGCTCGCCAA 59.171 47.619 11.02 0.00 38.92 4.52
334 335 1.409064 CTGTACATTCTAGGCTCGCCA 59.591 52.381 11.02 0.00 38.92 5.69
335 336 1.681793 TCTGTACATTCTAGGCTCGCC 59.318 52.381 0.00 0.00 0.00 5.54
336 337 2.099263 TGTCTGTACATTCTAGGCTCGC 59.901 50.000 0.00 0.00 0.00 5.03
337 338 4.294232 CATGTCTGTACATTCTAGGCTCG 58.706 47.826 0.00 0.00 44.07 5.03
338 339 4.626042 CCATGTCTGTACATTCTAGGCTC 58.374 47.826 0.00 0.00 44.07 4.70
339 340 3.181461 GCCATGTCTGTACATTCTAGGCT 60.181 47.826 16.82 0.00 44.07 4.58
340 341 3.134458 GCCATGTCTGTACATTCTAGGC 58.866 50.000 11.42 11.42 44.07 3.93
341 342 3.389329 AGGCCATGTCTGTACATTCTAGG 59.611 47.826 5.01 0.00 44.07 3.02
342 343 4.626042 GAGGCCATGTCTGTACATTCTAG 58.374 47.826 5.01 0.00 44.07 2.43
343 344 3.068165 CGAGGCCATGTCTGTACATTCTA 59.932 47.826 5.01 0.00 44.07 2.10
344 345 2.159043 CGAGGCCATGTCTGTACATTCT 60.159 50.000 5.01 0.00 44.07 2.40
345 346 2.205074 CGAGGCCATGTCTGTACATTC 58.795 52.381 5.01 0.00 44.07 2.67
346 347 1.134401 CCGAGGCCATGTCTGTACATT 60.134 52.381 5.01 0.00 44.07 2.71
348 349 0.613572 TCCGAGGCCATGTCTGTACA 60.614 55.000 5.01 0.00 40.69 2.90
349 350 0.535335 TTCCGAGGCCATGTCTGTAC 59.465 55.000 5.01 0.00 0.00 2.90
350 351 0.535335 GTTCCGAGGCCATGTCTGTA 59.465 55.000 5.01 0.00 0.00 2.74
351 352 1.296715 GTTCCGAGGCCATGTCTGT 59.703 57.895 5.01 0.00 0.00 3.41
352 353 1.021390 GTGTTCCGAGGCCATGTCTG 61.021 60.000 5.01 0.00 0.00 3.51
353 354 1.194781 AGTGTTCCGAGGCCATGTCT 61.195 55.000 5.01 0.00 0.00 3.41
354 355 1.021390 CAGTGTTCCGAGGCCATGTC 61.021 60.000 5.01 0.00 0.00 3.06
355 356 1.003355 CAGTGTTCCGAGGCCATGT 60.003 57.895 5.01 0.00 0.00 3.21
356 357 1.746615 CCAGTGTTCCGAGGCCATG 60.747 63.158 5.01 0.00 0.00 3.66
357 358 1.903877 CTCCAGTGTTCCGAGGCCAT 61.904 60.000 5.01 0.00 0.00 4.40
358 359 2.525629 TCCAGTGTTCCGAGGCCA 60.526 61.111 5.01 0.00 0.00 5.36
359 360 2.266055 CTCCAGTGTTCCGAGGCC 59.734 66.667 0.00 0.00 0.00 5.19
360 361 1.079750 GTCTCCAGTGTTCCGAGGC 60.080 63.158 0.00 0.00 0.00 4.70
361 362 1.592223 GGTCTCCAGTGTTCCGAGG 59.408 63.158 0.00 0.00 0.00 4.63
362 363 1.213013 CGGTCTCCAGTGTTCCGAG 59.787 63.158 0.00 0.00 43.22 4.63
363 364 0.824595 TTCGGTCTCCAGTGTTCCGA 60.825 55.000 9.86 9.86 46.54 4.55
364 365 0.032952 TTTCGGTCTCCAGTGTTCCG 59.967 55.000 0.00 0.00 42.12 4.30
365 366 1.608283 CCTTTCGGTCTCCAGTGTTCC 60.608 57.143 0.00 0.00 0.00 3.62
366 367 1.070289 ACCTTTCGGTCTCCAGTGTTC 59.930 52.381 0.00 0.00 40.27 3.18
367 368 1.129058 ACCTTTCGGTCTCCAGTGTT 58.871 50.000 0.00 0.00 40.27 3.32
368 369 2.836020 ACCTTTCGGTCTCCAGTGT 58.164 52.632 0.00 0.00 40.27 3.55
378 379 0.736325 ATTCACGCTCGACCTTTCGG 60.736 55.000 0.00 0.00 45.90 4.30
380 381 1.710013 TGATTCACGCTCGACCTTTC 58.290 50.000 0.00 0.00 0.00 2.62
381 382 2.386661 ATGATTCACGCTCGACCTTT 57.613 45.000 0.00 0.00 0.00 3.11
382 383 3.735237 ATATGATTCACGCTCGACCTT 57.265 42.857 0.00 0.00 0.00 3.50
383 384 3.821600 ACTATATGATTCACGCTCGACCT 59.178 43.478 0.00 0.00 0.00 3.85
384 385 4.162096 ACTATATGATTCACGCTCGACC 57.838 45.455 0.00 0.00 0.00 4.79
385 386 6.166911 TCTACTATATGATTCACGCTCGAC 57.833 41.667 0.00 0.00 0.00 4.20
386 387 6.986904 ATCTACTATATGATTCACGCTCGA 57.013 37.500 0.00 0.00 0.00 4.04
387 388 8.552034 TCATATCTACTATATGATTCACGCTCG 58.448 37.037 4.05 0.00 36.43 5.03
410 411 8.991783 ATGGTGAAAATCTCTATGTTGATCAT 57.008 30.769 0.00 0.00 40.25 2.45
411 412 8.680001 CAATGGTGAAAATCTCTATGTTGATCA 58.320 33.333 0.00 0.00 0.00 2.92
412 413 8.896744 TCAATGGTGAAAATCTCTATGTTGATC 58.103 33.333 0.00 0.00 0.00 2.92
413 414 8.812513 TCAATGGTGAAAATCTCTATGTTGAT 57.187 30.769 0.00 0.00 0.00 2.57
414 415 8.634335 TTCAATGGTGAAAATCTCTATGTTGA 57.366 30.769 0.00 0.00 40.87 3.18
428 429 6.542821 AGATGGAGTAGTTTTCAATGGTGAA 58.457 36.000 0.00 0.00 42.12 3.18
429 430 6.126863 AGATGGAGTAGTTTTCAATGGTGA 57.873 37.500 0.00 0.00 0.00 4.02
430 431 5.939883 TGAGATGGAGTAGTTTTCAATGGTG 59.060 40.000 0.00 0.00 0.00 4.17
431 432 5.940470 GTGAGATGGAGTAGTTTTCAATGGT 59.060 40.000 0.00 0.00 0.00 3.55
432 433 5.063944 CGTGAGATGGAGTAGTTTTCAATGG 59.936 44.000 0.00 0.00 0.00 3.16
433 434 5.639506 ACGTGAGATGGAGTAGTTTTCAATG 59.360 40.000 0.00 0.00 0.00 2.82
434 435 5.639506 CACGTGAGATGGAGTAGTTTTCAAT 59.360 40.000 10.90 0.00 0.00 2.57
435 436 4.988540 CACGTGAGATGGAGTAGTTTTCAA 59.011 41.667 10.90 0.00 0.00 2.69
436 437 4.279922 TCACGTGAGATGGAGTAGTTTTCA 59.720 41.667 15.76 0.00 0.00 2.69
437 438 4.806330 TCACGTGAGATGGAGTAGTTTTC 58.194 43.478 15.76 0.00 0.00 2.29
438 439 4.866508 TCACGTGAGATGGAGTAGTTTT 57.133 40.909 15.76 0.00 0.00 2.43
439 440 4.462834 TCATCACGTGAGATGGAGTAGTTT 59.537 41.667 24.41 0.00 44.30 2.66
440 441 4.017126 TCATCACGTGAGATGGAGTAGTT 58.983 43.478 24.41 0.00 44.30 2.24
441 442 3.621558 TCATCACGTGAGATGGAGTAGT 58.378 45.455 24.41 0.00 44.30 2.73
442 443 4.612486 CGATCATCACGTGAGATGGAGTAG 60.612 50.000 24.41 9.72 44.30 2.57
443 444 3.251004 CGATCATCACGTGAGATGGAGTA 59.749 47.826 24.41 2.74 44.30 2.59
444 445 2.033927 CGATCATCACGTGAGATGGAGT 59.966 50.000 24.41 8.11 44.30 3.85
445 446 2.606551 CCGATCATCACGTGAGATGGAG 60.607 54.545 26.12 19.00 44.30 3.86
446 447 1.338020 CCGATCATCACGTGAGATGGA 59.662 52.381 26.12 20.22 44.30 3.41
447 448 1.338020 TCCGATCATCACGTGAGATGG 59.662 52.381 24.41 22.63 44.30 3.51
448 449 2.223572 TGTCCGATCATCACGTGAGATG 60.224 50.000 24.41 17.82 45.28 2.90
449 450 2.024414 TGTCCGATCATCACGTGAGAT 58.976 47.619 24.41 23.15 40.92 2.75
450 451 1.459450 TGTCCGATCATCACGTGAGA 58.541 50.000 24.41 19.81 40.92 3.27
451 452 2.498807 ATGTCCGATCATCACGTGAG 57.501 50.000 24.41 15.36 40.92 3.51
452 453 2.539476 CAATGTCCGATCATCACGTGA 58.461 47.619 22.48 22.48 42.06 4.35
453 454 1.004610 GCAATGTCCGATCATCACGTG 60.005 52.381 9.94 9.94 0.00 4.49
454 455 1.134699 AGCAATGTCCGATCATCACGT 60.135 47.619 0.00 0.00 0.00 4.49
455 456 1.575244 AGCAATGTCCGATCATCACG 58.425 50.000 0.00 0.00 0.00 4.35
456 457 3.871006 TGTAAGCAATGTCCGATCATCAC 59.129 43.478 0.00 0.00 0.00 3.06
457 458 4.135747 TGTAAGCAATGTCCGATCATCA 57.864 40.909 0.00 0.00 0.00 3.07
458 459 5.679734 AATGTAAGCAATGTCCGATCATC 57.320 39.130 0.00 0.00 0.00 2.92
459 460 5.734220 GCAAATGTAAGCAATGTCCGATCAT 60.734 40.000 0.00 0.00 0.00 2.45
460 461 4.438608 GCAAATGTAAGCAATGTCCGATCA 60.439 41.667 0.00 0.00 0.00 2.92
461 462 4.037690 GCAAATGTAAGCAATGTCCGATC 58.962 43.478 0.00 0.00 0.00 3.69
462 463 3.696051 AGCAAATGTAAGCAATGTCCGAT 59.304 39.130 0.00 0.00 0.00 4.18
463 464 3.081061 AGCAAATGTAAGCAATGTCCGA 58.919 40.909 0.00 0.00 0.00 4.55
464 465 3.173599 CAGCAAATGTAAGCAATGTCCG 58.826 45.455 0.00 0.00 0.00 4.79
465 466 4.178545 ACAGCAAATGTAAGCAATGTCC 57.821 40.909 0.00 0.00 41.60 4.02
466 467 7.329226 ACATTAACAGCAAATGTAAGCAATGTC 59.671 33.333 0.00 0.00 43.84 3.06
467 468 7.116662 CACATTAACAGCAAATGTAAGCAATGT 59.883 33.333 1.46 0.00 43.84 2.71
468 469 7.116662 ACACATTAACAGCAAATGTAAGCAATG 59.883 33.333 1.46 0.00 43.84 2.82
469 470 7.116662 CACACATTAACAGCAAATGTAAGCAAT 59.883 33.333 1.46 0.00 43.84 3.56
470 471 6.420306 CACACATTAACAGCAAATGTAAGCAA 59.580 34.615 1.46 0.00 43.84 3.91
478 479 6.594788 AGGATTCACACATTAACAGCAAAT 57.405 33.333 0.00 0.00 0.00 2.32
486 487 7.014905 AGGCTACGTATAGGATTCACACATTAA 59.985 37.037 0.00 0.00 0.00 1.40
500 507 5.064452 CCCACGATAACTAGGCTACGTATAG 59.936 48.000 6.78 0.00 32.89 1.31
505 512 1.268899 CCCCACGATAACTAGGCTACG 59.731 57.143 0.00 0.00 0.00 3.51
571 589 1.134310 TGCTAGTGACCCATGCATCAG 60.134 52.381 0.00 0.00 0.00 2.90
581 599 1.265905 CGGTTTTGGTTGCTAGTGACC 59.734 52.381 9.07 9.07 36.45 4.02
642 667 1.247567 CCACTCAAACCATGGTGTCC 58.752 55.000 20.60 0.00 31.89 4.02
751 778 8.177119 AGGATTGCTAGAAACAAAACATGTAA 57.823 30.769 0.00 0.00 42.99 2.41
753 780 6.491403 AGAGGATTGCTAGAAACAAAACATGT 59.509 34.615 0.00 0.00 46.82 3.21
759 786 4.083324 CGCAAGAGGATTGCTAGAAACAAA 60.083 41.667 10.51 0.00 42.87 2.83
775 802 3.466836 TGCCTCCAAATATACGCAAGAG 58.533 45.455 0.00 0.00 43.62 2.85
796 824 2.396601 CAATGCAAATAATCGCCGCAT 58.603 42.857 0.00 0.00 44.84 4.73
884 916 6.642733 AAATCTTATGACCCTTTGAGGAGA 57.357 37.500 0.00 0.00 37.67 3.71
885 917 8.435982 AGATAAATCTTATGACCCTTTGAGGAG 58.564 37.037 0.00 0.00 32.79 3.69
1031 3820 2.782922 TGGGTTATAGCTTGGGGATGA 58.217 47.619 0.00 0.00 0.00 2.92
1158 3950 4.020218 TGTTGAGGCTAGCAATTAGTGAGT 60.020 41.667 18.24 0.00 0.00 3.41
1165 3957 2.558359 GTTGGTGTTGAGGCTAGCAATT 59.442 45.455 18.24 0.58 34.78 2.32
1174 3966 4.947645 ACATGATTTTGTTGGTGTTGAGG 58.052 39.130 0.00 0.00 0.00 3.86
1201 3993 4.438148 TCTTGTTCTTGTCATCGTTGTCA 58.562 39.130 0.00 0.00 0.00 3.58
1228 4020 6.550938 TGGAGAGAATTCATGATGTAGTGT 57.449 37.500 8.44 0.00 0.00 3.55
1229 4021 6.073167 GCATGGAGAGAATTCATGATGTAGTG 60.073 42.308 8.44 0.00 40.28 2.74
1263 4055 7.781324 ATTACCTGTTTCATGGTCTTTGAAT 57.219 32.000 0.00 0.00 37.74 2.57
1332 4124 0.178831 AACATTGGTCCCCTCCCTCT 60.179 55.000 0.00 0.00 0.00 3.69
1346 4138 1.989586 TGGGCTACCACCAGTAACATT 59.010 47.619 0.00 0.00 43.37 2.71
1381 4173 1.064952 CCGTTGACAGGGTCACAAAAC 59.935 52.381 0.00 0.00 42.60 2.43
1407 4199 0.741915 CTCCTCCTTCGGTAGCTCAC 59.258 60.000 0.00 0.00 0.00 3.51
1499 4300 4.371624 TGTCCATGATTGTTGTCTCCTT 57.628 40.909 0.00 0.00 0.00 3.36
1547 4352 2.232452 CCGTGATCCTCATATCCTCCAC 59.768 54.545 0.00 0.00 0.00 4.02
1793 4607 4.580167 ACAAACATAAGCTGCTGTTCTCAA 59.420 37.500 1.35 0.00 34.61 3.02
1895 4712 3.260884 TCACCCTCTTGTACCTCAATGTC 59.739 47.826 0.00 0.00 35.35 3.06
1914 4731 2.702478 TCATCCATGGTCATCTCCTCAC 59.298 50.000 12.58 0.00 0.00 3.51
1999 4834 6.207417 CCATTTTGTTCTTGTCTACCATCACT 59.793 38.462 0.00 0.00 0.00 3.41
2206 5061 7.703621 ACATTTAGTGAAGTGCAATATCATTGC 59.296 33.333 15.28 15.28 45.11 3.56
2223 5084 9.089601 TGTAAACGTCCATGTATACATTTAGTG 57.910 33.333 15.85 6.06 33.61 2.74
2347 5221 6.431722 TGGCCTATTTAACTGCCTTTCTATT 58.568 36.000 3.32 0.00 44.32 1.73
2530 5415 5.918608 ACGGGATAGATTGCATGTATATCC 58.081 41.667 18.22 18.22 40.71 2.59
2576 5461 2.812358 ACGACTACAGCAACACATGA 57.188 45.000 0.00 0.00 0.00 3.07
2653 5538 3.930336 ACTGAAAGATGAATCGTGCAGA 58.070 40.909 17.86 0.00 42.42 4.26
2715 5600 4.026052 CCAGCCCATAAAGAAATGACCTT 58.974 43.478 0.00 0.00 0.00 3.50
2747 5632 0.872388 GTTTTTCCAGTCGCCACGAT 59.128 50.000 0.00 0.00 38.42 3.73
2791 5676 1.073763 TGAAACATGGACAGGGGTCTG 59.926 52.381 0.00 0.00 43.77 3.51
2805 5690 2.975732 TTTGTGCATGGCTTGAAACA 57.024 40.000 4.32 5.07 0.00 2.83
2864 5749 5.353956 ACATCATTGATGCTGTAACGCTTTA 59.646 36.000 23.43 0.00 43.15 1.85
3470 6418 3.275143 CAACAATCAGGGCCACGTATTA 58.725 45.455 6.18 0.00 0.00 0.98
3525 6474 3.149196 TCCTGTGCTTTTTCATGAGGTC 58.851 45.455 0.00 0.00 0.00 3.85
3529 6478 6.349611 GCTAAGATTCCTGTGCTTTTTCATGA 60.350 38.462 0.00 0.00 0.00 3.07
3620 6569 8.275758 AGTAGGATCTGACTATCAAGTAGAACA 58.724 37.037 0.00 0.00 35.56 3.18
3720 6674 7.535139 GCAACATAGTAACACCACACAATATT 58.465 34.615 0.00 0.00 0.00 1.28
3968 6934 0.544833 TGCCAATTGTGCCCCTGATT 60.545 50.000 13.99 0.00 0.00 2.57
4075 7041 2.166907 TTTCTTCTTTTGGCCACCCA 57.833 45.000 3.88 0.00 40.06 4.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.