Multiple sequence alignment - TraesCS7D01G133800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G133800 chr7D 100.000 4025 0 0 1 4025 84985128 84989152 0.000000e+00 7433
1 TraesCS7D01G133800 chr7D 81.347 193 24 7 3596 3786 84995308 84995490 3.240000e-31 147
2 TraesCS7D01G133800 chr7B 94.042 3340 115 33 719 4023 34609757 34613047 0.000000e+00 4988
3 TraesCS7D01G133800 chr7B 93.051 590 38 2 3438 4025 34619994 34620582 0.000000e+00 859
4 TraesCS7D01G133800 chr7B 95.842 457 17 2 3443 3897 34615685 34616141 0.000000e+00 737
5 TraesCS7D01G133800 chr7B 94.295 298 15 2 330 625 460381389 460381686 4.740000e-124 455
6 TraesCS7D01G133800 chr7B 81.602 337 33 7 3596 3903 34645669 34646005 6.680000e-63 252
7 TraesCS7D01G133800 chr7B 87.261 157 15 4 3864 4016 34646008 34646163 1.490000e-39 174
8 TraesCS7D01G133800 chr7B 88.333 120 4 4 3908 4025 34616560 34616671 7.020000e-28 135
9 TraesCS7D01G133800 chr7A 95.471 3069 102 15 781 3827 86047976 86051029 0.000000e+00 4863
10 TraesCS7D01G133800 chr7A 86.907 443 45 6 3596 4025 86069738 86070180 6.050000e-133 484
11 TraesCS7D01G133800 chr7A 96.078 153 4 1 3875 4025 86051024 86051176 8.640000e-62 248
12 TraesCS7D01G133800 chr7A 81.641 256 28 13 22 273 86046920 86047160 1.140000e-45 195
13 TraesCS7D01G133800 chr2B 77.863 2096 372 61 991 3028 418948054 418950115 0.000000e+00 1216
14 TraesCS7D01G133800 chr2B 96.167 287 10 1 340 625 111009127 111009413 6.090000e-128 468
15 TraesCS7D01G133800 chr2D 77.498 2142 382 67 990 3067 352704137 352706242 0.000000e+00 1194
16 TraesCS7D01G133800 chr2D 95.804 286 10 2 342 626 540821510 540821226 1.020000e-125 460
17 TraesCS7D01G133800 chr2D 95.222 293 11 3 340 629 590369245 590369537 1.020000e-125 460
18 TraesCS7D01G133800 chr2A 77.439 2132 384 65 991 3067 470639086 470641175 0.000000e+00 1182
19 TraesCS7D01G133800 chr5D 96.259 294 9 2 335 626 450609059 450608766 7.820000e-132 481
20 TraesCS7D01G133800 chr5D 95.833 288 11 1 339 626 430510504 430510218 7.880000e-127 464
21 TraesCS7D01G133800 chr5D 95.819 287 10 2 340 625 545532652 545532367 2.830000e-126 462
22 TraesCS7D01G133800 chr4A 96.809 282 9 0 342 623 11843044 11842763 4.710000e-129 472
23 TraesCS7D01G133800 chr3B 94.881 293 13 2 337 629 733258168 733258458 1.320000e-124 457
24 TraesCS7D01G133800 chr3B 85.075 134 17 3 1046 1177 710581448 710581580 2.520000e-27 134
25 TraesCS7D01G133800 chr3D 85.821 134 16 3 1046 1177 537139268 537139400 5.420000e-29 139
26 TraesCS7D01G133800 chr3A 85.821 134 16 3 1046 1177 672545026 672545158 5.420000e-29 139


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G133800 chr7D 84985128 84989152 4024 False 7433.000000 7433 100.000000 1 4025 1 chr7D.!!$F1 4024
1 TraesCS7D01G133800 chr7B 34609757 34620582 10825 False 1679.750000 4988 92.817000 719 4025 4 chr7B.!!$F2 3306
2 TraesCS7D01G133800 chr7A 86046920 86051176 4256 False 1768.666667 4863 91.063333 22 4025 3 chr7A.!!$F2 4003
3 TraesCS7D01G133800 chr2B 418948054 418950115 2061 False 1216.000000 1216 77.863000 991 3028 1 chr2B.!!$F2 2037
4 TraesCS7D01G133800 chr2D 352704137 352706242 2105 False 1194.000000 1194 77.498000 990 3067 1 chr2D.!!$F1 2077
5 TraesCS7D01G133800 chr2A 470639086 470641175 2089 False 1182.000000 1182 77.439000 991 3067 1 chr2A.!!$F1 2076

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
298 302 0.382158 TGCTAGCTCTCAATCGACCG 59.618 55.000 17.23 0.00 0.0 4.79 F
299 303 0.663688 GCTAGCTCTCAATCGACCGA 59.336 55.000 7.70 0.00 0.0 4.69 F
302 306 0.736053 AGCTCTCAATCGACCGAGAC 59.264 55.000 10.75 8.63 34.6 3.36 F
303 307 0.736053 GCTCTCAATCGACCGAGACT 59.264 55.000 10.75 0.00 34.6 3.24 F
637 641 1.141053 GGGCCTTACATTGAGATCCGT 59.859 52.381 0.84 0.00 0.0 4.69 F
639 643 1.599542 GCCTTACATTGAGATCCGTGC 59.400 52.381 0.00 0.00 0.0 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1821 2646 1.621301 CGTTGAGCTGCTTCCACTCG 61.621 60.000 2.53 2.57 32.98 4.18 R
2226 3051 2.361610 CCAGCCGTCATTGCCCTT 60.362 61.111 0.00 0.00 0.00 3.95 R
2364 3189 3.378742 CCGTATCCTGATCCTTATCCTCG 59.621 52.174 0.00 0.00 0.00 4.63 R
2664 3492 1.757118 CCACTCCCATGTACATCGTCT 59.243 52.381 5.07 0.00 0.00 4.18 R
2997 3825 0.895530 TTCTCCTAGAGTGGTTGGCG 59.104 55.000 0.00 0.00 0.00 5.69 R
3085 3914 4.501071 ACAGATACCGTGTGTATGGAAAC 58.499 43.478 0.00 0.00 40.31 2.78 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.492102 TGAACCAGGTTTTCCAGAGAG 57.508 47.619 6.21 0.00 43.73 3.20
21 22 3.045634 TGAACCAGGTTTTCCAGAGAGA 58.954 45.455 6.21 0.00 43.73 3.10
22 23 3.071602 TGAACCAGGTTTTCCAGAGAGAG 59.928 47.826 6.21 0.00 43.73 3.20
23 24 2.977808 ACCAGGTTTTCCAGAGAGAGA 58.022 47.619 0.00 0.00 43.73 3.10
24 25 2.903135 ACCAGGTTTTCCAGAGAGAGAG 59.097 50.000 0.00 0.00 43.73 3.20
25 26 3.169099 CCAGGTTTTCCAGAGAGAGAGA 58.831 50.000 0.00 0.00 43.73 3.10
26 27 3.195396 CCAGGTTTTCCAGAGAGAGAGAG 59.805 52.174 0.00 0.00 43.73 3.20
27 28 3.831911 CAGGTTTTCCAGAGAGAGAGAGT 59.168 47.826 0.00 0.00 43.73 3.24
28 29 3.831911 AGGTTTTCCAGAGAGAGAGAGTG 59.168 47.826 0.00 0.00 43.73 3.51
29 30 3.829601 GGTTTTCCAGAGAGAGAGAGTGA 59.170 47.826 0.00 0.00 40.31 3.41
30 31 4.082245 GGTTTTCCAGAGAGAGAGAGTGAG 60.082 50.000 0.00 0.00 40.31 3.51
32 33 3.912496 TCCAGAGAGAGAGAGTGAGAG 57.088 52.381 0.00 0.00 0.00 3.20
35 36 4.288366 TCCAGAGAGAGAGAGTGAGAGAAA 59.712 45.833 0.00 0.00 0.00 2.52
38 39 5.122869 CAGAGAGAGAGAGTGAGAGAAACAG 59.877 48.000 0.00 0.00 0.00 3.16
44 45 5.136828 AGAGAGTGAGAGAAACAGACTCAA 58.863 41.667 0.00 0.00 41.31 3.02
49 50 5.070981 AGTGAGAGAAACAGACTCAATCCAA 59.929 40.000 0.00 0.00 41.31 3.53
52 53 5.874093 AGAGAAACAGACTCAATCCAACAT 58.126 37.500 0.00 0.00 36.91 2.71
83 85 0.533755 GCCTACTGCCATGCCTAGTG 60.534 60.000 5.35 0.00 0.00 2.74
85 87 1.486310 CCTACTGCCATGCCTAGTGAA 59.514 52.381 5.35 0.00 0.00 3.18
91 93 2.224744 TGCCATGCCTAGTGAAAACTCA 60.225 45.455 0.00 0.00 0.00 3.41
94 96 4.082026 GCCATGCCTAGTGAAAACTCATTT 60.082 41.667 0.00 0.00 0.00 2.32
96 98 5.416952 CCATGCCTAGTGAAAACTCATTTCT 59.583 40.000 2.98 0.00 46.27 2.52
98 100 5.620206 TGCCTAGTGAAAACTCATTTCTGA 58.380 37.500 2.98 0.00 46.27 3.27
127 129 3.625853 TCCAATGGGATAAAATGCGTGA 58.374 40.909 0.00 0.00 38.64 4.35
132 134 5.596836 ATGGGATAAAATGCGTGACAAAT 57.403 34.783 0.00 0.00 0.00 2.32
141 143 7.475771 AAAATGCGTGACAAATGTGTAAAAT 57.524 28.000 0.00 0.00 38.41 1.82
142 144 6.450845 AATGCGTGACAAATGTGTAAAATG 57.549 33.333 0.00 0.00 38.41 2.32
143 145 4.294232 TGCGTGACAAATGTGTAAAATGG 58.706 39.130 0.00 0.00 38.41 3.16
144 146 3.672867 GCGTGACAAATGTGTAAAATGGG 59.327 43.478 0.00 0.00 38.41 4.00
145 147 4.233789 CGTGACAAATGTGTAAAATGGGG 58.766 43.478 0.00 0.00 38.41 4.96
146 148 4.565022 GTGACAAATGTGTAAAATGGGGG 58.435 43.478 0.00 0.00 38.41 5.40
147 149 4.039852 GTGACAAATGTGTAAAATGGGGGT 59.960 41.667 0.00 0.00 38.41 4.95
148 150 5.244178 GTGACAAATGTGTAAAATGGGGGTA 59.756 40.000 0.00 0.00 38.41 3.69
149 151 6.019748 TGACAAATGTGTAAAATGGGGGTAT 58.980 36.000 0.00 0.00 38.41 2.73
150 152 7.122948 GTGACAAATGTGTAAAATGGGGGTATA 59.877 37.037 0.00 0.00 38.41 1.47
151 153 7.674348 TGACAAATGTGTAAAATGGGGGTATAA 59.326 33.333 0.00 0.00 38.41 0.98
152 154 8.437274 ACAAATGTGTAAAATGGGGGTATAAA 57.563 30.769 0.00 0.00 35.72 1.40
153 155 9.052365 ACAAATGTGTAAAATGGGGGTATAAAT 57.948 29.630 0.00 0.00 35.72 1.40
183 185 7.189079 ACTTTCTCAAAAATGGGTAAAACCA 57.811 32.000 0.00 0.00 46.24 3.67
185 187 6.800072 TTCTCAAAAATGGGTAAAACCAGT 57.200 33.333 0.00 0.00 45.20 4.00
189 191 6.947464 TCAAAAATGGGTAAAACCAGTCAAA 58.053 32.000 0.00 0.00 45.20 2.69
211 213 7.236432 TCAAATTGATGAATCTTGGGGGTAAAA 59.764 33.333 0.00 0.00 0.00 1.52
220 222 5.753721 TCTTGGGGGTAAAAATGGAATTG 57.246 39.130 0.00 0.00 36.10 2.32
224 226 6.710499 TGGGGGTAAAAATGGAATTGATTT 57.290 33.333 0.00 0.00 36.10 2.17
268 272 9.761504 AGCATCTCATATCCGATAATTATCAAG 57.238 33.333 22.22 14.07 32.98 3.02
269 273 9.755804 GCATCTCATATCCGATAATTATCAAGA 57.244 33.333 22.22 18.06 32.98 3.02
275 279 9.973246 CATATCCGATAATTATCAAGAAAACGG 57.027 33.333 22.22 15.95 38.31 4.44
276 280 6.854496 TCCGATAATTATCAAGAAAACGGG 57.146 37.500 22.22 12.98 37.69 5.28
277 281 6.584488 TCCGATAATTATCAAGAAAACGGGA 58.416 36.000 22.22 14.70 37.69 5.14
278 282 7.221450 TCCGATAATTATCAAGAAAACGGGAT 58.779 34.615 22.22 0.00 37.69 3.85
279 283 7.717875 TCCGATAATTATCAAGAAAACGGGATT 59.282 33.333 22.22 0.00 37.69 3.01
280 284 7.803189 CCGATAATTATCAAGAAAACGGGATTG 59.197 37.037 22.22 3.41 34.27 2.67
281 285 7.323656 CGATAATTATCAAGAAAACGGGATTGC 59.676 37.037 22.22 0.00 32.98 3.56
282 286 6.530019 AATTATCAAGAAAACGGGATTGCT 57.470 33.333 0.00 0.00 0.00 3.91
283 287 7.639113 AATTATCAAGAAAACGGGATTGCTA 57.361 32.000 0.00 0.00 0.00 3.49
284 288 6.677781 TTATCAAGAAAACGGGATTGCTAG 57.322 37.500 0.00 0.00 0.00 3.42
285 289 2.747446 TCAAGAAAACGGGATTGCTAGC 59.253 45.455 8.10 8.10 0.00 3.42
286 290 2.749621 CAAGAAAACGGGATTGCTAGCT 59.250 45.455 17.23 0.00 0.00 3.32
287 291 2.633488 AGAAAACGGGATTGCTAGCTC 58.367 47.619 17.23 5.81 0.00 4.09
288 292 2.237392 AGAAAACGGGATTGCTAGCTCT 59.763 45.455 17.23 3.06 0.00 4.09
289 293 2.317530 AAACGGGATTGCTAGCTCTC 57.682 50.000 17.23 11.98 0.00 3.20
290 294 1.195115 AACGGGATTGCTAGCTCTCA 58.805 50.000 17.23 0.00 0.00 3.27
291 295 1.195115 ACGGGATTGCTAGCTCTCAA 58.805 50.000 17.23 1.49 0.00 3.02
292 296 1.765314 ACGGGATTGCTAGCTCTCAAT 59.235 47.619 17.23 7.01 35.79 2.57
293 297 2.224161 ACGGGATTGCTAGCTCTCAATC 60.224 50.000 22.72 22.72 44.64 2.67
294 298 2.411904 GGGATTGCTAGCTCTCAATCG 58.588 52.381 23.34 0.00 45.69 3.34
295 299 2.036475 GGGATTGCTAGCTCTCAATCGA 59.964 50.000 23.34 0.00 45.69 3.59
296 300 3.056304 GGATTGCTAGCTCTCAATCGAC 58.944 50.000 23.34 13.61 45.69 4.20
297 301 2.586258 TTGCTAGCTCTCAATCGACC 57.414 50.000 17.23 0.00 0.00 4.79
298 302 0.382158 TGCTAGCTCTCAATCGACCG 59.618 55.000 17.23 0.00 0.00 4.79
299 303 0.663688 GCTAGCTCTCAATCGACCGA 59.336 55.000 7.70 0.00 0.00 4.69
300 304 1.334599 GCTAGCTCTCAATCGACCGAG 60.335 57.143 7.70 6.59 0.00 4.63
301 305 2.214347 CTAGCTCTCAATCGACCGAGA 58.786 52.381 13.42 13.42 36.81 4.04
302 306 0.736053 AGCTCTCAATCGACCGAGAC 59.264 55.000 10.75 8.63 34.60 3.36
303 307 0.736053 GCTCTCAATCGACCGAGACT 59.264 55.000 10.75 0.00 34.60 3.24
304 308 1.941294 GCTCTCAATCGACCGAGACTA 59.059 52.381 10.75 0.00 34.60 2.59
305 309 2.355132 GCTCTCAATCGACCGAGACTAA 59.645 50.000 10.75 0.00 34.60 2.24
306 310 3.789459 GCTCTCAATCGACCGAGACTAAC 60.789 52.174 10.75 0.18 34.60 2.34
307 311 2.681848 TCTCAATCGACCGAGACTAACC 59.318 50.000 10.75 0.00 33.37 2.85
308 312 2.422479 CTCAATCGACCGAGACTAACCA 59.578 50.000 7.04 0.00 0.00 3.67
309 313 2.821378 TCAATCGACCGAGACTAACCAA 59.179 45.455 0.00 0.00 0.00 3.67
310 314 3.119602 TCAATCGACCGAGACTAACCAAG 60.120 47.826 0.00 0.00 0.00 3.61
311 315 1.901591 TCGACCGAGACTAACCAAGT 58.098 50.000 0.00 0.00 42.80 3.16
322 326 4.442375 ACTAACCAAGTCTCAGTCGATG 57.558 45.455 0.00 0.00 30.33 3.84
323 327 4.079970 ACTAACCAAGTCTCAGTCGATGA 58.920 43.478 0.00 0.00 30.33 2.92
324 328 4.707448 ACTAACCAAGTCTCAGTCGATGAT 59.293 41.667 0.00 0.00 37.28 2.45
325 329 5.886474 ACTAACCAAGTCTCAGTCGATGATA 59.114 40.000 0.00 0.00 37.28 2.15
326 330 5.860941 AACCAAGTCTCAGTCGATGATAT 57.139 39.130 0.00 0.00 37.28 1.63
327 331 6.961360 AACCAAGTCTCAGTCGATGATATA 57.039 37.500 0.00 0.00 37.28 0.86
328 332 7.531857 AACCAAGTCTCAGTCGATGATATAT 57.468 36.000 0.00 0.00 37.28 0.86
329 333 7.531857 ACCAAGTCTCAGTCGATGATATATT 57.468 36.000 0.00 0.00 37.28 1.28
330 334 8.637196 ACCAAGTCTCAGTCGATGATATATTA 57.363 34.615 0.00 0.00 37.28 0.98
331 335 9.078990 ACCAAGTCTCAGTCGATGATATATTAA 57.921 33.333 0.00 0.00 37.28 1.40
356 360 8.794335 ATAGGATCTTAGAGGTTGTTTGTTTC 57.206 34.615 0.00 0.00 0.00 2.78
357 361 6.004574 AGGATCTTAGAGGTTGTTTGTTTCC 58.995 40.000 0.00 0.00 0.00 3.13
358 362 5.768164 GGATCTTAGAGGTTGTTTGTTTCCA 59.232 40.000 0.00 0.00 0.00 3.53
359 363 6.072452 GGATCTTAGAGGTTGTTTGTTTCCAG 60.072 42.308 0.00 0.00 0.00 3.86
360 364 5.130350 TCTTAGAGGTTGTTTGTTTCCAGG 58.870 41.667 0.00 0.00 0.00 4.45
361 365 3.662759 AGAGGTTGTTTGTTTCCAGGA 57.337 42.857 0.00 0.00 0.00 3.86
362 366 3.976015 AGAGGTTGTTTGTTTCCAGGAA 58.024 40.909 0.00 0.00 0.00 3.36
363 367 3.699538 AGAGGTTGTTTGTTTCCAGGAAC 59.300 43.478 0.00 0.00 0.00 3.62
364 368 3.699538 GAGGTTGTTTGTTTCCAGGAACT 59.300 43.478 0.00 0.00 43.88 3.01
365 369 4.093743 AGGTTGTTTGTTTCCAGGAACTT 58.906 39.130 0.00 0.00 34.60 2.66
366 370 5.265989 AGGTTGTTTGTTTCCAGGAACTTA 58.734 37.500 0.00 0.00 34.60 2.24
367 371 5.897250 AGGTTGTTTGTTTCCAGGAACTTAT 59.103 36.000 0.00 0.00 34.60 1.73
368 372 6.382859 AGGTTGTTTGTTTCCAGGAACTTATT 59.617 34.615 0.00 0.00 34.60 1.40
369 373 6.478673 GGTTGTTTGTTTCCAGGAACTTATTG 59.521 38.462 0.00 0.00 34.60 1.90
370 374 6.155475 TGTTTGTTTCCAGGAACTTATTGG 57.845 37.500 0.00 0.00 34.60 3.16
371 375 5.659079 TGTTTGTTTCCAGGAACTTATTGGT 59.341 36.000 0.00 0.00 34.60 3.67
372 376 6.155393 TGTTTGTTTCCAGGAACTTATTGGTT 59.845 34.615 0.00 0.00 34.60 3.67
373 377 6.800072 TTGTTTCCAGGAACTTATTGGTTT 57.200 33.333 0.00 0.00 34.60 3.27
374 378 7.899648 TTGTTTCCAGGAACTTATTGGTTTA 57.100 32.000 0.00 0.00 34.60 2.01
375 379 7.519032 TGTTTCCAGGAACTTATTGGTTTAG 57.481 36.000 0.00 0.00 34.60 1.85
376 380 6.492087 TGTTTCCAGGAACTTATTGGTTTAGG 59.508 38.462 0.00 0.00 34.60 2.69
377 381 5.187621 TCCAGGAACTTATTGGTTTAGGG 57.812 43.478 0.00 0.00 34.60 3.53
378 382 4.853276 TCCAGGAACTTATTGGTTTAGGGA 59.147 41.667 0.00 0.00 34.60 4.20
379 383 4.948004 CCAGGAACTTATTGGTTTAGGGAC 59.052 45.833 0.00 0.00 34.60 4.46
380 384 5.281037 CCAGGAACTTATTGGTTTAGGGACT 60.281 44.000 0.00 0.00 39.39 3.85
381 385 6.246163 CAGGAACTTATTGGTTTAGGGACTT 58.754 40.000 0.00 0.00 36.39 3.01
382 386 7.399634 CAGGAACTTATTGGTTTAGGGACTTA 58.600 38.462 0.00 0.00 36.39 2.24
383 387 7.886446 CAGGAACTTATTGGTTTAGGGACTTAA 59.114 37.037 0.00 0.00 36.39 1.85
384 388 8.450434 AGGAACTTATTGGTTTAGGGACTTAAA 58.550 33.333 0.00 0.00 34.75 1.52
385 389 9.081204 GGAACTTATTGGTTTAGGGACTTAAAA 57.919 33.333 0.00 0.00 41.75 1.52
406 410 6.910259 AAAAAGTCCCTATAAGTCCCATCT 57.090 37.500 0.00 0.00 0.00 2.90
408 412 8.401955 AAAAAGTCCCTATAAGTCCCATCTAA 57.598 34.615 0.00 0.00 0.00 2.10
409 413 8.401955 AAAAGTCCCTATAAGTCCCATCTAAA 57.598 34.615 0.00 0.00 0.00 1.85
410 414 6.997942 AGTCCCTATAAGTCCCATCTAAAC 57.002 41.667 0.00 0.00 0.00 2.01
411 415 5.845065 AGTCCCTATAAGTCCCATCTAAACC 59.155 44.000 0.00 0.00 0.00 3.27
412 416 5.605488 GTCCCTATAAGTCCCATCTAAACCA 59.395 44.000 0.00 0.00 0.00 3.67
413 417 6.100714 GTCCCTATAAGTCCCATCTAAACCAA 59.899 42.308 0.00 0.00 0.00 3.67
414 418 6.679303 TCCCTATAAGTCCCATCTAAACCAAA 59.321 38.462 0.00 0.00 0.00 3.28
415 419 7.352522 TCCCTATAAGTCCCATCTAAACCAAAT 59.647 37.037 0.00 0.00 0.00 2.32
416 420 8.665906 CCCTATAAGTCCCATCTAAACCAAATA 58.334 37.037 0.00 0.00 0.00 1.40
417 421 9.726438 CCTATAAGTCCCATCTAAACCAAATAG 57.274 37.037 0.00 0.00 0.00 1.73
418 422 9.726438 CTATAAGTCCCATCTAAACCAAATAGG 57.274 37.037 0.00 0.00 45.67 2.57
419 423 6.652205 AAGTCCCATCTAAACCAAATAGGA 57.348 37.500 0.00 0.00 41.22 2.94
420 424 6.253946 AGTCCCATCTAAACCAAATAGGAG 57.746 41.667 0.00 0.00 41.22 3.69
421 425 5.132816 AGTCCCATCTAAACCAAATAGGAGG 59.867 44.000 0.00 0.00 41.22 4.30
422 426 4.415512 TCCCATCTAAACCAAATAGGAGGG 59.584 45.833 0.00 0.00 41.22 4.30
423 427 4.415512 CCCATCTAAACCAAATAGGAGGGA 59.584 45.833 0.00 0.00 41.22 4.20
424 428 5.377478 CCATCTAAACCAAATAGGAGGGAC 58.623 45.833 0.00 0.00 41.22 4.46
426 430 6.353951 CCATCTAAACCAAATAGGAGGGACTT 60.354 42.308 0.00 0.00 41.55 3.01
427 431 7.147373 CCATCTAAACCAAATAGGAGGGACTTA 60.147 40.741 0.00 0.00 41.55 2.24
428 432 8.440771 CATCTAAACCAAATAGGAGGGACTTAT 58.559 37.037 0.00 0.00 41.55 1.73
429 433 9.684702 ATCTAAACCAAATAGGAGGGACTTATA 57.315 33.333 0.00 0.00 41.55 0.98
430 434 9.155785 TCTAAACCAAATAGGAGGGACTTATAG 57.844 37.037 0.00 0.00 41.55 1.31
431 435 6.765355 AACCAAATAGGAGGGACTTATAGG 57.235 41.667 0.00 0.00 41.55 2.57
432 436 5.163390 ACCAAATAGGAGGGACTTATAGGG 58.837 45.833 0.00 0.00 41.55 3.53
433 437 5.102346 ACCAAATAGGAGGGACTTATAGGGA 60.102 44.000 0.00 0.00 41.55 4.20
434 438 5.248705 CCAAATAGGAGGGACTTATAGGGAC 59.751 48.000 0.00 0.00 41.55 4.46
435 439 5.970692 AATAGGAGGGACTTATAGGGACT 57.029 43.478 0.00 0.00 41.55 3.85
436 440 5.970692 ATAGGAGGGACTTATAGGGACTT 57.029 43.478 0.00 0.00 41.55 3.01
437 441 7.431936 AATAGGAGGGACTTATAGGGACTTA 57.568 40.000 0.00 0.00 41.55 2.24
438 442 5.763239 AGGAGGGACTTATAGGGACTTAA 57.237 43.478 0.00 0.00 41.55 1.85
439 443 6.114151 AGGAGGGACTTATAGGGACTTAAA 57.886 41.667 0.00 0.00 41.55 1.52
440 444 6.144625 AGGAGGGACTTATAGGGACTTAAAG 58.855 44.000 0.00 0.00 41.55 1.85
441 445 5.904169 GGAGGGACTTATAGGGACTTAAAGT 59.096 44.000 0.00 0.00 42.31 2.66
442 446 6.183360 GGAGGGACTTATAGGGACTTAAAGTG 60.183 46.154 0.00 0.00 40.60 3.16
443 447 6.509386 AGGGACTTATAGGGACTTAAAGTGA 58.491 40.000 0.00 0.00 40.60 3.41
444 448 6.612049 AGGGACTTATAGGGACTTAAAGTGAG 59.388 42.308 0.00 0.00 40.60 3.51
445 449 6.282167 GGACTTATAGGGACTTAAAGTGAGC 58.718 44.000 0.00 0.00 40.60 4.26
446 450 6.127140 GGACTTATAGGGACTTAAAGTGAGCA 60.127 42.308 0.00 0.00 40.60 4.26
447 451 7.419172 GGACTTATAGGGACTTAAAGTGAGCAT 60.419 40.741 0.00 0.00 40.60 3.79
448 452 7.862675 ACTTATAGGGACTTAAAGTGAGCATT 58.137 34.615 0.00 0.00 39.58 3.56
449 453 8.329502 ACTTATAGGGACTTAAAGTGAGCATTT 58.670 33.333 0.00 0.00 39.58 2.32
450 454 8.506168 TTATAGGGACTTAAAGTGAGCATTTG 57.494 34.615 0.00 0.00 41.75 2.32
451 455 4.082125 AGGGACTTAAAGTGAGCATTTGG 58.918 43.478 0.00 0.00 27.25 3.28
452 456 3.193479 GGGACTTAAAGTGAGCATTTGGG 59.807 47.826 0.00 0.00 0.00 4.12
453 457 4.079253 GGACTTAAAGTGAGCATTTGGGA 58.921 43.478 0.00 0.00 0.00 4.37
454 458 4.082733 GGACTTAAAGTGAGCATTTGGGAC 60.083 45.833 0.00 0.00 0.00 4.46
455 459 4.729868 ACTTAAAGTGAGCATTTGGGACT 58.270 39.130 0.00 0.00 0.00 3.85
456 460 5.140454 ACTTAAAGTGAGCATTTGGGACTT 58.860 37.500 0.00 0.00 0.00 3.01
457 461 6.303839 ACTTAAAGTGAGCATTTGGGACTTA 58.696 36.000 0.00 0.00 0.00 2.24
458 462 6.948309 ACTTAAAGTGAGCATTTGGGACTTAT 59.052 34.615 0.00 0.00 0.00 1.73
459 463 5.649782 AAAGTGAGCATTTGGGACTTATG 57.350 39.130 0.00 0.00 0.00 1.90
460 464 4.574674 AGTGAGCATTTGGGACTTATGA 57.425 40.909 0.00 0.00 0.00 2.15
461 465 4.922206 AGTGAGCATTTGGGACTTATGAA 58.078 39.130 0.00 0.00 0.00 2.57
462 466 5.324409 AGTGAGCATTTGGGACTTATGAAA 58.676 37.500 0.00 0.00 0.00 2.69
463 467 5.954150 AGTGAGCATTTGGGACTTATGAAAT 59.046 36.000 0.00 0.00 0.00 2.17
464 468 7.118723 AGTGAGCATTTGGGACTTATGAAATA 58.881 34.615 0.00 0.00 0.00 1.40
465 469 7.615365 AGTGAGCATTTGGGACTTATGAAATAA 59.385 33.333 0.00 0.00 36.20 1.40
491 495 5.996271 TCTCAAGGAGAGTCTTATAGGGA 57.004 43.478 0.00 0.00 44.98 4.20
492 496 5.697067 TCTCAAGGAGAGTCTTATAGGGAC 58.303 45.833 0.00 0.00 44.98 4.46
493 497 5.433712 TCTCAAGGAGAGTCTTATAGGGACT 59.566 44.000 9.30 9.30 45.37 3.85
494 498 6.068735 TCTCAAGGAGAGTCTTATAGGGACTT 60.069 42.308 10.43 3.61 43.13 3.01
495 499 7.129038 TCTCAAGGAGAGTCTTATAGGGACTTA 59.871 40.741 10.43 0.00 43.13 2.24
496 500 7.827787 TCAAGGAGAGTCTTATAGGGACTTAT 58.172 38.462 10.43 4.90 43.13 1.73
497 501 8.956860 TCAAGGAGAGTCTTATAGGGACTTATA 58.043 37.037 10.43 0.00 43.13 0.98
498 502 9.238368 CAAGGAGAGTCTTATAGGGACTTATAG 57.762 40.741 10.43 0.00 43.13 1.31
499 503 8.528543 AGGAGAGTCTTATAGGGACTTATAGT 57.471 38.462 10.43 0.00 43.13 2.12
500 504 8.962205 AGGAGAGTCTTATAGGGACTTATAGTT 58.038 37.037 10.43 0.00 43.13 2.24
501 505 9.016438 GGAGAGTCTTATAGGGACTTATAGTTG 57.984 40.741 10.43 0.00 43.13 3.16
502 506 9.577222 GAGAGTCTTATAGGGACTTATAGTTGT 57.423 37.037 10.43 0.00 43.13 3.32
544 548 7.074653 ACTTATAAGTCTCAGGAACCAAACA 57.925 36.000 12.50 0.00 32.86 2.83
545 549 7.162082 ACTTATAAGTCTCAGGAACCAAACAG 58.838 38.462 12.50 0.00 32.86 3.16
546 550 2.938956 AGTCTCAGGAACCAAACAGG 57.061 50.000 0.00 0.00 45.67 4.00
560 564 5.959618 CCAAACAGGTAGGGACTTTTTAG 57.040 43.478 0.00 0.00 41.75 1.85
561 565 4.765339 CCAAACAGGTAGGGACTTTTTAGG 59.235 45.833 0.00 0.00 41.75 2.69
562 566 4.652679 AACAGGTAGGGACTTTTTAGGG 57.347 45.455 0.00 0.00 41.75 3.53
563 567 3.878086 ACAGGTAGGGACTTTTTAGGGA 58.122 45.455 0.00 0.00 41.75 4.20
564 568 3.586174 ACAGGTAGGGACTTTTTAGGGAC 59.414 47.826 0.00 0.00 41.75 4.46
565 569 3.844804 CAGGTAGGGACTTTTTAGGGACT 59.155 47.826 0.00 0.00 41.75 3.85
566 570 4.288887 CAGGTAGGGACTTTTTAGGGACTT 59.711 45.833 0.00 0.00 39.49 3.01
567 571 4.288887 AGGTAGGGACTTTTTAGGGACTTG 59.711 45.833 0.00 0.00 39.49 3.16
568 572 4.287845 GGTAGGGACTTTTTAGGGACTTGA 59.712 45.833 0.00 0.00 39.49 3.02
569 573 4.642466 AGGGACTTTTTAGGGACTTGAG 57.358 45.455 0.00 0.00 34.75 3.02
570 574 4.240323 AGGGACTTTTTAGGGACTTGAGA 58.760 43.478 0.00 0.00 34.75 3.27
571 575 4.041815 AGGGACTTTTTAGGGACTTGAGAC 59.958 45.833 0.00 0.00 34.75 3.36
572 576 4.041815 GGGACTTTTTAGGGACTTGAGACT 59.958 45.833 0.00 0.00 41.75 3.24
573 577 5.456330 GGGACTTTTTAGGGACTTGAGACTT 60.456 44.000 0.00 0.00 41.75 3.01
574 578 6.239800 GGGACTTTTTAGGGACTTGAGACTTA 60.240 42.308 0.00 0.00 41.75 2.24
575 579 7.395617 GGACTTTTTAGGGACTTGAGACTTAT 58.604 38.462 0.00 0.00 41.75 1.73
576 580 8.537858 GGACTTTTTAGGGACTTGAGACTTATA 58.462 37.037 0.00 0.00 41.75 0.98
577 581 9.939802 GACTTTTTAGGGACTTGAGACTTATAA 57.060 33.333 0.00 0.00 41.75 0.98
578 582 9.945904 ACTTTTTAGGGACTTGAGACTTATAAG 57.054 33.333 11.05 11.05 41.75 1.73
579 583 9.945904 CTTTTTAGGGACTTGAGACTTATAAGT 57.054 33.333 18.05 18.05 40.66 2.24
581 585 9.720769 TTTTAGGGACTTGAGACTTATAAGTTG 57.279 33.333 18.96 9.81 38.78 3.16
582 586 6.301169 AGGGACTTGAGACTTATAAGTTGG 57.699 41.667 18.96 10.07 34.84 3.77
583 587 5.189934 AGGGACTTGAGACTTATAAGTTGGG 59.810 44.000 18.96 10.37 34.84 4.12
584 588 5.189145 GGGACTTGAGACTTATAAGTTGGGA 59.811 44.000 18.96 6.15 39.88 4.37
585 589 6.107343 GGACTTGAGACTTATAAGTTGGGAC 58.893 44.000 18.96 6.39 39.88 4.46
586 590 6.070710 GGACTTGAGACTTATAAGTTGGGACT 60.071 42.308 18.96 10.98 39.88 3.85
587 591 7.123847 GGACTTGAGACTTATAAGTTGGGACTA 59.876 40.741 18.96 6.16 39.88 2.59
588 592 8.431910 ACTTGAGACTTATAAGTTGGGACTAA 57.568 34.615 18.96 2.28 39.88 2.24
589 593 8.877195 ACTTGAGACTTATAAGTTGGGACTAAA 58.123 33.333 18.96 9.53 39.88 1.85
590 594 9.720769 CTTGAGACTTATAAGTTGGGACTAAAA 57.279 33.333 18.96 8.46 39.88 1.52
617 621 7.365840 GTCCTAAGACTTATGAACCAAACAG 57.634 40.000 2.20 0.00 40.10 3.16
618 622 6.371825 GTCCTAAGACTTATGAACCAAACAGG 59.628 42.308 2.20 0.00 40.95 4.00
619 623 5.648092 CCTAAGACTTATGAACCAAACAGGG 59.352 44.000 0.00 0.00 43.89 4.45
620 624 3.421844 AGACTTATGAACCAAACAGGGC 58.578 45.455 0.00 0.00 43.89 5.19
621 625 2.492088 GACTTATGAACCAAACAGGGCC 59.508 50.000 0.00 0.00 43.89 5.80
622 626 2.110011 ACTTATGAACCAAACAGGGCCT 59.890 45.455 0.00 0.00 43.89 5.19
623 627 2.990740 TATGAACCAAACAGGGCCTT 57.009 45.000 1.32 0.00 43.89 4.35
624 628 2.990740 ATGAACCAAACAGGGCCTTA 57.009 45.000 1.32 0.00 43.89 2.69
625 629 1.989706 TGAACCAAACAGGGCCTTAC 58.010 50.000 1.32 0.00 43.89 2.34
626 630 1.215673 TGAACCAAACAGGGCCTTACA 59.784 47.619 1.32 0.00 43.89 2.41
627 631 2.158385 TGAACCAAACAGGGCCTTACAT 60.158 45.455 1.32 0.00 43.89 2.29
628 632 2.694616 ACCAAACAGGGCCTTACATT 57.305 45.000 1.32 0.00 43.89 2.71
629 633 2.247358 ACCAAACAGGGCCTTACATTG 58.753 47.619 1.32 6.85 43.89 2.82
630 634 2.158385 ACCAAACAGGGCCTTACATTGA 60.158 45.455 1.32 0.00 43.89 2.57
631 635 2.493278 CCAAACAGGGCCTTACATTGAG 59.507 50.000 1.32 0.00 0.00 3.02
632 636 3.420893 CAAACAGGGCCTTACATTGAGA 58.579 45.455 1.32 0.00 0.00 3.27
633 637 4.019174 CAAACAGGGCCTTACATTGAGAT 58.981 43.478 1.32 0.00 0.00 2.75
634 638 3.567478 ACAGGGCCTTACATTGAGATC 57.433 47.619 1.32 0.00 0.00 2.75
635 639 2.173569 ACAGGGCCTTACATTGAGATCC 59.826 50.000 1.32 0.00 0.00 3.36
636 640 1.417890 AGGGCCTTACATTGAGATCCG 59.582 52.381 0.00 0.00 0.00 4.18
637 641 1.141053 GGGCCTTACATTGAGATCCGT 59.859 52.381 0.84 0.00 0.00 4.69
638 642 2.213499 GGCCTTACATTGAGATCCGTG 58.787 52.381 0.00 0.00 0.00 4.94
639 643 1.599542 GCCTTACATTGAGATCCGTGC 59.400 52.381 0.00 0.00 0.00 5.34
640 644 2.905075 CCTTACATTGAGATCCGTGCA 58.095 47.619 0.00 0.00 0.00 4.57
641 645 3.270027 CCTTACATTGAGATCCGTGCAA 58.730 45.455 0.00 0.00 0.00 4.08
642 646 3.689161 CCTTACATTGAGATCCGTGCAAA 59.311 43.478 0.00 0.00 0.00 3.68
643 647 4.336433 CCTTACATTGAGATCCGTGCAAAT 59.664 41.667 0.00 0.00 0.00 2.32
644 648 5.163622 CCTTACATTGAGATCCGTGCAAATT 60.164 40.000 0.00 0.00 0.00 1.82
645 649 4.789012 ACATTGAGATCCGTGCAAATTT 57.211 36.364 0.00 0.00 0.00 1.82
646 650 5.138125 ACATTGAGATCCGTGCAAATTTT 57.862 34.783 0.00 0.00 0.00 1.82
647 651 5.540911 ACATTGAGATCCGTGCAAATTTTT 58.459 33.333 0.00 0.00 0.00 1.94
648 652 5.634859 ACATTGAGATCCGTGCAAATTTTTC 59.365 36.000 0.00 0.00 0.00 2.29
649 653 5.452078 TTGAGATCCGTGCAAATTTTTCT 57.548 34.783 0.00 0.00 0.00 2.52
650 654 5.452078 TGAGATCCGTGCAAATTTTTCTT 57.548 34.783 0.00 0.00 0.00 2.52
651 655 5.841810 TGAGATCCGTGCAAATTTTTCTTT 58.158 33.333 0.00 0.00 0.00 2.52
652 656 6.279882 TGAGATCCGTGCAAATTTTTCTTTT 58.720 32.000 0.00 0.00 0.00 2.27
653 657 6.420604 TGAGATCCGTGCAAATTTTTCTTTTC 59.579 34.615 0.00 0.00 0.00 2.29
654 658 6.279882 AGATCCGTGCAAATTTTTCTTTTCA 58.720 32.000 0.00 0.00 0.00 2.69
655 659 6.930722 AGATCCGTGCAAATTTTTCTTTTCAT 59.069 30.769 0.00 0.00 0.00 2.57
656 660 6.917217 TCCGTGCAAATTTTTCTTTTCATT 57.083 29.167 0.00 0.00 0.00 2.57
657 661 7.313951 TCCGTGCAAATTTTTCTTTTCATTT 57.686 28.000 0.00 0.00 0.00 2.32
658 662 7.756558 TCCGTGCAAATTTTTCTTTTCATTTT 58.243 26.923 0.00 0.00 0.00 1.82
659 663 8.239998 TCCGTGCAAATTTTTCTTTTCATTTTT 58.760 25.926 0.00 0.00 0.00 1.94
685 689 9.897744 TTTTCTTTCTTGCATGTTAAGTCTATG 57.102 29.630 10.35 0.00 0.00 2.23
686 690 8.621532 TTCTTTCTTGCATGTTAAGTCTATGT 57.378 30.769 10.35 0.00 0.00 2.29
687 691 8.256611 TCTTTCTTGCATGTTAAGTCTATGTC 57.743 34.615 10.35 0.00 0.00 3.06
688 692 6.647212 TTCTTGCATGTTAAGTCTATGTCG 57.353 37.500 10.35 0.00 0.00 4.35
689 693 5.961272 TCTTGCATGTTAAGTCTATGTCGA 58.039 37.500 10.35 0.00 0.00 4.20
690 694 6.573434 TCTTGCATGTTAAGTCTATGTCGAT 58.427 36.000 10.35 0.00 0.00 3.59
691 695 6.476706 TCTTGCATGTTAAGTCTATGTCGATG 59.523 38.462 10.35 0.00 0.00 3.84
692 696 5.901552 TGCATGTTAAGTCTATGTCGATGA 58.098 37.500 0.00 0.00 0.00 2.92
693 697 5.979517 TGCATGTTAAGTCTATGTCGATGAG 59.020 40.000 0.00 0.00 0.00 2.90
694 698 6.183360 TGCATGTTAAGTCTATGTCGATGAGA 60.183 38.462 0.00 0.00 0.00 3.27
704 708 7.005709 TCTATGTCGATGAGACCTAGATACA 57.994 40.000 8.49 0.00 45.66 2.29
705 709 6.874664 TCTATGTCGATGAGACCTAGATACAC 59.125 42.308 8.49 0.00 45.66 2.90
706 710 4.752661 GTCGATGAGACCTAGATACACC 57.247 50.000 0.00 0.00 43.95 4.16
707 711 3.502979 GTCGATGAGACCTAGATACACCC 59.497 52.174 0.00 0.00 43.95 4.61
708 712 3.394940 TCGATGAGACCTAGATACACCCT 59.605 47.826 0.00 0.00 0.00 4.34
709 713 3.754323 CGATGAGACCTAGATACACCCTC 59.246 52.174 0.00 0.00 0.00 4.30
710 714 4.730966 GATGAGACCTAGATACACCCTCA 58.269 47.826 0.00 0.00 34.29 3.86
711 715 4.603094 TGAGACCTAGATACACCCTCAA 57.397 45.455 0.00 0.00 0.00 3.02
720 724 8.832735 ACCTAGATACACCCTCAAGAAAAATAA 58.167 33.333 0.00 0.00 0.00 1.40
752 756 6.489675 AGATATGTAAGCGCAATCAACAAAG 58.510 36.000 11.47 0.00 0.00 2.77
773 777 2.892373 TCGGCGCAAACTCAATTAAG 57.108 45.000 10.83 0.00 0.00 1.85
805 1560 7.212976 TCAGAAGAAGAAATAGAATCGGATGG 58.787 38.462 0.00 0.00 0.00 3.51
861 1616 2.069776 CACTTCCAGAAGCCCCAGA 58.930 57.895 7.32 0.00 41.99 3.86
1190 1964 4.227134 CTCCTCCATCACCGCCGG 62.227 72.222 0.00 0.00 0.00 6.13
2043 2868 3.889044 CGCTCGCCCGAGAAGCTA 61.889 66.667 20.69 0.00 44.53 3.32
2064 2889 7.316640 AGCTATCACGGATTCTTGATATGTAC 58.683 38.462 0.86 0.00 34.84 2.90
2226 3051 4.103103 CAGCAGGAGTCGTCGCGA 62.103 66.667 3.71 3.71 0.00 5.87
2364 3189 1.620323 AGCAATGCTTTGGAAAGACCC 59.380 47.619 0.00 0.00 33.89 4.46
2637 3465 5.990668 TCAAAGAGCTACCTAAGGATTTCC 58.009 41.667 0.00 0.00 0.00 3.13
2952 3780 7.545546 AGTATATAAAGTACACCCCAGAGGAT 58.454 38.462 0.00 0.00 39.89 3.24
2997 3825 3.403558 GAGGGCTCACCAGGGTCC 61.404 72.222 0.00 0.00 43.89 4.46
3085 3914 8.402472 TGTTAAAGTGGTCTTACATTTGTTGAG 58.598 33.333 0.00 0.00 33.09 3.02
3270 4099 5.909621 ATTCTGTGTTAGCTGCAATTGAT 57.090 34.783 10.34 0.00 0.00 2.57
3273 4102 4.945543 TCTGTGTTAGCTGCAATTGATCAT 59.054 37.500 10.34 0.00 0.00 2.45
3329 4160 0.531090 TTGTTCGACTGGGTTGACCG 60.531 55.000 0.00 0.00 44.64 4.79
3375 4206 2.114670 CCCGTGCAGGCATAACCAG 61.115 63.158 0.00 0.00 43.14 4.00
3389 4220 6.071391 AGGCATAACCAGTTTAGAATTGTTGG 60.071 38.462 0.00 0.00 43.14 3.77
3390 4221 6.295067 GGCATAACCAGTTTAGAATTGTTGGT 60.295 38.462 0.00 0.00 40.45 3.67
3392 4223 7.116233 GCATAACCAGTTTAGAATTGTTGGTTG 59.884 37.037 15.98 5.86 45.58 3.77
3393 4224 6.783708 AACCAGTTTAGAATTGTTGGTTGA 57.216 33.333 8.25 0.00 44.67 3.18
3394 4225 6.783708 ACCAGTTTAGAATTGTTGGTTGAA 57.216 33.333 0.00 0.00 35.50 2.69
3395 4226 7.176589 ACCAGTTTAGAATTGTTGGTTGAAA 57.823 32.000 0.00 0.00 35.50 2.69
3396 4227 7.791029 ACCAGTTTAGAATTGTTGGTTGAAAT 58.209 30.769 0.00 0.00 35.50 2.17
3439 4271 6.908870 TGAATGAGAATTACTTCATGGTCG 57.091 37.500 0.00 0.00 33.56 4.79
3476 4308 2.427506 GAAGTGGTGGCTTCTTAGTGG 58.572 52.381 0.00 0.00 41.07 4.00
3537 4369 6.350949 GCTTTAGGAATGGCTGGTTCATTTAA 60.351 38.462 0.00 0.00 35.26 1.52
3668 7736 3.429085 CGTTTCATTGTGAGCTATTGCC 58.571 45.455 0.00 0.00 40.80 4.52
3692 12071 1.003355 GTGCCTGTAAGCCTGCAGA 60.003 57.895 17.39 0.00 37.46 4.26
3732 12111 3.356290 CCTGGCTAGGCAAAATAACTGT 58.644 45.455 20.64 0.00 37.25 3.55
3827 12260 9.715121 TTGTCCAACTACTAAAACTGTATAAGG 57.285 33.333 0.00 0.00 0.00 2.69
3828 12261 8.873144 TGTCCAACTACTAAAACTGTATAAGGT 58.127 33.333 0.00 0.00 0.00 3.50
3829 12262 9.716531 GTCCAACTACTAAAACTGTATAAGGTT 57.283 33.333 0.00 0.00 37.44 3.50
3830 12263 9.715121 TCCAACTACTAAAACTGTATAAGGTTG 57.285 33.333 0.00 0.00 35.38 3.77
3831 12264 9.715121 CCAACTACTAAAACTGTATAAGGTTGA 57.285 33.333 0.00 0.00 35.38 3.18
3851 12284 6.839124 TTGAATTATCTCAACATTGCCTGT 57.161 33.333 0.00 0.00 40.84 4.00
3852 12285 6.198650 TGAATTATCTCAACATTGCCTGTG 57.801 37.500 0.00 0.00 38.39 3.66
3853 12286 4.644103 ATTATCTCAACATTGCCTGTGC 57.356 40.909 0.00 0.00 38.39 4.57
3854 12287 1.180029 ATCTCAACATTGCCTGTGCC 58.820 50.000 0.00 0.00 38.39 5.01
3855 12288 0.111061 TCTCAACATTGCCTGTGCCT 59.889 50.000 0.00 0.00 38.39 4.75
3856 12289 0.242825 CTCAACATTGCCTGTGCCTG 59.757 55.000 0.00 0.00 38.39 4.85
3857 12290 0.467844 TCAACATTGCCTGTGCCTGT 60.468 50.000 0.00 0.00 38.39 4.00
3858 12291 0.038892 CAACATTGCCTGTGCCTGTC 60.039 55.000 0.00 0.00 38.39 3.51
3859 12292 0.467844 AACATTGCCTGTGCCTGTCA 60.468 50.000 0.00 0.00 38.39 3.58
3860 12293 0.467844 ACATTGCCTGTGCCTGTCAA 60.468 50.000 0.00 0.00 36.48 3.18
3861 12294 0.892755 CATTGCCTGTGCCTGTCAAT 59.107 50.000 0.00 0.00 36.33 2.57
3862 12295 2.093890 CATTGCCTGTGCCTGTCAATA 58.906 47.619 0.00 0.00 36.33 1.90
3863 12296 2.284754 TTGCCTGTGCCTGTCAATAA 57.715 45.000 0.00 0.00 36.33 1.40
3864 12297 1.825090 TGCCTGTGCCTGTCAATAAG 58.175 50.000 0.00 0.00 36.33 1.73
3865 12298 1.350684 TGCCTGTGCCTGTCAATAAGA 59.649 47.619 0.00 0.00 36.33 2.10
3866 12299 2.025981 TGCCTGTGCCTGTCAATAAGAT 60.026 45.455 0.00 0.00 36.33 2.40
3867 12300 3.019564 GCCTGTGCCTGTCAATAAGATT 58.980 45.455 0.00 0.00 0.00 2.40
3868 12301 3.181493 GCCTGTGCCTGTCAATAAGATTG 60.181 47.826 0.00 0.00 0.00 2.67
3869 12302 4.012374 CCTGTGCCTGTCAATAAGATTGT 58.988 43.478 0.00 0.00 0.00 2.71
3870 12303 4.460382 CCTGTGCCTGTCAATAAGATTGTT 59.540 41.667 0.00 0.00 0.00 2.83
3871 12304 5.375417 TGTGCCTGTCAATAAGATTGTTG 57.625 39.130 0.00 0.00 0.00 3.33
3872 12305 5.069318 TGTGCCTGTCAATAAGATTGTTGA 58.931 37.500 1.15 1.15 36.20 3.18
3873 12306 5.181811 TGTGCCTGTCAATAAGATTGTTGAG 59.818 40.000 5.15 0.00 38.65 3.02
3874 12307 4.701651 TGCCTGTCAATAAGATTGTTGAGG 59.298 41.667 5.15 5.74 38.65 3.86
3875 12308 4.702131 GCCTGTCAATAAGATTGTTGAGGT 59.298 41.667 5.15 0.00 38.65 3.85
3935 12368 2.094545 ACCTGCAAATCTGGAAAATCGC 60.095 45.455 0.00 0.00 37.25 4.58
3984 12417 0.324614 AGGGTGAATGATCGTGTGCA 59.675 50.000 0.00 0.00 0.00 4.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 2.903135 CTCTCTCTCTGGAAAACCTGGT 59.097 50.000 0.00 0.00 0.00 4.00
4 5 3.169099 TCTCTCTCTCTGGAAAACCTGG 58.831 50.000 0.00 0.00 0.00 4.45
5 6 3.831911 ACTCTCTCTCTCTGGAAAACCTG 59.168 47.826 0.00 0.00 0.00 4.00
6 7 3.831911 CACTCTCTCTCTCTGGAAAACCT 59.168 47.826 0.00 0.00 0.00 3.50
8 9 4.764823 TCTCACTCTCTCTCTCTGGAAAAC 59.235 45.833 0.00 0.00 0.00 2.43
9 10 4.991776 TCTCACTCTCTCTCTCTGGAAAA 58.008 43.478 0.00 0.00 0.00 2.29
10 11 4.288366 TCTCTCACTCTCTCTCTCTGGAAA 59.712 45.833 0.00 0.00 0.00 3.13
11 12 3.843619 TCTCTCACTCTCTCTCTCTGGAA 59.156 47.826 0.00 0.00 0.00 3.53
12 13 3.449918 TCTCTCACTCTCTCTCTCTGGA 58.550 50.000 0.00 0.00 0.00 3.86
13 14 3.912496 TCTCTCACTCTCTCTCTCTGG 57.088 52.381 0.00 0.00 0.00 3.86
14 15 5.003160 TGTTTCTCTCACTCTCTCTCTCTG 58.997 45.833 0.00 0.00 0.00 3.35
15 16 5.013079 TCTGTTTCTCTCACTCTCTCTCTCT 59.987 44.000 0.00 0.00 0.00 3.10
16 17 5.122396 GTCTGTTTCTCTCACTCTCTCTCTC 59.878 48.000 0.00 0.00 0.00 3.20
17 18 5.003804 GTCTGTTTCTCTCACTCTCTCTCT 58.996 45.833 0.00 0.00 0.00 3.10
18 19 5.003804 AGTCTGTTTCTCTCACTCTCTCTC 58.996 45.833 0.00 0.00 0.00 3.20
19 20 4.985538 AGTCTGTTTCTCTCACTCTCTCT 58.014 43.478 0.00 0.00 0.00 3.10
20 21 4.759693 TGAGTCTGTTTCTCTCACTCTCTC 59.240 45.833 0.00 0.00 35.50 3.20
21 22 4.724399 TGAGTCTGTTTCTCTCACTCTCT 58.276 43.478 0.00 0.00 35.50 3.10
22 23 5.446143 TTGAGTCTGTTTCTCTCACTCTC 57.554 43.478 0.00 0.00 37.84 3.20
23 24 5.047377 GGATTGAGTCTGTTTCTCTCACTCT 60.047 44.000 0.00 0.00 37.73 3.24
24 25 5.167845 GGATTGAGTCTGTTTCTCTCACTC 58.832 45.833 0.00 0.00 37.84 3.51
25 26 4.590647 TGGATTGAGTCTGTTTCTCTCACT 59.409 41.667 0.00 0.00 37.84 3.41
26 27 4.887748 TGGATTGAGTCTGTTTCTCTCAC 58.112 43.478 0.00 0.00 37.84 3.51
27 28 5.163311 TGTTGGATTGAGTCTGTTTCTCTCA 60.163 40.000 0.00 0.00 36.59 3.27
28 29 5.300752 TGTTGGATTGAGTCTGTTTCTCTC 58.699 41.667 0.00 0.00 33.59 3.20
29 30 5.296151 TGTTGGATTGAGTCTGTTTCTCT 57.704 39.130 0.00 0.00 33.59 3.10
30 31 7.672983 TTATGTTGGATTGAGTCTGTTTCTC 57.327 36.000 0.00 0.00 0.00 2.87
44 45 9.255029 AGTAGGCAGTTTTATTTTATGTTGGAT 57.745 29.630 0.00 0.00 0.00 3.41
49 50 6.435904 TGGCAGTAGGCAGTTTTATTTTATGT 59.564 34.615 0.00 0.00 46.46 2.29
113 115 5.160641 ACACATTTGTCACGCATTTTATCC 58.839 37.500 0.00 0.00 0.00 2.59
123 125 4.233789 CCCCATTTTACACATTTGTCACG 58.766 43.478 0.00 0.00 37.15 4.35
126 128 4.882842 ACCCCCATTTTACACATTTGTC 57.117 40.909 0.00 0.00 37.15 3.18
127 129 8.437274 TTTATACCCCCATTTTACACATTTGT 57.563 30.769 0.00 0.00 40.02 2.83
132 134 6.384305 CCCAATTTATACCCCCATTTTACACA 59.616 38.462 0.00 0.00 0.00 3.72
141 143 2.879769 AGTCCCCAATTTATACCCCCA 58.120 47.619 0.00 0.00 0.00 4.96
142 144 3.985553 AAGTCCCCAATTTATACCCCC 57.014 47.619 0.00 0.00 0.00 5.40
143 145 5.138276 GAGAAAGTCCCCAATTTATACCCC 58.862 45.833 0.00 0.00 0.00 4.95
144 146 5.762279 TGAGAAAGTCCCCAATTTATACCC 58.238 41.667 0.00 0.00 0.00 3.69
145 147 7.712204 TTTGAGAAAGTCCCCAATTTATACC 57.288 36.000 0.00 0.00 0.00 2.73
148 150 8.102676 CCATTTTTGAGAAAGTCCCCAATTTAT 58.897 33.333 0.00 0.00 0.00 1.40
149 151 7.449247 CCATTTTTGAGAAAGTCCCCAATTTA 58.551 34.615 0.00 0.00 0.00 1.40
150 152 6.298361 CCATTTTTGAGAAAGTCCCCAATTT 58.702 36.000 0.00 0.00 0.00 1.82
151 153 5.221904 CCCATTTTTGAGAAAGTCCCCAATT 60.222 40.000 0.00 0.00 0.00 2.32
152 154 4.286808 CCCATTTTTGAGAAAGTCCCCAAT 59.713 41.667 0.00 0.00 0.00 3.16
153 155 3.645687 CCCATTTTTGAGAAAGTCCCCAA 59.354 43.478 0.00 0.00 0.00 4.12
183 185 4.713321 CCCCCAAGATTCATCAATTTGACT 59.287 41.667 0.15 0.00 0.00 3.41
185 187 4.686891 ACCCCCAAGATTCATCAATTTGA 58.313 39.130 0.75 0.75 0.00 2.69
189 191 7.365831 CCATTTTTACCCCCAAGATTCATCAAT 60.366 37.037 0.00 0.00 0.00 2.57
224 226 9.234827 TGAGATGCTCTTCAAATATCTTCAAAA 57.765 29.630 0.00 0.00 0.00 2.44
238 242 9.979578 ATAATTATCGGATATGAGATGCTCTTC 57.020 33.333 0.00 0.00 0.00 2.87
239 243 9.979578 GATAATTATCGGATATGAGATGCTCTT 57.020 33.333 9.65 0.00 0.00 2.85
242 246 9.761504 CTTGATAATTATCGGATATGAGATGCT 57.238 33.333 18.35 0.00 35.48 3.79
252 256 7.221450 TCCCGTTTTCTTGATAATTATCGGAT 58.779 34.615 18.35 0.00 36.97 4.18
256 260 8.352942 AGCAATCCCGTTTTCTTGATAATTATC 58.647 33.333 17.09 17.09 0.00 1.75
260 264 6.238759 GCTAGCAATCCCGTTTTCTTGATAAT 60.239 38.462 10.63 0.00 0.00 1.28
268 272 2.609916 GAGAGCTAGCAATCCCGTTTTC 59.390 50.000 18.83 1.06 0.00 2.29
269 273 2.027192 TGAGAGCTAGCAATCCCGTTTT 60.027 45.455 18.83 0.00 0.00 2.43
270 274 1.555075 TGAGAGCTAGCAATCCCGTTT 59.445 47.619 18.83 0.00 0.00 3.60
271 275 1.195115 TGAGAGCTAGCAATCCCGTT 58.805 50.000 18.83 0.00 0.00 4.44
272 276 1.195115 TTGAGAGCTAGCAATCCCGT 58.805 50.000 18.83 0.00 0.00 5.28
273 277 2.411904 GATTGAGAGCTAGCAATCCCG 58.588 52.381 18.83 0.00 42.71 5.14
274 278 2.036475 TCGATTGAGAGCTAGCAATCCC 59.964 50.000 24.27 0.00 44.59 3.85
275 279 3.056304 GTCGATTGAGAGCTAGCAATCC 58.944 50.000 24.27 14.06 44.59 3.01
276 280 3.056304 GGTCGATTGAGAGCTAGCAATC 58.944 50.000 18.83 22.11 44.20 2.67
277 281 2.544694 CGGTCGATTGAGAGCTAGCAAT 60.545 50.000 18.83 11.99 37.43 3.56
278 282 1.202302 CGGTCGATTGAGAGCTAGCAA 60.202 52.381 18.83 2.12 36.57 3.91
279 283 0.382158 CGGTCGATTGAGAGCTAGCA 59.618 55.000 18.83 0.00 36.57 3.49
280 284 0.663688 TCGGTCGATTGAGAGCTAGC 59.336 55.000 6.62 6.62 36.57 3.42
281 285 2.032377 GTCTCGGTCGATTGAGAGCTAG 60.032 54.545 16.93 0.00 41.63 3.42
282 286 1.941294 GTCTCGGTCGATTGAGAGCTA 59.059 52.381 16.93 0.00 41.63 3.32
283 287 0.736053 GTCTCGGTCGATTGAGAGCT 59.264 55.000 16.93 0.00 41.63 4.09
284 288 0.736053 AGTCTCGGTCGATTGAGAGC 59.264 55.000 16.93 12.61 41.63 4.09
285 289 3.242804 GGTTAGTCTCGGTCGATTGAGAG 60.243 52.174 16.93 10.34 41.63 3.20
286 290 2.681848 GGTTAGTCTCGGTCGATTGAGA 59.318 50.000 13.63 13.63 38.85 3.27
287 291 2.422479 TGGTTAGTCTCGGTCGATTGAG 59.578 50.000 9.83 9.83 0.00 3.02
288 292 2.439409 TGGTTAGTCTCGGTCGATTGA 58.561 47.619 0.00 0.00 0.00 2.57
289 293 2.933495 TGGTTAGTCTCGGTCGATTG 57.067 50.000 0.00 0.00 0.00 2.67
290 294 2.824341 ACTTGGTTAGTCTCGGTCGATT 59.176 45.455 0.00 0.00 28.23 3.34
291 295 2.444421 ACTTGGTTAGTCTCGGTCGAT 58.556 47.619 0.00 0.00 28.23 3.59
292 296 1.901591 ACTTGGTTAGTCTCGGTCGA 58.098 50.000 0.00 0.00 28.23 4.20
301 305 4.079970 TCATCGACTGAGACTTGGTTAGT 58.920 43.478 0.00 0.00 40.71 2.24
302 306 4.703645 TCATCGACTGAGACTTGGTTAG 57.296 45.455 0.00 0.00 0.00 2.34
303 307 6.961360 ATATCATCGACTGAGACTTGGTTA 57.039 37.500 0.00 0.00 37.28 2.85
304 308 5.860941 ATATCATCGACTGAGACTTGGTT 57.139 39.130 0.00 0.00 37.28 3.67
305 309 7.531857 AATATATCATCGACTGAGACTTGGT 57.468 36.000 0.00 0.00 37.28 3.67
330 334 9.232473 GAAACAAACAACCTCTAAGATCCTATT 57.768 33.333 0.00 0.00 0.00 1.73
331 335 7.829706 GGAAACAAACAACCTCTAAGATCCTAT 59.170 37.037 0.00 0.00 0.00 2.57
332 336 7.166167 GGAAACAAACAACCTCTAAGATCCTA 58.834 38.462 0.00 0.00 0.00 2.94
333 337 6.004574 GGAAACAAACAACCTCTAAGATCCT 58.995 40.000 0.00 0.00 0.00 3.24
334 338 5.768164 TGGAAACAAACAACCTCTAAGATCC 59.232 40.000 0.00 0.00 37.44 3.36
335 339 6.072452 CCTGGAAACAAACAACCTCTAAGATC 60.072 42.308 0.00 0.00 42.06 2.75
336 340 5.770162 CCTGGAAACAAACAACCTCTAAGAT 59.230 40.000 0.00 0.00 42.06 2.40
337 341 5.104277 TCCTGGAAACAAACAACCTCTAAGA 60.104 40.000 0.00 0.00 42.06 2.10
338 342 5.130350 TCCTGGAAACAAACAACCTCTAAG 58.870 41.667 0.00 0.00 42.06 2.18
339 343 5.118729 TCCTGGAAACAAACAACCTCTAA 57.881 39.130 0.00 0.00 42.06 2.10
340 344 4.781775 TCCTGGAAACAAACAACCTCTA 57.218 40.909 0.00 0.00 42.06 2.43
341 345 3.662759 TCCTGGAAACAAACAACCTCT 57.337 42.857 0.00 0.00 42.06 3.69
342 346 3.699538 AGTTCCTGGAAACAAACAACCTC 59.300 43.478 11.40 0.00 42.06 3.85
343 347 3.708451 AGTTCCTGGAAACAAACAACCT 58.292 40.909 11.40 0.00 42.06 3.50
344 348 4.465632 AAGTTCCTGGAAACAAACAACC 57.534 40.909 11.40 0.00 42.06 3.77
345 349 6.478673 CCAATAAGTTCCTGGAAACAAACAAC 59.521 38.462 11.40 0.00 42.06 3.32
346 350 6.155393 ACCAATAAGTTCCTGGAAACAAACAA 59.845 34.615 11.40 0.00 42.06 2.83
347 351 5.659079 ACCAATAAGTTCCTGGAAACAAACA 59.341 36.000 11.40 0.00 42.06 2.83
348 352 6.156748 ACCAATAAGTTCCTGGAAACAAAC 57.843 37.500 11.40 0.00 42.06 2.93
349 353 6.800072 AACCAATAAGTTCCTGGAAACAAA 57.200 33.333 11.40 0.00 42.06 2.83
350 354 6.800072 AAACCAATAAGTTCCTGGAAACAA 57.200 33.333 11.40 0.00 42.06 2.83
351 355 6.492087 CCTAAACCAATAAGTTCCTGGAAACA 59.508 38.462 11.40 0.00 39.59 2.83
352 356 6.071560 CCCTAAACCAATAAGTTCCTGGAAAC 60.072 42.308 11.40 5.85 34.16 2.78
353 357 6.014012 CCCTAAACCAATAAGTTCCTGGAAA 58.986 40.000 11.40 0.00 34.16 3.13
354 358 5.313772 TCCCTAAACCAATAAGTTCCTGGAA 59.686 40.000 4.68 4.68 34.16 3.53
355 359 4.853276 TCCCTAAACCAATAAGTTCCTGGA 59.147 41.667 9.58 0.00 34.16 3.86
356 360 4.948004 GTCCCTAAACCAATAAGTTCCTGG 59.052 45.833 2.31 2.31 36.24 4.45
357 361 5.816682 AGTCCCTAAACCAATAAGTTCCTG 58.183 41.667 0.00 0.00 0.00 3.86
358 362 6.464530 AAGTCCCTAAACCAATAAGTTCCT 57.535 37.500 0.00 0.00 0.00 3.36
359 363 8.640063 TTTAAGTCCCTAAACCAATAAGTTCC 57.360 34.615 0.00 0.00 0.00 3.62
383 387 6.910259 AGATGGGACTTATAGGGACTTTTT 57.090 37.500 0.00 0.00 41.75 1.94
384 388 8.272889 GTTTAGATGGGACTTATAGGGACTTTT 58.727 37.037 0.00 0.00 41.75 2.27
385 389 7.147355 GGTTTAGATGGGACTTATAGGGACTTT 60.147 40.741 0.00 0.00 41.75 2.66
386 390 6.329460 GGTTTAGATGGGACTTATAGGGACTT 59.671 42.308 0.00 0.00 41.75 3.01
387 391 5.845065 GGTTTAGATGGGACTTATAGGGACT 59.155 44.000 0.00 0.00 46.37 3.85
388 392 5.605488 TGGTTTAGATGGGACTTATAGGGAC 59.395 44.000 0.00 0.00 0.00 4.46
389 393 5.795079 TGGTTTAGATGGGACTTATAGGGA 58.205 41.667 0.00 0.00 0.00 4.20
390 394 6.509523 TTGGTTTAGATGGGACTTATAGGG 57.490 41.667 0.00 0.00 0.00 3.53
391 395 9.726438 CTATTTGGTTTAGATGGGACTTATAGG 57.274 37.037 0.00 0.00 0.00 2.57
392 396 9.726438 CCTATTTGGTTTAGATGGGACTTATAG 57.274 37.037 0.00 0.00 0.00 1.31
393 397 9.455144 TCCTATTTGGTTTAGATGGGACTTATA 57.545 33.333 0.00 0.00 37.07 0.98
394 398 8.344939 TCCTATTTGGTTTAGATGGGACTTAT 57.655 34.615 0.00 0.00 37.07 1.73
395 399 7.147373 CCTCCTATTTGGTTTAGATGGGACTTA 60.147 40.741 0.00 0.00 37.07 2.24
396 400 6.353951 CCTCCTATTTGGTTTAGATGGGACTT 60.354 42.308 0.00 0.00 37.07 3.01
397 401 5.132816 CCTCCTATTTGGTTTAGATGGGACT 59.867 44.000 0.00 0.00 37.07 3.85
398 402 5.377478 CCTCCTATTTGGTTTAGATGGGAC 58.623 45.833 0.00 0.00 37.07 4.46
399 403 4.415512 CCCTCCTATTTGGTTTAGATGGGA 59.584 45.833 0.00 0.00 34.10 4.37
400 404 4.415512 TCCCTCCTATTTGGTTTAGATGGG 59.584 45.833 0.00 0.00 37.07 4.00
401 405 5.132816 AGTCCCTCCTATTTGGTTTAGATGG 59.867 44.000 0.00 0.00 37.07 3.51
402 406 6.253946 AGTCCCTCCTATTTGGTTTAGATG 57.746 41.667 0.00 0.00 37.07 2.90
403 407 6.910259 AAGTCCCTCCTATTTGGTTTAGAT 57.090 37.500 0.00 0.00 37.07 1.98
404 408 9.155785 CTATAAGTCCCTCCTATTTGGTTTAGA 57.844 37.037 0.00 0.00 37.07 2.10
405 409 8.376270 CCTATAAGTCCCTCCTATTTGGTTTAG 58.624 40.741 0.00 0.00 37.07 1.85
406 410 7.294008 CCCTATAAGTCCCTCCTATTTGGTTTA 59.706 40.741 0.00 0.00 37.07 2.01
407 411 6.102762 CCCTATAAGTCCCTCCTATTTGGTTT 59.897 42.308 0.00 0.00 37.07 3.27
408 412 5.611408 CCCTATAAGTCCCTCCTATTTGGTT 59.389 44.000 0.00 0.00 37.07 3.67
409 413 5.102346 TCCCTATAAGTCCCTCCTATTTGGT 60.102 44.000 0.00 0.00 37.07 3.67
410 414 5.248705 GTCCCTATAAGTCCCTCCTATTTGG 59.751 48.000 0.00 0.00 37.10 3.28
411 415 6.085416 AGTCCCTATAAGTCCCTCCTATTTG 58.915 44.000 0.00 0.00 0.00 2.32
412 416 6.310459 AGTCCCTATAAGTCCCTCCTATTT 57.690 41.667 0.00 0.00 0.00 1.40
413 417 5.970692 AGTCCCTATAAGTCCCTCCTATT 57.029 43.478 0.00 0.00 0.00 1.73
414 418 5.970692 AAGTCCCTATAAGTCCCTCCTAT 57.029 43.478 0.00 0.00 0.00 2.57
415 419 6.870815 TTAAGTCCCTATAAGTCCCTCCTA 57.129 41.667 0.00 0.00 0.00 2.94
416 420 5.763239 TTAAGTCCCTATAAGTCCCTCCT 57.237 43.478 0.00 0.00 0.00 3.69
417 421 5.904169 ACTTTAAGTCCCTATAAGTCCCTCC 59.096 44.000 0.00 0.00 0.00 4.30
418 422 6.610425 TCACTTTAAGTCCCTATAAGTCCCTC 59.390 42.308 0.00 0.00 0.00 4.30
419 423 6.509386 TCACTTTAAGTCCCTATAAGTCCCT 58.491 40.000 0.00 0.00 0.00 4.20
420 424 6.685873 GCTCACTTTAAGTCCCTATAAGTCCC 60.686 46.154 0.00 0.00 0.00 4.46
421 425 6.127140 TGCTCACTTTAAGTCCCTATAAGTCC 60.127 42.308 0.00 0.00 0.00 3.85
422 426 6.875076 TGCTCACTTTAAGTCCCTATAAGTC 58.125 40.000 0.00 0.00 0.00 3.01
423 427 6.869206 TGCTCACTTTAAGTCCCTATAAGT 57.131 37.500 0.00 0.00 0.00 2.24
424 428 8.616076 CAAATGCTCACTTTAAGTCCCTATAAG 58.384 37.037 0.00 0.00 0.00 1.73
425 429 7.556275 CCAAATGCTCACTTTAAGTCCCTATAA 59.444 37.037 0.00 0.00 0.00 0.98
426 430 7.054124 CCAAATGCTCACTTTAAGTCCCTATA 58.946 38.462 0.00 0.00 0.00 1.31
427 431 5.888161 CCAAATGCTCACTTTAAGTCCCTAT 59.112 40.000 0.00 0.00 0.00 2.57
428 432 5.253330 CCAAATGCTCACTTTAAGTCCCTA 58.747 41.667 0.00 0.00 0.00 3.53
429 433 4.082125 CCAAATGCTCACTTTAAGTCCCT 58.918 43.478 0.00 0.00 0.00 4.20
430 434 3.193479 CCCAAATGCTCACTTTAAGTCCC 59.807 47.826 0.00 0.00 0.00 4.46
431 435 4.079253 TCCCAAATGCTCACTTTAAGTCC 58.921 43.478 0.00 0.00 0.00 3.85
432 436 4.762251 AGTCCCAAATGCTCACTTTAAGTC 59.238 41.667 0.00 0.00 0.00 3.01
433 437 4.729868 AGTCCCAAATGCTCACTTTAAGT 58.270 39.130 0.00 0.00 0.00 2.24
434 438 5.712152 AAGTCCCAAATGCTCACTTTAAG 57.288 39.130 0.00 0.00 0.00 1.85
435 439 6.945435 TCATAAGTCCCAAATGCTCACTTTAA 59.055 34.615 0.00 0.00 0.00 1.52
436 440 6.480763 TCATAAGTCCCAAATGCTCACTTTA 58.519 36.000 0.00 0.00 0.00 1.85
437 441 5.324409 TCATAAGTCCCAAATGCTCACTTT 58.676 37.500 0.00 0.00 0.00 2.66
438 442 4.922206 TCATAAGTCCCAAATGCTCACTT 58.078 39.130 0.00 0.00 0.00 3.16
439 443 4.574674 TCATAAGTCCCAAATGCTCACT 57.425 40.909 0.00 0.00 0.00 3.41
440 444 5.643379 TTTCATAAGTCCCAAATGCTCAC 57.357 39.130 0.00 0.00 0.00 3.51
441 445 7.833682 TCTTATTTCATAAGTCCCAAATGCTCA 59.166 33.333 3.93 0.00 42.21 4.26
442 446 8.131731 GTCTTATTTCATAAGTCCCAAATGCTC 58.868 37.037 3.93 0.00 42.21 4.26
443 447 7.836183 AGTCTTATTTCATAAGTCCCAAATGCT 59.164 33.333 3.93 0.00 42.21 3.79
444 448 8.000780 AGTCTTATTTCATAAGTCCCAAATGC 57.999 34.615 3.93 0.00 42.21 3.56
445 449 9.401058 AGAGTCTTATTTCATAAGTCCCAAATG 57.599 33.333 3.93 0.00 42.21 2.32
446 450 9.620259 GAGAGTCTTATTTCATAAGTCCCAAAT 57.380 33.333 0.00 0.00 42.21 2.32
447 451 8.602424 TGAGAGTCTTATTTCATAAGTCCCAAA 58.398 33.333 0.00 0.00 42.21 3.28
448 452 8.146053 TGAGAGTCTTATTTCATAAGTCCCAA 57.854 34.615 0.00 0.00 42.21 4.12
449 453 7.733773 TGAGAGTCTTATTTCATAAGTCCCA 57.266 36.000 0.00 0.00 42.21 4.37
450 454 7.713073 CCTTGAGAGTCTTATTTCATAAGTCCC 59.287 40.741 0.00 0.00 42.21 4.46
451 455 8.478877 TCCTTGAGAGTCTTATTTCATAAGTCC 58.521 37.037 0.00 0.00 42.21 3.85
452 456 9.528018 CTCCTTGAGAGTCTTATTTCATAAGTC 57.472 37.037 0.00 0.00 37.60 3.01
453 457 9.261035 TCTCCTTGAGAGTCTTATTTCATAAGT 57.739 33.333 0.00 0.00 43.71 2.24
469 473 5.433712 AGTCCCTATAAGACTCTCCTTGAGA 59.566 44.000 0.00 0.00 45.39 3.27
470 474 5.701224 AGTCCCTATAAGACTCTCCTTGAG 58.299 45.833 0.24 0.00 40.61 3.02
471 475 5.735733 AGTCCCTATAAGACTCTCCTTGA 57.264 43.478 0.24 0.00 40.61 3.02
472 476 9.238368 CTATAAGTCCCTATAAGACTCTCCTTG 57.762 40.741 5.74 0.00 43.77 3.61
473 477 8.962205 ACTATAAGTCCCTATAAGACTCTCCTT 58.038 37.037 5.74 0.00 43.77 3.36
474 478 8.528543 ACTATAAGTCCCTATAAGACTCTCCT 57.471 38.462 5.74 0.00 43.77 3.69
475 479 9.016438 CAACTATAAGTCCCTATAAGACTCTCC 57.984 40.741 5.74 0.00 43.77 3.71
476 480 9.577222 ACAACTATAAGTCCCTATAAGACTCTC 57.423 37.037 5.74 0.00 43.77 3.20
520 524 7.074653 TGTTTGGTTCCTGAGACTTATAAGT 57.925 36.000 18.05 18.05 43.16 2.24
521 525 6.595716 CCTGTTTGGTTCCTGAGACTTATAAG 59.404 42.308 11.05 11.05 0.00 1.73
522 526 6.472887 CCTGTTTGGTTCCTGAGACTTATAA 58.527 40.000 0.00 0.00 0.00 0.98
523 527 6.049955 CCTGTTTGGTTCCTGAGACTTATA 57.950 41.667 0.00 0.00 0.00 0.98
524 528 4.911390 CCTGTTTGGTTCCTGAGACTTAT 58.089 43.478 0.00 0.00 0.00 1.73
525 529 4.351874 CCTGTTTGGTTCCTGAGACTTA 57.648 45.455 0.00 0.00 0.00 2.24
526 530 3.214696 CCTGTTTGGTTCCTGAGACTT 57.785 47.619 0.00 0.00 0.00 3.01
527 531 2.938956 CCTGTTTGGTTCCTGAGACT 57.061 50.000 0.00 0.00 0.00 3.24
538 542 4.765339 CCTAAAAAGTCCCTACCTGTTTGG 59.235 45.833 0.00 0.00 42.93 3.28
539 543 4.765339 CCCTAAAAAGTCCCTACCTGTTTG 59.235 45.833 0.00 0.00 0.00 2.93
540 544 4.666431 TCCCTAAAAAGTCCCTACCTGTTT 59.334 41.667 0.00 0.00 0.00 2.83
541 545 4.042560 GTCCCTAAAAAGTCCCTACCTGTT 59.957 45.833 0.00 0.00 0.00 3.16
542 546 3.586174 GTCCCTAAAAAGTCCCTACCTGT 59.414 47.826 0.00 0.00 0.00 4.00
543 547 3.844804 AGTCCCTAAAAAGTCCCTACCTG 59.155 47.826 0.00 0.00 0.00 4.00
544 548 4.157668 AGTCCCTAAAAAGTCCCTACCT 57.842 45.455 0.00 0.00 0.00 3.08
545 549 4.287845 TCAAGTCCCTAAAAAGTCCCTACC 59.712 45.833 0.00 0.00 0.00 3.18
546 550 5.247792 TCTCAAGTCCCTAAAAAGTCCCTAC 59.752 44.000 0.00 0.00 0.00 3.18
547 551 5.247792 GTCTCAAGTCCCTAAAAAGTCCCTA 59.752 44.000 0.00 0.00 0.00 3.53
548 552 4.041815 GTCTCAAGTCCCTAAAAAGTCCCT 59.958 45.833 0.00 0.00 0.00 4.20
549 553 4.041815 AGTCTCAAGTCCCTAAAAAGTCCC 59.958 45.833 0.00 0.00 0.00 4.46
550 554 5.230323 AGTCTCAAGTCCCTAAAAAGTCC 57.770 43.478 0.00 0.00 0.00 3.85
551 555 9.939802 TTATAAGTCTCAAGTCCCTAAAAAGTC 57.060 33.333 0.00 0.00 0.00 3.01
552 556 9.945904 CTTATAAGTCTCAAGTCCCTAAAAAGT 57.054 33.333 4.18 0.00 0.00 2.66
553 557 9.945904 ACTTATAAGTCTCAAGTCCCTAAAAAG 57.054 33.333 12.50 0.00 32.86 2.27
555 559 9.720769 CAACTTATAAGTCTCAAGTCCCTAAAA 57.279 33.333 18.28 0.00 38.57 1.52
556 560 8.319146 CCAACTTATAAGTCTCAAGTCCCTAAA 58.681 37.037 18.28 0.00 38.57 1.85
557 561 7.093024 CCCAACTTATAAGTCTCAAGTCCCTAA 60.093 40.741 18.28 0.00 38.57 2.69
558 562 6.383147 CCCAACTTATAAGTCTCAAGTCCCTA 59.617 42.308 18.28 0.00 38.57 3.53
559 563 5.189934 CCCAACTTATAAGTCTCAAGTCCCT 59.810 44.000 18.28 0.00 38.57 4.20
560 564 5.189145 TCCCAACTTATAAGTCTCAAGTCCC 59.811 44.000 18.28 0.00 38.57 4.46
561 565 6.070710 AGTCCCAACTTATAAGTCTCAAGTCC 60.071 42.308 18.28 3.21 38.57 3.85
562 566 6.937392 AGTCCCAACTTATAAGTCTCAAGTC 58.063 40.000 18.28 6.78 38.57 3.01
563 567 6.936968 AGTCCCAACTTATAAGTCTCAAGT 57.063 37.500 18.28 5.74 38.57 3.16
564 568 9.720769 TTTTAGTCCCAACTTATAAGTCTCAAG 57.279 33.333 18.28 6.66 38.57 3.02
593 597 6.371825 CCTGTTTGGTTCATAAGTCTTAGGAC 59.628 42.308 6.47 0.00 42.41 3.85
594 598 6.472887 CCTGTTTGGTTCATAAGTCTTAGGA 58.527 40.000 2.85 2.85 0.00 2.94
595 599 5.648092 CCCTGTTTGGTTCATAAGTCTTAGG 59.352 44.000 0.00 0.00 0.00 2.69
596 600 5.123979 GCCCTGTTTGGTTCATAAGTCTTAG 59.876 44.000 0.00 0.00 0.00 2.18
597 601 5.007682 GCCCTGTTTGGTTCATAAGTCTTA 58.992 41.667 0.00 0.00 0.00 2.10
598 602 3.826729 GCCCTGTTTGGTTCATAAGTCTT 59.173 43.478 0.00 0.00 0.00 3.01
599 603 3.421844 GCCCTGTTTGGTTCATAAGTCT 58.578 45.455 0.00 0.00 0.00 3.24
600 604 2.492088 GGCCCTGTTTGGTTCATAAGTC 59.508 50.000 0.00 0.00 0.00 3.01
601 605 2.110011 AGGCCCTGTTTGGTTCATAAGT 59.890 45.455 0.00 0.00 0.00 2.24
602 606 2.807676 AGGCCCTGTTTGGTTCATAAG 58.192 47.619 0.00 0.00 0.00 1.73
603 607 2.990740 AGGCCCTGTTTGGTTCATAA 57.009 45.000 0.00 0.00 0.00 1.90
604 608 2.990740 AAGGCCCTGTTTGGTTCATA 57.009 45.000 0.00 0.00 0.00 2.15
605 609 2.158385 TGTAAGGCCCTGTTTGGTTCAT 60.158 45.455 0.00 0.00 0.00 2.57
606 610 1.215673 TGTAAGGCCCTGTTTGGTTCA 59.784 47.619 0.00 0.00 0.00 3.18
607 611 1.989706 TGTAAGGCCCTGTTTGGTTC 58.010 50.000 0.00 0.00 0.00 3.62
608 612 2.632512 CAATGTAAGGCCCTGTTTGGTT 59.367 45.455 0.00 0.00 0.00 3.67
609 613 2.158385 TCAATGTAAGGCCCTGTTTGGT 60.158 45.455 0.00 0.00 0.00 3.67
610 614 2.493278 CTCAATGTAAGGCCCTGTTTGG 59.507 50.000 0.00 0.00 0.00 3.28
611 615 3.420893 TCTCAATGTAAGGCCCTGTTTG 58.579 45.455 0.00 0.00 0.00 2.93
612 616 3.806949 TCTCAATGTAAGGCCCTGTTT 57.193 42.857 0.00 0.00 0.00 2.83
613 617 3.372025 GGATCTCAATGTAAGGCCCTGTT 60.372 47.826 0.00 0.00 0.00 3.16
614 618 2.173569 GGATCTCAATGTAAGGCCCTGT 59.826 50.000 0.00 0.00 0.00 4.00
615 619 2.808202 CGGATCTCAATGTAAGGCCCTG 60.808 54.545 0.00 0.00 0.00 4.45
616 620 1.417890 CGGATCTCAATGTAAGGCCCT 59.582 52.381 0.00 0.00 0.00 5.19
617 621 1.141053 ACGGATCTCAATGTAAGGCCC 59.859 52.381 0.00 0.00 0.00 5.80
618 622 2.213499 CACGGATCTCAATGTAAGGCC 58.787 52.381 0.00 0.00 0.00 5.19
619 623 1.599542 GCACGGATCTCAATGTAAGGC 59.400 52.381 0.00 0.00 0.00 4.35
620 624 2.905075 TGCACGGATCTCAATGTAAGG 58.095 47.619 0.00 0.00 0.00 2.69
621 625 4.944962 TTTGCACGGATCTCAATGTAAG 57.055 40.909 0.00 0.00 0.00 2.34
622 626 5.895636 AATTTGCACGGATCTCAATGTAA 57.104 34.783 0.00 0.00 0.00 2.41
623 627 5.895636 AAATTTGCACGGATCTCAATGTA 57.104 34.783 0.00 0.00 0.00 2.29
624 628 4.789012 AAATTTGCACGGATCTCAATGT 57.211 36.364 0.00 0.00 0.00 2.71
625 629 5.865552 AGAAAAATTTGCACGGATCTCAATG 59.134 36.000 0.00 0.00 0.00 2.82
626 630 6.029346 AGAAAAATTTGCACGGATCTCAAT 57.971 33.333 0.00 0.00 0.00 2.57
627 631 5.452078 AGAAAAATTTGCACGGATCTCAA 57.548 34.783 0.00 0.00 0.00 3.02
628 632 5.452078 AAGAAAAATTTGCACGGATCTCA 57.548 34.783 0.00 0.00 0.00 3.27
629 633 6.420604 TGAAAAGAAAAATTTGCACGGATCTC 59.579 34.615 0.00 0.00 0.00 2.75
630 634 6.279882 TGAAAAGAAAAATTTGCACGGATCT 58.720 32.000 0.00 0.00 0.00 2.75
631 635 6.523676 TGAAAAGAAAAATTTGCACGGATC 57.476 33.333 0.00 0.00 0.00 3.36
632 636 7.495135 AATGAAAAGAAAAATTTGCACGGAT 57.505 28.000 0.00 0.00 30.45 4.18
633 637 6.917217 AATGAAAAGAAAAATTTGCACGGA 57.083 29.167 0.00 0.00 30.45 4.69
634 638 7.967771 AAAATGAAAAGAAAAATTTGCACGG 57.032 28.000 0.00 0.00 30.45 4.94
659 663 9.897744 CATAGACTTAACATGCAAGAAAGAAAA 57.102 29.630 13.15 2.22 0.00 2.29
660 664 9.066892 ACATAGACTTAACATGCAAGAAAGAAA 57.933 29.630 13.15 2.47 0.00 2.52
661 665 8.621532 ACATAGACTTAACATGCAAGAAAGAA 57.378 30.769 13.15 2.72 0.00 2.52
662 666 7.063426 CGACATAGACTTAACATGCAAGAAAGA 59.937 37.037 13.15 0.00 0.00 2.52
663 667 7.063426 TCGACATAGACTTAACATGCAAGAAAG 59.937 37.037 13.15 1.75 0.00 2.62
664 668 6.871492 TCGACATAGACTTAACATGCAAGAAA 59.129 34.615 13.15 0.00 0.00 2.52
665 669 6.394809 TCGACATAGACTTAACATGCAAGAA 58.605 36.000 13.15 1.34 0.00 2.52
666 670 5.961272 TCGACATAGACTTAACATGCAAGA 58.039 37.500 13.15 0.00 0.00 3.02
667 671 6.476706 TCATCGACATAGACTTAACATGCAAG 59.523 38.462 0.00 6.19 0.00 4.01
668 672 6.337356 TCATCGACATAGACTTAACATGCAA 58.663 36.000 0.00 0.00 0.00 4.08
669 673 5.901552 TCATCGACATAGACTTAACATGCA 58.098 37.500 0.00 0.00 0.00 3.96
670 674 6.143118 GTCTCATCGACATAGACTTAACATGC 59.857 42.308 13.60 0.00 42.37 4.06
671 675 6.638873 GGTCTCATCGACATAGACTTAACATG 59.361 42.308 18.01 0.00 44.68 3.21
672 676 6.547880 AGGTCTCATCGACATAGACTTAACAT 59.452 38.462 18.01 2.25 44.68 2.71
673 677 5.886474 AGGTCTCATCGACATAGACTTAACA 59.114 40.000 18.01 0.00 44.68 2.41
674 678 6.380095 AGGTCTCATCGACATAGACTTAAC 57.620 41.667 18.01 6.57 44.68 2.01
682 686 5.938710 GGTGTATCTAGGTCTCATCGACATA 59.061 44.000 0.00 0.00 44.68 2.29
683 687 4.762765 GGTGTATCTAGGTCTCATCGACAT 59.237 45.833 0.00 0.00 44.68 3.06
684 688 4.135306 GGTGTATCTAGGTCTCATCGACA 58.865 47.826 0.00 0.00 44.68 4.35
685 689 3.502979 GGGTGTATCTAGGTCTCATCGAC 59.497 52.174 0.00 0.00 42.07 4.20
686 690 3.394940 AGGGTGTATCTAGGTCTCATCGA 59.605 47.826 0.00 0.00 0.00 3.59
687 691 3.754323 GAGGGTGTATCTAGGTCTCATCG 59.246 52.174 0.00 0.00 0.00 3.84
688 692 4.730966 TGAGGGTGTATCTAGGTCTCATC 58.269 47.826 0.00 0.00 0.00 2.92
689 693 4.816048 TGAGGGTGTATCTAGGTCTCAT 57.184 45.455 0.00 0.00 0.00 2.90
690 694 4.229812 TCTTGAGGGTGTATCTAGGTCTCA 59.770 45.833 0.00 0.00 0.00 3.27
691 695 4.794334 TCTTGAGGGTGTATCTAGGTCTC 58.206 47.826 0.00 0.00 0.00 3.36
692 696 4.883021 TCTTGAGGGTGTATCTAGGTCT 57.117 45.455 0.00 0.00 0.00 3.85
693 697 5.934402 TTTCTTGAGGGTGTATCTAGGTC 57.066 43.478 0.00 0.00 0.00 3.85
694 698 6.697641 TTTTTCTTGAGGGTGTATCTAGGT 57.302 37.500 0.00 0.00 0.00 3.08
695 699 9.681062 TTTATTTTTCTTGAGGGTGTATCTAGG 57.319 33.333 0.00 0.00 0.00 3.02
720 724 7.812191 TGATTGCGCTTACATATCTTTGTTTTT 59.188 29.630 9.73 0.00 0.00 1.94
752 756 2.604969 TAATTGAGTTTGCGCCGAAC 57.395 45.000 4.18 10.44 0.00 3.95
792 796 7.483307 CAATGTTTGTTTCCATCCGATTCTAT 58.517 34.615 0.00 0.00 0.00 1.98
793 797 6.624861 GCAATGTTTGTTTCCATCCGATTCTA 60.625 38.462 0.00 0.00 0.00 2.10
800 1555 5.945466 AATTGCAATGTTTGTTTCCATCC 57.055 34.783 13.82 0.00 0.00 3.51
805 1560 9.934190 AAATCACTTAATTGCAATGTTTGTTTC 57.066 25.926 13.82 0.00 0.00 2.78
822 1577 3.020984 GCGGAAATGGGGAAATCACTTA 58.979 45.455 0.00 0.00 0.00 2.24
861 1616 2.771763 CTTCTTCAGTCACGGCCGCT 62.772 60.000 28.58 12.20 0.00 5.52
1821 2646 1.621301 CGTTGAGCTGCTTCCACTCG 61.621 60.000 2.53 2.57 32.98 4.18
1995 2820 2.593436 ACGGCGTCCCCAAAGTTG 60.593 61.111 6.77 0.00 0.00 3.16
2043 2868 6.327279 TCGTACATATCAAGAATCCGTGAT 57.673 37.500 0.00 3.08 42.61 3.06
2127 2952 4.926860 TGCTTGAACATCACTGATTACG 57.073 40.909 0.00 0.00 0.00 3.18
2226 3051 2.361610 CCAGCCGTCATTGCCCTT 60.362 61.111 0.00 0.00 0.00 3.95
2364 3189 3.378742 CCGTATCCTGATCCTTATCCTCG 59.621 52.174 0.00 0.00 0.00 4.63
2664 3492 1.757118 CCACTCCCATGTACATCGTCT 59.243 52.381 5.07 0.00 0.00 4.18
2952 3780 5.752036 AATCAGACAATTGACTCTCCAGA 57.248 39.130 13.59 4.97 0.00 3.86
2997 3825 0.895530 TTCTCCTAGAGTGGTTGGCG 59.104 55.000 0.00 0.00 0.00 5.69
3085 3914 4.501071 ACAGATACCGTGTGTATGGAAAC 58.499 43.478 0.00 0.00 40.31 2.78
3133 3962 7.940137 TGGTTTGTATCACAGTATTGTAAAGGT 59.060 33.333 0.00 0.00 35.25 3.50
3171 4000 3.888934 CACACCATGCAAAAGTAGACAC 58.111 45.455 0.00 0.00 0.00 3.67
3270 4099 9.952030 TTCAATGTCTTATGTAGTACCAAATGA 57.048 29.630 0.00 0.00 0.00 2.57
3298 4129 2.035449 AGTCGAACAAGATCACGGTGAA 59.965 45.455 15.72 0.00 0.00 3.18
3345 4176 2.897846 CACGGGCACGGTTGAACA 60.898 61.111 15.46 0.00 46.48 3.18
3375 4206 9.092876 TCAACATTTCAACCAACAATTCTAAAC 57.907 29.630 0.00 0.00 0.00 2.01
3426 4257 7.972832 ACAAACTAATTCGACCATGAAGTAA 57.027 32.000 0.00 0.00 29.18 2.24
3427 4258 7.972832 AACAAACTAATTCGACCATGAAGTA 57.027 32.000 0.00 0.00 0.00 2.24
3439 4271 8.237267 CCACCACTTCTGATAACAAACTAATTC 58.763 37.037 0.00 0.00 0.00 2.17
3518 4350 5.659440 TCTTTAAATGAACCAGCCATTCC 57.341 39.130 0.00 0.00 33.51 3.01
3537 4369 8.150945 ACACTTATCACATGTCAAGTAGTTCTT 58.849 33.333 13.78 0.00 36.75 2.52
3668 7736 2.033801 GCAGGCTTACAGGCACATAATG 59.966 50.000 0.00 0.00 44.19 1.90
3692 12071 4.713321 CCAGGTCAGGGATTTGAAATCATT 59.287 41.667 18.55 4.21 0.00 2.57
3727 12106 2.484264 GGCAATCTAGCGAAACACAGTT 59.516 45.455 0.00 0.00 34.64 3.16
3732 12111 2.418368 ATGGGCAATCTAGCGAAACA 57.582 45.000 0.00 0.00 34.64 2.83
3803 12182 9.716531 AACCTTATACAGTTTTAGTAGTTGGAC 57.283 33.333 0.00 0.00 0.00 4.02
3827 12260 8.780552 GCACAGGCAATGTTGAGATAATTCAAC 61.781 40.741 10.97 10.97 46.33 3.18
3828 12261 6.623486 CACAGGCAATGTTGAGATAATTCAA 58.377 36.000 0.00 0.00 41.41 2.69
3829 12262 5.393352 GCACAGGCAATGTTGAGATAATTCA 60.393 40.000 0.00 0.00 41.41 2.57
3830 12263 5.039333 GCACAGGCAATGTTGAGATAATTC 58.961 41.667 0.00 0.00 41.41 2.17
3831 12264 4.142093 GGCACAGGCAATGTTGAGATAATT 60.142 41.667 0.00 0.00 41.41 1.40
3832 12265 3.382546 GGCACAGGCAATGTTGAGATAAT 59.617 43.478 0.00 0.00 41.41 1.28
3833 12266 2.754552 GGCACAGGCAATGTTGAGATAA 59.245 45.455 0.00 0.00 41.41 1.75
3834 12267 2.025981 AGGCACAGGCAATGTTGAGATA 60.026 45.455 0.00 0.00 41.41 1.98
3835 12268 1.180029 GGCACAGGCAATGTTGAGAT 58.820 50.000 0.00 0.00 41.41 2.75
3836 12269 0.111061 AGGCACAGGCAATGTTGAGA 59.889 50.000 0.00 0.00 41.41 3.27
3837 12270 0.242825 CAGGCACAGGCAATGTTGAG 59.757 55.000 0.00 0.00 41.41 3.02
3838 12271 0.467844 ACAGGCACAGGCAATGTTGA 60.468 50.000 0.00 0.00 41.41 3.18
3839 12272 0.038892 GACAGGCACAGGCAATGTTG 60.039 55.000 0.00 0.00 41.41 3.33
3840 12273 0.467844 TGACAGGCACAGGCAATGTT 60.468 50.000 0.00 0.00 41.41 2.71
3841 12274 0.467844 TTGACAGGCACAGGCAATGT 60.468 50.000 0.00 0.00 45.43 2.71
3842 12275 0.892755 ATTGACAGGCACAGGCAATG 59.107 50.000 5.11 0.00 43.71 2.82
3843 12276 2.512692 TATTGACAGGCACAGGCAAT 57.487 45.000 9.97 9.97 43.71 3.56
3844 12277 2.161855 CTTATTGACAGGCACAGGCAA 58.838 47.619 0.00 0.00 43.71 4.52
3845 12278 1.350684 TCTTATTGACAGGCACAGGCA 59.649 47.619 0.00 0.00 43.71 4.75
3846 12279 2.113860 TCTTATTGACAGGCACAGGC 57.886 50.000 0.00 0.00 40.13 4.85
3847 12280 4.012374 ACAATCTTATTGACAGGCACAGG 58.988 43.478 6.64 0.00 0.00 4.00
3848 12281 5.181811 TCAACAATCTTATTGACAGGCACAG 59.818 40.000 6.64 0.00 29.89 3.66
3849 12282 5.069318 TCAACAATCTTATTGACAGGCACA 58.931 37.500 6.64 0.00 29.89 4.57
3850 12283 5.392380 CCTCAACAATCTTATTGACAGGCAC 60.392 44.000 6.64 0.00 31.62 5.01
3851 12284 4.701651 CCTCAACAATCTTATTGACAGGCA 59.298 41.667 6.64 0.00 31.62 4.75
3852 12285 4.702131 ACCTCAACAATCTTATTGACAGGC 59.298 41.667 6.64 0.00 31.62 4.85
3853 12286 6.824305 AACCTCAACAATCTTATTGACAGG 57.176 37.500 6.64 9.59 31.62 4.00
3854 12287 7.965107 GCTTAACCTCAACAATCTTATTGACAG 59.035 37.037 6.64 0.14 31.62 3.51
3855 12288 7.446931 TGCTTAACCTCAACAATCTTATTGACA 59.553 33.333 6.64 0.00 31.62 3.58
3856 12289 7.816640 TGCTTAACCTCAACAATCTTATTGAC 58.183 34.615 6.64 0.00 31.62 3.18
3857 12290 7.994425 TGCTTAACCTCAACAATCTTATTGA 57.006 32.000 6.64 0.00 33.82 2.57
3858 12291 9.643693 AAATGCTTAACCTCAACAATCTTATTG 57.356 29.630 0.00 0.00 0.00 1.90
3861 12294 9.515226 AGTAAATGCTTAACCTCAACAATCTTA 57.485 29.630 0.00 0.00 0.00 2.10
3862 12295 8.409358 AGTAAATGCTTAACCTCAACAATCTT 57.591 30.769 0.00 0.00 0.00 2.40
3863 12296 9.686683 ATAGTAAATGCTTAACCTCAACAATCT 57.313 29.630 0.00 0.00 0.00 2.40
3867 12300 9.727859 TGTAATAGTAAATGCTTAACCTCAACA 57.272 29.630 0.00 0.00 0.00 3.33
3872 12305 9.338622 GGTCATGTAATAGTAAATGCTTAACCT 57.661 33.333 0.00 0.00 0.00 3.50
3873 12306 9.116067 TGGTCATGTAATAGTAAATGCTTAACC 57.884 33.333 0.00 0.00 0.00 2.85
3911 12344 3.641437 TTTTCCAGATTTGCAGGTTCG 57.359 42.857 0.00 0.00 0.00 3.95
3984 12417 2.938428 AAGAGGTGGGTCTGAGAGAT 57.062 50.000 0.00 0.00 0.00 2.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.