Multiple sequence alignment - TraesCS7D01G124400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G124400 chr7D 100.000 3355 0 0 1 3355 78043015 78039661 0.000000e+00 6196
1 TraesCS7D01G124400 chr7D 100.000 1648 0 0 3548 5195 78039468 78037821 0.000000e+00 3044
2 TraesCS7D01G124400 chr7D 94.752 343 11 6 1 343 77333435 77333770 1.280000e-145 527
3 TraesCS7D01G124400 chr7D 96.183 262 10 0 341 602 96378914 96378653 3.720000e-116 429
4 TraesCS7D01G124400 chr7B 94.132 2778 83 36 639 3355 25326021 25323263 0.000000e+00 4154
5 TraesCS7D01G124400 chr7B 95.914 1542 28 11 3672 5195 25322448 25320924 0.000000e+00 2466
6 TraesCS7D01G124400 chr7B 97.541 122 3 0 3560 3681 25323100 25322979 5.270000e-50 209
7 TraesCS7D01G124400 chr7A 92.294 2764 95 48 613 3322 81502085 81499386 0.000000e+00 3816
8 TraesCS7D01G124400 chr7A 92.879 1671 67 19 3565 5195 81499190 81497532 0.000000e+00 2379
9 TraesCS7D01G124400 chr5B 87.380 523 51 10 2791 3305 315169752 315169237 2.080000e-163 586
10 TraesCS7D01G124400 chr3D 95.044 343 10 6 1 343 90214160 90213825 2.750000e-147 532
11 TraesCS7D01G124400 chr2D 97.015 268 7 1 341 608 647763099 647763365 2.850000e-122 449
12 TraesCS7D01G124400 chr2D 97.318 261 7 0 342 602 623492236 623492496 1.330000e-120 444
13 TraesCS7D01G124400 chrUn 97.318 261 7 0 342 602 24269871 24270131 1.330000e-120 444
14 TraesCS7D01G124400 chrUn 96.947 262 8 0 341 602 92971132 92970871 1.720000e-119 440
15 TraesCS7D01G124400 chr6D 96.604 265 8 1 339 602 141141493 141141757 6.180000e-119 438
16 TraesCS7D01G124400 chr5D 96.935 261 8 0 342 602 485912582 485912322 6.180000e-119 438
17 TraesCS7D01G124400 chr5D 86.992 246 15 7 1661 1892 123296931 123296689 1.430000e-65 261
18 TraesCS7D01G124400 chr5A 95.539 269 11 1 338 605 564601736 564602004 3.720000e-116 429
19 TraesCS7D01G124400 chr5A 87.398 246 14 6 1661 1892 511920310 511920068 3.080000e-67 267
20 TraesCS7D01G124400 chr4A 94.834 271 12 2 334 602 722895467 722895737 6.220000e-114 422
21 TraesCS7D01G124400 chr4A 87.083 240 14 9 1664 1889 588443059 588443295 6.680000e-64 255
22 TraesCS7D01G124400 chr4A 80.093 216 28 10 4898 5103 655628557 655628347 4.190000e-31 147
23 TraesCS7D01G124400 chr4B 85.057 348 36 12 1 343 33803961 33803625 1.790000e-89 340
24 TraesCS7D01G124400 chr4B 88.017 242 13 7 1661 1889 589783670 589783908 6.630000e-69 272
25 TraesCS7D01G124400 chr4B 82.703 185 25 6 4897 5075 417542835 417542652 1.940000e-34 158
26 TraesCS7D01G124400 chr6B 87.805 246 13 4 1661 1892 651364108 651363866 6.630000e-69 272
27 TraesCS7D01G124400 chr6B 87.654 243 13 4 1661 1889 671660174 671660413 3.080000e-67 267
28 TraesCS7D01G124400 chr6B 86.585 246 16 4 1661 1892 76225257 76225015 6.680000e-64 255
29 TraesCS7D01G124400 chr6B 88.350 103 12 0 1084 1186 708625533 708625431 1.960000e-24 124
30 TraesCS7D01G124400 chr6A 88.066 243 12 8 1661 1889 413093861 413094100 6.630000e-69 272
31 TraesCS7D01G124400 chr6A 88.000 100 12 0 1084 1183 611293816 611293717 9.140000e-23 119
32 TraesCS7D01G124400 chr3B 87.654 243 13 4 1661 1889 748488041 748488280 3.080000e-67 267
33 TraesCS7D01G124400 chr2A 87.654 243 13 6 1661 1889 92186495 92186734 3.080000e-67 267
34 TraesCS7D01G124400 chr3A 86.992 246 15 8 1661 1892 103438760 103438518 1.430000e-65 261
35 TraesCS7D01G124400 chr3A 81.481 216 27 7 4897 5103 628865399 628865610 1.160000e-36 165
36 TraesCS7D01G124400 chr3A 79.717 212 26 10 4897 5103 697509142 697509341 2.520000e-28 137
37 TraesCS7D01G124400 chr1B 73.989 569 146 2 2583 3150 156853515 156852948 4.050000e-56 230
38 TraesCS7D01G124400 chr1D 73.675 566 147 2 2583 3147 95866028 95866592 8.760000e-53 219
39 TraesCS7D01G124400 chr1D 83.099 213 21 10 4900 5103 316208032 316207826 4.130000e-41 180
40 TraesCS7D01G124400 chr1D 91.525 118 1 4 85 196 464269170 464269056 2.510000e-33 154
41 TraesCS7D01G124400 chr1A 73.498 566 148 2 2583 3147 91160541 91161105 4.070000e-51 213
42 TraesCS7D01G124400 chr1A 79.812 213 28 12 4898 5103 397056122 397055918 1.950000e-29 141
43 TraesCS7D01G124400 chr2B 79.909 219 30 12 4898 5106 134707506 134707292 1.170000e-31 148


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G124400 chr7D 78037821 78043015 5194 True 4620.000000 6196 100.000000 1 5195 2 chr7D.!!$R2 5194
1 TraesCS7D01G124400 chr7B 25320924 25326021 5097 True 2276.333333 4154 95.862333 639 5195 3 chr7B.!!$R1 4556
2 TraesCS7D01G124400 chr7A 81497532 81502085 4553 True 3097.500000 3816 92.586500 613 5195 2 chr7A.!!$R1 4582
3 TraesCS7D01G124400 chr5B 315169237 315169752 515 True 586.000000 586 87.380000 2791 3305 1 chr5B.!!$R1 514
4 TraesCS7D01G124400 chr1B 156852948 156853515 567 True 230.000000 230 73.989000 2583 3150 1 chr1B.!!$R1 567
5 TraesCS7D01G124400 chr1D 95866028 95866592 564 False 219.000000 219 73.675000 2583 3147 1 chr1D.!!$F1 564
6 TraesCS7D01G124400 chr1A 91160541 91161105 564 False 213.000000 213 73.498000 2583 3147 1 chr1A.!!$F1 564

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
981 1007 0.031414 GGCTTACTCTCCCCTACCCA 60.031 60.000 0.0 0.0 0.00 4.51 F
1235 1287 0.584054 CGCGTGCGTCAATAGCTTTC 60.584 55.000 6.0 0.0 35.28 2.62 F
2020 2099 2.097304 TGCACGGAACATACATGAATGC 59.903 45.455 0.0 0.0 0.00 3.56 F
3159 3259 2.308570 TCACCAGGTATGCCTTCATTGT 59.691 45.455 0.0 0.0 44.18 2.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2057 2136 2.368548 TGTGGCTGACAAGTATCACACT 59.631 45.455 0.0 0.0 40.05 3.55 R
2539 2624 5.992729 TCAGTTAAATGCCAAACGTACTTC 58.007 37.500 0.0 0.0 0.00 3.01 R
3557 3658 3.302415 GCACTTCATTTTCCACAAAACGC 60.302 43.478 0.0 0.0 34.24 4.84 R
4746 5411 2.158608 GGGTATCAGGAGTTCATTGGGG 60.159 54.545 0.0 0.0 0.00 4.96 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 3.499737 GCCTTGACCGGCGTGATG 61.500 66.667 6.01 0.00 40.79 3.07
37 38 2.819595 CCTTGACCGGCGTGATGG 60.820 66.667 6.01 0.00 0.00 3.51
38 39 2.264480 CTTGACCGGCGTGATGGA 59.736 61.111 6.01 0.00 0.00 3.41
39 40 1.375396 CTTGACCGGCGTGATGGAA 60.375 57.895 6.01 0.00 0.00 3.53
40 41 1.361668 CTTGACCGGCGTGATGGAAG 61.362 60.000 6.01 0.00 0.00 3.46
41 42 3.195698 GACCGGCGTGATGGAAGC 61.196 66.667 6.01 0.00 0.00 3.86
44 45 3.554692 CGGCGTGATGGAAGCGTC 61.555 66.667 0.00 0.00 0.00 5.19
45 46 3.195698 GGCGTGATGGAAGCGTCC 61.196 66.667 12.27 12.27 45.21 4.79
46 47 2.125512 GCGTGATGGAAGCGTCCT 60.126 61.111 19.81 5.34 45.22 3.85
47 48 1.741770 GCGTGATGGAAGCGTCCTT 60.742 57.895 19.81 13.48 45.22 3.36
48 49 1.298859 GCGTGATGGAAGCGTCCTTT 61.299 55.000 19.81 7.30 45.22 3.11
49 50 0.443869 CGTGATGGAAGCGTCCTTTG 59.556 55.000 19.81 4.48 45.22 2.77
50 51 0.804989 GTGATGGAAGCGTCCTTTGG 59.195 55.000 19.81 0.00 45.22 3.28
51 52 0.322456 TGATGGAAGCGTCCTTTGGG 60.322 55.000 19.81 0.00 45.22 4.12
52 53 0.035439 GATGGAAGCGTCCTTTGGGA 60.035 55.000 19.81 0.00 45.22 4.37
53 54 0.035056 ATGGAAGCGTCCTTTGGGAG 60.035 55.000 19.81 0.00 45.22 4.30
54 55 2.124507 TGGAAGCGTCCTTTGGGAGG 62.125 60.000 19.81 0.00 45.22 4.30
55 56 1.375326 GAAGCGTCCTTTGGGAGGT 59.625 57.895 6.61 0.00 46.04 3.85
56 57 0.673956 GAAGCGTCCTTTGGGAGGTC 60.674 60.000 6.61 0.66 46.04 3.85
60 61 2.667348 GTCCTTTGGGAGGTCGAGA 58.333 57.895 0.00 0.00 46.39 4.04
61 62 0.974383 GTCCTTTGGGAGGTCGAGAA 59.026 55.000 0.00 0.00 46.39 2.87
62 63 1.555533 GTCCTTTGGGAGGTCGAGAAT 59.444 52.381 0.00 0.00 46.39 2.40
63 64 1.831736 TCCTTTGGGAGGTCGAGAATC 59.168 52.381 0.00 0.00 46.39 2.52
74 75 4.663444 GAGAATCGATGGAGGCGG 57.337 61.111 0.00 0.00 0.00 6.13
75 76 1.742768 GAGAATCGATGGAGGCGGT 59.257 57.895 0.00 0.00 0.00 5.68
76 77 0.598680 GAGAATCGATGGAGGCGGTG 60.599 60.000 0.00 0.00 0.00 4.94
77 78 1.595382 GAATCGATGGAGGCGGTGG 60.595 63.158 0.00 0.00 0.00 4.61
78 79 3.757248 AATCGATGGAGGCGGTGGC 62.757 63.158 0.00 0.00 38.90 5.01
87 88 3.755628 GGCGGTGGCGACTGTCTA 61.756 66.667 9.59 0.00 41.24 2.59
88 89 2.202623 GCGGTGGCGACTGTCTAG 60.203 66.667 9.59 0.00 0.00 2.43
89 90 2.490217 CGGTGGCGACTGTCTAGG 59.510 66.667 6.21 0.00 0.00 3.02
90 91 2.044555 CGGTGGCGACTGTCTAGGA 61.045 63.158 6.21 0.00 0.00 2.94
91 92 1.384989 CGGTGGCGACTGTCTAGGAT 61.385 60.000 6.21 0.00 0.00 3.24
92 93 0.103208 GGTGGCGACTGTCTAGGATG 59.897 60.000 6.21 0.00 0.00 3.51
93 94 1.103803 GTGGCGACTGTCTAGGATGA 58.896 55.000 6.21 0.00 0.00 2.92
94 95 1.066303 GTGGCGACTGTCTAGGATGAG 59.934 57.143 6.21 0.00 0.00 2.90
95 96 0.031449 GGCGACTGTCTAGGATGAGC 59.969 60.000 6.21 0.00 0.00 4.26
96 97 0.317436 GCGACTGTCTAGGATGAGCG 60.317 60.000 6.21 0.00 0.00 5.03
97 98 0.309302 CGACTGTCTAGGATGAGCGG 59.691 60.000 6.21 0.00 0.00 5.52
98 99 0.031449 GACTGTCTAGGATGAGCGGC 59.969 60.000 0.00 0.00 0.00 6.53
99 100 1.007964 CTGTCTAGGATGAGCGGCG 60.008 63.158 0.51 0.51 0.00 6.46
100 101 2.355244 GTCTAGGATGAGCGGCGC 60.355 66.667 26.86 26.86 0.00 6.53
101 102 3.966104 TCTAGGATGAGCGGCGCG 61.966 66.667 27.59 9.67 0.00 6.86
119 120 2.829003 CGTGCGGAGAGAGGGCTA 60.829 66.667 0.00 0.00 0.00 3.93
120 121 2.809010 GTGCGGAGAGAGGGCTAC 59.191 66.667 0.00 0.00 0.00 3.58
121 122 2.829003 TGCGGAGAGAGGGCTACG 60.829 66.667 0.00 0.00 44.95 3.51
122 123 3.597728 GCGGAGAGAGGGCTACGG 61.598 72.222 0.00 0.00 42.44 4.02
123 124 3.597728 CGGAGAGAGGGCTACGGC 61.598 72.222 0.00 0.00 38.56 5.68
124 125 3.597728 GGAGAGAGGGCTACGGCG 61.598 72.222 4.80 4.80 39.81 6.46
125 126 2.829458 GAGAGAGGGCTACGGCGT 60.829 66.667 19.64 19.64 39.81 5.68
126 127 3.127352 GAGAGAGGGCTACGGCGTG 62.127 68.421 24.86 13.74 39.81 5.34
127 128 4.208686 GAGAGGGCTACGGCGTGG 62.209 72.222 24.86 22.17 39.81 4.94
134 135 3.467226 CTACGGCGTGGGTGGGAT 61.467 66.667 24.86 0.00 0.00 3.85
135 136 2.043147 TACGGCGTGGGTGGGATA 60.043 61.111 24.86 0.00 0.00 2.59
136 137 2.083835 CTACGGCGTGGGTGGGATAG 62.084 65.000 24.86 4.33 0.00 2.08
137 138 4.235762 CGGCGTGGGTGGGATAGG 62.236 72.222 0.00 0.00 0.00 2.57
138 139 4.564110 GGCGTGGGTGGGATAGGC 62.564 72.222 0.00 0.00 0.00 3.93
139 140 3.792736 GCGTGGGTGGGATAGGCA 61.793 66.667 0.00 0.00 0.00 4.75
140 141 2.505982 CGTGGGTGGGATAGGCAG 59.494 66.667 0.00 0.00 0.00 4.85
141 142 2.063979 CGTGGGTGGGATAGGCAGA 61.064 63.158 0.00 0.00 0.00 4.26
142 143 1.622607 CGTGGGTGGGATAGGCAGAA 61.623 60.000 0.00 0.00 0.00 3.02
143 144 0.623723 GTGGGTGGGATAGGCAGAAA 59.376 55.000 0.00 0.00 0.00 2.52
144 145 1.005450 GTGGGTGGGATAGGCAGAAAA 59.995 52.381 0.00 0.00 0.00 2.29
145 146 1.284785 TGGGTGGGATAGGCAGAAAAG 59.715 52.381 0.00 0.00 0.00 2.27
146 147 1.410224 GGGTGGGATAGGCAGAAAAGG 60.410 57.143 0.00 0.00 0.00 3.11
147 148 1.564348 GGTGGGATAGGCAGAAAAGGA 59.436 52.381 0.00 0.00 0.00 3.36
148 149 2.422093 GGTGGGATAGGCAGAAAAGGAG 60.422 54.545 0.00 0.00 0.00 3.69
149 150 1.846439 TGGGATAGGCAGAAAAGGAGG 59.154 52.381 0.00 0.00 0.00 4.30
150 151 1.847088 GGGATAGGCAGAAAAGGAGGT 59.153 52.381 0.00 0.00 0.00 3.85
151 152 2.422093 GGGATAGGCAGAAAAGGAGGTG 60.422 54.545 0.00 0.00 0.00 4.00
152 153 2.422093 GGATAGGCAGAAAAGGAGGTGG 60.422 54.545 0.00 0.00 0.00 4.61
153 154 0.991920 TAGGCAGAAAAGGAGGTGGG 59.008 55.000 0.00 0.00 0.00 4.61
154 155 1.068352 AGGCAGAAAAGGAGGTGGGT 61.068 55.000 0.00 0.00 0.00 4.51
155 156 0.178961 GGCAGAAAAGGAGGTGGGTT 60.179 55.000 0.00 0.00 0.00 4.11
156 157 1.248486 GCAGAAAAGGAGGTGGGTTC 58.752 55.000 0.00 0.00 0.00 3.62
157 158 1.478654 GCAGAAAAGGAGGTGGGTTCA 60.479 52.381 0.00 0.00 0.00 3.18
158 159 2.508526 CAGAAAAGGAGGTGGGTTCAG 58.491 52.381 0.00 0.00 0.00 3.02
159 160 2.136026 AGAAAAGGAGGTGGGTTCAGT 58.864 47.619 0.00 0.00 0.00 3.41
160 161 2.514160 AGAAAAGGAGGTGGGTTCAGTT 59.486 45.455 0.00 0.00 0.00 3.16
161 162 2.364972 AAAGGAGGTGGGTTCAGTTG 57.635 50.000 0.00 0.00 0.00 3.16
162 163 0.478507 AAGGAGGTGGGTTCAGTTGG 59.521 55.000 0.00 0.00 0.00 3.77
163 164 0.401395 AGGAGGTGGGTTCAGTTGGA 60.401 55.000 0.00 0.00 0.00 3.53
164 165 0.476771 GGAGGTGGGTTCAGTTGGAA 59.523 55.000 0.00 0.00 0.00 3.53
165 166 1.133606 GGAGGTGGGTTCAGTTGGAAA 60.134 52.381 0.00 0.00 37.23 3.13
166 167 2.661718 GAGGTGGGTTCAGTTGGAAAA 58.338 47.619 0.00 0.00 37.23 2.29
167 168 3.028130 GAGGTGGGTTCAGTTGGAAAAA 58.972 45.455 0.00 0.00 37.23 1.94
194 195 3.813529 GGAACTTGTCCTTCAATCACG 57.186 47.619 0.00 0.00 43.98 4.35
195 196 3.399330 GGAACTTGTCCTTCAATCACGA 58.601 45.455 0.00 0.00 43.98 4.35
196 197 3.813166 GGAACTTGTCCTTCAATCACGAA 59.187 43.478 0.00 0.00 43.98 3.85
197 198 4.083802 GGAACTTGTCCTTCAATCACGAAG 60.084 45.833 0.00 0.00 43.98 3.79
209 210 2.355481 ACGAAGGGACGTGCGTTC 60.355 61.111 26.41 26.41 44.84 3.95
210 211 3.467119 CGAAGGGACGTGCGTTCG 61.467 66.667 37.11 37.11 36.22 3.95
211 212 2.355481 GAAGGGACGTGCGTTCGT 60.355 61.111 23.35 6.72 46.88 3.85
212 213 2.654912 GAAGGGACGTGCGTTCGTG 61.655 63.158 23.35 0.00 44.21 4.35
213 214 4.657824 AGGGACGTGCGTTCGTGG 62.658 66.667 11.15 0.00 44.21 4.94
215 216 4.955774 GGACGTGCGTTCGTGGGT 62.956 66.667 11.15 0.00 44.21 4.51
216 217 2.963320 GACGTGCGTTCGTGGGTT 60.963 61.111 11.15 0.00 44.21 4.11
217 218 3.218209 GACGTGCGTTCGTGGGTTG 62.218 63.158 11.15 0.00 44.21 3.77
218 219 3.266376 CGTGCGTTCGTGGGTTGT 61.266 61.111 0.00 0.00 0.00 3.32
219 220 2.326550 GTGCGTTCGTGGGTTGTG 59.673 61.111 0.00 0.00 0.00 3.33
220 221 2.125065 TGCGTTCGTGGGTTGTGT 60.125 55.556 0.00 0.00 0.00 3.72
221 222 1.745864 TGCGTTCGTGGGTTGTGTT 60.746 52.632 0.00 0.00 0.00 3.32
222 223 1.306642 TGCGTTCGTGGGTTGTGTTT 61.307 50.000 0.00 0.00 0.00 2.83
223 224 0.656785 GCGTTCGTGGGTTGTGTTTA 59.343 50.000 0.00 0.00 0.00 2.01
224 225 1.264826 GCGTTCGTGGGTTGTGTTTAT 59.735 47.619 0.00 0.00 0.00 1.40
225 226 2.287129 GCGTTCGTGGGTTGTGTTTATT 60.287 45.455 0.00 0.00 0.00 1.40
226 227 3.792794 GCGTTCGTGGGTTGTGTTTATTT 60.793 43.478 0.00 0.00 0.00 1.40
227 228 4.352887 CGTTCGTGGGTTGTGTTTATTTT 58.647 39.130 0.00 0.00 0.00 1.82
228 229 4.799428 CGTTCGTGGGTTGTGTTTATTTTT 59.201 37.500 0.00 0.00 0.00 1.94
250 251 8.773404 TTTTTATTTTTGGTTTGTTTCCTCGA 57.227 26.923 0.00 0.00 0.00 4.04
251 252 7.995463 TTTATTTTTGGTTTGTTTCCTCGAG 57.005 32.000 5.13 5.13 0.00 4.04
252 253 3.430333 TTTTGGTTTGTTTCCTCGAGC 57.570 42.857 6.99 0.00 0.00 5.03
253 254 0.941542 TTGGTTTGTTTCCTCGAGCG 59.058 50.000 6.99 0.19 0.00 5.03
254 255 0.105224 TGGTTTGTTTCCTCGAGCGA 59.895 50.000 6.99 2.98 0.00 4.93
255 256 0.790814 GGTTTGTTTCCTCGAGCGAG 59.209 55.000 6.99 12.66 41.63 5.03
265 266 2.791383 CTCGAGCGAGGATGAGAATT 57.209 50.000 11.83 0.00 38.51 2.17
266 267 2.392821 CTCGAGCGAGGATGAGAATTG 58.607 52.381 11.83 0.00 38.51 2.32
267 268 1.751351 TCGAGCGAGGATGAGAATTGT 59.249 47.619 0.00 0.00 0.00 2.71
268 269 2.123342 CGAGCGAGGATGAGAATTGTC 58.877 52.381 0.00 0.00 0.00 3.18
269 270 2.123342 GAGCGAGGATGAGAATTGTCG 58.877 52.381 0.00 0.00 0.00 4.35
270 271 1.202463 AGCGAGGATGAGAATTGTCGG 60.202 52.381 0.00 0.00 0.00 4.79
271 272 1.471676 GCGAGGATGAGAATTGTCGGT 60.472 52.381 0.00 0.00 0.00 4.69
272 273 2.223735 GCGAGGATGAGAATTGTCGGTA 60.224 50.000 0.00 0.00 0.00 4.02
273 274 3.372954 CGAGGATGAGAATTGTCGGTAC 58.627 50.000 0.00 0.00 0.00 3.34
274 275 3.181490 CGAGGATGAGAATTGTCGGTACA 60.181 47.826 0.00 0.00 0.00 2.90
283 284 1.434555 TTGTCGGTACAAAGGATGCG 58.565 50.000 0.00 0.00 42.60 4.73
284 285 0.390603 TGTCGGTACAAAGGATGCGG 60.391 55.000 0.00 0.00 30.91 5.69
285 286 1.087771 GTCGGTACAAAGGATGCGGG 61.088 60.000 0.00 0.00 0.00 6.13
286 287 1.219664 CGGTACAAAGGATGCGGGA 59.780 57.895 0.00 0.00 0.00 5.14
287 288 0.810031 CGGTACAAAGGATGCGGGAG 60.810 60.000 0.00 0.00 0.00 4.30
288 289 0.463833 GGTACAAAGGATGCGGGAGG 60.464 60.000 0.00 0.00 0.00 4.30
289 290 0.252197 GTACAAAGGATGCGGGAGGT 59.748 55.000 0.00 0.00 0.00 3.85
290 291 0.251916 TACAAAGGATGCGGGAGGTG 59.748 55.000 0.00 0.00 0.00 4.00
291 292 1.750399 CAAAGGATGCGGGAGGTGG 60.750 63.158 0.00 0.00 0.00 4.61
292 293 2.983879 AAAGGATGCGGGAGGTGGG 61.984 63.158 0.00 0.00 0.00 4.61
293 294 3.943137 AAGGATGCGGGAGGTGGGA 62.943 63.158 0.00 0.00 0.00 4.37
294 295 3.171388 GGATGCGGGAGGTGGGAT 61.171 66.667 0.00 0.00 0.00 3.85
295 296 2.427753 GATGCGGGAGGTGGGATC 59.572 66.667 0.00 0.00 0.00 3.36
296 297 3.521529 GATGCGGGAGGTGGGATCG 62.522 68.421 0.00 0.00 0.00 3.69
297 298 4.770362 TGCGGGAGGTGGGATCGA 62.770 66.667 0.00 0.00 0.00 3.59
298 299 3.467226 GCGGGAGGTGGGATCGAA 61.467 66.667 0.00 0.00 0.00 3.71
299 300 2.815308 CGGGAGGTGGGATCGAAG 59.185 66.667 0.00 0.00 0.00 3.79
300 301 2.797278 CGGGAGGTGGGATCGAAGG 61.797 68.421 0.00 0.00 0.00 3.46
301 302 1.382695 GGGAGGTGGGATCGAAGGA 60.383 63.158 0.00 0.00 0.00 3.36
302 303 1.403687 GGGAGGTGGGATCGAAGGAG 61.404 65.000 0.00 0.00 0.00 3.69
303 304 1.403687 GGAGGTGGGATCGAAGGAGG 61.404 65.000 0.00 0.00 0.00 4.30
304 305 0.688087 GAGGTGGGATCGAAGGAGGT 60.688 60.000 0.00 0.00 0.00 3.85
305 306 0.688087 AGGTGGGATCGAAGGAGGTC 60.688 60.000 0.00 0.00 0.00 3.85
306 307 1.437986 GTGGGATCGAAGGAGGTCG 59.562 63.158 0.00 0.00 42.48 4.79
311 312 3.271014 TCGAAGGAGGTCGAACCG 58.729 61.111 0.00 0.00 46.52 4.44
312 313 1.302752 TCGAAGGAGGTCGAACCGA 60.303 57.895 0.00 0.00 46.52 4.69
313 314 0.890542 TCGAAGGAGGTCGAACCGAA 60.891 55.000 0.00 0.00 46.52 4.30
314 315 0.731855 CGAAGGAGGTCGAACCGAAC 60.732 60.000 0.00 0.00 44.90 3.95
315 316 0.389556 GAAGGAGGTCGAACCGAACC 60.390 60.000 0.00 0.00 45.54 3.62
316 317 1.117142 AAGGAGGTCGAACCGAACCA 61.117 55.000 0.00 0.00 45.54 3.67
317 318 0.903454 AGGAGGTCGAACCGAACCAT 60.903 55.000 0.00 0.00 45.54 3.55
318 319 0.459759 GGAGGTCGAACCGAACCATC 60.460 60.000 0.00 0.00 45.54 3.51
319 320 0.245539 GAGGTCGAACCGAACCATCA 59.754 55.000 0.00 0.00 45.54 3.07
320 321 0.902531 AGGTCGAACCGAACCATCAT 59.097 50.000 0.00 0.00 45.54 2.45
321 322 1.006832 GGTCGAACCGAACCATCATG 58.993 55.000 0.00 0.00 37.65 3.07
322 323 1.404986 GGTCGAACCGAACCATCATGA 60.405 52.381 0.00 0.00 37.65 3.07
323 324 1.659098 GTCGAACCGAACCATCATGAC 59.341 52.381 0.00 0.00 37.72 3.06
324 325 0.645355 CGAACCGAACCATCATGACG 59.355 55.000 0.00 0.00 0.00 4.35
325 326 1.722011 GAACCGAACCATCATGACGT 58.278 50.000 0.00 0.00 0.00 4.34
326 327 2.073816 GAACCGAACCATCATGACGTT 58.926 47.619 9.24 9.24 0.00 3.99
327 328 1.722011 ACCGAACCATCATGACGTTC 58.278 50.000 20.32 20.32 33.98 3.95
331 332 3.843426 GAACCATCATGACGTTCGATC 57.157 47.619 17.29 1.62 0.00 3.69
332 333 2.225068 ACCATCATGACGTTCGATCC 57.775 50.000 0.00 0.00 0.00 3.36
333 334 1.757118 ACCATCATGACGTTCGATCCT 59.243 47.619 0.00 0.00 0.00 3.24
334 335 2.168521 ACCATCATGACGTTCGATCCTT 59.831 45.455 0.00 0.00 0.00 3.36
335 336 2.797156 CCATCATGACGTTCGATCCTTC 59.203 50.000 0.00 0.00 0.00 3.46
336 337 3.491619 CCATCATGACGTTCGATCCTTCT 60.492 47.826 0.00 0.00 0.00 2.85
337 338 3.868757 TCATGACGTTCGATCCTTCTT 57.131 42.857 0.00 0.00 0.00 2.52
338 339 4.188247 TCATGACGTTCGATCCTTCTTT 57.812 40.909 0.00 0.00 0.00 2.52
339 340 5.319140 TCATGACGTTCGATCCTTCTTTA 57.681 39.130 0.00 0.00 0.00 1.85
340 341 5.716094 TCATGACGTTCGATCCTTCTTTAA 58.284 37.500 0.00 0.00 0.00 1.52
341 342 6.338146 TCATGACGTTCGATCCTTCTTTAAT 58.662 36.000 0.00 0.00 0.00 1.40
342 343 7.485810 TCATGACGTTCGATCCTTCTTTAATA 58.514 34.615 0.00 0.00 0.00 0.98
343 344 7.434307 TCATGACGTTCGATCCTTCTTTAATAC 59.566 37.037 0.00 0.00 0.00 1.89
344 345 6.860080 TGACGTTCGATCCTTCTTTAATACT 58.140 36.000 0.00 0.00 0.00 2.12
345 346 6.971184 TGACGTTCGATCCTTCTTTAATACTC 59.029 38.462 0.00 0.00 0.00 2.59
346 347 6.271566 ACGTTCGATCCTTCTTTAATACTCC 58.728 40.000 0.00 0.00 0.00 3.85
347 348 5.690857 CGTTCGATCCTTCTTTAATACTCCC 59.309 44.000 0.00 0.00 0.00 4.30
348 349 6.461231 CGTTCGATCCTTCTTTAATACTCCCT 60.461 42.308 0.00 0.00 0.00 4.20
349 350 6.651975 TCGATCCTTCTTTAATACTCCCTC 57.348 41.667 0.00 0.00 0.00 4.30
350 351 5.539193 TCGATCCTTCTTTAATACTCCCTCC 59.461 44.000 0.00 0.00 0.00 4.30
351 352 5.565045 CGATCCTTCTTTAATACTCCCTCCG 60.565 48.000 0.00 0.00 0.00 4.63
352 353 4.617593 TCCTTCTTTAATACTCCCTCCGT 58.382 43.478 0.00 0.00 0.00 4.69
353 354 5.028131 TCCTTCTTTAATACTCCCTCCGTT 58.972 41.667 0.00 0.00 0.00 4.44
354 355 5.128335 TCCTTCTTTAATACTCCCTCCGTTC 59.872 44.000 0.00 0.00 0.00 3.95
355 356 5.349061 TTCTTTAATACTCCCTCCGTTCC 57.651 43.478 0.00 0.00 0.00 3.62
356 357 4.355549 TCTTTAATACTCCCTCCGTTCCA 58.644 43.478 0.00 0.00 0.00 3.53
357 358 4.966805 TCTTTAATACTCCCTCCGTTCCAT 59.033 41.667 0.00 0.00 0.00 3.41
358 359 6.138263 TCTTTAATACTCCCTCCGTTCCATA 58.862 40.000 0.00 0.00 0.00 2.74
359 360 6.612456 TCTTTAATACTCCCTCCGTTCCATAA 59.388 38.462 0.00 0.00 0.00 1.90
360 361 7.291651 TCTTTAATACTCCCTCCGTTCCATAAT 59.708 37.037 0.00 0.00 0.00 1.28
361 362 4.891992 ATACTCCCTCCGTTCCATAATG 57.108 45.455 0.00 0.00 0.00 1.90
362 363 2.478292 ACTCCCTCCGTTCCATAATGT 58.522 47.619 0.00 0.00 0.00 2.71
363 364 3.649843 ACTCCCTCCGTTCCATAATGTA 58.350 45.455 0.00 0.00 0.00 2.29
364 365 3.641906 ACTCCCTCCGTTCCATAATGTAG 59.358 47.826 0.00 0.00 0.00 2.74
365 366 3.641906 CTCCCTCCGTTCCATAATGTAGT 59.358 47.826 0.00 0.00 0.00 2.73
366 367 3.386726 TCCCTCCGTTCCATAATGTAGTG 59.613 47.826 0.00 0.00 0.00 2.74
367 368 3.131396 CCTCCGTTCCATAATGTAGTGC 58.869 50.000 0.00 0.00 0.00 4.40
368 369 3.131396 CTCCGTTCCATAATGTAGTGCC 58.869 50.000 0.00 0.00 0.00 5.01
369 370 2.769663 TCCGTTCCATAATGTAGTGCCT 59.230 45.455 0.00 0.00 0.00 4.75
370 371 3.962063 TCCGTTCCATAATGTAGTGCCTA 59.038 43.478 0.00 0.00 0.00 3.93
371 372 4.591498 TCCGTTCCATAATGTAGTGCCTAT 59.409 41.667 0.00 0.00 0.00 2.57
372 373 5.776208 TCCGTTCCATAATGTAGTGCCTATA 59.224 40.000 0.00 0.00 0.00 1.31
373 374 6.071560 TCCGTTCCATAATGTAGTGCCTATAG 60.072 42.308 0.00 0.00 0.00 1.31
374 375 6.071560 CCGTTCCATAATGTAGTGCCTATAGA 60.072 42.308 0.00 0.00 0.00 1.98
375 376 7.363880 CCGTTCCATAATGTAGTGCCTATAGAT 60.364 40.741 0.00 0.00 0.00 1.98
376 377 8.035394 CGTTCCATAATGTAGTGCCTATAGATT 58.965 37.037 0.00 0.00 0.00 2.40
377 378 9.726438 GTTCCATAATGTAGTGCCTATAGATTT 57.274 33.333 0.00 0.00 0.00 2.17
379 380 9.944376 TCCATAATGTAGTGCCTATAGATTTTC 57.056 33.333 0.00 0.00 0.00 2.29
380 381 9.950496 CCATAATGTAGTGCCTATAGATTTTCT 57.050 33.333 0.00 0.00 0.00 2.52
384 385 7.898014 TGTAGTGCCTATAGATTTTCTGAGA 57.102 36.000 0.00 0.00 0.00 3.27
385 386 8.306313 TGTAGTGCCTATAGATTTTCTGAGAA 57.694 34.615 0.00 0.00 0.00 2.87
386 387 8.417106 TGTAGTGCCTATAGATTTTCTGAGAAG 58.583 37.037 0.00 0.00 0.00 2.85
387 388 7.430760 AGTGCCTATAGATTTTCTGAGAAGT 57.569 36.000 0.00 0.00 0.00 3.01
388 389 7.496747 AGTGCCTATAGATTTTCTGAGAAGTC 58.503 38.462 0.00 0.00 0.00 3.01
389 390 7.124901 AGTGCCTATAGATTTTCTGAGAAGTCA 59.875 37.037 0.00 0.00 0.00 3.41
390 391 7.766278 GTGCCTATAGATTTTCTGAGAAGTCAA 59.234 37.037 0.00 0.00 30.14 3.18
391 392 8.321353 TGCCTATAGATTTTCTGAGAAGTCAAA 58.679 33.333 0.00 0.00 30.14 2.69
392 393 8.608317 GCCTATAGATTTTCTGAGAAGTCAAAC 58.392 37.037 0.00 0.00 30.14 2.93
393 394 9.883142 CCTATAGATTTTCTGAGAAGTCAAACT 57.117 33.333 0.00 3.72 30.14 2.66
397 398 7.199078 AGATTTTCTGAGAAGTCAAACTTTGC 58.801 34.615 10.79 0.00 38.80 3.68
398 399 5.895636 TTTCTGAGAAGTCAAACTTTGCA 57.104 34.783 0.00 0.00 38.80 4.08
399 400 5.895636 TTCTGAGAAGTCAAACTTTGCAA 57.104 34.783 0.00 0.00 38.80 4.08
400 401 5.895636 TCTGAGAAGTCAAACTTTGCAAA 57.104 34.783 12.14 12.14 38.80 3.68
401 402 5.640732 TCTGAGAAGTCAAACTTTGCAAAC 58.359 37.500 8.05 0.00 38.80 2.93
402 403 5.415701 TCTGAGAAGTCAAACTTTGCAAACT 59.584 36.000 8.05 0.00 38.80 2.66
403 404 6.024552 TGAGAAGTCAAACTTTGCAAACTT 57.975 33.333 8.05 9.72 38.80 2.66
404 405 6.454795 TGAGAAGTCAAACTTTGCAAACTTT 58.545 32.000 8.05 9.26 38.80 2.66
405 406 6.365789 TGAGAAGTCAAACTTTGCAAACTTTG 59.634 34.615 25.88 25.88 38.80 2.77
406 407 6.454795 AGAAGTCAAACTTTGCAAACTTTGA 58.545 32.000 28.34 28.34 38.80 2.69
407 408 7.099120 AGAAGTCAAACTTTGCAAACTTTGAT 58.901 30.769 31.56 23.42 38.80 2.57
408 409 6.892310 AGTCAAACTTTGCAAACTTTGATC 57.108 33.333 31.56 26.21 35.08 2.92
409 410 6.397272 AGTCAAACTTTGCAAACTTTGATCA 58.603 32.000 31.56 18.01 35.08 2.92
410 411 6.873076 AGTCAAACTTTGCAAACTTTGATCAA 59.127 30.769 31.56 17.76 35.08 2.57
411 412 7.063780 AGTCAAACTTTGCAAACTTTGATCAAG 59.936 33.333 31.56 14.93 35.08 3.02
535 536 9.757227 TGTAAATATTTTTCTCCACAAACTTGG 57.243 29.630 5.91 0.00 38.10 3.61
536 537 9.758651 GTAAATATTTTTCTCCACAAACTTGGT 57.241 29.630 5.91 0.00 37.93 3.67
537 538 8.887036 AAATATTTTTCTCCACAAACTTGGTC 57.113 30.769 0.00 0.00 37.93 4.02
538 539 5.930837 ATTTTTCTCCACAAACTTGGTCA 57.069 34.783 0.00 0.00 37.93 4.02
539 540 5.730296 TTTTTCTCCACAAACTTGGTCAA 57.270 34.783 0.00 0.00 37.93 3.18
540 541 5.730296 TTTTCTCCACAAACTTGGTCAAA 57.270 34.783 0.00 0.00 37.93 2.69
541 542 4.981806 TTCTCCACAAACTTGGTCAAAG 57.018 40.909 0.00 0.00 42.07 2.77
555 556 7.038154 CTTGGTCAAAGTTTATGAGGTTTGA 57.962 36.000 0.00 0.00 36.74 2.69
562 563 8.744652 TCAAAGTTTATGAGGTTTGACTTTTCA 58.255 29.630 0.00 0.00 35.75 2.69
563 564 9.364989 CAAAGTTTATGAGGTTTGACTTTTCAA 57.635 29.630 0.00 0.00 40.14 2.69
592 593 2.910688 AGGCACTACATTATGGGACG 57.089 50.000 0.00 0.00 36.02 4.79
593 594 1.416401 AGGCACTACATTATGGGACGG 59.584 52.381 0.00 0.00 36.02 4.79
594 595 1.414919 GGCACTACATTATGGGACGGA 59.585 52.381 0.00 0.00 0.00 4.69
595 596 2.548067 GGCACTACATTATGGGACGGAG 60.548 54.545 0.00 0.00 0.00 4.63
596 597 2.548067 GCACTACATTATGGGACGGAGG 60.548 54.545 0.00 0.00 0.00 4.30
597 598 2.037251 CACTACATTATGGGACGGAGGG 59.963 54.545 0.00 0.00 0.00 4.30
598 599 2.090943 ACTACATTATGGGACGGAGGGA 60.091 50.000 0.00 0.00 0.00 4.20
599 600 1.424638 ACATTATGGGACGGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30
600 601 1.344087 ACATTATGGGACGGAGGGAGT 60.344 52.381 0.00 0.00 0.00 3.85
601 602 2.090943 ACATTATGGGACGGAGGGAGTA 60.091 50.000 0.00 0.00 0.00 2.59
602 603 2.376695 TTATGGGACGGAGGGAGTAG 57.623 55.000 0.00 0.00 0.00 2.57
603 604 1.229131 TATGGGACGGAGGGAGTAGT 58.771 55.000 0.00 0.00 0.00 2.73
604 605 1.229131 ATGGGACGGAGGGAGTAGTA 58.771 55.000 0.00 0.00 0.00 1.82
605 606 0.549950 TGGGACGGAGGGAGTAGTAG 59.450 60.000 0.00 0.00 0.00 2.57
606 607 0.842635 GGGACGGAGGGAGTAGTAGA 59.157 60.000 0.00 0.00 0.00 2.59
607 608 1.424684 GGGACGGAGGGAGTAGTAGAT 59.575 57.143 0.00 0.00 0.00 1.98
608 609 2.552809 GGGACGGAGGGAGTAGTAGATC 60.553 59.091 0.00 0.00 0.00 2.75
609 610 2.415776 GACGGAGGGAGTAGTAGATCG 58.584 57.143 0.00 0.00 0.00 3.69
610 611 2.036992 GACGGAGGGAGTAGTAGATCGA 59.963 54.545 0.00 0.00 0.00 3.59
611 612 2.437281 ACGGAGGGAGTAGTAGATCGAA 59.563 50.000 0.00 0.00 0.00 3.71
617 618 3.434739 GGGAGTAGTAGATCGAAGGGACA 60.435 52.174 0.00 0.00 0.00 4.02
629 630 7.092716 AGATCGAAGGGACATTTCAAAATTTG 58.907 34.615 0.00 0.00 0.00 2.32
631 632 6.578023 TCGAAGGGACATTTCAAAATTTGTT 58.422 32.000 5.56 0.00 0.00 2.83
633 634 7.650104 TCGAAGGGACATTTCAAAATTTGTTAC 59.350 33.333 5.56 0.00 0.00 2.50
634 635 7.651704 CGAAGGGACATTTCAAAATTTGTTACT 59.348 33.333 5.56 0.00 0.00 2.24
635 636 8.887036 AAGGGACATTTCAAAATTTGTTACTC 57.113 30.769 5.56 0.00 0.00 2.59
636 637 7.441836 AGGGACATTTCAAAATTTGTTACTCC 58.558 34.615 5.56 5.03 0.00 3.85
637 638 7.290014 AGGGACATTTCAAAATTTGTTACTCCT 59.710 33.333 5.56 3.53 0.00 3.69
711 712 0.249489 AGTCCAAGTCAGTGACACGC 60.249 55.000 24.73 9.98 34.60 5.34
835 841 2.361230 CTTTCCGTTGCCCCCTCC 60.361 66.667 0.00 0.00 0.00 4.30
836 842 3.938637 CTTTCCGTTGCCCCCTCCC 62.939 68.421 0.00 0.00 0.00 4.30
837 843 4.995058 TTCCGTTGCCCCCTCCCT 62.995 66.667 0.00 0.00 0.00 4.20
910 923 0.250338 GGCTAGGGTTTATCCAGCCG 60.250 60.000 6.72 0.00 39.46 5.52
973 999 1.677637 CCGACCAGGGCTTACTCTCC 61.678 65.000 0.00 0.00 35.97 3.71
974 1000 1.677637 CGACCAGGGCTTACTCTCCC 61.678 65.000 0.00 0.00 42.94 4.30
975 1001 1.307084 ACCAGGGCTTACTCTCCCC 60.307 63.158 0.00 0.00 43.67 4.81
981 1007 0.031414 GGCTTACTCTCCCCTACCCA 60.031 60.000 0.00 0.00 0.00 4.51
1184 1211 1.398390 CATCAAAGTCTGCGGTAAGGC 59.602 52.381 0.00 0.00 0.00 4.35
1185 1212 0.669318 TCAAAGTCTGCGGTAAGGCG 60.669 55.000 0.00 0.00 35.06 5.52
1186 1213 2.033194 AAAGTCTGCGGTAAGGCGC 61.033 57.895 0.00 0.00 35.06 6.53
1205 1232 1.619669 CCCCCTTCCTGCCTAACCT 60.620 63.158 0.00 0.00 0.00 3.50
1208 1235 0.698818 CCCTTCCTGCCTAACCTGTT 59.301 55.000 0.00 0.00 0.00 3.16
1212 1239 1.205460 TCCTGCCTAACCTGTTCCCC 61.205 60.000 0.00 0.00 0.00 4.81
1235 1287 0.584054 CGCGTGCGTCAATAGCTTTC 60.584 55.000 6.00 0.00 35.28 2.62
1430 1485 4.084574 AGGAATTCCTGCTACCTTCTGGT 61.085 47.826 26.52 0.00 46.55 4.00
1505 1560 2.364317 TTCTCTCCGGGGAGGCTG 60.364 66.667 31.02 6.75 42.20 4.85
1645 1702 3.738982 TCAAATCGCTTTCTGGTCTTCA 58.261 40.909 0.00 0.00 0.00 3.02
1653 1710 5.995282 TCGCTTTCTGGTCTTCATTTCTTTA 59.005 36.000 0.00 0.00 0.00 1.85
1654 1711 6.655003 TCGCTTTCTGGTCTTCATTTCTTTAT 59.345 34.615 0.00 0.00 0.00 1.40
1655 1712 7.174946 TCGCTTTCTGGTCTTCATTTCTTTATT 59.825 33.333 0.00 0.00 0.00 1.40
1720 1784 6.523201 GCGACATGTTTCTTTTACCAATACAG 59.477 38.462 0.00 0.00 0.00 2.74
1749 1813 9.596677 CTACTATATTAGCACTTAACGACTGTC 57.403 37.037 0.00 0.00 0.00 3.51
1923 2001 7.264373 CAAGTTGACTTGTTTTGAGTCCTAT 57.736 36.000 14.23 0.00 46.11 2.57
1932 2011 8.695456 ACTTGTTTTGAGTCCTATGAATTGTTT 58.305 29.630 0.00 0.00 0.00 2.83
1945 2024 6.683974 ATGAATTGTTTCTACGGATTCTGG 57.316 37.500 0.00 0.00 33.79 3.86
2020 2099 2.097304 TGCACGGAACATACATGAATGC 59.903 45.455 0.00 0.00 0.00 3.56
2037 2116 4.020928 TGAATGCCTCAGAATGCATGTTTT 60.021 37.500 0.00 0.00 46.97 2.43
2049 2128 6.840705 AGAATGCATGTTTTACCCCATAATCT 59.159 34.615 0.00 0.00 0.00 2.40
2057 2136 4.853468 TTACCCCATAATCTCAGTTGCA 57.147 40.909 0.00 0.00 0.00 4.08
2214 2297 4.758165 AGATTGTGTTCGTTTATTTCGGGT 59.242 37.500 0.00 0.00 0.00 5.28
3158 3258 2.947652 CTCACCAGGTATGCCTTCATTG 59.052 50.000 0.00 0.00 44.18 2.82
3159 3259 2.308570 TCACCAGGTATGCCTTCATTGT 59.691 45.455 0.00 0.00 44.18 2.71
3160 3260 3.091545 CACCAGGTATGCCTTCATTGTT 58.908 45.455 0.00 0.00 44.18 2.83
3161 3261 3.129287 CACCAGGTATGCCTTCATTGTTC 59.871 47.826 0.00 0.00 44.18 3.18
3162 3262 3.245229 ACCAGGTATGCCTTCATTGTTCA 60.245 43.478 0.00 0.00 44.18 3.18
3163 3263 3.956199 CCAGGTATGCCTTCATTGTTCAT 59.044 43.478 0.00 0.00 44.18 2.57
3164 3264 4.403432 CCAGGTATGCCTTCATTGTTCATT 59.597 41.667 0.00 0.00 44.18 2.57
3834 4488 7.798596 AATGCTGATATTCTAACCACTTCTG 57.201 36.000 0.00 0.00 0.00 3.02
4443 5099 2.579410 AATGTTTAAGCACGGGAGGT 57.421 45.000 0.00 0.00 0.00 3.85
4685 5350 4.536765 ACATGTGGTTGAGGTTTCTCTTT 58.463 39.130 0.00 0.00 40.58 2.52
4739 5404 7.562454 TTGGGTATTTCGGAGATTCATAAAC 57.438 36.000 0.00 0.00 35.04 2.01
4740 5405 6.059484 TGGGTATTTCGGAGATTCATAAACC 58.941 40.000 0.00 0.00 35.04 3.27
4741 5406 5.472478 GGGTATTTCGGAGATTCATAAACCC 59.528 44.000 0.00 0.00 35.04 4.11
4742 5407 6.296803 GGTATTTCGGAGATTCATAAACCCT 58.703 40.000 0.00 0.00 35.04 4.34
4743 5408 6.771267 GGTATTTCGGAGATTCATAAACCCTT 59.229 38.462 0.00 0.00 35.04 3.95
4744 5409 7.284716 GGTATTTCGGAGATTCATAAACCCTTT 59.715 37.037 0.00 0.00 35.04 3.11
4745 5410 7.718334 ATTTCGGAGATTCATAAACCCTTTT 57.282 32.000 0.00 0.00 35.04 2.27
4746 5411 6.753107 TTCGGAGATTCATAAACCCTTTTC 57.247 37.500 0.00 0.00 35.04 2.29
4887 5560 4.022849 GTCTTCAGCTGCAACCACTAATTT 60.023 41.667 9.47 0.00 0.00 1.82
5037 5727 4.757657 TGCTTGCAAAATTTGAGCATGAAT 59.242 33.333 23.99 0.00 36.11 2.57
5109 5799 8.637281 AAAAATGTTTTCAAAACTACTACCCG 57.363 30.769 14.10 0.00 0.00 5.28
5110 5800 6.947644 AATGTTTTCAAAACTACTACCCGT 57.052 33.333 14.10 0.00 0.00 5.28
5112 5802 6.362210 TGTTTTCAAAACTACTACCCGTTC 57.638 37.500 14.10 0.00 0.00 3.95
5119 5809 2.092323 ACTACTACCCGTTCCCGTAAC 58.908 52.381 0.00 0.00 34.52 2.50
5181 5871 5.213868 TGTTTTACATTATGGGATGGGGT 57.786 39.130 0.00 0.00 0.00 4.95
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.796483 TTCCATCACGCCGGTCAAGG 62.796 60.000 1.90 0.00 0.00 3.61
21 22 1.361668 CTTCCATCACGCCGGTCAAG 61.362 60.000 1.90 0.00 0.00 3.02
22 23 1.375396 CTTCCATCACGCCGGTCAA 60.375 57.895 1.90 0.00 0.00 3.18
23 24 2.264480 CTTCCATCACGCCGGTCA 59.736 61.111 1.90 0.00 0.00 4.02
24 25 3.195698 GCTTCCATCACGCCGGTC 61.196 66.667 1.90 0.00 0.00 4.79
27 28 3.554692 GACGCTTCCATCACGCCG 61.555 66.667 0.00 0.00 0.00 6.46
28 29 3.195698 GGACGCTTCCATCACGCC 61.196 66.667 3.96 0.00 42.30 5.68
29 30 1.298859 AAAGGACGCTTCCATCACGC 61.299 55.000 12.41 0.00 45.72 5.34
30 31 0.443869 CAAAGGACGCTTCCATCACG 59.556 55.000 12.41 0.00 45.72 4.35
31 32 0.804989 CCAAAGGACGCTTCCATCAC 59.195 55.000 12.41 0.00 45.72 3.06
32 33 0.322456 CCCAAAGGACGCTTCCATCA 60.322 55.000 12.41 0.00 45.72 3.07
33 34 0.035439 TCCCAAAGGACGCTTCCATC 60.035 55.000 12.41 0.00 45.72 3.51
34 35 0.035056 CTCCCAAAGGACGCTTCCAT 60.035 55.000 12.41 0.00 45.72 3.41
35 36 1.374947 CTCCCAAAGGACGCTTCCA 59.625 57.895 12.41 0.00 45.72 3.53
36 37 4.303257 CTCCCAAAGGACGCTTCC 57.697 61.111 0.00 0.00 43.22 3.46
44 45 3.789346 TCGATTCTCGACCTCCCAAAGG 61.789 54.545 0.00 0.00 44.82 3.11
45 46 1.476891 TCGATTCTCGACCTCCCAAAG 59.523 52.381 0.00 0.00 44.82 2.77
46 47 1.552578 TCGATTCTCGACCTCCCAAA 58.447 50.000 0.00 0.00 44.82 3.28
47 48 3.276281 TCGATTCTCGACCTCCCAA 57.724 52.632 0.00 0.00 44.82 4.12
56 57 1.372251 CCGCCTCCATCGATTCTCG 60.372 63.158 0.00 0.00 42.10 4.04
57 58 0.598680 CACCGCCTCCATCGATTCTC 60.599 60.000 0.00 0.00 0.00 2.87
58 59 1.443407 CACCGCCTCCATCGATTCT 59.557 57.895 0.00 0.00 0.00 2.40
59 60 1.595382 CCACCGCCTCCATCGATTC 60.595 63.158 0.00 0.00 0.00 2.52
60 61 2.505982 CCACCGCCTCCATCGATT 59.494 61.111 0.00 0.00 0.00 3.34
61 62 4.241555 GCCACCGCCTCCATCGAT 62.242 66.667 0.00 0.00 0.00 3.59
70 71 3.701604 CTAGACAGTCGCCACCGCC 62.702 68.421 0.00 0.00 0.00 6.13
71 72 2.202623 CTAGACAGTCGCCACCGC 60.203 66.667 0.00 0.00 0.00 5.68
72 73 1.384989 ATCCTAGACAGTCGCCACCG 61.385 60.000 0.00 0.00 0.00 4.94
73 74 0.103208 CATCCTAGACAGTCGCCACC 59.897 60.000 0.00 0.00 0.00 4.61
74 75 1.066303 CTCATCCTAGACAGTCGCCAC 59.934 57.143 0.00 0.00 0.00 5.01
75 76 1.393603 CTCATCCTAGACAGTCGCCA 58.606 55.000 0.00 0.00 0.00 5.69
76 77 0.031449 GCTCATCCTAGACAGTCGCC 59.969 60.000 0.00 0.00 0.00 5.54
77 78 0.317436 CGCTCATCCTAGACAGTCGC 60.317 60.000 0.00 0.00 0.00 5.19
78 79 0.309302 CCGCTCATCCTAGACAGTCG 59.691 60.000 0.00 0.00 0.00 4.18
79 80 0.031449 GCCGCTCATCCTAGACAGTC 59.969 60.000 0.00 0.00 0.00 3.51
80 81 1.729470 CGCCGCTCATCCTAGACAGT 61.729 60.000 0.00 0.00 0.00 3.55
81 82 1.007964 CGCCGCTCATCCTAGACAG 60.008 63.158 0.00 0.00 0.00 3.51
82 83 3.120105 CGCCGCTCATCCTAGACA 58.880 61.111 0.00 0.00 0.00 3.41
83 84 2.355244 GCGCCGCTCATCCTAGAC 60.355 66.667 0.00 0.00 0.00 2.59
84 85 3.966104 CGCGCCGCTCATCCTAGA 61.966 66.667 7.78 0.00 0.00 2.43
102 103 2.829003 TAGCCCTCTCTCCGCACG 60.829 66.667 0.00 0.00 0.00 5.34
103 104 2.809010 GTAGCCCTCTCTCCGCAC 59.191 66.667 0.00 0.00 0.00 5.34
104 105 2.829003 CGTAGCCCTCTCTCCGCA 60.829 66.667 0.00 0.00 0.00 5.69
105 106 3.597728 CCGTAGCCCTCTCTCCGC 61.598 72.222 0.00 0.00 0.00 5.54
106 107 3.597728 GCCGTAGCCCTCTCTCCG 61.598 72.222 0.00 0.00 0.00 4.63
107 108 3.597728 CGCCGTAGCCCTCTCTCC 61.598 72.222 0.00 0.00 34.57 3.71
108 109 2.829458 ACGCCGTAGCCCTCTCTC 60.829 66.667 0.00 0.00 34.57 3.20
109 110 3.141488 CACGCCGTAGCCCTCTCT 61.141 66.667 0.00 0.00 34.57 3.10
110 111 4.208686 CCACGCCGTAGCCCTCTC 62.209 72.222 0.00 0.00 34.57 3.20
117 118 2.083835 CTATCCCACCCACGCCGTAG 62.084 65.000 0.00 0.00 0.00 3.51
118 119 2.043147 TATCCCACCCACGCCGTA 60.043 61.111 0.00 0.00 0.00 4.02
119 120 3.467226 CTATCCCACCCACGCCGT 61.467 66.667 0.00 0.00 0.00 5.68
120 121 4.235762 CCTATCCCACCCACGCCG 62.236 72.222 0.00 0.00 0.00 6.46
121 122 4.564110 GCCTATCCCACCCACGCC 62.564 72.222 0.00 0.00 0.00 5.68
122 123 3.757248 CTGCCTATCCCACCCACGC 62.757 68.421 0.00 0.00 0.00 5.34
123 124 1.622607 TTCTGCCTATCCCACCCACG 61.623 60.000 0.00 0.00 0.00 4.94
124 125 0.623723 TTTCTGCCTATCCCACCCAC 59.376 55.000 0.00 0.00 0.00 4.61
125 126 1.284785 CTTTTCTGCCTATCCCACCCA 59.715 52.381 0.00 0.00 0.00 4.51
126 127 1.410224 CCTTTTCTGCCTATCCCACCC 60.410 57.143 0.00 0.00 0.00 4.61
127 128 1.564348 TCCTTTTCTGCCTATCCCACC 59.436 52.381 0.00 0.00 0.00 4.61
128 129 2.422093 CCTCCTTTTCTGCCTATCCCAC 60.422 54.545 0.00 0.00 0.00 4.61
129 130 1.846439 CCTCCTTTTCTGCCTATCCCA 59.154 52.381 0.00 0.00 0.00 4.37
130 131 1.847088 ACCTCCTTTTCTGCCTATCCC 59.153 52.381 0.00 0.00 0.00 3.85
131 132 2.422093 CCACCTCCTTTTCTGCCTATCC 60.422 54.545 0.00 0.00 0.00 2.59
132 133 2.422093 CCCACCTCCTTTTCTGCCTATC 60.422 54.545 0.00 0.00 0.00 2.08
133 134 1.566231 CCCACCTCCTTTTCTGCCTAT 59.434 52.381 0.00 0.00 0.00 2.57
134 135 0.991920 CCCACCTCCTTTTCTGCCTA 59.008 55.000 0.00 0.00 0.00 3.93
135 136 1.068352 ACCCACCTCCTTTTCTGCCT 61.068 55.000 0.00 0.00 0.00 4.75
136 137 0.178961 AACCCACCTCCTTTTCTGCC 60.179 55.000 0.00 0.00 0.00 4.85
137 138 1.248486 GAACCCACCTCCTTTTCTGC 58.752 55.000 0.00 0.00 0.00 4.26
138 139 2.158608 ACTGAACCCACCTCCTTTTCTG 60.159 50.000 0.00 0.00 0.00 3.02
139 140 2.136026 ACTGAACCCACCTCCTTTTCT 58.864 47.619 0.00 0.00 0.00 2.52
140 141 2.623416 CAACTGAACCCACCTCCTTTTC 59.377 50.000 0.00 0.00 0.00 2.29
141 142 2.666317 CAACTGAACCCACCTCCTTTT 58.334 47.619 0.00 0.00 0.00 2.27
142 143 1.133482 CCAACTGAACCCACCTCCTTT 60.133 52.381 0.00 0.00 0.00 3.11
143 144 0.478507 CCAACTGAACCCACCTCCTT 59.521 55.000 0.00 0.00 0.00 3.36
144 145 0.401395 TCCAACTGAACCCACCTCCT 60.401 55.000 0.00 0.00 0.00 3.69
145 146 0.476771 TTCCAACTGAACCCACCTCC 59.523 55.000 0.00 0.00 0.00 4.30
146 147 2.358322 TTTCCAACTGAACCCACCTC 57.642 50.000 0.00 0.00 31.05 3.85
147 148 2.838637 TTTTCCAACTGAACCCACCT 57.161 45.000 0.00 0.00 31.05 4.00
174 175 3.399330 TCGTGATTGAAGGACAAGTTCC 58.601 45.455 0.00 0.00 46.33 3.62
175 176 5.023551 CTTCGTGATTGAAGGACAAGTTC 57.976 43.478 0.00 0.00 41.32 3.01
184 185 2.080286 ACGTCCCTTCGTGATTGAAG 57.920 50.000 0.00 0.00 43.98 3.02
192 193 2.355481 GAACGCACGTCCCTTCGT 60.355 61.111 0.00 0.00 45.10 3.85
193 194 3.467119 CGAACGCACGTCCCTTCG 61.467 66.667 0.00 0.00 0.00 3.79
194 195 2.355481 ACGAACGCACGTCCCTTC 60.355 61.111 0.00 0.00 43.02 3.46
195 196 2.660552 CACGAACGCACGTCCCTT 60.661 61.111 4.58 0.00 44.76 3.95
196 197 4.657824 CCACGAACGCACGTCCCT 62.658 66.667 4.58 0.00 44.76 4.20
198 199 4.955774 ACCCACGAACGCACGTCC 62.956 66.667 4.58 0.00 44.76 4.79
199 200 2.963320 AACCCACGAACGCACGTC 60.963 61.111 4.58 0.00 44.76 4.34
201 202 3.266376 ACAACCCACGAACGCACG 61.266 61.111 0.00 0.48 39.31 5.34
202 203 1.984321 AACACAACCCACGAACGCAC 61.984 55.000 0.00 0.00 0.00 5.34
203 204 1.306642 AAACACAACCCACGAACGCA 61.307 50.000 0.00 0.00 0.00 5.24
204 205 0.656785 TAAACACAACCCACGAACGC 59.343 50.000 0.00 0.00 0.00 4.84
205 206 3.612472 AATAAACACAACCCACGAACG 57.388 42.857 0.00 0.00 0.00 3.95
225 226 8.773404 TCGAGGAAACAAACCAAAAATAAAAA 57.227 26.923 0.00 0.00 0.00 1.94
226 227 7.010645 GCTCGAGGAAACAAACCAAAAATAAAA 59.989 33.333 15.58 0.00 0.00 1.52
227 228 6.477360 GCTCGAGGAAACAAACCAAAAATAAA 59.523 34.615 15.58 0.00 0.00 1.40
228 229 5.980715 GCTCGAGGAAACAAACCAAAAATAA 59.019 36.000 15.58 0.00 0.00 1.40
229 230 5.525199 GCTCGAGGAAACAAACCAAAAATA 58.475 37.500 15.58 0.00 0.00 1.40
230 231 4.368315 GCTCGAGGAAACAAACCAAAAAT 58.632 39.130 15.58 0.00 0.00 1.82
231 232 3.732471 CGCTCGAGGAAACAAACCAAAAA 60.732 43.478 15.58 0.00 0.00 1.94
232 233 2.223386 CGCTCGAGGAAACAAACCAAAA 60.223 45.455 15.58 0.00 0.00 2.44
233 234 1.332375 CGCTCGAGGAAACAAACCAAA 59.668 47.619 15.58 0.00 0.00 3.28
234 235 0.941542 CGCTCGAGGAAACAAACCAA 59.058 50.000 15.58 0.00 0.00 3.67
235 236 0.105224 TCGCTCGAGGAAACAAACCA 59.895 50.000 15.58 0.00 0.00 3.67
236 237 0.790814 CTCGCTCGAGGAAACAAACC 59.209 55.000 15.58 0.00 38.51 3.27
246 247 2.223688 ACAATTCTCATCCTCGCTCGAG 60.224 50.000 8.45 8.45 41.63 4.04
247 248 1.751351 ACAATTCTCATCCTCGCTCGA 59.249 47.619 0.00 0.00 0.00 4.04
248 249 2.123342 GACAATTCTCATCCTCGCTCG 58.877 52.381 0.00 0.00 0.00 5.03
249 250 2.123342 CGACAATTCTCATCCTCGCTC 58.877 52.381 0.00 0.00 0.00 5.03
250 251 1.202463 CCGACAATTCTCATCCTCGCT 60.202 52.381 0.00 0.00 0.00 4.93
251 252 1.212616 CCGACAATTCTCATCCTCGC 58.787 55.000 0.00 0.00 0.00 5.03
252 253 2.586258 ACCGACAATTCTCATCCTCG 57.414 50.000 0.00 0.00 0.00 4.63
253 254 4.386867 TGTACCGACAATTCTCATCCTC 57.613 45.455 0.00 0.00 30.68 3.71
254 255 4.819105 TTGTACCGACAATTCTCATCCT 57.181 40.909 0.00 0.00 40.72 3.24
255 256 4.332819 CCTTTGTACCGACAATTCTCATCC 59.667 45.833 0.00 0.00 44.96 3.51
256 257 5.175859 TCCTTTGTACCGACAATTCTCATC 58.824 41.667 0.00 0.00 44.96 2.92
257 258 5.160607 TCCTTTGTACCGACAATTCTCAT 57.839 39.130 0.00 0.00 44.96 2.90
258 259 4.610605 TCCTTTGTACCGACAATTCTCA 57.389 40.909 0.00 0.00 44.96 3.27
259 260 4.201822 GCATCCTTTGTACCGACAATTCTC 60.202 45.833 0.00 0.00 44.96 2.87
260 261 3.689649 GCATCCTTTGTACCGACAATTCT 59.310 43.478 0.00 0.00 44.96 2.40
261 262 3.485216 CGCATCCTTTGTACCGACAATTC 60.485 47.826 0.00 0.00 44.96 2.17
262 263 2.418628 CGCATCCTTTGTACCGACAATT 59.581 45.455 0.00 0.00 44.96 2.32
263 264 2.006888 CGCATCCTTTGTACCGACAAT 58.993 47.619 0.00 0.00 44.96 2.71
264 265 1.434555 CGCATCCTTTGTACCGACAA 58.565 50.000 0.00 0.00 43.94 3.18
265 266 0.390603 CCGCATCCTTTGTACCGACA 60.391 55.000 0.00 0.00 0.00 4.35
266 267 1.087771 CCCGCATCCTTTGTACCGAC 61.088 60.000 0.00 0.00 0.00 4.79
267 268 1.219664 CCCGCATCCTTTGTACCGA 59.780 57.895 0.00 0.00 0.00 4.69
268 269 0.810031 CTCCCGCATCCTTTGTACCG 60.810 60.000 0.00 0.00 0.00 4.02
269 270 0.463833 CCTCCCGCATCCTTTGTACC 60.464 60.000 0.00 0.00 0.00 3.34
270 271 0.252197 ACCTCCCGCATCCTTTGTAC 59.748 55.000 0.00 0.00 0.00 2.90
271 272 0.251916 CACCTCCCGCATCCTTTGTA 59.748 55.000 0.00 0.00 0.00 2.41
272 273 1.002134 CACCTCCCGCATCCTTTGT 60.002 57.895 0.00 0.00 0.00 2.83
273 274 1.750399 CCACCTCCCGCATCCTTTG 60.750 63.158 0.00 0.00 0.00 2.77
274 275 2.677228 CCACCTCCCGCATCCTTT 59.323 61.111 0.00 0.00 0.00 3.11
275 276 3.411517 CCCACCTCCCGCATCCTT 61.412 66.667 0.00 0.00 0.00 3.36
276 277 3.721172 ATCCCACCTCCCGCATCCT 62.721 63.158 0.00 0.00 0.00 3.24
277 278 3.171388 ATCCCACCTCCCGCATCC 61.171 66.667 0.00 0.00 0.00 3.51
278 279 2.427753 GATCCCACCTCCCGCATC 59.572 66.667 0.00 0.00 0.00 3.91
279 280 3.550431 CGATCCCACCTCCCGCAT 61.550 66.667 0.00 0.00 0.00 4.73
280 281 4.770362 TCGATCCCACCTCCCGCA 62.770 66.667 0.00 0.00 0.00 5.69
281 282 3.447025 CTTCGATCCCACCTCCCGC 62.447 68.421 0.00 0.00 0.00 6.13
282 283 2.797278 CCTTCGATCCCACCTCCCG 61.797 68.421 0.00 0.00 0.00 5.14
283 284 1.382695 TCCTTCGATCCCACCTCCC 60.383 63.158 0.00 0.00 0.00 4.30
284 285 1.403687 CCTCCTTCGATCCCACCTCC 61.404 65.000 0.00 0.00 0.00 4.30
285 286 0.688087 ACCTCCTTCGATCCCACCTC 60.688 60.000 0.00 0.00 0.00 3.85
286 287 0.688087 GACCTCCTTCGATCCCACCT 60.688 60.000 0.00 0.00 0.00 4.00
287 288 1.823976 GACCTCCTTCGATCCCACC 59.176 63.158 0.00 0.00 0.00 4.61
288 289 1.035932 TCGACCTCCTTCGATCCCAC 61.036 60.000 0.00 0.00 43.01 4.61
289 290 0.323999 TTCGACCTCCTTCGATCCCA 60.324 55.000 0.00 0.00 46.94 4.37
290 291 0.102663 GTTCGACCTCCTTCGATCCC 59.897 60.000 0.00 0.00 46.94 3.85
291 292 0.102663 GGTTCGACCTCCTTCGATCC 59.897 60.000 6.82 6.82 46.94 3.36
292 293 0.248539 CGGTTCGACCTCCTTCGATC 60.249 60.000 0.00 0.00 46.94 3.69
293 294 0.679002 TCGGTTCGACCTCCTTCGAT 60.679 55.000 0.00 0.00 46.94 3.59
294 295 0.890542 TTCGGTTCGACCTCCTTCGA 60.891 55.000 0.00 0.00 46.12 3.71
295 296 0.731855 GTTCGGTTCGACCTCCTTCG 60.732 60.000 0.00 0.00 40.53 3.79
296 297 0.389556 GGTTCGGTTCGACCTCCTTC 60.390 60.000 0.00 0.00 35.66 3.46
297 298 1.117142 TGGTTCGGTTCGACCTCCTT 61.117 55.000 0.00 0.00 35.66 3.36
298 299 0.903454 ATGGTTCGGTTCGACCTCCT 60.903 55.000 0.00 0.00 35.66 3.69
299 300 0.459759 GATGGTTCGGTTCGACCTCC 60.460 60.000 0.00 0.00 35.66 4.30
300 301 0.245539 TGATGGTTCGGTTCGACCTC 59.754 55.000 0.00 6.23 35.66 3.85
301 302 0.902531 ATGATGGTTCGGTTCGACCT 59.097 50.000 0.00 0.00 35.66 3.85
302 303 1.006832 CATGATGGTTCGGTTCGACC 58.993 55.000 0.00 0.00 34.89 4.79
303 304 1.659098 GTCATGATGGTTCGGTTCGAC 59.341 52.381 0.00 0.00 34.89 4.20
304 305 1.734377 CGTCATGATGGTTCGGTTCGA 60.734 52.381 7.06 0.00 0.00 3.71
305 306 0.645355 CGTCATGATGGTTCGGTTCG 59.355 55.000 7.06 0.00 0.00 3.95
306 307 1.722011 ACGTCATGATGGTTCGGTTC 58.278 50.000 18.97 0.00 0.00 3.62
307 308 2.073816 GAACGTCATGATGGTTCGGTT 58.926 47.619 18.97 3.07 31.82 4.44
308 309 1.722011 GAACGTCATGATGGTTCGGT 58.278 50.000 18.97 6.39 31.82 4.69
311 312 2.540101 GGATCGAACGTCATGATGGTTC 59.460 50.000 22.78 22.78 37.33 3.62
312 313 2.168521 AGGATCGAACGTCATGATGGTT 59.831 45.455 18.97 15.80 0.00 3.67
313 314 1.757118 AGGATCGAACGTCATGATGGT 59.243 47.619 18.97 12.97 0.00 3.55
314 315 2.515926 AGGATCGAACGTCATGATGG 57.484 50.000 18.97 7.47 0.00 3.51
315 316 3.711086 AGAAGGATCGAACGTCATGATG 58.289 45.455 13.53 13.53 0.00 3.07
316 317 4.392921 AAGAAGGATCGAACGTCATGAT 57.607 40.909 0.00 0.00 0.00 2.45
317 318 3.868757 AAGAAGGATCGAACGTCATGA 57.131 42.857 0.00 0.00 0.00 3.07
318 319 6.589830 ATTAAAGAAGGATCGAACGTCATG 57.410 37.500 8.58 0.00 0.00 3.07
319 320 7.490000 AGTATTAAAGAAGGATCGAACGTCAT 58.510 34.615 8.58 0.00 0.00 3.06
320 321 6.860080 AGTATTAAAGAAGGATCGAACGTCA 58.140 36.000 8.58 0.00 0.00 4.35
321 322 6.417339 GGAGTATTAAAGAAGGATCGAACGTC 59.583 42.308 0.00 0.00 0.00 4.34
322 323 6.271566 GGAGTATTAAAGAAGGATCGAACGT 58.728 40.000 0.00 0.00 0.00 3.99
323 324 5.690857 GGGAGTATTAAAGAAGGATCGAACG 59.309 44.000 0.00 0.00 0.00 3.95
324 325 6.818233 AGGGAGTATTAAAGAAGGATCGAAC 58.182 40.000 0.00 0.00 0.00 3.95
325 326 6.041751 GGAGGGAGTATTAAAGAAGGATCGAA 59.958 42.308 0.00 0.00 0.00 3.71
326 327 5.539193 GGAGGGAGTATTAAAGAAGGATCGA 59.461 44.000 0.00 0.00 0.00 3.59
327 328 5.565045 CGGAGGGAGTATTAAAGAAGGATCG 60.565 48.000 0.00 0.00 0.00 3.69
328 329 5.304871 ACGGAGGGAGTATTAAAGAAGGATC 59.695 44.000 0.00 0.00 0.00 3.36
329 330 5.217400 ACGGAGGGAGTATTAAAGAAGGAT 58.783 41.667 0.00 0.00 0.00 3.24
330 331 4.617593 ACGGAGGGAGTATTAAAGAAGGA 58.382 43.478 0.00 0.00 0.00 3.36
331 332 5.354842 AACGGAGGGAGTATTAAAGAAGG 57.645 43.478 0.00 0.00 0.00 3.46
332 333 5.105064 TGGAACGGAGGGAGTATTAAAGAAG 60.105 44.000 0.00 0.00 0.00 2.85
333 334 4.778958 TGGAACGGAGGGAGTATTAAAGAA 59.221 41.667 0.00 0.00 0.00 2.52
334 335 4.355549 TGGAACGGAGGGAGTATTAAAGA 58.644 43.478 0.00 0.00 0.00 2.52
335 336 4.748277 TGGAACGGAGGGAGTATTAAAG 57.252 45.455 0.00 0.00 0.00 1.85
336 337 6.811634 TTATGGAACGGAGGGAGTATTAAA 57.188 37.500 0.00 0.00 0.00 1.52
337 338 6.328148 ACATTATGGAACGGAGGGAGTATTAA 59.672 38.462 0.00 0.00 0.00 1.40
338 339 5.842328 ACATTATGGAACGGAGGGAGTATTA 59.158 40.000 0.00 0.00 0.00 0.98
339 340 4.658901 ACATTATGGAACGGAGGGAGTATT 59.341 41.667 0.00 0.00 0.00 1.89
340 341 4.232091 ACATTATGGAACGGAGGGAGTAT 58.768 43.478 0.00 0.00 0.00 2.12
341 342 3.649843 ACATTATGGAACGGAGGGAGTA 58.350 45.455 0.00 0.00 0.00 2.59
342 343 2.478292 ACATTATGGAACGGAGGGAGT 58.522 47.619 0.00 0.00 0.00 3.85
343 344 3.641906 ACTACATTATGGAACGGAGGGAG 59.358 47.826 0.00 0.00 0.00 4.30
344 345 3.386726 CACTACATTATGGAACGGAGGGA 59.613 47.826 0.00 0.00 0.00 4.20
345 346 3.728845 CACTACATTATGGAACGGAGGG 58.271 50.000 0.00 0.00 0.00 4.30
346 347 3.131396 GCACTACATTATGGAACGGAGG 58.869 50.000 0.00 0.00 0.00 4.30
347 348 3.131396 GGCACTACATTATGGAACGGAG 58.869 50.000 0.00 0.00 0.00 4.63
348 349 2.769663 AGGCACTACATTATGGAACGGA 59.230 45.455 0.00 0.00 36.02 4.69
349 350 3.194005 AGGCACTACATTATGGAACGG 57.806 47.619 0.00 0.00 36.02 4.44
363 364 7.124901 TGACTTCTCAGAAAATCTATAGGCACT 59.875 37.037 0.00 0.00 46.37 4.40
364 365 7.268586 TGACTTCTCAGAAAATCTATAGGCAC 58.731 38.462 0.00 0.00 0.00 5.01
365 366 7.423844 TGACTTCTCAGAAAATCTATAGGCA 57.576 36.000 0.00 0.00 0.00 4.75
366 367 8.608317 GTTTGACTTCTCAGAAAATCTATAGGC 58.392 37.037 0.00 0.00 0.00 3.93
367 368 9.883142 AGTTTGACTTCTCAGAAAATCTATAGG 57.117 33.333 0.00 0.00 0.00 2.57
371 372 8.345565 GCAAAGTTTGACTTCTCAGAAAATCTA 58.654 33.333 19.82 0.00 37.47 1.98
372 373 7.148018 TGCAAAGTTTGACTTCTCAGAAAATCT 60.148 33.333 19.82 0.00 37.47 2.40
373 374 6.974622 TGCAAAGTTTGACTTCTCAGAAAATC 59.025 34.615 19.82 0.00 37.47 2.17
374 375 6.866480 TGCAAAGTTTGACTTCTCAGAAAAT 58.134 32.000 19.82 0.00 37.47 1.82
375 376 6.266168 TGCAAAGTTTGACTTCTCAGAAAA 57.734 33.333 19.82 0.00 37.47 2.29
376 377 5.895636 TGCAAAGTTTGACTTCTCAGAAA 57.104 34.783 19.82 0.00 37.47 2.52
377 378 5.895636 TTGCAAAGTTTGACTTCTCAGAA 57.104 34.783 19.82 0.00 37.47 3.02
378 379 5.415701 AGTTTGCAAAGTTTGACTTCTCAGA 59.584 36.000 19.82 0.00 37.47 3.27
379 380 5.644644 AGTTTGCAAAGTTTGACTTCTCAG 58.355 37.500 19.82 0.00 37.47 3.35
380 381 5.643379 AGTTTGCAAAGTTTGACTTCTCA 57.357 34.783 19.82 3.64 37.47 3.27
381 382 6.951256 AAAGTTTGCAAAGTTTGACTTCTC 57.049 33.333 33.55 11.11 37.47 2.87
509 510 9.757227 CCAAGTTTGTGGAGAAAAATATTTACA 57.243 29.630 0.01 0.00 41.65 2.41
510 511 9.758651 ACCAAGTTTGTGGAGAAAAATATTTAC 57.241 29.630 0.01 0.00 41.65 2.01
511 512 9.974980 GACCAAGTTTGTGGAGAAAAATATTTA 57.025 29.630 0.01 0.00 41.65 1.40
512 513 8.482128 TGACCAAGTTTGTGGAGAAAAATATTT 58.518 29.630 0.00 0.00 41.65 1.40
513 514 8.017418 TGACCAAGTTTGTGGAGAAAAATATT 57.983 30.769 0.00 0.00 41.65 1.28
514 515 7.595819 TGACCAAGTTTGTGGAGAAAAATAT 57.404 32.000 0.00 0.00 41.65 1.28
515 516 7.411486 TTGACCAAGTTTGTGGAGAAAAATA 57.589 32.000 0.00 0.00 41.65 1.40
516 517 5.930837 TGACCAAGTTTGTGGAGAAAAAT 57.069 34.783 0.00 0.00 41.65 1.82
517 518 5.730296 TTGACCAAGTTTGTGGAGAAAAA 57.270 34.783 0.00 0.00 41.65 1.94
518 519 5.245075 ACTTTGACCAAGTTTGTGGAGAAAA 59.755 36.000 0.00 0.00 43.89 2.29
519 520 4.770010 ACTTTGACCAAGTTTGTGGAGAAA 59.230 37.500 0.00 0.00 43.89 2.52
520 521 4.340617 ACTTTGACCAAGTTTGTGGAGAA 58.659 39.130 0.00 0.00 43.89 2.87
521 522 3.963129 ACTTTGACCAAGTTTGTGGAGA 58.037 40.909 0.00 0.00 43.89 3.71
531 532 6.918022 GTCAAACCTCATAAACTTTGACCAAG 59.082 38.462 9.86 0.00 43.35 3.61
532 533 6.801575 GTCAAACCTCATAAACTTTGACCAA 58.198 36.000 9.86 0.00 43.35 3.67
533 534 6.385649 GTCAAACCTCATAAACTTTGACCA 57.614 37.500 9.86 0.00 43.35 4.02
535 536 8.926715 AAAAGTCAAACCTCATAAACTTTGAC 57.073 30.769 12.19 12.19 46.84 3.18
536 537 8.744652 TGAAAAGTCAAACCTCATAAACTTTGA 58.255 29.630 0.00 0.00 37.12 2.69
537 538 8.925161 TGAAAAGTCAAACCTCATAAACTTTG 57.075 30.769 0.00 0.00 37.12 2.77
538 539 9.936759 TTTGAAAAGTCAAACCTCATAAACTTT 57.063 25.926 0.00 0.00 46.48 2.66
564 565 9.875708 TCCCATAATGTAGTGCCTATAAATTTT 57.124 29.630 0.00 0.00 0.00 1.82
565 566 9.297037 GTCCCATAATGTAGTGCCTATAAATTT 57.703 33.333 0.00 0.00 0.00 1.82
566 567 7.606456 CGTCCCATAATGTAGTGCCTATAAATT 59.394 37.037 0.00 0.00 0.00 1.82
567 568 7.103641 CGTCCCATAATGTAGTGCCTATAAAT 58.896 38.462 0.00 0.00 0.00 1.40
568 569 6.460781 CGTCCCATAATGTAGTGCCTATAAA 58.539 40.000 0.00 0.00 0.00 1.40
569 570 5.046878 CCGTCCCATAATGTAGTGCCTATAA 60.047 44.000 0.00 0.00 0.00 0.98
570 571 4.464951 CCGTCCCATAATGTAGTGCCTATA 59.535 45.833 0.00 0.00 0.00 1.31
571 572 3.260884 CCGTCCCATAATGTAGTGCCTAT 59.739 47.826 0.00 0.00 0.00 2.57
572 573 2.631062 CCGTCCCATAATGTAGTGCCTA 59.369 50.000 0.00 0.00 0.00 3.93
573 574 1.416401 CCGTCCCATAATGTAGTGCCT 59.584 52.381 0.00 0.00 0.00 4.75
574 575 1.414919 TCCGTCCCATAATGTAGTGCC 59.585 52.381 0.00 0.00 0.00 5.01
575 576 2.548067 CCTCCGTCCCATAATGTAGTGC 60.548 54.545 0.00 0.00 0.00 4.40
576 577 2.037251 CCCTCCGTCCCATAATGTAGTG 59.963 54.545 0.00 0.00 0.00 2.74
577 578 2.090943 TCCCTCCGTCCCATAATGTAGT 60.091 50.000 0.00 0.00 0.00 2.73
578 579 2.563179 CTCCCTCCGTCCCATAATGTAG 59.437 54.545 0.00 0.00 0.00 2.74
579 580 2.090943 ACTCCCTCCGTCCCATAATGTA 60.091 50.000 0.00 0.00 0.00 2.29
580 581 1.344087 ACTCCCTCCGTCCCATAATGT 60.344 52.381 0.00 0.00 0.00 2.71
581 582 1.424638 ACTCCCTCCGTCCCATAATG 58.575 55.000 0.00 0.00 0.00 1.90
582 583 2.179424 ACTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
583 584 1.572415 ACTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
584 585 1.229131 ACTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
585 586 1.145325 CTACTACTCCCTCCGTCCCAT 59.855 57.143 0.00 0.00 0.00 4.00
586 587 0.549950 CTACTACTCCCTCCGTCCCA 59.450 60.000 0.00 0.00 0.00 4.37
587 588 0.842635 TCTACTACTCCCTCCGTCCC 59.157 60.000 0.00 0.00 0.00 4.46
588 589 2.781923 GATCTACTACTCCCTCCGTCC 58.218 57.143 0.00 0.00 0.00 4.79
589 590 2.036992 TCGATCTACTACTCCCTCCGTC 59.963 54.545 0.00 0.00 0.00 4.79
590 591 2.045524 TCGATCTACTACTCCCTCCGT 58.954 52.381 0.00 0.00 0.00 4.69
591 592 2.835580 TCGATCTACTACTCCCTCCG 57.164 55.000 0.00 0.00 0.00 4.63
592 593 3.414269 CCTTCGATCTACTACTCCCTCC 58.586 54.545 0.00 0.00 0.00 4.30
593 594 3.072768 TCCCTTCGATCTACTACTCCCTC 59.927 52.174 0.00 0.00 0.00 4.30
594 595 3.054576 TCCCTTCGATCTACTACTCCCT 58.945 50.000 0.00 0.00 0.00 4.20
595 596 3.148412 GTCCCTTCGATCTACTACTCCC 58.852 54.545 0.00 0.00 0.00 4.30
596 597 3.818180 TGTCCCTTCGATCTACTACTCC 58.182 50.000 0.00 0.00 0.00 3.85
597 598 6.039493 TGAAATGTCCCTTCGATCTACTACTC 59.961 42.308 0.00 0.00 0.00 2.59
598 599 5.892119 TGAAATGTCCCTTCGATCTACTACT 59.108 40.000 0.00 0.00 0.00 2.57
599 600 6.145338 TGAAATGTCCCTTCGATCTACTAC 57.855 41.667 0.00 0.00 0.00 2.73
600 601 6.785337 TTGAAATGTCCCTTCGATCTACTA 57.215 37.500 0.00 0.00 0.00 1.82
601 602 5.677319 TTGAAATGTCCCTTCGATCTACT 57.323 39.130 0.00 0.00 0.00 2.57
602 603 6.737254 TTTTGAAATGTCCCTTCGATCTAC 57.263 37.500 0.00 0.00 0.00 2.59
603 604 7.938140 AATTTTGAAATGTCCCTTCGATCTA 57.062 32.000 0.00 0.00 0.00 1.98
604 605 6.840780 AATTTTGAAATGTCCCTTCGATCT 57.159 33.333 0.00 0.00 0.00 2.75
605 606 6.868339 ACAAATTTTGAAATGTCCCTTCGATC 59.132 34.615 15.81 0.00 0.00 3.69
606 607 6.758254 ACAAATTTTGAAATGTCCCTTCGAT 58.242 32.000 15.81 0.00 0.00 3.59
607 608 6.155475 ACAAATTTTGAAATGTCCCTTCGA 57.845 33.333 15.81 0.00 0.00 3.71
608 609 6.843069 AACAAATTTTGAAATGTCCCTTCG 57.157 33.333 15.81 0.00 0.00 3.79
609 610 8.887036 AGTAACAAATTTTGAAATGTCCCTTC 57.113 30.769 15.81 0.00 0.00 3.46
610 611 7.931407 GGAGTAACAAATTTTGAAATGTCCCTT 59.069 33.333 15.81 0.00 0.00 3.95
611 612 7.290014 AGGAGTAACAAATTTTGAAATGTCCCT 59.710 33.333 15.81 9.37 0.00 4.20
617 618 9.301897 AGAGCTAGGAGTAACAAATTTTGAAAT 57.698 29.630 15.81 2.95 0.00 2.17
629 630 5.407387 CGTCATCTAGAGAGCTAGGAGTAAC 59.593 48.000 0.00 0.00 43.52 2.50
631 632 4.833938 TCGTCATCTAGAGAGCTAGGAGTA 59.166 45.833 0.00 0.00 43.52 2.59
633 634 4.245660 CTCGTCATCTAGAGAGCTAGGAG 58.754 52.174 0.00 0.00 43.52 3.69
634 635 3.007506 CCTCGTCATCTAGAGAGCTAGGA 59.992 52.174 0.00 0.00 43.52 2.94
635 636 3.007506 TCCTCGTCATCTAGAGAGCTAGG 59.992 52.174 0.00 2.93 43.52 3.02
636 637 3.994392 GTCCTCGTCATCTAGAGAGCTAG 59.006 52.174 0.00 0.00 44.48 3.42
637 638 3.388350 TGTCCTCGTCATCTAGAGAGCTA 59.612 47.826 0.00 0.00 36.65 3.32
835 841 3.039526 AGAGGGGAGGGAGGGAGG 61.040 72.222 0.00 0.00 0.00 4.30
836 842 2.612251 GAGAGGGGAGGGAGGGAG 59.388 72.222 0.00 0.00 0.00 4.30
837 843 3.036959 GGAGAGGGGAGGGAGGGA 61.037 72.222 0.00 0.00 0.00 4.20
838 844 3.368501 TGGAGAGGGGAGGGAGGG 61.369 72.222 0.00 0.00 0.00 4.30
839 845 2.041405 GTGGAGAGGGGAGGGAGG 60.041 72.222 0.00 0.00 0.00 4.30
840 846 2.041405 GGTGGAGAGGGGAGGGAG 60.041 72.222 0.00 0.00 0.00 4.30
841 847 3.695825 GGGTGGAGAGGGGAGGGA 61.696 72.222 0.00 0.00 0.00 4.20
969 987 2.453054 GGTGGTGGGTAGGGGAGA 59.547 66.667 0.00 0.00 0.00 3.71
973 999 3.081409 CCTCGGTGGTGGGTAGGG 61.081 72.222 0.00 0.00 0.00 3.53
974 1000 3.782443 GCCTCGGTGGTGGGTAGG 61.782 72.222 0.00 0.00 38.35 3.18
975 1001 4.143333 CGCCTCGGTGGTGGGTAG 62.143 72.222 1.75 0.00 42.43 3.18
1190 1217 1.340114 GGAACAGGTTAGGCAGGAAGG 60.340 57.143 0.00 0.00 0.00 3.46
1212 1239 4.823419 TATTGACGCACGCGGGGG 62.823 66.667 25.14 25.14 44.69 5.40
1217 1244 0.247695 GGAAAGCTATTGACGCACGC 60.248 55.000 0.00 0.00 0.00 5.34
1219 1246 0.247695 GCGGAAAGCTATTGACGCAC 60.248 55.000 13.76 0.00 41.37 5.34
1220 1247 2.086510 GCGGAAAGCTATTGACGCA 58.913 52.632 13.76 0.00 41.37 5.24
1265 1318 4.170062 CGAAGCAGCCGCACATGG 62.170 66.667 0.00 0.00 42.27 3.66
1343 1396 4.637091 GGGACGCCTAAATTAACTTAGCAA 59.363 41.667 0.00 0.00 0.00 3.91
1430 1485 5.001232 CGAACCCAATAGAACTTCCTTTCA 58.999 41.667 0.00 0.00 0.00 2.69
1505 1560 0.378962 ATCGTACAGACAGCTCGCTC 59.621 55.000 0.00 0.00 0.00 5.03
1680 1737 0.992802 GTCGCCACGAAGAGCTTTAG 59.007 55.000 0.00 0.00 37.72 1.85
1742 1806 8.613482 TCTCTAATAGTATGAACAAGACAGTCG 58.387 37.037 0.00 0.00 0.00 4.18
1908 1986 8.912988 AGAAACAATTCATAGGACTCAAAACAA 58.087 29.630 0.00 0.00 38.06 2.83
1913 1991 6.816640 CCGTAGAAACAATTCATAGGACTCAA 59.183 38.462 0.00 0.00 38.06 3.02
1923 2001 4.941263 CCCAGAATCCGTAGAAACAATTCA 59.059 41.667 0.00 0.00 38.06 2.57
1932 2011 6.431852 CCTTTTAAAAACCCAGAATCCGTAGA 59.568 38.462 1.66 0.00 0.00 2.59
1945 2024 5.241064 GTCTCACTCTCCCCTTTTAAAAACC 59.759 44.000 1.66 0.00 0.00 3.27
2020 2099 3.131046 GGGGTAAAACATGCATTCTGAGG 59.869 47.826 0.00 0.00 0.00 3.86
2037 2116 3.780294 ACTGCAACTGAGATTATGGGGTA 59.220 43.478 0.00 0.00 0.00 3.69
2049 2128 4.058124 GACAAGTATCACACTGCAACTGA 58.942 43.478 0.00 0.00 37.63 3.41
2057 2136 2.368548 TGTGGCTGACAAGTATCACACT 59.631 45.455 0.00 0.00 40.05 3.55
2233 2316 6.300703 ACTATGCCCACTTAACAAAACTACA 58.699 36.000 0.00 0.00 0.00 2.74
2345 2428 8.773404 ATTAGTCTGTTCATGGTACTGTTTAC 57.227 34.615 0.00 0.00 0.00 2.01
2539 2624 5.992729 TCAGTTAAATGCCAAACGTACTTC 58.007 37.500 0.00 0.00 0.00 3.01
3158 3258 8.174422 GCTAGAAACTTCAAGATGAGAATGAAC 58.826 37.037 0.00 0.00 0.00 3.18
3159 3259 7.879677 TGCTAGAAACTTCAAGATGAGAATGAA 59.120 33.333 0.00 0.00 0.00 2.57
3160 3260 7.389232 TGCTAGAAACTTCAAGATGAGAATGA 58.611 34.615 0.00 0.00 0.00 2.57
3161 3261 7.606858 TGCTAGAAACTTCAAGATGAGAATG 57.393 36.000 0.00 0.00 0.00 2.67
3162 3262 7.882271 ACTTGCTAGAAACTTCAAGATGAGAAT 59.118 33.333 11.14 0.00 39.22 2.40
3163 3263 7.220030 ACTTGCTAGAAACTTCAAGATGAGAA 58.780 34.615 11.14 0.00 39.22 2.87
3164 3264 6.763355 ACTTGCTAGAAACTTCAAGATGAGA 58.237 36.000 11.14 0.00 39.22 3.27
3552 3653 4.437239 TCATTTTCCACAAAACGCATGTT 58.563 34.783 0.00 0.00 40.98 2.71
3553 3654 4.052159 TCATTTTCCACAAAACGCATGT 57.948 36.364 0.00 0.00 34.24 3.21
3554 3655 4.507388 ACTTCATTTTCCACAAAACGCATG 59.493 37.500 0.00 0.00 34.24 4.06
3555 3656 4.507388 CACTTCATTTTCCACAAAACGCAT 59.493 37.500 0.00 0.00 34.24 4.73
3556 3657 3.862267 CACTTCATTTTCCACAAAACGCA 59.138 39.130 0.00 0.00 34.24 5.24
3557 3658 3.302415 GCACTTCATTTTCCACAAAACGC 60.302 43.478 0.00 0.00 34.24 4.84
3558 3659 3.862267 TGCACTTCATTTTCCACAAAACG 59.138 39.130 0.00 0.00 34.24 3.60
3696 4347 5.887598 ACTAAATGGCAGATAATGACTTGCA 59.112 36.000 0.00 0.00 38.04 4.08
3834 4488 8.244113 ACCAAGCTAACTCAATTTACTTATTGC 58.756 33.333 0.00 0.00 35.86 3.56
3844 4498 8.685838 TTGTAGTAAACCAAGCTAACTCAATT 57.314 30.769 0.00 0.00 0.00 2.32
4685 5350 7.026562 CCATAAACATCAACATCGCAAAAGTA 58.973 34.615 0.00 0.00 0.00 2.24
4739 5404 2.179427 GGAGTTCATTGGGGAAAAGGG 58.821 52.381 0.00 0.00 0.00 3.95
4740 5405 2.827921 CAGGAGTTCATTGGGGAAAAGG 59.172 50.000 0.00 0.00 0.00 3.11
4741 5406 3.766545 TCAGGAGTTCATTGGGGAAAAG 58.233 45.455 0.00 0.00 0.00 2.27
4742 5407 3.893753 TCAGGAGTTCATTGGGGAAAA 57.106 42.857 0.00 0.00 0.00 2.29
4743 5408 4.325030 GGTATCAGGAGTTCATTGGGGAAA 60.325 45.833 0.00 0.00 0.00 3.13
4744 5409 3.202151 GGTATCAGGAGTTCATTGGGGAA 59.798 47.826 0.00 0.00 0.00 3.97
4745 5410 2.777692 GGTATCAGGAGTTCATTGGGGA 59.222 50.000 0.00 0.00 0.00 4.81
4746 5411 2.158608 GGGTATCAGGAGTTCATTGGGG 60.159 54.545 0.00 0.00 0.00 4.96
4887 5560 2.910688 AGGACTTTCGAGCTCAAACA 57.089 45.000 15.40 0.00 0.00 2.83
5037 5727 6.018589 TGCCATGATTTTCACGAATGTAAA 57.981 33.333 0.00 0.00 30.72 2.01
5109 5799 4.737353 AAAAATCTGACGTTACGGGAAC 57.263 40.909 10.20 0.00 34.41 3.62


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.