Multiple sequence alignment - TraesCS7D01G118900
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G118900 | chr7D | 100.000 | 4132 | 0 | 0 | 1 | 4132 | 73742510 | 73746641 | 0.000000e+00 | 7631.0 |
1 | TraesCS7D01G118900 | chr7D | 85.088 | 342 | 45 | 4 | 1628 | 1966 | 74392420 | 74392758 | 1.100000e-90 | 344.0 |
2 | TraesCS7D01G118900 | chr7D | 82.132 | 319 | 50 | 4 | 2999 | 3315 | 73370116 | 73370429 | 2.450000e-67 | 267.0 |
3 | TraesCS7D01G118900 | chr7D | 75.980 | 204 | 35 | 5 | 130 | 331 | 16260539 | 16260730 | 4.400000e-15 | 93.5 |
4 | TraesCS7D01G118900 | chr7D | 95.918 | 49 | 2 | 0 | 2906 | 2954 | 73745364 | 73745412 | 3.420000e-11 | 80.5 |
5 | TraesCS7D01G118900 | chr7D | 95.918 | 49 | 2 | 0 | 2855 | 2903 | 73745415 | 73745463 | 3.420000e-11 | 80.5 |
6 | TraesCS7D01G118900 | chr7D | 97.436 | 39 | 1 | 0 | 1730 | 1768 | 65813746 | 65813708 | 2.670000e-07 | 67.6 |
7 | TraesCS7D01G118900 | chr7D | 85.000 | 60 | 9 | 0 | 813 | 872 | 73178052 | 73178111 | 1.240000e-05 | 62.1 |
8 | TraesCS7D01G118900 | chr7A | 93.519 | 1543 | 51 | 12 | 2107 | 3622 | 78219116 | 78220636 | 0.000000e+00 | 2250.0 |
9 | TraesCS7D01G118900 | chr7A | 95.357 | 1206 | 34 | 5 | 339 | 1544 | 78217034 | 78218217 | 0.000000e+00 | 1897.0 |
10 | TraesCS7D01G118900 | chr7A | 89.079 | 1401 | 72 | 21 | 2378 | 3724 | 78396757 | 78398130 | 0.000000e+00 | 1664.0 |
11 | TraesCS7D01G118900 | chr7A | 89.947 | 756 | 39 | 30 | 1547 | 2291 | 78218246 | 78218975 | 0.000000e+00 | 941.0 |
12 | TraesCS7D01G118900 | chr7A | 86.217 | 653 | 66 | 11 | 2890 | 3527 | 78395471 | 78396114 | 0.000000e+00 | 686.0 |
13 | TraesCS7D01G118900 | chr7A | 79.125 | 800 | 124 | 31 | 1000 | 1765 | 78414057 | 78414847 | 2.850000e-141 | 512.0 |
14 | TraesCS7D01G118900 | chr7A | 83.743 | 529 | 70 | 8 | 998 | 1519 | 78388261 | 78388780 | 1.730000e-133 | 486.0 |
15 | TraesCS7D01G118900 | chr7A | 89.914 | 347 | 30 | 4 | 1 | 347 | 78183478 | 78183819 | 3.790000e-120 | 442.0 |
16 | TraesCS7D01G118900 | chr7A | 94.203 | 276 | 14 | 1 | 2578 | 2851 | 78394879 | 78395154 | 1.780000e-113 | 420.0 |
17 | TraesCS7D01G118900 | chr7A | 96.226 | 212 | 8 | 0 | 3645 | 3856 | 78220628 | 78220839 | 8.500000e-92 | 348.0 |
18 | TraesCS7D01G118900 | chr7A | 86.486 | 296 | 33 | 4 | 2999 | 3292 | 77917132 | 77917422 | 6.670000e-83 | 318.0 |
19 | TraesCS7D01G118900 | chr7A | 75.528 | 805 | 107 | 49 | 1370 | 2134 | 78389074 | 78389828 | 3.100000e-81 | 313.0 |
20 | TraesCS7D01G118900 | chr7A | 93.750 | 192 | 11 | 1 | 3883 | 4073 | 78220836 | 78221027 | 1.880000e-73 | 287.0 |
21 | TraesCS7D01G118900 | chr7A | 79.899 | 398 | 25 | 27 | 1914 | 2293 | 78394182 | 78394542 | 1.480000e-59 | 241.0 |
22 | TraesCS7D01G118900 | chr7A | 74.922 | 638 | 99 | 37 | 922 | 1544 | 71134793 | 71134202 | 6.910000e-58 | 235.0 |
23 | TraesCS7D01G118900 | chr7A | 89.820 | 167 | 16 | 1 | 3549 | 3714 | 78396202 | 78396368 | 3.240000e-51 | 213.0 |
24 | TraesCS7D01G118900 | chr7A | 88.462 | 182 | 11 | 4 | 2292 | 2463 | 78394633 | 78394814 | 1.160000e-50 | 211.0 |
25 | TraesCS7D01G118900 | chr7A | 80.508 | 118 | 12 | 4 | 755 | 871 | 78413817 | 78413924 | 3.420000e-11 | 80.5 |
26 | TraesCS7D01G118900 | chr7B | 90.315 | 1239 | 56 | 15 | 2325 | 3531 | 16952505 | 16953711 | 0.000000e+00 | 1565.0 |
27 | TraesCS7D01G118900 | chr7B | 86.791 | 1128 | 80 | 35 | 479 | 1543 | 16950456 | 16951577 | 0.000000e+00 | 1194.0 |
28 | TraesCS7D01G118900 | chr7B | 95.913 | 416 | 17 | 0 | 1555 | 1970 | 16951708 | 16952123 | 0.000000e+00 | 675.0 |
29 | TraesCS7D01G118900 | chr7B | 89.147 | 516 | 39 | 9 | 2957 | 3466 | 17215280 | 17215784 | 9.750000e-176 | 627.0 |
30 | TraesCS7D01G118900 | chr7B | 78.594 | 939 | 147 | 32 | 616 | 1513 | 29830351 | 29829426 | 4.630000e-159 | 571.0 |
31 | TraesCS7D01G118900 | chr7B | 83.932 | 529 | 77 | 6 | 998 | 1519 | 17507728 | 17508255 | 2.220000e-137 | 499.0 |
32 | TraesCS7D01G118900 | chr7B | 84.795 | 342 | 46 | 4 | 1628 | 1966 | 17508476 | 17508814 | 5.120000e-89 | 339.0 |
33 | TraesCS7D01G118900 | chr7B | 95.652 | 161 | 7 | 0 | 2025 | 2185 | 16952142 | 16952302 | 4.100000e-65 | 259.0 |
34 | TraesCS7D01G118900 | chr7B | 80.864 | 324 | 49 | 8 | 2999 | 3315 | 16526260 | 16526577 | 4.130000e-60 | 243.0 |
35 | TraesCS7D01G118900 | chr7B | 91.477 | 176 | 10 | 4 | 3539 | 3713 | 16953766 | 16953937 | 1.920000e-58 | 237.0 |
36 | TraesCS7D01G118900 | chr7B | 78.238 | 193 | 22 | 11 | 684 | 871 | 17248581 | 17248758 | 5.650000e-19 | 106.0 |
37 | TraesCS7D01G118900 | chr7B | 97.917 | 48 | 1 | 0 | 3659 | 3706 | 17215785 | 17215832 | 2.650000e-12 | 84.2 |
38 | TraesCS7D01G118900 | chr7B | 97.674 | 43 | 1 | 0 | 2 | 44 | 562999537 | 562999495 | 1.590000e-09 | 75.0 |
39 | TraesCS7D01G118900 | chr2D | 82.759 | 551 | 76 | 11 | 999 | 1536 | 33581029 | 33580485 | 1.340000e-129 | 473.0 |
40 | TraesCS7D01G118900 | chr2D | 81.408 | 355 | 39 | 15 | 2358 | 2706 | 601807625 | 601807292 | 8.810000e-67 | 265.0 |
41 | TraesCS7D01G118900 | chr2D | 90.909 | 165 | 15 | 0 | 2025 | 2189 | 241364747 | 241364583 | 5.380000e-54 | 222.0 |
42 | TraesCS7D01G118900 | chr2B | 82.616 | 558 | 76 | 12 | 999 | 1542 | 55227450 | 55226900 | 1.340000e-129 | 473.0 |
43 | TraesCS7D01G118900 | chr2B | 81.623 | 604 | 77 | 22 | 957 | 1536 | 55699285 | 55698692 | 1.740000e-128 | 470.0 |
44 | TraesCS7D01G118900 | chr2B | 81.972 | 355 | 37 | 17 | 2358 | 2706 | 675713914 | 675714247 | 4.070000e-70 | 276.0 |
45 | TraesCS7D01G118900 | chr2B | 77.656 | 546 | 55 | 35 | 2358 | 2856 | 601733750 | 601734275 | 1.890000e-68 | 270.0 |
46 | TraesCS7D01G118900 | chr2B | 80.292 | 274 | 40 | 9 | 3030 | 3298 | 55224487 | 55224223 | 1.170000e-45 | 195.0 |
47 | TraesCS7D01G118900 | chr2A | 78.499 | 786 | 120 | 28 | 764 | 1526 | 36392808 | 36392049 | 1.740000e-128 | 470.0 |
48 | TraesCS7D01G118900 | chr6B | 90.809 | 272 | 20 | 5 | 2025 | 2293 | 471052095 | 471051826 | 3.930000e-95 | 359.0 |
49 | TraesCS7D01G118900 | chr6B | 86.782 | 174 | 15 | 5 | 2292 | 2457 | 710256864 | 710256691 | 1.960000e-43 | 187.0 |
50 | TraesCS7D01G118900 | chr6B | 94.175 | 103 | 5 | 1 | 2025 | 2126 | 466652761 | 466652863 | 5.530000e-34 | 156.0 |
51 | TraesCS7D01G118900 | chr6B | 95.122 | 41 | 1 | 1 | 2254 | 2293 | 466652910 | 466652950 | 3.450000e-06 | 63.9 |
52 | TraesCS7D01G118900 | chr4B | 88.930 | 271 | 16 | 10 | 2025 | 2293 | 591948082 | 591947824 | 5.150000e-84 | 322.0 |
53 | TraesCS7D01G118900 | chr4B | 76.166 | 193 | 32 | 9 | 143 | 333 | 657791290 | 657791470 | 5.690000e-14 | 89.8 |
54 | TraesCS7D01G118900 | chr6A | 80.899 | 356 | 41 | 17 | 2358 | 2706 | 561451851 | 561452186 | 5.300000e-64 | 255.0 |
55 | TraesCS7D01G118900 | chr6A | 86.857 | 175 | 14 | 6 | 2292 | 2457 | 303373780 | 303373954 | 1.960000e-43 | 187.0 |
56 | TraesCS7D01G118900 | chr6A | 97.727 | 44 | 1 | 0 | 2 | 45 | 348576250 | 348576293 | 4.430000e-10 | 76.8 |
57 | TraesCS7D01G118900 | chr6A | 91.071 | 56 | 0 | 4 | 2 | 55 | 3089490 | 3089542 | 2.060000e-08 | 71.3 |
58 | TraesCS7D01G118900 | chr4A | 80.845 | 355 | 41 | 16 | 2358 | 2706 | 30777984 | 30778317 | 1.910000e-63 | 254.0 |
59 | TraesCS7D01G118900 | chr1A | 87.356 | 174 | 14 | 5 | 2292 | 2457 | 577675655 | 577675482 | 4.220000e-45 | 193.0 |
60 | TraesCS7D01G118900 | chr1A | 89.091 | 55 | 3 | 3 | 2 | 55 | 298678209 | 298678261 | 9.590000e-07 | 65.8 |
61 | TraesCS7D01G118900 | chr5B | 86.782 | 174 | 15 | 5 | 2292 | 2457 | 121734371 | 121734198 | 1.960000e-43 | 187.0 |
62 | TraesCS7D01G118900 | chr5B | 86.782 | 174 | 15 | 5 | 2292 | 2457 | 509428704 | 509428877 | 1.960000e-43 | 187.0 |
63 | TraesCS7D01G118900 | chr3B | 82.292 | 192 | 31 | 3 | 139 | 329 | 102974465 | 102974654 | 3.310000e-36 | 163.0 |
64 | TraesCS7D01G118900 | chr3B | 94.175 | 103 | 5 | 1 | 2025 | 2126 | 771638768 | 771638666 | 5.530000e-34 | 156.0 |
65 | TraesCS7D01G118900 | chr3B | 95.122 | 41 | 1 | 1 | 2254 | 2293 | 771638619 | 771638579 | 3.450000e-06 | 63.9 |
66 | TraesCS7D01G118900 | chr1D | 79.909 | 219 | 43 | 1 | 114 | 331 | 400121788 | 400121570 | 4.280000e-35 | 159.0 |
67 | TraesCS7D01G118900 | chr1D | 82.353 | 170 | 27 | 3 | 161 | 329 | 310147010 | 310146843 | 1.200000e-30 | 145.0 |
68 | TraesCS7D01G118900 | chr1D | 97.778 | 45 | 0 | 1 | 2 | 45 | 268820496 | 268820452 | 4.430000e-10 | 76.8 |
69 | TraesCS7D01G118900 | chr1B | 93.204 | 103 | 6 | 1 | 2025 | 2126 | 426952325 | 426952427 | 2.570000e-32 | 150.0 |
70 | TraesCS7D01G118900 | chr1B | 91.860 | 86 | 6 | 1 | 2042 | 2126 | 125286618 | 125286533 | 7.260000e-23 | 119.0 |
71 | TraesCS7D01G118900 | chr1B | 95.122 | 41 | 1 | 1 | 2254 | 2293 | 44352863 | 44352903 | 3.450000e-06 | 63.9 |
72 | TraesCS7D01G118900 | chr1B | 95.122 | 41 | 1 | 1 | 2254 | 2293 | 426952474 | 426952514 | 3.450000e-06 | 63.9 |
73 | TraesCS7D01G118900 | chr4D | 80.226 | 177 | 30 | 5 | 164 | 337 | 496090291 | 496090465 | 1.210000e-25 | 128.0 |
74 | TraesCS7D01G118900 | chr3A | 76.966 | 178 | 38 | 3 | 156 | 331 | 728224289 | 728224465 | 9.450000e-17 | 99.0 |
75 | TraesCS7D01G118900 | chr3A | 90.909 | 55 | 2 | 3 | 2 | 55 | 98474455 | 98474403 | 2.060000e-08 | 71.3 |
76 | TraesCS7D01G118900 | chr3A | 97.561 | 41 | 0 | 1 | 2254 | 2293 | 7093152 | 7093112 | 7.410000e-08 | 69.4 |
77 | TraesCS7D01G118900 | chr5D | 76.398 | 161 | 35 | 3 | 173 | 331 | 54095455 | 54095296 | 2.650000e-12 | 84.2 |
78 | TraesCS7D01G118900 | chr5D | 97.674 | 43 | 1 | 0 | 2 | 44 | 205549021 | 205548979 | 1.590000e-09 | 75.0 |
79 | TraesCS7D01G118900 | chr5A | 97.778 | 45 | 0 | 1 | 2 | 45 | 304679988 | 304680032 | 4.430000e-10 | 76.8 |
80 | TraesCS7D01G118900 | chr3D | 83.077 | 65 | 11 | 0 | 243 | 307 | 550245087 | 550245023 | 4.460000e-05 | 60.2 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G118900 | chr7D | 73742510 | 73746641 | 4131 | False | 2597.333333 | 7631 | 97.278667 | 1 | 4132 | 3 | chr7D.!!$F5 | 4131 |
1 | TraesCS7D01G118900 | chr7A | 78217034 | 78221027 | 3993 | False | 1144.600000 | 2250 | 93.759800 | 339 | 4073 | 5 | chr7A.!!$F3 | 3734 |
2 | TraesCS7D01G118900 | chr7A | 78394182 | 78398130 | 3948 | False | 572.500000 | 1664 | 87.946667 | 1914 | 3724 | 6 | chr7A.!!$F5 | 1810 |
3 | TraesCS7D01G118900 | chr7A | 78388261 | 78389828 | 1567 | False | 399.500000 | 486 | 79.635500 | 998 | 2134 | 2 | chr7A.!!$F4 | 1136 |
4 | TraesCS7D01G118900 | chr7A | 78413817 | 78414847 | 1030 | False | 296.250000 | 512 | 79.816500 | 755 | 1765 | 2 | chr7A.!!$F6 | 1010 |
5 | TraesCS7D01G118900 | chr7A | 71134202 | 71134793 | 591 | True | 235.000000 | 235 | 74.922000 | 922 | 1544 | 1 | chr7A.!!$R1 | 622 |
6 | TraesCS7D01G118900 | chr7B | 16950456 | 16953937 | 3481 | False | 786.000000 | 1565 | 92.029600 | 479 | 3713 | 5 | chr7B.!!$F3 | 3234 |
7 | TraesCS7D01G118900 | chr7B | 29829426 | 29830351 | 925 | True | 571.000000 | 571 | 78.594000 | 616 | 1513 | 1 | chr7B.!!$R1 | 897 |
8 | TraesCS7D01G118900 | chr7B | 17507728 | 17508814 | 1086 | False | 419.000000 | 499 | 84.363500 | 998 | 1966 | 2 | chr7B.!!$F5 | 968 |
9 | TraesCS7D01G118900 | chr7B | 17215280 | 17215832 | 552 | False | 355.600000 | 627 | 93.532000 | 2957 | 3706 | 2 | chr7B.!!$F4 | 749 |
10 | TraesCS7D01G118900 | chr2D | 33580485 | 33581029 | 544 | True | 473.000000 | 473 | 82.759000 | 999 | 1536 | 1 | chr2D.!!$R1 | 537 |
11 | TraesCS7D01G118900 | chr2B | 55698692 | 55699285 | 593 | True | 470.000000 | 470 | 81.623000 | 957 | 1536 | 1 | chr2B.!!$R1 | 579 |
12 | TraesCS7D01G118900 | chr2B | 55224223 | 55227450 | 3227 | True | 334.000000 | 473 | 81.454000 | 999 | 3298 | 2 | chr2B.!!$R2 | 2299 |
13 | TraesCS7D01G118900 | chr2B | 601733750 | 601734275 | 525 | False | 270.000000 | 270 | 77.656000 | 2358 | 2856 | 1 | chr2B.!!$F1 | 498 |
14 | TraesCS7D01G118900 | chr2A | 36392049 | 36392808 | 759 | True | 470.000000 | 470 | 78.499000 | 764 | 1526 | 1 | chr2A.!!$R1 | 762 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
45 | 46 | 0.039074 | GGAGACGTATCAGATGCCGG | 60.039 | 60.0 | 12.92 | 0.00 | 0.00 | 6.13 | F |
132 | 133 | 0.040336 | CGTATGGGACCTCATCGTCG | 60.040 | 60.0 | 0.00 | 0.00 | 33.30 | 5.12 | F |
209 | 210 | 0.104855 | TATGATGAGTGCCGGTCAGC | 59.895 | 55.0 | 1.90 | 1.99 | 0.00 | 4.26 | F |
1544 | 2173 | 0.107703 | TCGAATTGCTTCCAGCGGAT | 60.108 | 50.0 | 0.00 | 0.00 | 46.26 | 4.18 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2017 | 2943 | 0.704076 | AGCACCCCCAATAGCAAAGA | 59.296 | 50.000 | 0.0 | 0.0 | 0.00 | 2.52 | R |
2023 | 2949 | 2.107204 | AGCAGATTAGCACCCCCAATAG | 59.893 | 50.000 | 0.0 | 0.0 | 36.85 | 1.73 | R |
2186 | 4460 | 3.372566 | CCCCAATAACCATCTAGCCACAA | 60.373 | 47.826 | 0.0 | 0.0 | 0.00 | 3.33 | R |
3195 | 7849 | 1.560860 | GCGTCCAGTTCTGCTGTCAC | 61.561 | 60.000 | 0.0 | 0.0 | 43.55 | 3.67 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
42 | 43 | 2.120232 | CGTTGGAGACGTATCAGATGC | 58.880 | 52.381 | 12.92 | 0.00 | 46.49 | 3.91 |
43 | 44 | 2.474816 | GTTGGAGACGTATCAGATGCC | 58.525 | 52.381 | 12.92 | 0.00 | 0.00 | 4.40 |
44 | 45 | 0.668535 | TGGAGACGTATCAGATGCCG | 59.331 | 55.000 | 12.92 | 0.00 | 0.00 | 5.69 |
45 | 46 | 0.039074 | GGAGACGTATCAGATGCCGG | 60.039 | 60.000 | 12.92 | 0.00 | 0.00 | 6.13 |
46 | 47 | 0.664767 | GAGACGTATCAGATGCCGGC | 60.665 | 60.000 | 22.73 | 22.73 | 0.00 | 6.13 |
47 | 48 | 1.664965 | GACGTATCAGATGCCGGCC | 60.665 | 63.158 | 26.77 | 9.73 | 0.00 | 6.13 |
48 | 49 | 2.734723 | CGTATCAGATGCCGGCCG | 60.735 | 66.667 | 26.77 | 21.04 | 0.00 | 6.13 |
49 | 50 | 2.357517 | GTATCAGATGCCGGCCGG | 60.358 | 66.667 | 40.26 | 40.26 | 38.57 | 6.13 |
60 | 61 | 2.613390 | CCGGCCGGCTTAAATAGAC | 58.387 | 57.895 | 34.96 | 4.75 | 0.00 | 2.59 |
69 | 70 | 4.274421 | GGCTTAAATAGACGAGTTTGGC | 57.726 | 45.455 | 0.00 | 0.00 | 0.00 | 4.52 |
70 | 71 | 3.939592 | GGCTTAAATAGACGAGTTTGGCT | 59.060 | 43.478 | 0.00 | 0.00 | 0.00 | 4.75 |
71 | 72 | 4.395231 | GGCTTAAATAGACGAGTTTGGCTT | 59.605 | 41.667 | 0.00 | 0.00 | 0.00 | 4.35 |
72 | 73 | 5.447413 | GGCTTAAATAGACGAGTTTGGCTTC | 60.447 | 44.000 | 0.00 | 0.00 | 0.00 | 3.86 |
73 | 74 | 5.447413 | GCTTAAATAGACGAGTTTGGCTTCC | 60.447 | 44.000 | 0.00 | 0.00 | 0.00 | 3.46 |
74 | 75 | 2.295253 | ATAGACGAGTTTGGCTTCCG | 57.705 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
75 | 76 | 0.245539 | TAGACGAGTTTGGCTTCCGG | 59.754 | 55.000 | 0.00 | 0.00 | 0.00 | 5.14 |
76 | 77 | 2.668550 | ACGAGTTTGGCTTCCGGC | 60.669 | 61.111 | 0.00 | 0.00 | 40.90 | 6.13 |
77 | 78 | 3.788766 | CGAGTTTGGCTTCCGGCG | 61.789 | 66.667 | 0.00 | 0.00 | 42.94 | 6.46 |
78 | 79 | 3.431725 | GAGTTTGGCTTCCGGCGG | 61.432 | 66.667 | 22.51 | 22.51 | 42.94 | 6.13 |
102 | 103 | 3.119096 | GGAGCGGCGTCTGGTTTC | 61.119 | 66.667 | 9.37 | 0.00 | 0.00 | 2.78 |
103 | 104 | 3.119096 | GAGCGGCGTCTGGTTTCC | 61.119 | 66.667 | 9.37 | 0.00 | 0.00 | 3.13 |
110 | 111 | 2.434359 | GTCTGGTTTCCGGGCGAG | 60.434 | 66.667 | 0.00 | 0.00 | 0.00 | 5.03 |
111 | 112 | 4.388499 | TCTGGTTTCCGGGCGAGC | 62.388 | 66.667 | 0.00 | 0.00 | 0.00 | 5.03 |
130 | 131 | 2.426651 | CCGTATGGGACCTCATCGT | 58.573 | 57.895 | 0.00 | 0.00 | 38.47 | 3.73 |
131 | 132 | 0.314302 | CCGTATGGGACCTCATCGTC | 59.686 | 60.000 | 0.00 | 0.00 | 38.47 | 4.20 |
132 | 133 | 0.040336 | CGTATGGGACCTCATCGTCG | 60.040 | 60.000 | 0.00 | 0.00 | 33.30 | 5.12 |
133 | 134 | 0.314302 | GTATGGGACCTCATCGTCGG | 59.686 | 60.000 | 0.00 | 0.00 | 33.30 | 4.79 |
134 | 135 | 0.106369 | TATGGGACCTCATCGTCGGT | 60.106 | 55.000 | 0.00 | 0.00 | 35.90 | 4.69 |
137 | 138 | 3.921521 | GACCTCATCGTCGGTCCT | 58.078 | 61.111 | 0.00 | 0.00 | 43.05 | 3.85 |
138 | 139 | 3.091318 | GACCTCATCGTCGGTCCTA | 57.909 | 57.895 | 0.00 | 0.00 | 43.05 | 2.94 |
139 | 140 | 1.606903 | GACCTCATCGTCGGTCCTAT | 58.393 | 55.000 | 0.00 | 0.00 | 43.05 | 2.57 |
140 | 141 | 1.267261 | GACCTCATCGTCGGTCCTATG | 59.733 | 57.143 | 0.00 | 0.00 | 43.05 | 2.23 |
141 | 142 | 1.319541 | CCTCATCGTCGGTCCTATGT | 58.680 | 55.000 | 0.00 | 0.00 | 0.00 | 2.29 |
142 | 143 | 1.001268 | CCTCATCGTCGGTCCTATGTG | 60.001 | 57.143 | 0.00 | 0.00 | 0.00 | 3.21 |
143 | 144 | 1.001268 | CTCATCGTCGGTCCTATGTGG | 60.001 | 57.143 | 0.00 | 0.00 | 37.10 | 4.17 |
144 | 145 | 0.597637 | CATCGTCGGTCCTATGTGGC | 60.598 | 60.000 | 0.00 | 0.00 | 35.26 | 5.01 |
145 | 146 | 2.071844 | ATCGTCGGTCCTATGTGGCG | 62.072 | 60.000 | 0.00 | 0.00 | 35.26 | 5.69 |
146 | 147 | 2.767445 | CGTCGGTCCTATGTGGCGA | 61.767 | 63.158 | 0.00 | 0.00 | 35.26 | 5.54 |
147 | 148 | 1.514087 | GTCGGTCCTATGTGGCGAA | 59.486 | 57.895 | 0.00 | 0.00 | 33.38 | 4.70 |
148 | 149 | 0.804933 | GTCGGTCCTATGTGGCGAAC | 60.805 | 60.000 | 0.00 | 0.00 | 33.38 | 3.95 |
149 | 150 | 1.876714 | CGGTCCTATGTGGCGAACG | 60.877 | 63.158 | 0.00 | 0.00 | 35.26 | 3.95 |
150 | 151 | 2.171725 | GGTCCTATGTGGCGAACGC | 61.172 | 63.158 | 10.81 | 10.81 | 41.06 | 4.84 |
168 | 169 | 2.923035 | CCCCGGACGCCTCCATAT | 60.923 | 66.667 | 0.73 | 0.00 | 36.12 | 1.78 |
169 | 170 | 2.657237 | CCCGGACGCCTCCATATC | 59.343 | 66.667 | 0.73 | 0.00 | 36.12 | 1.63 |
170 | 171 | 2.657237 | CCGGACGCCTCCATATCC | 59.343 | 66.667 | 0.00 | 0.00 | 36.12 | 2.59 |
172 | 173 | 2.048127 | GGACGCCTCCATATCCGC | 60.048 | 66.667 | 0.00 | 0.00 | 36.42 | 5.54 |
173 | 174 | 2.048127 | GACGCCTCCATATCCGCC | 60.048 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
174 | 175 | 3.591254 | GACGCCTCCATATCCGCCC | 62.591 | 68.421 | 0.00 | 0.00 | 0.00 | 6.13 |
175 | 176 | 3.314331 | CGCCTCCATATCCGCCCT | 61.314 | 66.667 | 0.00 | 0.00 | 0.00 | 5.19 |
176 | 177 | 1.982395 | CGCCTCCATATCCGCCCTA | 60.982 | 63.158 | 0.00 | 0.00 | 0.00 | 3.53 |
177 | 178 | 1.330655 | CGCCTCCATATCCGCCCTAT | 61.331 | 60.000 | 0.00 | 0.00 | 0.00 | 2.57 |
178 | 179 | 1.789523 | GCCTCCATATCCGCCCTATA | 58.210 | 55.000 | 0.00 | 0.00 | 0.00 | 1.31 |
179 | 180 | 2.330216 | GCCTCCATATCCGCCCTATAT | 58.670 | 52.381 | 0.00 | 0.00 | 0.00 | 0.86 |
180 | 181 | 2.706190 | GCCTCCATATCCGCCCTATATT | 59.294 | 50.000 | 0.00 | 0.00 | 0.00 | 1.28 |
181 | 182 | 3.136626 | GCCTCCATATCCGCCCTATATTT | 59.863 | 47.826 | 0.00 | 0.00 | 0.00 | 1.40 |
182 | 183 | 4.708177 | CCTCCATATCCGCCCTATATTTG | 58.292 | 47.826 | 0.00 | 0.00 | 0.00 | 2.32 |
183 | 184 | 4.444876 | CCTCCATATCCGCCCTATATTTGG | 60.445 | 50.000 | 0.00 | 0.00 | 0.00 | 3.28 |
194 | 195 | 4.858850 | CCCTATATTTGGGCTGCATATGA | 58.141 | 43.478 | 6.97 | 0.00 | 37.99 | 2.15 |
195 | 196 | 5.452255 | CCCTATATTTGGGCTGCATATGAT | 58.548 | 41.667 | 6.97 | 0.00 | 37.99 | 2.45 |
196 | 197 | 5.301045 | CCCTATATTTGGGCTGCATATGATG | 59.699 | 44.000 | 6.97 | 0.00 | 37.99 | 3.07 |
197 | 198 | 6.124340 | CCTATATTTGGGCTGCATATGATGA | 58.876 | 40.000 | 6.97 | 0.00 | 0.00 | 2.92 |
198 | 199 | 6.262496 | CCTATATTTGGGCTGCATATGATGAG | 59.738 | 42.308 | 6.97 | 0.00 | 0.00 | 2.90 |
199 | 200 | 3.301794 | TTTGGGCTGCATATGATGAGT | 57.698 | 42.857 | 6.97 | 0.00 | 0.00 | 3.41 |
200 | 201 | 2.265589 | TGGGCTGCATATGATGAGTG | 57.734 | 50.000 | 6.97 | 0.00 | 0.00 | 3.51 |
201 | 202 | 0.879765 | GGGCTGCATATGATGAGTGC | 59.120 | 55.000 | 6.97 | 0.65 | 39.26 | 4.40 |
202 | 203 | 0.879765 | GGCTGCATATGATGAGTGCC | 59.120 | 55.000 | 6.97 | 6.16 | 38.06 | 5.01 |
203 | 204 | 0.516001 | GCTGCATATGATGAGTGCCG | 59.484 | 55.000 | 6.97 | 0.00 | 38.06 | 5.69 |
204 | 205 | 1.154197 | CTGCATATGATGAGTGCCGG | 58.846 | 55.000 | 6.97 | 0.00 | 38.06 | 6.13 |
205 | 206 | 0.469494 | TGCATATGATGAGTGCCGGT | 59.531 | 50.000 | 6.97 | 0.00 | 38.06 | 5.28 |
206 | 207 | 1.151668 | GCATATGATGAGTGCCGGTC | 58.848 | 55.000 | 6.97 | 0.00 | 32.88 | 4.79 |
207 | 208 | 1.541015 | GCATATGATGAGTGCCGGTCA | 60.541 | 52.381 | 6.97 | 0.00 | 32.88 | 4.02 |
208 | 209 | 2.410939 | CATATGATGAGTGCCGGTCAG | 58.589 | 52.381 | 1.90 | 0.00 | 0.00 | 3.51 |
209 | 210 | 0.104855 | TATGATGAGTGCCGGTCAGC | 59.895 | 55.000 | 1.90 | 1.99 | 0.00 | 4.26 |
210 | 211 | 2.512515 | GATGAGTGCCGGTCAGCC | 60.513 | 66.667 | 1.90 | 0.00 | 0.00 | 4.85 |
211 | 212 | 4.101448 | ATGAGTGCCGGTCAGCCC | 62.101 | 66.667 | 1.90 | 0.00 | 0.00 | 5.19 |
238 | 239 | 8.577048 | AGCTTTTAAGGTCTATTTAAAGGACC | 57.423 | 34.615 | 24.20 | 24.20 | 46.94 | 4.46 |
245 | 246 | 5.377478 | GGTCTATTTAAAGGACCATCTGGG | 58.623 | 45.833 | 25.55 | 0.00 | 46.14 | 4.45 |
273 | 274 | 7.596749 | AAAAATTATGACTAGTCAGTGACCG | 57.403 | 36.000 | 28.29 | 13.36 | 43.61 | 4.79 |
274 | 275 | 4.920640 | ATTATGACTAGTCAGTGACCGG | 57.079 | 45.455 | 28.29 | 14.42 | 43.61 | 5.28 |
275 | 276 | 1.475403 | ATGACTAGTCAGTGACCGGG | 58.525 | 55.000 | 28.29 | 12.05 | 43.61 | 5.73 |
276 | 277 | 1.248785 | TGACTAGTCAGTGACCGGGC | 61.249 | 60.000 | 21.74 | 14.76 | 34.21 | 6.13 |
277 | 278 | 1.228769 | ACTAGTCAGTGACCGGGCA | 60.229 | 57.895 | 19.71 | 5.41 | 32.25 | 5.36 |
278 | 279 | 1.251527 | ACTAGTCAGTGACCGGGCAG | 61.252 | 60.000 | 12.52 | 0.00 | 32.25 | 4.85 |
279 | 280 | 2.564553 | CTAGTCAGTGACCGGGCAGC | 62.565 | 65.000 | 12.52 | 5.88 | 32.18 | 5.25 |
296 | 297 | 4.280494 | CCCGCCCGGACGTATGAG | 62.280 | 72.222 | 9.94 | 0.00 | 37.50 | 2.90 |
297 | 298 | 3.214123 | CCGCCCGGACGTATGAGA | 61.214 | 66.667 | 9.94 | 0.00 | 37.50 | 3.27 |
298 | 299 | 2.025727 | CGCCCGGACGTATGAGAC | 59.974 | 66.667 | 0.73 | 0.00 | 0.00 | 3.36 |
310 | 311 | 1.517276 | GTATGAGACGGATTTGACGCG | 59.483 | 52.381 | 3.53 | 3.53 | 34.00 | 6.01 |
311 | 312 | 1.421410 | ATGAGACGGATTTGACGCGC | 61.421 | 55.000 | 5.73 | 0.00 | 34.00 | 6.86 |
312 | 313 | 2.799540 | GAGACGGATTTGACGCGCC | 61.800 | 63.158 | 5.73 | 0.00 | 34.00 | 6.53 |
313 | 314 | 3.861263 | GACGGATTTGACGCGCCC | 61.861 | 66.667 | 5.73 | 0.00 | 34.00 | 6.13 |
314 | 315 | 4.388499 | ACGGATTTGACGCGCCCT | 62.388 | 61.111 | 5.73 | 0.00 | 34.00 | 5.19 |
315 | 316 | 3.864686 | CGGATTTGACGCGCCCTG | 61.865 | 66.667 | 5.73 | 0.00 | 0.00 | 4.45 |
316 | 317 | 4.179579 | GGATTTGACGCGCCCTGC | 62.180 | 66.667 | 5.73 | 0.00 | 41.47 | 4.85 |
317 | 318 | 3.127533 | GATTTGACGCGCCCTGCT | 61.128 | 61.111 | 5.73 | 0.00 | 43.27 | 4.24 |
318 | 319 | 3.386867 | GATTTGACGCGCCCTGCTG | 62.387 | 63.158 | 5.73 | 0.00 | 43.27 | 4.41 |
319 | 320 | 4.927782 | TTTGACGCGCCCTGCTGT | 62.928 | 61.111 | 5.73 | 0.00 | 43.27 | 4.40 |
320 | 321 | 2.796483 | ATTTGACGCGCCCTGCTGTA | 62.796 | 55.000 | 5.73 | 0.00 | 43.27 | 2.74 |
321 | 322 | 3.932580 | TTGACGCGCCCTGCTGTAG | 62.933 | 63.158 | 5.73 | 0.00 | 43.27 | 2.74 |
322 | 323 | 4.129737 | GACGCGCCCTGCTGTAGA | 62.130 | 66.667 | 5.73 | 0.00 | 43.27 | 2.59 |
323 | 324 | 3.432051 | GACGCGCCCTGCTGTAGAT | 62.432 | 63.158 | 5.73 | 0.00 | 43.27 | 1.98 |
324 | 325 | 2.963854 | CGCGCCCTGCTGTAGATG | 60.964 | 66.667 | 0.00 | 0.00 | 43.27 | 2.90 |
325 | 326 | 3.275338 | GCGCCCTGCTGTAGATGC | 61.275 | 66.667 | 0.00 | 0.00 | 41.73 | 3.91 |
326 | 327 | 2.503061 | CGCCCTGCTGTAGATGCT | 59.497 | 61.111 | 0.00 | 0.00 | 0.00 | 3.79 |
327 | 328 | 1.593750 | CGCCCTGCTGTAGATGCTC | 60.594 | 63.158 | 0.00 | 0.00 | 0.00 | 4.26 |
328 | 329 | 1.828768 | GCCCTGCTGTAGATGCTCT | 59.171 | 57.895 | 0.00 | 0.00 | 0.00 | 4.09 |
329 | 330 | 1.043816 | GCCCTGCTGTAGATGCTCTA | 58.956 | 55.000 | 0.00 | 0.00 | 0.00 | 2.43 |
330 | 331 | 1.414181 | GCCCTGCTGTAGATGCTCTAA | 59.586 | 52.381 | 0.00 | 0.00 | 29.58 | 2.10 |
331 | 332 | 2.804933 | GCCCTGCTGTAGATGCTCTAAC | 60.805 | 54.545 | 0.00 | 0.00 | 29.58 | 2.34 |
332 | 333 | 2.697751 | CCCTGCTGTAGATGCTCTAACT | 59.302 | 50.000 | 0.00 | 0.00 | 29.58 | 2.24 |
333 | 334 | 3.243704 | CCCTGCTGTAGATGCTCTAACTC | 60.244 | 52.174 | 0.00 | 0.00 | 29.58 | 3.01 |
334 | 335 | 3.243704 | CCTGCTGTAGATGCTCTAACTCC | 60.244 | 52.174 | 0.00 | 0.00 | 29.58 | 3.85 |
335 | 336 | 3.365472 | TGCTGTAGATGCTCTAACTCCA | 58.635 | 45.455 | 0.00 | 0.00 | 29.58 | 3.86 |
336 | 337 | 3.131223 | TGCTGTAGATGCTCTAACTCCAC | 59.869 | 47.826 | 0.00 | 0.00 | 29.58 | 4.02 |
337 | 338 | 3.131223 | GCTGTAGATGCTCTAACTCCACA | 59.869 | 47.826 | 0.00 | 0.00 | 29.58 | 4.17 |
338 | 339 | 4.202202 | GCTGTAGATGCTCTAACTCCACAT | 60.202 | 45.833 | 0.00 | 0.00 | 29.58 | 3.21 |
339 | 340 | 5.010112 | GCTGTAGATGCTCTAACTCCACATA | 59.990 | 44.000 | 0.00 | 0.00 | 29.58 | 2.29 |
340 | 341 | 6.461648 | GCTGTAGATGCTCTAACTCCACATAA | 60.462 | 42.308 | 0.00 | 0.00 | 29.58 | 1.90 |
367 | 368 | 6.412653 | ACAATTACAAAACGATGAAACGACAC | 59.587 | 34.615 | 0.00 | 0.00 | 37.03 | 3.67 |
368 | 369 | 5.466432 | TTACAAAACGATGAAACGACACA | 57.534 | 34.783 | 0.00 | 0.00 | 37.03 | 3.72 |
369 | 370 | 4.545823 | ACAAAACGATGAAACGACACAT | 57.454 | 36.364 | 0.00 | 0.00 | 37.03 | 3.21 |
370 | 371 | 4.278858 | ACAAAACGATGAAACGACACATG | 58.721 | 39.130 | 0.00 | 0.00 | 37.03 | 3.21 |
371 | 372 | 3.536158 | AAACGATGAAACGACACATGG | 57.464 | 42.857 | 0.00 | 0.00 | 37.03 | 3.66 |
372 | 373 | 1.438651 | ACGATGAAACGACACATGGG | 58.561 | 50.000 | 0.00 | 0.00 | 37.03 | 4.00 |
373 | 374 | 1.001520 | ACGATGAAACGACACATGGGA | 59.998 | 47.619 | 0.00 | 0.00 | 37.03 | 4.37 |
374 | 375 | 2.073056 | CGATGAAACGACACATGGGAA | 58.927 | 47.619 | 0.00 | 0.00 | 35.09 | 3.97 |
375 | 376 | 2.482336 | CGATGAAACGACACATGGGAAA | 59.518 | 45.455 | 0.00 | 0.00 | 35.09 | 3.13 |
376 | 377 | 3.126858 | CGATGAAACGACACATGGGAAAT | 59.873 | 43.478 | 0.00 | 0.00 | 35.09 | 2.17 |
383 | 384 | 3.753272 | ACGACACATGGGAAATTTGAGAG | 59.247 | 43.478 | 0.00 | 0.00 | 0.00 | 3.20 |
394 | 395 | 6.323482 | TGGGAAATTTGAGAGTTGACATTCAA | 59.677 | 34.615 | 0.00 | 0.00 | 33.32 | 2.69 |
906 | 977 | 2.283676 | TTTCCTCCTCCTCGCCGT | 60.284 | 61.111 | 0.00 | 0.00 | 0.00 | 5.68 |
919 | 997 | 1.451387 | CGCCGTAGCCCCAAGAAAT | 60.451 | 57.895 | 0.00 | 0.00 | 34.57 | 2.17 |
1544 | 2173 | 0.107703 | TCGAATTGCTTCCAGCGGAT | 60.108 | 50.000 | 0.00 | 0.00 | 46.26 | 4.18 |
1545 | 2174 | 1.138069 | TCGAATTGCTTCCAGCGGATA | 59.862 | 47.619 | 0.00 | 0.00 | 46.26 | 2.59 |
1546 | 2175 | 1.528586 | CGAATTGCTTCCAGCGGATAG | 59.471 | 52.381 | 0.00 | 1.72 | 46.26 | 2.08 |
1547 | 2176 | 1.876156 | GAATTGCTTCCAGCGGATAGG | 59.124 | 52.381 | 0.00 | 0.00 | 46.26 | 2.57 |
1550 | 2179 | 1.271840 | TGCTTCCAGCGGATAGGGTT | 61.272 | 55.000 | 0.00 | 0.00 | 46.26 | 4.11 |
1673 | 2528 | 1.480545 | CAGATCCGGTACATGGTGTCA | 59.519 | 52.381 | 0.00 | 0.00 | 0.00 | 3.58 |
1889 | 2753 | 2.101770 | GGCGACCTCTTACCGACG | 59.898 | 66.667 | 0.00 | 0.00 | 0.00 | 5.12 |
1970 | 2896 | 7.446625 | CCCAACTTCTTAATGATCTCCTAATGG | 59.553 | 40.741 | 0.00 | 0.00 | 0.00 | 3.16 |
1974 | 2900 | 8.371699 | ACTTCTTAATGATCTCCTAATGGTAGC | 58.628 | 37.037 | 0.00 | 0.00 | 34.23 | 3.58 |
1975 | 2901 | 7.246171 | TCTTAATGATCTCCTAATGGTAGCC | 57.754 | 40.000 | 0.00 | 0.00 | 34.23 | 3.93 |
1976 | 2902 | 7.019388 | TCTTAATGATCTCCTAATGGTAGCCT | 58.981 | 38.462 | 0.00 | 0.00 | 34.23 | 4.58 |
1977 | 2903 | 7.514127 | TCTTAATGATCTCCTAATGGTAGCCTT | 59.486 | 37.037 | 0.00 | 0.00 | 34.23 | 4.35 |
1979 | 2905 | 4.556697 | TGATCTCCTAATGGTAGCCTTGA | 58.443 | 43.478 | 0.00 | 0.00 | 34.23 | 3.02 |
1983 | 2909 | 4.968719 | TCTCCTAATGGTAGCCTTGATTGA | 59.031 | 41.667 | 0.00 | 0.00 | 34.23 | 2.57 |
1988 | 2914 | 7.068593 | TCCTAATGGTAGCCTTGATTGAATTTG | 59.931 | 37.037 | 0.00 | 0.00 | 34.23 | 2.32 |
1989 | 2915 | 6.610075 | AATGGTAGCCTTGATTGAATTTGT | 57.390 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
1990 | 2916 | 6.610075 | ATGGTAGCCTTGATTGAATTTGTT | 57.390 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
1991 | 2917 | 7.716799 | ATGGTAGCCTTGATTGAATTTGTTA | 57.283 | 32.000 | 0.00 | 0.00 | 0.00 | 2.41 |
1992 | 2918 | 7.716799 | TGGTAGCCTTGATTGAATTTGTTAT | 57.283 | 32.000 | 0.00 | 0.00 | 0.00 | 1.89 |
1993 | 2919 | 7.546358 | TGGTAGCCTTGATTGAATTTGTTATG | 58.454 | 34.615 | 0.00 | 0.00 | 0.00 | 1.90 |
1994 | 2920 | 6.980397 | GGTAGCCTTGATTGAATTTGTTATGG | 59.020 | 38.462 | 0.00 | 0.00 | 0.00 | 2.74 |
1995 | 2921 | 6.855763 | AGCCTTGATTGAATTTGTTATGGA | 57.144 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
1996 | 2922 | 6.633856 | AGCCTTGATTGAATTTGTTATGGAC | 58.366 | 36.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1997 | 2923 | 6.438425 | AGCCTTGATTGAATTTGTTATGGACT | 59.562 | 34.615 | 0.00 | 0.00 | 0.00 | 3.85 |
1998 | 2924 | 7.615365 | AGCCTTGATTGAATTTGTTATGGACTA | 59.385 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
1999 | 2925 | 8.416329 | GCCTTGATTGAATTTGTTATGGACTAT | 58.584 | 33.333 | 0.00 | 0.00 | 0.00 | 2.12 |
2003 | 2929 | 9.585099 | TGATTGAATTTGTTATGGACTATTTGC | 57.415 | 29.630 | 0.00 | 0.00 | 0.00 | 3.68 |
2004 | 2930 | 9.807649 | GATTGAATTTGTTATGGACTATTTGCT | 57.192 | 29.630 | 0.00 | 0.00 | 0.00 | 3.91 |
2005 | 2931 | 8.984891 | TTGAATTTGTTATGGACTATTTGCTG | 57.015 | 30.769 | 0.00 | 0.00 | 0.00 | 4.41 |
2006 | 2932 | 8.121305 | TGAATTTGTTATGGACTATTTGCTGT | 57.879 | 30.769 | 0.00 | 0.00 | 0.00 | 4.40 |
2007 | 2933 | 9.237187 | TGAATTTGTTATGGACTATTTGCTGTA | 57.763 | 29.630 | 0.00 | 0.00 | 0.00 | 2.74 |
2010 | 2936 | 7.566760 | TTGTTATGGACTATTTGCTGTATGG | 57.433 | 36.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2011 | 2937 | 5.530915 | TGTTATGGACTATTTGCTGTATGGC | 59.469 | 40.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2012 | 2938 | 2.930950 | TGGACTATTTGCTGTATGGCC | 58.069 | 47.619 | 0.00 | 0.00 | 0.00 | 5.36 |
2013 | 2939 | 2.240921 | TGGACTATTTGCTGTATGGCCA | 59.759 | 45.455 | 8.56 | 8.56 | 0.00 | 5.36 |
2014 | 2940 | 3.117550 | TGGACTATTTGCTGTATGGCCAT | 60.118 | 43.478 | 24.45 | 24.45 | 0.00 | 4.40 |
2015 | 2941 | 3.254166 | GGACTATTTGCTGTATGGCCATG | 59.746 | 47.826 | 29.04 | 12.96 | 0.00 | 3.66 |
2016 | 2942 | 4.136796 | GACTATTTGCTGTATGGCCATGA | 58.863 | 43.478 | 29.04 | 13.54 | 0.00 | 3.07 |
2017 | 2943 | 4.733165 | ACTATTTGCTGTATGGCCATGAT | 58.267 | 39.130 | 29.04 | 5.35 | 0.00 | 2.45 |
2018 | 2944 | 4.763793 | ACTATTTGCTGTATGGCCATGATC | 59.236 | 41.667 | 29.04 | 17.72 | 0.00 | 2.92 |
2019 | 2945 | 3.301794 | TTTGCTGTATGGCCATGATCT | 57.698 | 42.857 | 29.04 | 4.46 | 0.00 | 2.75 |
2020 | 2946 | 3.301794 | TTGCTGTATGGCCATGATCTT | 57.698 | 42.857 | 29.04 | 3.59 | 0.00 | 2.40 |
2021 | 2947 | 3.301794 | TGCTGTATGGCCATGATCTTT | 57.698 | 42.857 | 29.04 | 2.72 | 0.00 | 2.52 |
2022 | 2948 | 2.953648 | TGCTGTATGGCCATGATCTTTG | 59.046 | 45.455 | 29.04 | 11.58 | 0.00 | 2.77 |
2023 | 2949 | 2.288030 | GCTGTATGGCCATGATCTTTGC | 60.288 | 50.000 | 29.04 | 16.99 | 0.00 | 3.68 |
2217 | 4492 | 1.488812 | TGGTTATTGGGGGACAGATCG | 59.511 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
2290 | 4658 | 7.666623 | TCATACTACTCACAATCAACAGTCAA | 58.333 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
2344 | 4750 | 6.017275 | AGACAGAGTTATCCGTATTTAGACCG | 60.017 | 42.308 | 0.00 | 0.00 | 0.00 | 4.79 |
2445 | 6887 | 8.863049 | CACTATTATTTTCTGGTTTTGCACATC | 58.137 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
2739 | 7209 | 9.794653 | GAACTCGTCTGAAAATTAAAAGTAGTC | 57.205 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
2851 | 7388 | 9.552114 | CACATTTCTGTTCTTGATTCAGATAAC | 57.448 | 33.333 | 0.00 | 0.00 | 37.91 | 1.89 |
2856 | 7393 | 6.815641 | TCTGTTCTTGATTCAGATAACTCAGC | 59.184 | 38.462 | 8.42 | 0.00 | 34.00 | 4.26 |
2857 | 7394 | 6.466812 | TGTTCTTGATTCAGATAACTCAGCA | 58.533 | 36.000 | 8.42 | 0.00 | 0.00 | 4.41 |
2860 | 7397 | 6.939622 | TCTTGATTCAGATAACTCAGCAGAA | 58.060 | 36.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2861 | 7398 | 7.389232 | TCTTGATTCAGATAACTCAGCAGAAA | 58.611 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
2862 | 7399 | 8.045507 | TCTTGATTCAGATAACTCAGCAGAAAT | 58.954 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
2863 | 7400 | 8.571461 | TTGATTCAGATAACTCAGCAGAAATT | 57.429 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
2864 | 7401 | 9.671279 | TTGATTCAGATAACTCAGCAGAAATTA | 57.329 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
2865 | 7402 | 9.842775 | TGATTCAGATAACTCAGCAGAAATTAT | 57.157 | 29.630 | 0.00 | 0.00 | 0.00 | 1.28 |
2867 | 7404 | 8.442632 | TTCAGATAACTCAGCAGAAATTATGG | 57.557 | 34.615 | 1.40 | 0.00 | 0.00 | 2.74 |
2868 | 7405 | 7.795047 | TCAGATAACTCAGCAGAAATTATGGA | 58.205 | 34.615 | 1.40 | 0.00 | 0.00 | 3.41 |
2869 | 7406 | 8.267183 | TCAGATAACTCAGCAGAAATTATGGAA | 58.733 | 33.333 | 1.40 | 0.00 | 0.00 | 3.53 |
2870 | 7407 | 8.341173 | CAGATAACTCAGCAGAAATTATGGAAC | 58.659 | 37.037 | 1.40 | 0.00 | 0.00 | 3.62 |
2871 | 7408 | 5.904362 | AACTCAGCAGAAATTATGGAACC | 57.096 | 39.130 | 0.00 | 0.00 | 0.00 | 3.62 |
2872 | 7409 | 5.184892 | ACTCAGCAGAAATTATGGAACCT | 57.815 | 39.130 | 0.00 | 0.00 | 0.00 | 3.50 |
2873 | 7410 | 6.313519 | ACTCAGCAGAAATTATGGAACCTA | 57.686 | 37.500 | 0.00 | 0.00 | 0.00 | 3.08 |
2874 | 7411 | 6.721318 | ACTCAGCAGAAATTATGGAACCTAA | 58.279 | 36.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2875 | 7412 | 7.175104 | ACTCAGCAGAAATTATGGAACCTAAA | 58.825 | 34.615 | 0.00 | 0.00 | 0.00 | 1.85 |
2876 | 7413 | 7.669722 | ACTCAGCAGAAATTATGGAACCTAAAA | 59.330 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
2877 | 7414 | 8.055279 | TCAGCAGAAATTATGGAACCTAAAAG | 57.945 | 34.615 | 0.00 | 0.00 | 0.00 | 2.27 |
2878 | 7415 | 7.122650 | TCAGCAGAAATTATGGAACCTAAAAGG | 59.877 | 37.037 | 0.00 | 0.00 | 42.49 | 3.11 |
2879 | 7416 | 6.042777 | GCAGAAATTATGGAACCTAAAAGGC | 58.957 | 40.000 | 0.00 | 0.00 | 39.63 | 4.35 |
2880 | 7417 | 6.127338 | GCAGAAATTATGGAACCTAAAAGGCT | 60.127 | 38.462 | 0.00 | 0.00 | 39.63 | 4.58 |
2881 | 7418 | 7.068226 | GCAGAAATTATGGAACCTAAAAGGCTA | 59.932 | 37.037 | 0.00 | 0.00 | 39.63 | 3.93 |
2882 | 7419 | 8.624776 | CAGAAATTATGGAACCTAAAAGGCTAG | 58.375 | 37.037 | 0.00 | 0.00 | 39.63 | 3.42 |
2883 | 7420 | 8.336987 | AGAAATTATGGAACCTAAAAGGCTAGT | 58.663 | 33.333 | 0.00 | 0.00 | 39.63 | 2.57 |
2890 | 7427 | 7.463431 | TGGAACCTAAAAGGCTAGTCATTTTA | 58.537 | 34.615 | 2.51 | 9.05 | 39.63 | 1.52 |
2941 | 7478 | 7.463431 | TGGAACCTAAAAGGCTAGTCATTTTA | 58.537 | 34.615 | 2.51 | 9.05 | 39.63 | 1.52 |
3195 | 7849 | 2.709125 | TTTCGCCACCTCGGACACAG | 62.709 | 60.000 | 0.00 | 0.00 | 36.56 | 3.66 |
3498 | 8164 | 4.941263 | AGTGAGCTGCCGATATTGTTTTTA | 59.059 | 37.500 | 0.00 | 0.00 | 0.00 | 1.52 |
3570 | 8284 | 4.395231 | AGTTTCTTTTAGGCTACGCATTCC | 59.605 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
3657 | 8372 | 2.825086 | AGTGTCTCGTGTTTTGTTGC | 57.175 | 45.000 | 0.00 | 0.00 | 0.00 | 4.17 |
3770 | 8487 | 2.223745 | TGTTCTCCCTTTTTACGTGGC | 58.776 | 47.619 | 0.00 | 0.00 | 0.00 | 5.01 |
3806 | 8523 | 4.095334 | TCGAGTGCAGTAGTATTTCGCTTA | 59.905 | 41.667 | 0.00 | 0.00 | 0.00 | 3.09 |
3807 | 8524 | 4.204573 | CGAGTGCAGTAGTATTTCGCTTAC | 59.795 | 45.833 | 0.00 | 0.00 | 0.00 | 2.34 |
3824 | 8541 | 6.369005 | TCGCTTACTGATCTATAAACGCTAC | 58.631 | 40.000 | 0.00 | 0.00 | 0.00 | 3.58 |
3839 | 8556 | 8.997621 | ATAAACGCTACATTTCTTTACAGAGA | 57.002 | 30.769 | 0.00 | 0.00 | 0.00 | 3.10 |
3855 | 8572 | 5.574891 | ACAGAGAGAGTACATGCTAACTG | 57.425 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
3856 | 8573 | 5.257262 | ACAGAGAGAGTACATGCTAACTGA | 58.743 | 41.667 | 15.65 | 0.00 | 0.00 | 3.41 |
3857 | 8574 | 5.712446 | ACAGAGAGAGTACATGCTAACTGAA | 59.288 | 40.000 | 15.65 | 0.00 | 0.00 | 3.02 |
3858 | 8575 | 6.379703 | ACAGAGAGAGTACATGCTAACTGAAT | 59.620 | 38.462 | 15.65 | 0.00 | 0.00 | 2.57 |
3859 | 8576 | 7.093552 | ACAGAGAGAGTACATGCTAACTGAATT | 60.094 | 37.037 | 15.65 | 0.00 | 0.00 | 2.17 |
3860 | 8577 | 7.434897 | CAGAGAGAGTACATGCTAACTGAATTC | 59.565 | 40.741 | 0.00 | 0.00 | 0.00 | 2.17 |
3861 | 8578 | 6.269315 | AGAGAGTACATGCTAACTGAATTCG | 58.731 | 40.000 | 0.04 | 0.00 | 0.00 | 3.34 |
3862 | 8579 | 6.095580 | AGAGAGTACATGCTAACTGAATTCGA | 59.904 | 38.462 | 0.04 | 0.00 | 0.00 | 3.71 |
3863 | 8580 | 6.269315 | AGAGTACATGCTAACTGAATTCGAG | 58.731 | 40.000 | 0.04 | 2.47 | 0.00 | 4.04 |
3864 | 8581 | 5.967088 | AGTACATGCTAACTGAATTCGAGT | 58.033 | 37.500 | 0.04 | 3.09 | 0.00 | 4.18 |
3865 | 8582 | 7.067129 | AGAGTACATGCTAACTGAATTCGAGTA | 59.933 | 37.037 | 9.88 | 1.72 | 0.00 | 2.59 |
3866 | 8583 | 7.197017 | AGTACATGCTAACTGAATTCGAGTAG | 58.803 | 38.462 | 9.88 | 7.53 | 0.00 | 2.57 |
3867 | 8584 | 6.208988 | ACATGCTAACTGAATTCGAGTAGA | 57.791 | 37.500 | 9.88 | 3.24 | 0.00 | 2.59 |
3868 | 8585 | 6.037098 | ACATGCTAACTGAATTCGAGTAGAC | 58.963 | 40.000 | 9.88 | 4.93 | 0.00 | 2.59 |
3869 | 8586 | 4.659088 | TGCTAACTGAATTCGAGTAGACG | 58.341 | 43.478 | 9.88 | 0.00 | 0.00 | 4.18 |
3870 | 8587 | 4.155462 | TGCTAACTGAATTCGAGTAGACGT | 59.845 | 41.667 | 9.88 | 0.00 | 34.70 | 4.34 |
3871 | 8588 | 4.496183 | GCTAACTGAATTCGAGTAGACGTG | 59.504 | 45.833 | 0.00 | 0.00 | 34.70 | 4.49 |
3872 | 8589 | 3.489180 | ACTGAATTCGAGTAGACGTGG | 57.511 | 47.619 | 0.00 | 0.00 | 34.70 | 4.94 |
3873 | 8590 | 3.079578 | ACTGAATTCGAGTAGACGTGGA | 58.920 | 45.455 | 0.00 | 0.00 | 34.70 | 4.02 |
3874 | 8591 | 3.504906 | ACTGAATTCGAGTAGACGTGGAA | 59.495 | 43.478 | 0.00 | 0.00 | 34.70 | 3.53 |
3875 | 8592 | 4.158025 | ACTGAATTCGAGTAGACGTGGAAT | 59.842 | 41.667 | 0.00 | 0.00 | 34.70 | 3.01 |
3876 | 8593 | 5.356190 | ACTGAATTCGAGTAGACGTGGAATA | 59.644 | 40.000 | 0.00 | 0.00 | 34.70 | 1.75 |
3877 | 8594 | 6.127814 | ACTGAATTCGAGTAGACGTGGAATAA | 60.128 | 38.462 | 0.00 | 0.00 | 34.70 | 1.40 |
3878 | 8595 | 6.623486 | TGAATTCGAGTAGACGTGGAATAAA | 58.377 | 36.000 | 0.00 | 0.00 | 34.70 | 1.40 |
3879 | 8596 | 7.262772 | TGAATTCGAGTAGACGTGGAATAAAT | 58.737 | 34.615 | 0.00 | 0.00 | 34.70 | 1.40 |
3880 | 8597 | 7.762615 | TGAATTCGAGTAGACGTGGAATAAATT | 59.237 | 33.333 | 0.00 | 0.00 | 34.70 | 1.82 |
3881 | 8598 | 8.488651 | AATTCGAGTAGACGTGGAATAAATTT | 57.511 | 30.769 | 0.00 | 0.00 | 34.70 | 1.82 |
3882 | 8599 | 9.590451 | AATTCGAGTAGACGTGGAATAAATTTA | 57.410 | 29.630 | 0.00 | 0.00 | 34.70 | 1.40 |
3883 | 8600 | 7.975866 | TCGAGTAGACGTGGAATAAATTTAC | 57.024 | 36.000 | 0.00 | 0.00 | 34.70 | 2.01 |
3884 | 8601 | 7.537715 | TCGAGTAGACGTGGAATAAATTTACA | 58.462 | 34.615 | 0.00 | 0.00 | 34.70 | 2.41 |
3951 | 8668 | 7.786178 | AGTGTTTCTTCCCTTAAATTTTTGC | 57.214 | 32.000 | 0.00 | 0.00 | 0.00 | 3.68 |
3952 | 8669 | 6.478673 | AGTGTTTCTTCCCTTAAATTTTTGCG | 59.521 | 34.615 | 0.00 | 0.00 | 0.00 | 4.85 |
3953 | 8670 | 5.755861 | TGTTTCTTCCCTTAAATTTTTGCGG | 59.244 | 36.000 | 0.00 | 0.00 | 0.00 | 5.69 |
3954 | 8671 | 3.920446 | TCTTCCCTTAAATTTTTGCGGC | 58.080 | 40.909 | 0.00 | 0.00 | 0.00 | 6.53 |
3959 | 8677 | 3.445805 | CCCTTAAATTTTTGCGGCCTAGA | 59.554 | 43.478 | 0.00 | 0.00 | 0.00 | 2.43 |
3971 | 8689 | 1.676014 | CGGCCTAGAAACCACCTGAAG | 60.676 | 57.143 | 0.00 | 0.00 | 0.00 | 3.02 |
4018 | 8736 | 4.048470 | GAACACAGCCCCCTCCCC | 62.048 | 72.222 | 0.00 | 0.00 | 0.00 | 4.81 |
4046 | 8764 | 1.800315 | CGCCGTCTCGTCGAAATGT | 60.800 | 57.895 | 0.00 | 0.00 | 0.00 | 2.71 |
4057 | 8775 | 2.595655 | GAAATGTAGCCGCCCCCT | 59.404 | 61.111 | 0.00 | 0.00 | 0.00 | 4.79 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
23 | 24 | 2.474816 | GGCATCTGATACGTCTCCAAC | 58.525 | 52.381 | 0.00 | 0.00 | 0.00 | 3.77 |
24 | 25 | 1.067060 | CGGCATCTGATACGTCTCCAA | 59.933 | 52.381 | 0.00 | 0.00 | 0.00 | 3.53 |
25 | 26 | 0.668535 | CGGCATCTGATACGTCTCCA | 59.331 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
26 | 27 | 0.039074 | CCGGCATCTGATACGTCTCC | 60.039 | 60.000 | 0.00 | 0.00 | 0.00 | 3.71 |
27 | 28 | 0.664767 | GCCGGCATCTGATACGTCTC | 60.665 | 60.000 | 24.80 | 0.00 | 0.00 | 3.36 |
28 | 29 | 1.364171 | GCCGGCATCTGATACGTCT | 59.636 | 57.895 | 24.80 | 0.00 | 0.00 | 4.18 |
29 | 30 | 1.664965 | GGCCGGCATCTGATACGTC | 60.665 | 63.158 | 30.85 | 1.22 | 0.00 | 4.34 |
30 | 31 | 2.421739 | GGCCGGCATCTGATACGT | 59.578 | 61.111 | 30.85 | 0.00 | 0.00 | 3.57 |
31 | 32 | 2.734723 | CGGCCGGCATCTGATACG | 60.735 | 66.667 | 30.85 | 16.19 | 0.00 | 3.06 |
32 | 33 | 2.357517 | CCGGCCGGCATCTGATAC | 60.358 | 66.667 | 34.96 | 6.91 | 0.00 | 2.24 |
42 | 43 | 1.219522 | CGTCTATTTAAGCCGGCCGG | 61.220 | 60.000 | 40.26 | 40.26 | 38.57 | 6.13 |
43 | 44 | 0.249155 | TCGTCTATTTAAGCCGGCCG | 60.249 | 55.000 | 26.15 | 21.04 | 0.00 | 6.13 |
44 | 45 | 1.202498 | ACTCGTCTATTTAAGCCGGCC | 60.202 | 52.381 | 26.15 | 5.07 | 0.00 | 6.13 |
45 | 46 | 2.220479 | ACTCGTCTATTTAAGCCGGC | 57.780 | 50.000 | 21.89 | 21.89 | 0.00 | 6.13 |
46 | 47 | 3.308866 | CCAAACTCGTCTATTTAAGCCGG | 59.691 | 47.826 | 0.00 | 0.00 | 0.00 | 6.13 |
47 | 48 | 3.242316 | GCCAAACTCGTCTATTTAAGCCG | 60.242 | 47.826 | 0.00 | 0.00 | 0.00 | 5.52 |
48 | 49 | 3.939592 | AGCCAAACTCGTCTATTTAAGCC | 59.060 | 43.478 | 0.00 | 0.00 | 0.00 | 4.35 |
49 | 50 | 5.447413 | GGAAGCCAAACTCGTCTATTTAAGC | 60.447 | 44.000 | 0.00 | 0.00 | 0.00 | 3.09 |
50 | 51 | 5.220416 | CGGAAGCCAAACTCGTCTATTTAAG | 60.220 | 44.000 | 0.00 | 0.00 | 0.00 | 1.85 |
51 | 52 | 4.628333 | CGGAAGCCAAACTCGTCTATTTAA | 59.372 | 41.667 | 0.00 | 0.00 | 0.00 | 1.52 |
52 | 53 | 4.178540 | CGGAAGCCAAACTCGTCTATTTA | 58.821 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
53 | 54 | 3.000727 | CGGAAGCCAAACTCGTCTATTT | 58.999 | 45.455 | 0.00 | 0.00 | 0.00 | 1.40 |
54 | 55 | 2.618053 | CGGAAGCCAAACTCGTCTATT | 58.382 | 47.619 | 0.00 | 0.00 | 0.00 | 1.73 |
55 | 56 | 1.134788 | CCGGAAGCCAAACTCGTCTAT | 60.135 | 52.381 | 0.00 | 0.00 | 0.00 | 1.98 |
56 | 57 | 0.245539 | CCGGAAGCCAAACTCGTCTA | 59.754 | 55.000 | 0.00 | 0.00 | 0.00 | 2.59 |
57 | 58 | 1.004918 | CCGGAAGCCAAACTCGTCT | 60.005 | 57.895 | 0.00 | 0.00 | 0.00 | 4.18 |
58 | 59 | 2.677979 | GCCGGAAGCCAAACTCGTC | 61.678 | 63.158 | 5.05 | 0.00 | 34.35 | 4.20 |
59 | 60 | 2.668550 | GCCGGAAGCCAAACTCGT | 60.669 | 61.111 | 5.05 | 0.00 | 34.35 | 4.18 |
60 | 61 | 3.788766 | CGCCGGAAGCCAAACTCG | 61.789 | 66.667 | 5.05 | 0.00 | 38.78 | 4.18 |
61 | 62 | 3.431725 | CCGCCGGAAGCCAAACTC | 61.432 | 66.667 | 5.05 | 0.00 | 38.78 | 3.01 |
85 | 86 | 3.119096 | GAAACCAGACGCCGCTCC | 61.119 | 66.667 | 0.00 | 0.00 | 0.00 | 4.70 |
86 | 87 | 3.119096 | GGAAACCAGACGCCGCTC | 61.119 | 66.667 | 0.00 | 0.00 | 0.00 | 5.03 |
92 | 93 | 4.367023 | TCGCCCGGAAACCAGACG | 62.367 | 66.667 | 0.73 | 0.00 | 0.00 | 4.18 |
93 | 94 | 2.434359 | CTCGCCCGGAAACCAGAC | 60.434 | 66.667 | 0.73 | 0.00 | 0.00 | 3.51 |
94 | 95 | 4.388499 | GCTCGCCCGGAAACCAGA | 62.388 | 66.667 | 0.73 | 0.00 | 0.00 | 3.86 |
112 | 113 | 0.314302 | GACGATGAGGTCCCATACGG | 59.686 | 60.000 | 0.00 | 0.00 | 0.00 | 4.02 |
113 | 114 | 0.040336 | CGACGATGAGGTCCCATACG | 60.040 | 60.000 | 0.00 | 0.00 | 33.30 | 3.06 |
114 | 115 | 0.314302 | CCGACGATGAGGTCCCATAC | 59.686 | 60.000 | 0.00 | 0.00 | 33.30 | 2.39 |
115 | 116 | 0.106369 | ACCGACGATGAGGTCCCATA | 60.106 | 55.000 | 0.00 | 0.00 | 35.50 | 2.74 |
116 | 117 | 1.381327 | ACCGACGATGAGGTCCCAT | 60.381 | 57.895 | 0.00 | 0.00 | 35.50 | 4.00 |
117 | 118 | 2.036731 | ACCGACGATGAGGTCCCA | 59.963 | 61.111 | 0.00 | 0.00 | 35.50 | 4.37 |
121 | 122 | 1.319541 | CATAGGACCGACGATGAGGT | 58.680 | 55.000 | 0.00 | 0.00 | 44.64 | 3.85 |
122 | 123 | 1.001268 | CACATAGGACCGACGATGAGG | 60.001 | 57.143 | 0.00 | 0.00 | 0.00 | 3.86 |
123 | 124 | 1.001268 | CCACATAGGACCGACGATGAG | 60.001 | 57.143 | 0.00 | 0.00 | 41.22 | 2.90 |
124 | 125 | 1.029681 | CCACATAGGACCGACGATGA | 58.970 | 55.000 | 0.00 | 0.00 | 41.22 | 2.92 |
125 | 126 | 0.597637 | GCCACATAGGACCGACGATG | 60.598 | 60.000 | 0.00 | 0.00 | 41.22 | 3.84 |
126 | 127 | 1.740285 | GCCACATAGGACCGACGAT | 59.260 | 57.895 | 0.00 | 0.00 | 41.22 | 3.73 |
127 | 128 | 2.767445 | CGCCACATAGGACCGACGA | 61.767 | 63.158 | 0.00 | 0.00 | 41.22 | 4.20 |
128 | 129 | 2.274232 | TTCGCCACATAGGACCGACG | 62.274 | 60.000 | 0.00 | 0.00 | 41.22 | 5.12 |
129 | 130 | 0.804933 | GTTCGCCACATAGGACCGAC | 60.805 | 60.000 | 0.00 | 0.00 | 41.22 | 4.79 |
130 | 131 | 1.514087 | GTTCGCCACATAGGACCGA | 59.486 | 57.895 | 0.00 | 0.00 | 41.22 | 4.69 |
131 | 132 | 1.876714 | CGTTCGCCACATAGGACCG | 60.877 | 63.158 | 0.00 | 0.00 | 41.22 | 4.79 |
132 | 133 | 2.171725 | GCGTTCGCCACATAGGACC | 61.172 | 63.158 | 5.87 | 0.00 | 41.22 | 4.46 |
133 | 134 | 3.395669 | GCGTTCGCCACATAGGAC | 58.604 | 61.111 | 5.87 | 0.00 | 41.22 | 3.85 |
155 | 156 | 2.048127 | GCGGATATGGAGGCGTCC | 60.048 | 66.667 | 18.69 | 18.69 | 44.24 | 4.79 |
156 | 157 | 2.048127 | GGCGGATATGGAGGCGTC | 60.048 | 66.667 | 0.00 | 0.00 | 0.00 | 5.19 |
157 | 158 | 2.725127 | TAGGGCGGATATGGAGGCGT | 62.725 | 60.000 | 0.00 | 0.00 | 0.00 | 5.68 |
158 | 159 | 1.330655 | ATAGGGCGGATATGGAGGCG | 61.331 | 60.000 | 0.00 | 0.00 | 0.00 | 5.52 |
159 | 160 | 1.789523 | TATAGGGCGGATATGGAGGC | 58.210 | 55.000 | 0.00 | 0.00 | 0.00 | 4.70 |
160 | 161 | 4.444876 | CCAAATATAGGGCGGATATGGAGG | 60.445 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
161 | 162 | 4.444876 | CCCAAATATAGGGCGGATATGGAG | 60.445 | 50.000 | 0.49 | 0.00 | 39.96 | 3.86 |
162 | 163 | 3.458118 | CCCAAATATAGGGCGGATATGGA | 59.542 | 47.826 | 0.49 | 0.00 | 39.96 | 3.41 |
163 | 164 | 3.820557 | CCCAAATATAGGGCGGATATGG | 58.179 | 50.000 | 0.49 | 0.00 | 39.96 | 2.74 |
173 | 174 | 6.124340 | TCATCATATGCAGCCCAAATATAGG | 58.876 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
174 | 175 | 6.827251 | ACTCATCATATGCAGCCCAAATATAG | 59.173 | 38.462 | 0.00 | 0.00 | 0.00 | 1.31 |
175 | 176 | 6.600427 | CACTCATCATATGCAGCCCAAATATA | 59.400 | 38.462 | 0.00 | 0.00 | 0.00 | 0.86 |
176 | 177 | 5.417894 | CACTCATCATATGCAGCCCAAATAT | 59.582 | 40.000 | 0.00 | 0.00 | 0.00 | 1.28 |
177 | 178 | 4.763279 | CACTCATCATATGCAGCCCAAATA | 59.237 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
178 | 179 | 3.572682 | CACTCATCATATGCAGCCCAAAT | 59.427 | 43.478 | 0.00 | 0.00 | 0.00 | 2.32 |
179 | 180 | 2.953648 | CACTCATCATATGCAGCCCAAA | 59.046 | 45.455 | 0.00 | 0.00 | 0.00 | 3.28 |
180 | 181 | 2.578786 | CACTCATCATATGCAGCCCAA | 58.421 | 47.619 | 0.00 | 0.00 | 0.00 | 4.12 |
181 | 182 | 1.816572 | GCACTCATCATATGCAGCCCA | 60.817 | 52.381 | 0.00 | 0.00 | 39.23 | 5.36 |
182 | 183 | 0.879765 | GCACTCATCATATGCAGCCC | 59.120 | 55.000 | 0.00 | 0.00 | 39.23 | 5.19 |
183 | 184 | 0.879765 | GGCACTCATCATATGCAGCC | 59.120 | 55.000 | 0.00 | 1.43 | 41.27 | 4.85 |
184 | 185 | 0.516001 | CGGCACTCATCATATGCAGC | 59.484 | 55.000 | 0.00 | 0.00 | 41.27 | 5.25 |
185 | 186 | 1.154197 | CCGGCACTCATCATATGCAG | 58.846 | 55.000 | 0.00 | 0.00 | 41.27 | 4.41 |
186 | 187 | 0.469494 | ACCGGCACTCATCATATGCA | 59.531 | 50.000 | 0.00 | 0.00 | 41.27 | 3.96 |
187 | 188 | 1.151668 | GACCGGCACTCATCATATGC | 58.848 | 55.000 | 0.00 | 0.00 | 38.68 | 3.14 |
188 | 189 | 2.410939 | CTGACCGGCACTCATCATATG | 58.589 | 52.381 | 0.00 | 0.00 | 0.00 | 1.78 |
189 | 190 | 1.270518 | GCTGACCGGCACTCATCATAT | 60.271 | 52.381 | 0.00 | 0.00 | 0.00 | 1.78 |
190 | 191 | 0.104855 | GCTGACCGGCACTCATCATA | 59.895 | 55.000 | 0.00 | 0.00 | 0.00 | 2.15 |
191 | 192 | 1.153289 | GCTGACCGGCACTCATCAT | 60.153 | 57.895 | 0.00 | 0.00 | 0.00 | 2.45 |
192 | 193 | 2.265739 | GCTGACCGGCACTCATCA | 59.734 | 61.111 | 0.00 | 0.00 | 0.00 | 3.07 |
193 | 194 | 2.512515 | GGCTGACCGGCACTCATC | 60.513 | 66.667 | 0.00 | 0.00 | 38.25 | 2.92 |
194 | 195 | 4.101448 | GGGCTGACCGGCACTCAT | 62.101 | 66.667 | 0.00 | 0.00 | 40.61 | 2.90 |
208 | 209 | 2.685850 | TAGACCTTAAAAGCTCGGGC | 57.314 | 50.000 | 0.00 | 0.00 | 39.06 | 6.13 |
209 | 210 | 7.201705 | CCTTTAAATAGACCTTAAAAGCTCGGG | 60.202 | 40.741 | 0.00 | 0.00 | 30.07 | 5.14 |
210 | 211 | 7.551617 | TCCTTTAAATAGACCTTAAAAGCTCGG | 59.448 | 37.037 | 0.00 | 0.00 | 30.07 | 4.63 |
211 | 212 | 8.388853 | GTCCTTTAAATAGACCTTAAAAGCTCG | 58.611 | 37.037 | 7.10 | 0.00 | 30.07 | 5.03 |
212 | 213 | 8.675504 | GGTCCTTTAAATAGACCTTAAAAGCTC | 58.324 | 37.037 | 21.86 | 1.63 | 45.49 | 4.09 |
213 | 214 | 8.577048 | GGTCCTTTAAATAGACCTTAAAAGCT | 57.423 | 34.615 | 21.86 | 0.00 | 45.49 | 3.74 |
249 | 250 | 6.594159 | CCGGTCACTGACTAGTCATAATTTTT | 59.406 | 38.462 | 25.35 | 2.40 | 39.13 | 1.94 |
250 | 251 | 6.106673 | CCGGTCACTGACTAGTCATAATTTT | 58.893 | 40.000 | 25.35 | 4.06 | 39.13 | 1.82 |
251 | 252 | 5.395324 | CCCGGTCACTGACTAGTCATAATTT | 60.395 | 44.000 | 25.35 | 5.75 | 39.13 | 1.82 |
252 | 253 | 4.099573 | CCCGGTCACTGACTAGTCATAATT | 59.900 | 45.833 | 25.35 | 8.15 | 39.13 | 1.40 |
253 | 254 | 3.637229 | CCCGGTCACTGACTAGTCATAAT | 59.363 | 47.826 | 25.35 | 11.74 | 39.13 | 1.28 |
254 | 255 | 3.021695 | CCCGGTCACTGACTAGTCATAA | 58.978 | 50.000 | 25.35 | 11.36 | 39.13 | 1.90 |
255 | 256 | 2.651455 | CCCGGTCACTGACTAGTCATA | 58.349 | 52.381 | 25.35 | 11.70 | 39.13 | 2.15 |
256 | 257 | 1.475403 | CCCGGTCACTGACTAGTCAT | 58.525 | 55.000 | 25.35 | 13.03 | 39.13 | 3.06 |
257 | 258 | 1.248785 | GCCCGGTCACTGACTAGTCA | 61.249 | 60.000 | 23.80 | 23.80 | 34.07 | 3.41 |
258 | 259 | 1.248785 | TGCCCGGTCACTGACTAGTC | 61.249 | 60.000 | 16.32 | 16.32 | 34.07 | 2.59 |
259 | 260 | 1.228769 | TGCCCGGTCACTGACTAGT | 60.229 | 57.895 | 9.08 | 0.00 | 37.75 | 2.57 |
260 | 261 | 1.513158 | CTGCCCGGTCACTGACTAG | 59.487 | 63.158 | 9.08 | 4.09 | 32.47 | 2.57 |
261 | 262 | 2.646175 | GCTGCCCGGTCACTGACTA | 61.646 | 63.158 | 9.08 | 0.00 | 32.47 | 2.59 |
262 | 263 | 4.008933 | GCTGCCCGGTCACTGACT | 62.009 | 66.667 | 9.08 | 0.00 | 32.47 | 3.41 |
279 | 280 | 4.280494 | CTCATACGTCCGGGCGGG | 62.280 | 72.222 | 34.31 | 21.42 | 35.98 | 6.13 |
280 | 281 | 3.214123 | TCTCATACGTCCGGGCGG | 61.214 | 66.667 | 34.31 | 15.69 | 35.98 | 6.13 |
281 | 282 | 2.025727 | GTCTCATACGTCCGGGCG | 59.974 | 66.667 | 29.88 | 29.88 | 37.94 | 6.13 |
282 | 283 | 2.025727 | CGTCTCATACGTCCGGGC | 59.974 | 66.667 | 0.00 | 0.00 | 46.72 | 6.13 |
290 | 291 | 1.517276 | CGCGTCAAATCCGTCTCATAC | 59.483 | 52.381 | 0.00 | 0.00 | 0.00 | 2.39 |
291 | 292 | 1.835121 | CGCGTCAAATCCGTCTCATA | 58.165 | 50.000 | 0.00 | 0.00 | 0.00 | 2.15 |
292 | 293 | 1.421410 | GCGCGTCAAATCCGTCTCAT | 61.421 | 55.000 | 8.43 | 0.00 | 0.00 | 2.90 |
293 | 294 | 2.092291 | GCGCGTCAAATCCGTCTCA | 61.092 | 57.895 | 8.43 | 0.00 | 0.00 | 3.27 |
294 | 295 | 2.695646 | GCGCGTCAAATCCGTCTC | 59.304 | 61.111 | 8.43 | 0.00 | 0.00 | 3.36 |
295 | 296 | 2.813908 | GGCGCGTCAAATCCGTCT | 60.814 | 61.111 | 5.47 | 0.00 | 0.00 | 4.18 |
296 | 297 | 3.861263 | GGGCGCGTCAAATCCGTC | 61.861 | 66.667 | 14.93 | 0.00 | 0.00 | 4.79 |
297 | 298 | 4.388499 | AGGGCGCGTCAAATCCGT | 62.388 | 61.111 | 14.93 | 0.00 | 0.00 | 4.69 |
298 | 299 | 3.864686 | CAGGGCGCGTCAAATCCG | 61.865 | 66.667 | 14.93 | 0.00 | 0.00 | 4.18 |
299 | 300 | 4.179579 | GCAGGGCGCGTCAAATCC | 62.180 | 66.667 | 14.93 | 0.27 | 0.00 | 3.01 |
308 | 309 | 3.275338 | GCATCTACAGCAGGGCGC | 61.275 | 66.667 | 0.00 | 0.00 | 42.91 | 6.53 |
309 | 310 | 1.593750 | GAGCATCTACAGCAGGGCG | 60.594 | 63.158 | 0.00 | 0.00 | 32.32 | 6.13 |
310 | 311 | 4.453093 | GAGCATCTACAGCAGGGC | 57.547 | 61.111 | 0.00 | 0.00 | 0.00 | 5.19 |
321 | 322 | 5.419542 | TGTGTTATGTGGAGTTAGAGCATC | 58.580 | 41.667 | 0.00 | 0.00 | 0.00 | 3.91 |
322 | 323 | 5.420725 | TGTGTTATGTGGAGTTAGAGCAT | 57.579 | 39.130 | 0.00 | 0.00 | 0.00 | 3.79 |
323 | 324 | 4.882842 | TGTGTTATGTGGAGTTAGAGCA | 57.117 | 40.909 | 0.00 | 0.00 | 0.00 | 4.26 |
324 | 325 | 6.743575 | AATTGTGTTATGTGGAGTTAGAGC | 57.256 | 37.500 | 0.00 | 0.00 | 0.00 | 4.09 |
325 | 326 | 8.771920 | TGTAATTGTGTTATGTGGAGTTAGAG | 57.228 | 34.615 | 0.00 | 0.00 | 0.00 | 2.43 |
326 | 327 | 9.562408 | TTTGTAATTGTGTTATGTGGAGTTAGA | 57.438 | 29.630 | 0.00 | 0.00 | 0.00 | 2.10 |
328 | 329 | 9.953697 | GTTTTGTAATTGTGTTATGTGGAGTTA | 57.046 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
329 | 330 | 7.646130 | CGTTTTGTAATTGTGTTATGTGGAGTT | 59.354 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
330 | 331 | 7.012515 | TCGTTTTGTAATTGTGTTATGTGGAGT | 59.987 | 33.333 | 0.00 | 0.00 | 0.00 | 3.85 |
331 | 332 | 7.356540 | TCGTTTTGTAATTGTGTTATGTGGAG | 58.643 | 34.615 | 0.00 | 0.00 | 0.00 | 3.86 |
332 | 333 | 7.260558 | TCGTTTTGTAATTGTGTTATGTGGA | 57.739 | 32.000 | 0.00 | 0.00 | 0.00 | 4.02 |
333 | 334 | 7.805542 | TCATCGTTTTGTAATTGTGTTATGTGG | 59.194 | 33.333 | 0.00 | 0.00 | 0.00 | 4.17 |
334 | 335 | 8.720909 | TCATCGTTTTGTAATTGTGTTATGTG | 57.279 | 30.769 | 0.00 | 0.00 | 0.00 | 3.21 |
335 | 336 | 9.737427 | TTTCATCGTTTTGTAATTGTGTTATGT | 57.263 | 25.926 | 0.00 | 0.00 | 0.00 | 2.29 |
336 | 337 | 9.987901 | GTTTCATCGTTTTGTAATTGTGTTATG | 57.012 | 29.630 | 0.00 | 0.00 | 0.00 | 1.90 |
337 | 338 | 8.897809 | CGTTTCATCGTTTTGTAATTGTGTTAT | 58.102 | 29.630 | 0.00 | 0.00 | 0.00 | 1.89 |
338 | 339 | 8.121086 | TCGTTTCATCGTTTTGTAATTGTGTTA | 58.879 | 29.630 | 0.00 | 0.00 | 0.00 | 2.41 |
339 | 340 | 6.967767 | TCGTTTCATCGTTTTGTAATTGTGTT | 59.032 | 30.769 | 0.00 | 0.00 | 0.00 | 3.32 |
340 | 341 | 6.412653 | GTCGTTTCATCGTTTTGTAATTGTGT | 59.587 | 34.615 | 0.00 | 0.00 | 0.00 | 3.72 |
367 | 368 | 5.710513 | TGTCAACTCTCAAATTTCCCATG | 57.289 | 39.130 | 0.00 | 0.00 | 0.00 | 3.66 |
368 | 369 | 6.494491 | TGAATGTCAACTCTCAAATTTCCCAT | 59.506 | 34.615 | 0.00 | 0.00 | 0.00 | 4.00 |
369 | 370 | 5.832595 | TGAATGTCAACTCTCAAATTTCCCA | 59.167 | 36.000 | 0.00 | 0.00 | 0.00 | 4.37 |
370 | 371 | 6.331369 | TGAATGTCAACTCTCAAATTTCCC | 57.669 | 37.500 | 0.00 | 0.00 | 0.00 | 3.97 |
371 | 372 | 6.364435 | GCTTGAATGTCAACTCTCAAATTTCC | 59.636 | 38.462 | 0.00 | 0.00 | 32.21 | 3.13 |
372 | 373 | 6.919662 | TGCTTGAATGTCAACTCTCAAATTTC | 59.080 | 34.615 | 0.00 | 0.00 | 32.21 | 2.17 |
373 | 374 | 6.808829 | TGCTTGAATGTCAACTCTCAAATTT | 58.191 | 32.000 | 0.00 | 0.00 | 32.21 | 1.82 |
374 | 375 | 6.395426 | TGCTTGAATGTCAACTCTCAAATT | 57.605 | 33.333 | 0.00 | 0.00 | 32.21 | 1.82 |
375 | 376 | 5.048224 | CCTGCTTGAATGTCAACTCTCAAAT | 60.048 | 40.000 | 0.00 | 0.00 | 32.21 | 2.32 |
376 | 377 | 4.276678 | CCTGCTTGAATGTCAACTCTCAAA | 59.723 | 41.667 | 0.00 | 0.00 | 32.21 | 2.69 |
383 | 384 | 1.200948 | GCCTCCTGCTTGAATGTCAAC | 59.799 | 52.381 | 0.00 | 0.00 | 36.87 | 3.18 |
394 | 395 | 1.065126 | GGTTACTGAATGCCTCCTGCT | 60.065 | 52.381 | 0.00 | 0.00 | 42.00 | 4.24 |
906 | 977 | 3.563479 | GGGTTCTTGATTTCTTGGGGCTA | 60.563 | 47.826 | 0.00 | 0.00 | 0.00 | 3.93 |
919 | 997 | 2.522367 | GGGGACGGTGGGTTCTTGA | 61.522 | 63.158 | 0.00 | 0.00 | 0.00 | 3.02 |
953 | 1031 | 2.363147 | GTGGAGAGAGAGGCGGGT | 60.363 | 66.667 | 0.00 | 0.00 | 0.00 | 5.28 |
986 | 1083 | 2.765807 | CCATCGGAGGGCAGAGGT | 60.766 | 66.667 | 0.00 | 0.00 | 0.00 | 3.85 |
1345 | 1492 | 4.452733 | GTTGGCGCGGAGGTAGCT | 62.453 | 66.667 | 8.83 | 0.00 | 0.00 | 3.32 |
1546 | 2175 | 9.952188 | GCTAATACTCTGAATTTTCAATAACCC | 57.048 | 33.333 | 0.00 | 0.00 | 36.64 | 4.11 |
1547 | 2176 | 9.651718 | CGCTAATACTCTGAATTTTCAATAACC | 57.348 | 33.333 | 0.00 | 0.00 | 36.64 | 2.85 |
1550 | 2179 | 9.042008 | GGTCGCTAATACTCTGAATTTTCAATA | 57.958 | 33.333 | 0.00 | 0.00 | 36.64 | 1.90 |
1889 | 2753 | 1.473278 | AGGAAGACGACGATCCAGAAC | 59.527 | 52.381 | 17.00 | 0.00 | 35.62 | 3.01 |
1970 | 2896 | 7.702348 | GTCCATAACAAATTCAATCAAGGCTAC | 59.298 | 37.037 | 0.00 | 0.00 | 0.00 | 3.58 |
1972 | 2898 | 6.438425 | AGTCCATAACAAATTCAATCAAGGCT | 59.562 | 34.615 | 0.00 | 0.00 | 0.00 | 4.58 |
1973 | 2899 | 6.633856 | AGTCCATAACAAATTCAATCAAGGC | 58.366 | 36.000 | 0.00 | 0.00 | 0.00 | 4.35 |
1977 | 2903 | 9.585099 | GCAAATAGTCCATAACAAATTCAATCA | 57.415 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
1979 | 2905 | 9.590451 | CAGCAAATAGTCCATAACAAATTCAAT | 57.410 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
1988 | 2914 | 5.048713 | GGCCATACAGCAAATAGTCCATAAC | 60.049 | 44.000 | 0.00 | 0.00 | 0.00 | 1.89 |
1989 | 2915 | 5.070001 | GGCCATACAGCAAATAGTCCATAA | 58.930 | 41.667 | 0.00 | 0.00 | 0.00 | 1.90 |
1990 | 2916 | 4.103943 | TGGCCATACAGCAAATAGTCCATA | 59.896 | 41.667 | 0.00 | 0.00 | 0.00 | 2.74 |
1991 | 2917 | 3.117550 | TGGCCATACAGCAAATAGTCCAT | 60.118 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
1992 | 2918 | 2.240921 | TGGCCATACAGCAAATAGTCCA | 59.759 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
1993 | 2919 | 2.930950 | TGGCCATACAGCAAATAGTCC | 58.069 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
1994 | 2920 | 4.136796 | TCATGGCCATACAGCAAATAGTC | 58.863 | 43.478 | 20.30 | 0.00 | 0.00 | 2.59 |
1995 | 2921 | 4.169059 | TCATGGCCATACAGCAAATAGT | 57.831 | 40.909 | 20.30 | 0.00 | 0.00 | 2.12 |
1996 | 2922 | 5.008331 | AGATCATGGCCATACAGCAAATAG | 58.992 | 41.667 | 20.30 | 1.51 | 0.00 | 1.73 |
1997 | 2923 | 4.989277 | AGATCATGGCCATACAGCAAATA | 58.011 | 39.130 | 20.30 | 0.00 | 0.00 | 1.40 |
1998 | 2924 | 3.840991 | AGATCATGGCCATACAGCAAAT | 58.159 | 40.909 | 20.30 | 3.49 | 0.00 | 2.32 |
1999 | 2925 | 3.301794 | AGATCATGGCCATACAGCAAA | 57.698 | 42.857 | 20.30 | 0.00 | 0.00 | 3.68 |
2000 | 2926 | 3.301794 | AAGATCATGGCCATACAGCAA | 57.698 | 42.857 | 20.30 | 0.07 | 0.00 | 3.91 |
2001 | 2927 | 2.953648 | CAAAGATCATGGCCATACAGCA | 59.046 | 45.455 | 20.30 | 0.06 | 0.00 | 4.41 |
2002 | 2928 | 2.288030 | GCAAAGATCATGGCCATACAGC | 60.288 | 50.000 | 20.30 | 11.09 | 0.00 | 4.40 |
2003 | 2929 | 3.220110 | AGCAAAGATCATGGCCATACAG | 58.780 | 45.455 | 20.30 | 6.56 | 0.00 | 2.74 |
2004 | 2930 | 3.301794 | AGCAAAGATCATGGCCATACA | 57.698 | 42.857 | 20.30 | 8.64 | 0.00 | 2.29 |
2005 | 2931 | 5.336213 | CCAATAGCAAAGATCATGGCCATAC | 60.336 | 44.000 | 20.30 | 12.94 | 0.00 | 2.39 |
2006 | 2932 | 4.768448 | CCAATAGCAAAGATCATGGCCATA | 59.232 | 41.667 | 20.30 | 7.65 | 0.00 | 2.74 |
2007 | 2933 | 3.576982 | CCAATAGCAAAGATCATGGCCAT | 59.423 | 43.478 | 14.09 | 14.09 | 0.00 | 4.40 |
2008 | 2934 | 2.960384 | CCAATAGCAAAGATCATGGCCA | 59.040 | 45.455 | 8.56 | 8.56 | 0.00 | 5.36 |
2009 | 2935 | 2.298163 | CCCAATAGCAAAGATCATGGCC | 59.702 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
2010 | 2936 | 2.298163 | CCCCAATAGCAAAGATCATGGC | 59.702 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2011 | 2937 | 2.895404 | CCCCCAATAGCAAAGATCATGG | 59.105 | 50.000 | 0.00 | 0.00 | 0.00 | 3.66 |
2012 | 2938 | 3.319972 | CACCCCCAATAGCAAAGATCATG | 59.680 | 47.826 | 0.00 | 0.00 | 0.00 | 3.07 |
2013 | 2939 | 3.569491 | CACCCCCAATAGCAAAGATCAT | 58.431 | 45.455 | 0.00 | 0.00 | 0.00 | 2.45 |
2014 | 2940 | 2.949963 | GCACCCCCAATAGCAAAGATCA | 60.950 | 50.000 | 0.00 | 0.00 | 0.00 | 2.92 |
2015 | 2941 | 1.683385 | GCACCCCCAATAGCAAAGATC | 59.317 | 52.381 | 0.00 | 0.00 | 0.00 | 2.75 |
2016 | 2942 | 1.288932 | AGCACCCCCAATAGCAAAGAT | 59.711 | 47.619 | 0.00 | 0.00 | 0.00 | 2.40 |
2017 | 2943 | 0.704076 | AGCACCCCCAATAGCAAAGA | 59.296 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
2018 | 2944 | 2.435372 | TAGCACCCCCAATAGCAAAG | 57.565 | 50.000 | 0.00 | 0.00 | 0.00 | 2.77 |
2019 | 2945 | 2.909504 | TTAGCACCCCCAATAGCAAA | 57.090 | 45.000 | 0.00 | 0.00 | 0.00 | 3.68 |
2020 | 2946 | 2.513738 | AGATTAGCACCCCCAATAGCAA | 59.486 | 45.455 | 0.00 | 0.00 | 0.00 | 3.91 |
2021 | 2947 | 2.135189 | AGATTAGCACCCCCAATAGCA | 58.865 | 47.619 | 0.00 | 0.00 | 0.00 | 3.49 |
2022 | 2948 | 2.508526 | CAGATTAGCACCCCCAATAGC | 58.491 | 52.381 | 0.00 | 0.00 | 0.00 | 2.97 |
2023 | 2949 | 2.107204 | AGCAGATTAGCACCCCCAATAG | 59.893 | 50.000 | 0.00 | 0.00 | 36.85 | 1.73 |
2186 | 4460 | 3.372566 | CCCCAATAACCATCTAGCCACAA | 60.373 | 47.826 | 0.00 | 0.00 | 0.00 | 3.33 |
2217 | 4492 | 4.717991 | TGTGCGTAAACATGCTATCAAAC | 58.282 | 39.130 | 0.00 | 0.00 | 0.00 | 2.93 |
2290 | 4658 | 9.466497 | TGTTAAGGCTGAAAGAGATTAATCAAT | 57.534 | 29.630 | 17.56 | 2.59 | 34.07 | 2.57 |
2445 | 6887 | 8.425577 | AAATAACAAGACCGAGAATACATCTG | 57.574 | 34.615 | 0.00 | 0.00 | 38.96 | 2.90 |
2739 | 7209 | 5.241506 | ACATGGCATTTACTATTCCCATTCG | 59.758 | 40.000 | 0.00 | 0.00 | 31.08 | 3.34 |
2851 | 7388 | 7.630242 | TTTAGGTTCCATAATTTCTGCTGAG | 57.370 | 36.000 | 0.00 | 0.00 | 0.00 | 3.35 |
2856 | 7393 | 7.410120 | AGCCTTTTAGGTTCCATAATTTCTG | 57.590 | 36.000 | 0.00 | 0.00 | 37.80 | 3.02 |
2857 | 7394 | 8.336987 | ACTAGCCTTTTAGGTTCCATAATTTCT | 58.663 | 33.333 | 0.00 | 0.00 | 37.80 | 2.52 |
2860 | 7397 | 7.639378 | TGACTAGCCTTTTAGGTTCCATAATT | 58.361 | 34.615 | 0.00 | 0.00 | 37.80 | 1.40 |
2861 | 7398 | 7.208064 | TGACTAGCCTTTTAGGTTCCATAAT | 57.792 | 36.000 | 0.00 | 0.00 | 37.80 | 1.28 |
2862 | 7399 | 6.630203 | TGACTAGCCTTTTAGGTTCCATAA | 57.370 | 37.500 | 0.00 | 0.00 | 37.80 | 1.90 |
2863 | 7400 | 6.824958 | ATGACTAGCCTTTTAGGTTCCATA | 57.175 | 37.500 | 0.00 | 0.00 | 37.80 | 2.74 |
2864 | 7401 | 5.717119 | ATGACTAGCCTTTTAGGTTCCAT | 57.283 | 39.130 | 0.00 | 0.00 | 37.80 | 3.41 |
2865 | 7402 | 5.514500 | AATGACTAGCCTTTTAGGTTCCA | 57.486 | 39.130 | 0.00 | 0.00 | 37.80 | 3.53 |
2866 | 7403 | 6.835819 | AAAATGACTAGCCTTTTAGGTTCC | 57.164 | 37.500 | 0.00 | 0.00 | 37.80 | 3.62 |
2869 | 7406 | 9.969001 | TGTTATAAAATGACTAGCCTTTTAGGT | 57.031 | 29.630 | 9.31 | 0.00 | 37.80 | 3.08 |
2874 | 7411 | 9.586435 | GCAAATGTTATAAAATGACTAGCCTTT | 57.414 | 29.630 | 0.00 | 0.00 | 0.00 | 3.11 |
2875 | 7412 | 8.971073 | AGCAAATGTTATAAAATGACTAGCCTT | 58.029 | 29.630 | 0.00 | 0.00 | 0.00 | 4.35 |
2876 | 7413 | 8.408601 | CAGCAAATGTTATAAAATGACTAGCCT | 58.591 | 33.333 | 0.00 | 0.00 | 0.00 | 4.58 |
2877 | 7414 | 7.168135 | GCAGCAAATGTTATAAAATGACTAGCC | 59.832 | 37.037 | 0.00 | 0.00 | 0.00 | 3.93 |
2878 | 7415 | 7.917505 | AGCAGCAAATGTTATAAAATGACTAGC | 59.082 | 33.333 | 0.00 | 0.00 | 0.00 | 3.42 |
2881 | 7418 | 8.960591 | ACTAGCAGCAAATGTTATAAAATGACT | 58.039 | 29.630 | 0.00 | 0.00 | 0.00 | 3.41 |
2890 | 7427 | 9.784531 | ATAATGTCTACTAGCAGCAAATGTTAT | 57.215 | 29.630 | 0.00 | 0.00 | 0.00 | 1.89 |
2911 | 7448 | 7.054124 | TGACTAGCCTTTTAGGTTCCATAATG | 58.946 | 38.462 | 0.00 | 0.00 | 37.80 | 1.90 |
3195 | 7849 | 1.560860 | GCGTCCAGTTCTGCTGTCAC | 61.561 | 60.000 | 0.00 | 0.00 | 43.55 | 3.67 |
3367 | 8029 | 9.287373 | ACTTCATTTTCCATTTATGCAAAATGT | 57.713 | 25.926 | 21.99 | 8.63 | 42.76 | 2.71 |
3390 | 8052 | 2.017049 | GTCACACTGCAAGAACCACTT | 58.983 | 47.619 | 0.00 | 0.00 | 39.70 | 3.16 |
3498 | 8164 | 2.282180 | ATGAAACCGGGCGCAACT | 60.282 | 55.556 | 10.83 | 0.00 | 0.00 | 3.16 |
3657 | 8372 | 1.091771 | AATTCAGGTGCTCGGCATCG | 61.092 | 55.000 | 1.90 | 0.00 | 45.38 | 3.84 |
3770 | 8487 | 1.200483 | CACTCGATCCAACGAATCGG | 58.800 | 55.000 | 7.80 | 0.00 | 41.67 | 4.18 |
3806 | 8523 | 9.601217 | AAAGAAATGTAGCGTTTATAGATCAGT | 57.399 | 29.630 | 0.00 | 0.00 | 0.00 | 3.41 |
3817 | 8534 | 6.688578 | TCTCTCTGTAAAGAAATGTAGCGTT | 58.311 | 36.000 | 0.00 | 0.00 | 0.00 | 4.84 |
3824 | 8541 | 7.763528 | AGCATGTACTCTCTCTGTAAAGAAATG | 59.236 | 37.037 | 0.00 | 0.00 | 0.00 | 2.32 |
3839 | 8556 | 6.127591 | ACTCGAATTCAGTTAGCATGTACTCT | 60.128 | 38.462 | 6.22 | 0.00 | 0.00 | 3.24 |
3855 | 8572 | 7.695869 | ATTTATTCCACGTCTACTCGAATTC | 57.304 | 36.000 | 0.00 | 0.00 | 34.70 | 2.17 |
3856 | 8573 | 8.488651 | AAATTTATTCCACGTCTACTCGAATT | 57.511 | 30.769 | 0.00 | 0.00 | 34.70 | 2.17 |
3857 | 8574 | 9.028185 | GTAAATTTATTCCACGTCTACTCGAAT | 57.972 | 33.333 | 0.31 | 0.00 | 34.70 | 3.34 |
3858 | 8575 | 8.028354 | TGTAAATTTATTCCACGTCTACTCGAA | 58.972 | 33.333 | 0.31 | 0.00 | 34.70 | 3.71 |
3859 | 8576 | 7.537715 | TGTAAATTTATTCCACGTCTACTCGA | 58.462 | 34.615 | 0.31 | 0.00 | 34.70 | 4.04 |
3860 | 8577 | 7.043590 | CCTGTAAATTTATTCCACGTCTACTCG | 60.044 | 40.741 | 0.31 | 0.00 | 0.00 | 4.18 |
3861 | 8578 | 7.977853 | TCCTGTAAATTTATTCCACGTCTACTC | 59.022 | 37.037 | 0.31 | 0.00 | 0.00 | 2.59 |
3862 | 8579 | 7.844009 | TCCTGTAAATTTATTCCACGTCTACT | 58.156 | 34.615 | 0.31 | 0.00 | 0.00 | 2.57 |
3863 | 8580 | 8.658499 | ATCCTGTAAATTTATTCCACGTCTAC | 57.342 | 34.615 | 0.31 | 0.00 | 0.00 | 2.59 |
3864 | 8581 | 7.929785 | GGATCCTGTAAATTTATTCCACGTCTA | 59.070 | 37.037 | 3.84 | 0.00 | 0.00 | 2.59 |
3865 | 8582 | 6.766467 | GGATCCTGTAAATTTATTCCACGTCT | 59.234 | 38.462 | 3.84 | 0.00 | 0.00 | 4.18 |
3866 | 8583 | 6.766467 | AGGATCCTGTAAATTTATTCCACGTC | 59.234 | 38.462 | 15.29 | 0.00 | 0.00 | 4.34 |
3867 | 8584 | 6.542370 | CAGGATCCTGTAAATTTATTCCACGT | 59.458 | 38.462 | 30.55 | 0.00 | 39.10 | 4.49 |
3868 | 8585 | 6.513393 | GCAGGATCCTGTAAATTTATTCCACG | 60.513 | 42.308 | 36.32 | 10.95 | 45.24 | 4.94 |
3869 | 8586 | 6.547510 | AGCAGGATCCTGTAAATTTATTCCAC | 59.452 | 38.462 | 36.32 | 18.12 | 45.24 | 4.02 |
3870 | 8587 | 6.672593 | AGCAGGATCCTGTAAATTTATTCCA | 58.327 | 36.000 | 36.32 | 0.00 | 45.24 | 3.53 |
3871 | 8588 | 8.568794 | GTTAGCAGGATCCTGTAAATTTATTCC | 58.431 | 37.037 | 36.32 | 18.69 | 45.24 | 3.01 |
3872 | 8589 | 9.343539 | AGTTAGCAGGATCCTGTAAATTTATTC | 57.656 | 33.333 | 36.32 | 19.15 | 45.24 | 1.75 |
3873 | 8590 | 9.700831 | AAGTTAGCAGGATCCTGTAAATTTATT | 57.299 | 29.630 | 36.32 | 20.43 | 45.24 | 1.40 |
3874 | 8591 | 9.125026 | CAAGTTAGCAGGATCCTGTAAATTTAT | 57.875 | 33.333 | 36.32 | 17.55 | 45.24 | 1.40 |
3875 | 8592 | 7.556275 | CCAAGTTAGCAGGATCCTGTAAATTTA | 59.444 | 37.037 | 36.32 | 19.07 | 45.24 | 1.40 |
3876 | 8593 | 6.378280 | CCAAGTTAGCAGGATCCTGTAAATTT | 59.622 | 38.462 | 36.32 | 28.13 | 45.24 | 1.82 |
3877 | 8594 | 5.888161 | CCAAGTTAGCAGGATCCTGTAAATT | 59.112 | 40.000 | 36.32 | 30.40 | 45.24 | 1.82 |
3878 | 8595 | 5.440610 | CCAAGTTAGCAGGATCCTGTAAAT | 58.559 | 41.667 | 36.32 | 27.63 | 45.24 | 1.40 |
3879 | 8596 | 4.843728 | CCAAGTTAGCAGGATCCTGTAAA | 58.156 | 43.478 | 36.32 | 27.87 | 45.24 | 2.01 |
3880 | 8597 | 3.370527 | GCCAAGTTAGCAGGATCCTGTAA | 60.371 | 47.826 | 36.32 | 28.46 | 45.24 | 2.41 |
3881 | 8598 | 2.170607 | GCCAAGTTAGCAGGATCCTGTA | 59.829 | 50.000 | 36.32 | 25.30 | 45.24 | 2.74 |
3882 | 8599 | 1.065126 | GCCAAGTTAGCAGGATCCTGT | 60.065 | 52.381 | 36.32 | 26.21 | 45.24 | 4.00 |
3883 | 8600 | 1.673168 | GCCAAGTTAGCAGGATCCTG | 58.327 | 55.000 | 33.73 | 33.73 | 46.15 | 3.86 |
3884 | 8601 | 0.548510 | GGCCAAGTTAGCAGGATCCT | 59.451 | 55.000 | 9.02 | 9.02 | 0.00 | 3.24 |
3951 | 8668 | 0.323629 | TTCAGGTGGTTTCTAGGCCG | 59.676 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
3952 | 8669 | 1.340114 | CCTTCAGGTGGTTTCTAGGCC | 60.340 | 57.143 | 0.00 | 0.00 | 0.00 | 5.19 |
3953 | 8670 | 2.115343 | CCTTCAGGTGGTTTCTAGGC | 57.885 | 55.000 | 0.00 | 0.00 | 0.00 | 3.93 |
4041 | 8759 | 2.275418 | CAGGGGGCGGCTACATTT | 59.725 | 61.111 | 9.56 | 0.00 | 0.00 | 2.32 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.