Multiple sequence alignment - TraesCS7D01G116100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G116100 chr7D 100.000 7930 0 0 519 8448 71342666 71350595 0.000000e+00 14645.0
1 TraesCS7D01G116100 chr7D 90.450 2932 222 30 1157 4084 71353690 71356567 0.000000e+00 3810.0
2 TraesCS7D01G116100 chr7D 87.952 3237 340 35 1157 4367 71217855 71214643 0.000000e+00 3771.0
3 TraesCS7D01G116100 chr7D 87.261 3242 350 39 1157 4367 71320653 71317444 0.000000e+00 3640.0
4 TraesCS7D01G116100 chr7D 88.849 1103 99 17 6371 7457 71545304 71544210 0.000000e+00 1334.0
5 TraesCS7D01G116100 chr7D 85.728 1044 113 23 5263 6288 71316426 71315401 0.000000e+00 1070.0
6 TraesCS7D01G116100 chr7D 85.687 1041 112 30 5272 6288 71213680 71212653 0.000000e+00 1062.0
7 TraesCS7D01G116100 chr7D 90.476 735 62 5 5313 6039 71546057 71545323 0.000000e+00 963.0
8 TraesCS7D01G116100 chr7D 100.000 377 0 0 1 377 71342148 71342524 0.000000e+00 697.0
9 TraesCS7D01G116100 chr7D 87.543 586 43 9 4693 5248 71362076 71362661 0.000000e+00 651.0
10 TraesCS7D01G116100 chr7D 99.367 158 1 0 1000 1157 71343304 71343461 3.860000e-73 287.0
11 TraesCS7D01G116100 chr7D 85.926 270 27 9 6510 6773 69937702 69937438 2.320000e-70 278.0
12 TraesCS7D01G116100 chr7D 83.607 305 36 8 856 1157 71353549 71353842 3.000000e-69 274.0
13 TraesCS7D01G116100 chr7D 81.908 304 35 13 856 1157 71320788 71320503 1.100000e-58 239.0
14 TraesCS7D01G116100 chr7D 80.592 304 38 13 856 1157 71217991 71217707 1.850000e-51 215.0
15 TraesCS7D01G116100 chr7D 81.959 194 18 8 685 873 71320915 71320734 1.900000e-31 148.0
16 TraesCS7D01G116100 chr2B 94.926 5420 188 33 1158 6513 723405257 723399861 0.000000e+00 8405.0
17 TraesCS7D01G116100 chr2B 89.838 3218 252 41 1157 4368 723396898 723393750 0.000000e+00 4061.0
18 TraesCS7D01G116100 chr2B 96.100 1000 37 2 6510 7507 723399758 723398759 0.000000e+00 1629.0
19 TraesCS7D01G116100 chr2B 90.969 609 40 12 554 1157 723405702 723405104 0.000000e+00 806.0
20 TraesCS7D01G116100 chr2B 87.838 592 39 11 4693 5251 723393755 723393164 0.000000e+00 664.0
21 TraesCS7D01G116100 chr2B 83.290 383 32 25 1 377 723406804 723406448 2.940000e-84 324.0
22 TraesCS7D01G116100 chr2B 91.189 227 8 3 7925 8148 723398758 723398541 1.780000e-76 298.0
23 TraesCS7D01G116100 chr2B 83.984 256 30 6 904 1157 723396994 723396748 1.420000e-57 235.0
24 TraesCS7D01G116100 chr2B 97.727 88 2 0 8361 8448 723398544 723398457 1.470000e-32 152.0
25 TraesCS7D01G116100 chr2B 97.059 34 1 0 4666 4699 723402003 723402036 3.290000e-04 58.4
26 TraesCS7D01G116100 chr7B 93.724 5242 219 52 1157 6316 13881332 13876119 0.000000e+00 7757.0
27 TraesCS7D01G116100 chr7B 94.373 1866 62 19 6313 8147 13874044 13872191 0.000000e+00 2824.0
28 TraesCS7D01G116100 chr7B 91.846 1533 115 5 1157 2688 13870718 13869195 0.000000e+00 2130.0
29 TraesCS7D01G116100 chr7B 88.365 1633 172 12 2746 4367 13117193 13115568 0.000000e+00 1947.0
30 TraesCS7D01G116100 chr7B 87.961 1628 177 16 2747 4366 14996096 14997712 0.000000e+00 1903.0
31 TraesCS7D01G116100 chr7B 90.453 1037 75 15 6500 7529 14064731 14063712 0.000000e+00 1345.0
32 TraesCS7D01G116100 chr7B 88.095 1092 100 18 5262 6340 14065876 14064802 0.000000e+00 1269.0
33 TraesCS7D01G116100 chr7B 89.836 610 45 13 554 1157 13881774 13881176 0.000000e+00 767.0
34 TraesCS7D01G116100 chr7B 89.570 604 52 8 6867 7468 13859541 13858947 0.000000e+00 756.0
35 TraesCS7D01G116100 chr7B 85.866 658 80 10 6867 7516 15000512 15001164 0.000000e+00 688.0
36 TraesCS7D01G116100 chr7B 86.477 599 39 14 4693 5251 13867490 13866894 3.350000e-173 619.0
37 TraesCS7D01G116100 chr7B 83.210 542 57 11 7214 7729 13813000 13812467 4.620000e-127 466.0
38 TraesCS7D01G116100 chr7B 82.153 353 48 13 6431 6773 13113140 13112793 1.070000e-73 289.0
39 TraesCS7D01G116100 chr7B 80.051 396 56 18 6368 6748 13817823 13817436 1.080000e-68 272.0
40 TraesCS7D01G116100 chr7B 82.792 308 36 9 856 1157 13870863 13870567 8.410000e-65 259.0
41 TraesCS7D01G116100 chr7B 88.770 187 12 3 191 377 13882678 13882501 3.970000e-53 220.0
42 TraesCS7D01G116100 chr7B 97.701 87 2 0 8362 8448 13872191 13872105 5.280000e-32 150.0
43 TraesCS7D01G116100 chr7B 91.463 82 6 1 6291 6371 625882037 625882118 2.490000e-20 111.0
44 TraesCS7D01G116100 chrUn 91.915 3216 212 30 1157 4368 82520437 82517266 0.000000e+00 4455.0
45 TraesCS7D01G116100 chrUn 87.634 3178 331 36 1219 4367 84288251 84285107 0.000000e+00 3635.0
46 TraesCS7D01G116100 chrUn 87.634 3178 331 36 1219 4367 226941576 226938432 0.000000e+00 3635.0
47 TraesCS7D01G116100 chrUn 84.176 1504 157 41 6371 7831 84245946 84244481 0.000000e+00 1384.0
48 TraesCS7D01G116100 chrUn 85.607 1070 106 26 5265 6288 84284246 84283179 0.000000e+00 1079.0
49 TraesCS7D01G116100 chrUn 85.607 1070 106 26 5265 6288 226937571 226936504 0.000000e+00 1079.0
50 TraesCS7D01G116100 chrUn 87.957 930 88 17 6371 7283 82525500 82524578 0.000000e+00 1075.0
51 TraesCS7D01G116100 chrUn 85.565 1053 113 19 5262 6283 82515990 82514946 0.000000e+00 1066.0
52 TraesCS7D01G116100 chrUn 85.057 1044 116 27 5263 6288 84438250 84439271 0.000000e+00 1027.0
53 TraesCS7D01G116100 chrUn 89.427 785 72 8 5262 6039 84246745 84245965 0.000000e+00 979.0
54 TraesCS7D01G116100 chrUn 89.491 609 46 12 554 1157 82520879 82520284 0.000000e+00 754.0
55 TraesCS7D01G116100 chrUn 88.519 601 50 12 6869 7468 82514507 82513925 0.000000e+00 710.0
56 TraesCS7D01G116100 chrUn 87.973 582 44 8 4693 5248 82517271 82516690 0.000000e+00 664.0
57 TraesCS7D01G116100 chrUn 92.786 402 29 0 4766 5167 84285075 84284674 4.390000e-162 582.0
58 TraesCS7D01G116100 chrUn 92.786 402 29 0 4766 5167 226938400 226937999 4.390000e-162 582.0
59 TraesCS7D01G116100 chrUn 88.017 484 49 7 4693 5170 82527175 82526695 1.590000e-156 564.0
60 TraesCS7D01G116100 chrUn 87.371 483 52 7 4694 5170 84247626 84247147 5.770000e-151 545.0
61 TraesCS7D01G116100 chrUn 83.871 465 33 14 7268 7710 82524561 82524117 1.020000e-108 405.0
62 TraesCS7D01G116100 chrUn 79.188 394 31 29 1 377 82521897 82521538 8.530000e-55 226.0
63 TraesCS7D01G116100 chr7A 87.658 3168 327 34 1219 4367 76986743 76983621 0.000000e+00 3626.0
64 TraesCS7D01G116100 chr7A 87.877 1625 179 14 2747 4364 77159258 77160871 0.000000e+00 1893.0
65 TraesCS7D01G116100 chr7A 87.431 1639 180 18 2746 4367 76942586 76940957 0.000000e+00 1862.0
66 TraesCS7D01G116100 chr7A 88.942 841 71 13 5265 6086 76982443 76981606 0.000000e+00 1018.0
67 TraesCS7D01G116100 chr1D 92.593 81 6 0 6291 6371 267794485 267794565 5.360000e-22 117.0
68 TraesCS7D01G116100 chr1D 94.444 36 1 1 4667 4701 345809555 345809590 4.000000e-03 54.7
69 TraesCS7D01G116100 chr1A 92.593 81 6 0 6291 6371 335028704 335028624 5.360000e-22 117.0
70 TraesCS7D01G116100 chr1A 91.358 81 7 0 6291 6371 335028545 335028465 2.490000e-20 111.0
71 TraesCS7D01G116100 chr1A 100.000 29 0 0 4666 4694 446122756 446122784 4.000000e-03 54.7
72 TraesCS7D01G116100 chr6B 93.506 77 5 0 6290 6366 204166209 204166133 1.930000e-21 115.0
73 TraesCS7D01G116100 chr2D 91.463 82 6 1 6291 6371 79698537 79698456 2.490000e-20 111.0
74 TraesCS7D01G116100 chr2D 78.808 151 24 6 4466 4610 621480752 621480900 2.510000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G116100 chr7D 71342148 71350595 8447 False 7671.000000 14645 100.000000 1 8448 2 chr7D.!!$F3 8447
1 TraesCS7D01G116100 chr7D 71353549 71356567 3018 False 2042.000000 3810 87.028500 856 4084 2 chr7D.!!$F4 3228
2 TraesCS7D01G116100 chr7D 71212653 71217991 5338 True 1682.666667 3771 84.743667 856 6288 3 chr7D.!!$R2 5432
3 TraesCS7D01G116100 chr7D 71315401 71320915 5514 True 1274.250000 3640 84.214000 685 6288 4 chr7D.!!$R3 5603
4 TraesCS7D01G116100 chr7D 71544210 71546057 1847 True 1148.500000 1334 89.662500 5313 7457 2 chr7D.!!$R4 2144
5 TraesCS7D01G116100 chr7D 71362076 71362661 585 False 651.000000 651 87.543000 4693 5248 1 chr7D.!!$F2 555
6 TraesCS7D01G116100 chr2B 723393164 723406804 13640 True 1841.555556 8405 90.651222 1 8448 9 chr2B.!!$R1 8447
7 TraesCS7D01G116100 chr7B 13866894 13882678 15784 True 1840.750000 7757 90.689875 191 8448 8 chr7B.!!$R5 8257
8 TraesCS7D01G116100 chr7B 14063712 14065876 2164 True 1307.000000 1345 89.274000 5262 7529 2 chr7B.!!$R6 2267
9 TraesCS7D01G116100 chr7B 14996096 15001164 5068 False 1295.500000 1903 86.913500 2747 7516 2 chr7B.!!$F2 4769
10 TraesCS7D01G116100 chr7B 13112793 13117193 4400 True 1118.000000 1947 85.259000 2746 6773 2 chr7B.!!$R4 4027
11 TraesCS7D01G116100 chr7B 13858947 13859541 594 True 756.000000 756 89.570000 6867 7468 1 chr7B.!!$R3 601
12 TraesCS7D01G116100 chr7B 13812467 13813000 533 True 466.000000 466 83.210000 7214 7729 1 chr7B.!!$R1 515
13 TraesCS7D01G116100 chrUn 84283179 84288251 5072 True 1765.333333 3635 88.675667 1219 6288 3 chrUn.!!$R3 5069
14 TraesCS7D01G116100 chrUn 226936504 226941576 5072 True 1765.333333 3635 88.675667 1219 6288 3 chrUn.!!$R4 5069
15 TraesCS7D01G116100 chrUn 82513925 82527175 13250 True 1102.111111 4455 86.944000 1 7710 9 chrUn.!!$R1 7709
16 TraesCS7D01G116100 chrUn 84438250 84439271 1021 False 1027.000000 1027 85.057000 5263 6288 1 chrUn.!!$F1 1025
17 TraesCS7D01G116100 chrUn 84244481 84247626 3145 True 969.333333 1384 86.991333 4694 7831 3 chrUn.!!$R2 3137
18 TraesCS7D01G116100 chr7A 76981606 76986743 5137 True 2322.000000 3626 88.300000 1219 6086 2 chr7A.!!$R2 4867
19 TraesCS7D01G116100 chr7A 77159258 77160871 1613 False 1893.000000 1893 87.877000 2747 4364 1 chr7A.!!$F1 1617
20 TraesCS7D01G116100 chr7A 76940957 76942586 1629 True 1862.000000 1862 87.431000 2746 4367 1 chr7A.!!$R1 1621

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
585 6579 0.465705 GCTGCATACTCACCAGCCTA 59.534 55.0 0.00 0.00 44.60 3.93 F
1147 7308 0.398318 GTCAGGTGACTCCCTTTGCT 59.602 55.0 2.72 0.00 41.65 3.91 F
1468 7632 0.524862 AAGCTGAATGCCAAGAAGCG 59.475 50.0 0.00 0.00 44.23 4.68 F
1766 7930 1.032794 CACTCCTGTCAGCGGCTATA 58.967 55.0 0.26 0.00 0.00 1.31 F
2510 8680 1.107114 GCTTCTCGTGGGATGAGAGA 58.893 55.0 0.00 0.00 40.93 3.10 F
4446 10713 0.746063 ACCAAATATCCGCGGACGTA 59.254 50.0 33.75 21.12 37.70 3.57 F
4617 10900 0.180406 ACTACGGTTGGATGGATGGC 59.820 55.0 0.00 0.00 0.00 4.40 F
5744 13588 0.957888 GCAGGCTTGAAGGTGGAGAC 60.958 60.0 0.00 0.00 0.00 3.36 F
6458 16744 1.149101 ACACCTCCCACCAACTGATT 58.851 50.0 0.00 0.00 0.00 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1537 7701 0.242017 CAAAGCAAAGAAGCCCGAGG 59.758 55.000 0.00 0.00 34.23 4.63 R
2283 8447 2.304180 AGGTGAAGACACTGCTAGCATT 59.696 45.455 19.72 10.33 45.32 3.56 R
3005 9234 3.498397 GGTACAATCTCCATATGGCAACG 59.502 47.826 17.58 6.66 42.51 4.10 R
3330 9560 5.561679 GAAGTGGAGAGAGGTACCAAAATT 58.438 41.667 15.94 0.00 35.40 1.82 R
4454 10721 0.036388 CCAAAGCTCCCGCAGTTAGA 60.036 55.000 0.00 0.00 39.10 2.10 R
5767 13611 0.817634 CGTTGTCTTGCCACTTCCCA 60.818 55.000 0.00 0.00 0.00 4.37 R
6102 13987 1.201647 GCAACAGTACTGCGAGGACTA 59.798 52.381 22.90 0.00 0.00 2.59 R
6779 17205 0.107643 GCCTGCACCCTCCTCTATTC 59.892 60.000 0.00 0.00 0.00 1.75 R
8404 18940 0.039074 GTGTGACTCCCACTCGTCAG 60.039 60.000 0.00 0.00 45.86 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 5313 3.283684 TTGCCAAGTTGGTCCGCG 61.284 61.111 22.85 0.00 40.46 6.46
105 5384 3.689347 TCAATGTGGGAAGAGGTGATTG 58.311 45.455 0.00 0.00 0.00 2.67
106 5385 3.330405 TCAATGTGGGAAGAGGTGATTGA 59.670 43.478 0.00 0.00 0.00 2.57
107 5386 4.018141 TCAATGTGGGAAGAGGTGATTGAT 60.018 41.667 0.00 0.00 0.00 2.57
109 5388 3.955471 TGTGGGAAGAGGTGATTGATTC 58.045 45.455 0.00 0.00 0.00 2.52
110 5389 3.282885 GTGGGAAGAGGTGATTGATTCC 58.717 50.000 0.00 0.00 38.96 3.01
111 5390 2.092968 TGGGAAGAGGTGATTGATTCCG 60.093 50.000 0.00 0.00 40.29 4.30
113 5392 3.198872 GGAAGAGGTGATTGATTCCGTC 58.801 50.000 0.00 0.00 30.90 4.79
116 5395 3.099905 AGAGGTGATTGATTCCGTCTGA 58.900 45.455 0.00 0.00 0.00 3.27
117 5396 3.708631 AGAGGTGATTGATTCCGTCTGAT 59.291 43.478 0.00 0.00 0.00 2.90
118 5397 4.163078 AGAGGTGATTGATTCCGTCTGATT 59.837 41.667 0.00 0.00 0.00 2.57
119 5398 5.363868 AGAGGTGATTGATTCCGTCTGATTA 59.636 40.000 0.00 0.00 0.00 1.75
120 5399 6.042552 AGAGGTGATTGATTCCGTCTGATTAT 59.957 38.462 0.00 0.00 0.00 1.28
121 5400 6.226787 AGGTGATTGATTCCGTCTGATTATC 58.773 40.000 0.00 0.00 0.00 1.75
122 5401 5.409826 GGTGATTGATTCCGTCTGATTATCC 59.590 44.000 0.00 0.00 0.00 2.59
123 5402 5.991606 GTGATTGATTCCGTCTGATTATCCA 59.008 40.000 0.00 0.00 0.00 3.41
124 5403 6.483307 GTGATTGATTCCGTCTGATTATCCAA 59.517 38.462 0.00 0.00 0.00 3.53
125 5404 6.483307 TGATTGATTCCGTCTGATTATCCAAC 59.517 38.462 0.00 0.00 0.00 3.77
126 5405 5.351948 TGATTCCGTCTGATTATCCAACA 57.648 39.130 0.00 0.00 0.00 3.33
127 5406 5.116180 TGATTCCGTCTGATTATCCAACAC 58.884 41.667 0.00 0.00 0.00 3.32
128 5407 3.159353 TCCGTCTGATTATCCAACACG 57.841 47.619 0.00 0.00 0.00 4.49
147 5450 5.242434 ACACGAGTAGAAAAATGTGGCATA 58.758 37.500 0.00 0.00 0.00 3.14
148 5451 5.351465 ACACGAGTAGAAAAATGTGGCATAG 59.649 40.000 0.00 0.00 0.00 2.23
149 5452 5.351465 CACGAGTAGAAAAATGTGGCATAGT 59.649 40.000 0.00 0.00 0.00 2.12
150 5453 5.351465 ACGAGTAGAAAAATGTGGCATAGTG 59.649 40.000 0.00 0.00 0.00 2.74
151 5454 5.351465 CGAGTAGAAAAATGTGGCATAGTGT 59.649 40.000 0.00 0.00 0.00 3.55
152 5455 6.533723 CGAGTAGAAAAATGTGGCATAGTGTA 59.466 38.462 0.00 0.00 0.00 2.90
155 5458 7.829211 AGTAGAAAAATGTGGCATAGTGTATGT 59.171 33.333 0.00 0.00 38.43 2.29
156 5459 9.104965 GTAGAAAAATGTGGCATAGTGTATGTA 57.895 33.333 0.00 0.00 38.43 2.29
158 5461 8.623903 AGAAAAATGTGGCATAGTGTATGTATG 58.376 33.333 0.00 0.00 38.43 2.39
160 5463 8.972458 AAAATGTGGCATAGTGTATGTATGTA 57.028 30.769 0.00 0.00 38.43 2.29
162 5465 8.552083 AATGTGGCATAGTGTATGTATGTATG 57.448 34.615 0.00 0.00 38.43 2.39
164 5467 8.184304 TGTGGCATAGTGTATGTATGTATGTA 57.816 34.615 0.00 0.00 38.43 2.29
165 5468 8.811994 TGTGGCATAGTGTATGTATGTATGTAT 58.188 33.333 0.00 0.00 38.43 2.29
166 5469 9.087424 GTGGCATAGTGTATGTATGTATGTATG 57.913 37.037 0.00 0.00 38.43 2.39
220 5523 3.462483 CACTGCCCGTGGTGTATATTA 57.538 47.619 0.00 0.00 40.02 0.98
221 5524 4.002906 CACTGCCCGTGGTGTATATTAT 57.997 45.455 0.00 0.00 40.02 1.28
222 5525 4.385825 CACTGCCCGTGGTGTATATTATT 58.614 43.478 0.00 0.00 40.02 1.40
223 5526 5.543714 CACTGCCCGTGGTGTATATTATTA 58.456 41.667 0.00 0.00 40.02 0.98
224 5527 5.992829 CACTGCCCGTGGTGTATATTATTAA 59.007 40.000 0.00 0.00 40.02 1.40
225 5528 6.653320 CACTGCCCGTGGTGTATATTATTAAT 59.347 38.462 0.00 0.00 40.02 1.40
226 5529 6.877322 ACTGCCCGTGGTGTATATTATTAATC 59.123 38.462 0.00 0.00 0.00 1.75
227 5530 7.011499 TGCCCGTGGTGTATATTATTAATCT 57.989 36.000 0.00 0.00 0.00 2.40
228 5531 6.876789 TGCCCGTGGTGTATATTATTAATCTG 59.123 38.462 0.00 0.00 0.00 2.90
229 5532 6.183360 GCCCGTGGTGTATATTATTAATCTGC 60.183 42.308 0.00 0.00 0.00 4.26
230 5533 7.103641 CCCGTGGTGTATATTATTAATCTGCT 58.896 38.462 0.00 0.00 0.00 4.24
231 5534 7.064609 CCCGTGGTGTATATTATTAATCTGCTG 59.935 40.741 0.00 0.00 0.00 4.41
232 5535 7.817478 CCGTGGTGTATATTATTAATCTGCTGA 59.183 37.037 0.00 0.00 0.00 4.26
233 5536 9.371136 CGTGGTGTATATTATTAATCTGCTGAT 57.629 33.333 0.00 0.00 33.70 2.90
258 5579 6.595682 AGCTTACTATATTGGTCAGTTGCAT 58.404 36.000 0.00 0.00 0.00 3.96
262 5583 8.902540 TTACTATATTGGTCAGTTGCATAAGG 57.097 34.615 0.00 0.00 0.00 2.69
277 5598 3.181516 GCATAAGGTTTGACTCTCAAGCG 60.182 47.826 0.00 0.00 38.29 4.68
284 5605 4.381079 GGTTTGACTCTCAAGCGTAGATCT 60.381 45.833 0.00 0.00 38.29 2.75
285 5606 4.624336 TTGACTCTCAAGCGTAGATCTC 57.376 45.455 0.00 0.00 31.83 2.75
286 5607 2.609916 TGACTCTCAAGCGTAGATCTCG 59.390 50.000 0.00 4.27 0.00 4.04
287 5608 2.867368 GACTCTCAAGCGTAGATCTCGA 59.133 50.000 15.71 0.00 0.00 4.04
553 5874 1.853963 TAGCTTGGACAGAGGAGGAC 58.146 55.000 0.00 0.00 0.00 3.85
584 6578 1.222936 GCTGCATACTCACCAGCCT 59.777 57.895 0.00 0.00 44.60 4.58
585 6579 0.465705 GCTGCATACTCACCAGCCTA 59.534 55.000 0.00 0.00 44.60 3.93
605 6599 0.888619 TAGAGAGGTCAACACTGGCG 59.111 55.000 0.00 0.00 0.00 5.69
616 6610 1.133253 CACTGGCGTCATTGCTTCG 59.867 57.895 0.00 0.00 34.52 3.79
670 6664 5.046950 AGTTTCTTGTAGCCAAACAAAACCA 60.047 36.000 7.56 0.00 38.81 3.67
672 6666 6.716934 TTCTTGTAGCCAAACAAAACCATA 57.283 33.333 0.00 0.00 38.81 2.74
715 6713 6.591750 TGGGTTTCCTTTATTTTTATGCGA 57.408 33.333 0.00 0.00 0.00 5.10
725 6723 9.729023 CCTTTATTTTTATGCGACAATGTGATA 57.271 29.630 0.00 0.00 0.00 2.15
758 6757 1.905049 GCGAGCGTTAAATTTCTGTGC 59.095 47.619 0.00 0.00 0.00 4.57
761 6760 2.902484 GAGCGTTAAATTTCTGTGCGTG 59.098 45.455 0.00 0.00 0.00 5.34
785 6784 8.084684 GTGCCTCTAAATAATTTCATGGGATTC 58.915 37.037 0.00 0.00 0.00 2.52
820 6819 5.080969 TGCTCCAGTACCAGTATTTGTAC 57.919 43.478 0.00 0.00 38.06 2.90
834 6833 7.413000 CCAGTATTTGTACGATCTGTTCTTTGG 60.413 40.741 0.00 0.00 0.00 3.28
879 6878 3.409026 TCTGTTCTTTGCCTTCTCCTC 57.591 47.619 0.00 0.00 0.00 3.71
880 6879 2.975489 TCTGTTCTTTGCCTTCTCCTCT 59.025 45.455 0.00 0.00 0.00 3.69
881 6880 3.392616 TCTGTTCTTTGCCTTCTCCTCTT 59.607 43.478 0.00 0.00 0.00 2.85
882 6881 3.744660 TGTTCTTTGCCTTCTCCTCTTC 58.255 45.455 0.00 0.00 0.00 2.87
884 6883 4.202503 TGTTCTTTGCCTTCTCCTCTTCAT 60.203 41.667 0.00 0.00 0.00 2.57
890 6889 7.671398 TCTTTGCCTTCTCCTCTTCATAAAAAT 59.329 33.333 0.00 0.00 0.00 1.82
891 6890 6.764308 TGCCTTCTCCTCTTCATAAAAATG 57.236 37.500 0.00 0.00 0.00 2.32
892 6891 6.484288 TGCCTTCTCCTCTTCATAAAAATGA 58.516 36.000 0.00 0.00 0.00 2.57
893 6892 6.600822 TGCCTTCTCCTCTTCATAAAAATGAG 59.399 38.462 0.00 0.00 31.46 2.90
894 6893 6.601217 GCCTTCTCCTCTTCATAAAAATGAGT 59.399 38.462 0.00 0.00 31.46 3.41
953 6953 2.299867 GTTCATGATTGGTGCAGGGTTT 59.700 45.455 0.00 0.00 0.00 3.27
999 6999 2.202260 CACAGATTGCGCGCACAG 60.202 61.111 36.72 24.62 0.00 3.66
1007 7007 3.737172 GCGCGCACAGATGGGTTT 61.737 61.111 29.10 0.00 40.83 3.27
1009 7009 2.877691 GCGCACAGATGGGTTTCC 59.122 61.111 0.30 0.00 40.83 3.13
1018 7018 3.650942 ACAGATGGGTTTCCTCACAAGTA 59.349 43.478 0.00 0.00 0.00 2.24
1019 7019 4.104102 ACAGATGGGTTTCCTCACAAGTAA 59.896 41.667 0.00 0.00 0.00 2.24
1020 7020 5.070001 CAGATGGGTTTCCTCACAAGTAAA 58.930 41.667 0.00 0.00 0.00 2.01
1021 7021 5.711976 CAGATGGGTTTCCTCACAAGTAAAT 59.288 40.000 0.00 0.00 0.00 1.40
1022 7022 5.946377 AGATGGGTTTCCTCACAAGTAAATC 59.054 40.000 0.00 0.00 0.00 2.17
1023 7023 4.403734 TGGGTTTCCTCACAAGTAAATCC 58.596 43.478 0.00 0.00 33.53 3.01
1024 7024 4.105697 TGGGTTTCCTCACAAGTAAATCCT 59.894 41.667 0.00 0.00 33.97 3.24
1025 7025 4.700692 GGGTTTCCTCACAAGTAAATCCTC 59.299 45.833 0.00 0.00 30.83 3.71
1026 7026 5.515008 GGGTTTCCTCACAAGTAAATCCTCT 60.515 44.000 0.00 0.00 30.83 3.69
1027 7027 5.644206 GGTTTCCTCACAAGTAAATCCTCTC 59.356 44.000 0.00 0.00 0.00 3.20
1028 7028 5.422214 TTCCTCACAAGTAAATCCTCTCC 57.578 43.478 0.00 0.00 0.00 3.71
1029 7029 4.689062 TCCTCACAAGTAAATCCTCTCCT 58.311 43.478 0.00 0.00 0.00 3.69
1030 7030 4.712337 TCCTCACAAGTAAATCCTCTCCTC 59.288 45.833 0.00 0.00 0.00 3.71
1031 7031 4.467795 CCTCACAAGTAAATCCTCTCCTCA 59.532 45.833 0.00 0.00 0.00 3.86
1032 7032 5.046304 CCTCACAAGTAAATCCTCTCCTCAA 60.046 44.000 0.00 0.00 0.00 3.02
1033 7033 6.042638 TCACAAGTAAATCCTCTCCTCAAG 57.957 41.667 0.00 0.00 0.00 3.02
1034 7034 5.544176 TCACAAGTAAATCCTCTCCTCAAGT 59.456 40.000 0.00 0.00 0.00 3.16
1035 7035 6.043243 TCACAAGTAAATCCTCTCCTCAAGTT 59.957 38.462 0.00 0.00 0.00 2.66
1036 7036 6.370166 CACAAGTAAATCCTCTCCTCAAGTTC 59.630 42.308 0.00 0.00 0.00 3.01
1037 7037 5.685520 AGTAAATCCTCTCCTCAAGTTCC 57.314 43.478 0.00 0.00 0.00 3.62
1038 7038 5.346270 AGTAAATCCTCTCCTCAAGTTCCT 58.654 41.667 0.00 0.00 0.00 3.36
1039 7039 4.835284 AAATCCTCTCCTCAAGTTCCTC 57.165 45.455 0.00 0.00 0.00 3.71
1040 7040 3.481559 ATCCTCTCCTCAAGTTCCTCA 57.518 47.619 0.00 0.00 0.00 3.86
1041 7041 3.481559 TCCTCTCCTCAAGTTCCTCAT 57.518 47.619 0.00 0.00 0.00 2.90
1042 7042 3.102972 TCCTCTCCTCAAGTTCCTCATG 58.897 50.000 0.00 0.00 0.00 3.07
1043 7043 2.836981 CCTCTCCTCAAGTTCCTCATGT 59.163 50.000 0.00 0.00 0.00 3.21
1044 7044 3.262915 CCTCTCCTCAAGTTCCTCATGTT 59.737 47.826 0.00 0.00 0.00 2.71
1045 7045 4.467795 CCTCTCCTCAAGTTCCTCATGTTA 59.532 45.833 0.00 0.00 0.00 2.41
1046 7046 5.407407 TCTCCTCAAGTTCCTCATGTTAC 57.593 43.478 0.00 0.00 0.00 2.50
1047 7047 4.838423 TCTCCTCAAGTTCCTCATGTTACA 59.162 41.667 0.00 0.00 0.00 2.41
1048 7048 5.485353 TCTCCTCAAGTTCCTCATGTTACAT 59.515 40.000 0.00 0.00 0.00 2.29
1049 7049 6.667848 TCTCCTCAAGTTCCTCATGTTACATA 59.332 38.462 0.00 0.00 0.00 2.29
1050 7050 6.878317 TCCTCAAGTTCCTCATGTTACATAG 58.122 40.000 0.00 0.00 0.00 2.23
1051 7051 5.525378 CCTCAAGTTCCTCATGTTACATAGC 59.475 44.000 0.00 0.00 0.00 2.97
1052 7052 6.048732 TCAAGTTCCTCATGTTACATAGCA 57.951 37.500 0.00 0.00 0.00 3.49
1053 7053 6.108687 TCAAGTTCCTCATGTTACATAGCAG 58.891 40.000 0.00 0.00 0.00 4.24
1054 7054 4.446371 AGTTCCTCATGTTACATAGCAGC 58.554 43.478 0.00 0.00 0.00 5.25
1055 7055 4.163078 AGTTCCTCATGTTACATAGCAGCT 59.837 41.667 0.00 0.00 0.00 4.24
1056 7056 5.363868 AGTTCCTCATGTTACATAGCAGCTA 59.636 40.000 4.10 4.10 0.00 3.32
1057 7057 5.201713 TCCTCATGTTACATAGCAGCTAC 57.798 43.478 3.59 0.00 0.00 3.58
1058 7058 4.039245 TCCTCATGTTACATAGCAGCTACC 59.961 45.833 3.59 0.00 0.00 3.18
1059 7059 3.977427 TCATGTTACATAGCAGCTACCG 58.023 45.455 3.59 1.45 0.00 4.02
1060 7060 3.383505 TCATGTTACATAGCAGCTACCGT 59.616 43.478 3.59 7.88 0.00 4.83
1061 7061 4.581409 TCATGTTACATAGCAGCTACCGTA 59.419 41.667 3.59 6.85 0.00 4.02
1062 7062 4.297299 TGTTACATAGCAGCTACCGTAC 57.703 45.455 3.59 2.23 0.00 3.67
1063 7063 3.695556 TGTTACATAGCAGCTACCGTACA 59.304 43.478 3.59 4.86 0.00 2.90
1064 7064 4.340097 TGTTACATAGCAGCTACCGTACAT 59.660 41.667 3.59 0.00 0.00 2.29
1065 7065 3.644884 ACATAGCAGCTACCGTACATC 57.355 47.619 3.59 0.00 0.00 3.06
1066 7066 2.956333 ACATAGCAGCTACCGTACATCA 59.044 45.455 3.59 0.00 0.00 3.07
1067 7067 3.243434 ACATAGCAGCTACCGTACATCAC 60.243 47.826 3.59 0.00 0.00 3.06
1068 7068 1.475403 AGCAGCTACCGTACATCACT 58.525 50.000 0.00 0.00 0.00 3.41
1069 7069 2.651455 AGCAGCTACCGTACATCACTA 58.349 47.619 0.00 0.00 0.00 2.74
1070 7070 2.358267 AGCAGCTACCGTACATCACTAC 59.642 50.000 0.00 0.00 0.00 2.73
1071 7071 2.358267 GCAGCTACCGTACATCACTACT 59.642 50.000 0.00 0.00 0.00 2.57
1072 7072 3.792459 GCAGCTACCGTACATCACTACTG 60.792 52.174 0.00 0.00 0.00 2.74
1073 7073 2.358267 AGCTACCGTACATCACTACTGC 59.642 50.000 0.00 0.00 0.00 4.40
1074 7074 2.358267 GCTACCGTACATCACTACTGCT 59.642 50.000 0.00 0.00 0.00 4.24
1075 7075 3.562973 GCTACCGTACATCACTACTGCTA 59.437 47.826 0.00 0.00 0.00 3.49
1076 7076 4.554330 GCTACCGTACATCACTACTGCTAC 60.554 50.000 0.00 0.00 0.00 3.58
1077 7077 3.349927 ACCGTACATCACTACTGCTACA 58.650 45.455 0.00 0.00 0.00 2.74
1078 7078 3.128242 ACCGTACATCACTACTGCTACAC 59.872 47.826 0.00 0.00 0.00 2.90
1079 7079 3.488721 CCGTACATCACTACTGCTACACC 60.489 52.174 0.00 0.00 0.00 4.16
1080 7080 3.377485 CGTACATCACTACTGCTACACCT 59.623 47.826 0.00 0.00 0.00 4.00
1081 7081 4.142447 CGTACATCACTACTGCTACACCTT 60.142 45.833 0.00 0.00 0.00 3.50
1082 7082 4.891992 ACATCACTACTGCTACACCTTT 57.108 40.909 0.00 0.00 0.00 3.11
1083 7083 4.569943 ACATCACTACTGCTACACCTTTG 58.430 43.478 0.00 0.00 0.00 2.77
1084 7084 3.040147 TCACTACTGCTACACCTTTGC 57.960 47.619 0.00 0.00 0.00 3.68
1085 7085 2.632996 TCACTACTGCTACACCTTTGCT 59.367 45.455 0.00 0.00 0.00 3.91
1086 7086 3.830178 TCACTACTGCTACACCTTTGCTA 59.170 43.478 0.00 0.00 0.00 3.49
1087 7087 4.282449 TCACTACTGCTACACCTTTGCTAA 59.718 41.667 0.00 0.00 0.00 3.09
1088 7088 4.389077 CACTACTGCTACACCTTTGCTAAC 59.611 45.833 0.00 0.00 0.00 2.34
1089 7089 2.413837 ACTGCTACACCTTTGCTAACG 58.586 47.619 0.00 0.00 0.00 3.18
1090 7090 1.732259 CTGCTACACCTTTGCTAACGG 59.268 52.381 0.00 0.00 0.00 4.44
1091 7091 1.071071 TGCTACACCTTTGCTAACGGT 59.929 47.619 0.00 0.00 0.00 4.83
1094 7094 3.015516 CACCTTTGCTAACGGTGGT 57.984 52.632 16.08 3.53 43.41 4.16
1146 7307 2.934083 GTCAGGTGACTCCCTTTGC 58.066 57.895 2.72 0.00 41.65 3.68
1147 7308 0.398318 GTCAGGTGACTCCCTTTGCT 59.602 55.000 2.72 0.00 41.65 3.91
1148 7309 1.623811 GTCAGGTGACTCCCTTTGCTA 59.376 52.381 2.72 0.00 41.65 3.49
1149 7310 2.038557 GTCAGGTGACTCCCTTTGCTAA 59.961 50.000 2.72 0.00 41.65 3.09
1150 7311 2.708861 TCAGGTGACTCCCTTTGCTAAA 59.291 45.455 0.00 0.00 40.21 1.85
1151 7312 3.077359 CAGGTGACTCCCTTTGCTAAAG 58.923 50.000 0.00 0.00 40.21 1.85
1152 7313 1.813178 GGTGACTCCCTTTGCTAAAGC 59.187 52.381 0.00 0.00 42.50 3.51
1153 7314 2.553247 GGTGACTCCCTTTGCTAAAGCT 60.553 50.000 3.26 0.00 42.66 3.74
1154 7315 2.485814 GTGACTCCCTTTGCTAAAGCTG 59.514 50.000 3.26 0.00 42.66 4.24
1155 7316 2.087646 GACTCCCTTTGCTAAAGCTGG 58.912 52.381 3.26 3.36 42.66 4.85
1156 7317 1.272147 ACTCCCTTTGCTAAAGCTGGG 60.272 52.381 16.65 16.65 43.03 4.45
1157 7318 1.004745 CTCCCTTTGCTAAAGCTGGGA 59.995 52.381 21.01 21.01 45.57 4.37
1158 7319 1.640670 TCCCTTTGCTAAAGCTGGGAT 59.359 47.619 19.52 0.00 44.22 3.85
1159 7320 1.753073 CCCTTTGCTAAAGCTGGGATG 59.247 52.381 17.39 0.00 43.74 3.51
1160 7321 1.753073 CCTTTGCTAAAGCTGGGATGG 59.247 52.381 3.26 0.00 42.66 3.51
1161 7322 1.753073 CTTTGCTAAAGCTGGGATGGG 59.247 52.381 3.26 0.00 42.66 4.00
1162 7323 0.704076 TTGCTAAAGCTGGGATGGGT 59.296 50.000 3.26 0.00 42.66 4.51
1163 7324 0.704076 TGCTAAAGCTGGGATGGGTT 59.296 50.000 3.26 0.00 42.66 4.11
1164 7325 1.340991 TGCTAAAGCTGGGATGGGTTC 60.341 52.381 3.26 0.00 42.66 3.62
1165 7326 2.024306 GCTAAAGCTGGGATGGGTTCC 61.024 57.143 0.00 0.00 39.99 3.62
1173 7334 3.577389 GGATGGGTTCCCTCACAAG 57.423 57.895 9.43 0.00 38.75 3.16
1174 7335 0.698818 GGATGGGTTCCCTCACAAGT 59.301 55.000 9.43 0.00 38.75 3.16
1175 7336 1.913419 GGATGGGTTCCCTCACAAGTA 59.087 52.381 9.43 0.00 38.75 2.24
1176 7337 2.307686 GGATGGGTTCCCTCACAAGTAA 59.692 50.000 9.43 0.00 38.75 2.24
1177 7338 3.245122 GGATGGGTTCCCTCACAAGTAAA 60.245 47.826 9.43 0.00 38.75 2.01
1178 7339 4.569865 GGATGGGTTCCCTCACAAGTAAAT 60.570 45.833 9.43 0.00 38.75 1.40
1179 7340 4.028993 TGGGTTCCCTCACAAGTAAATC 57.971 45.455 9.43 0.00 0.00 2.17
1180 7341 3.245122 TGGGTTCCCTCACAAGTAAATCC 60.245 47.826 9.43 0.00 0.00 3.01
1181 7342 3.010250 GGGTTCCCTCACAAGTAAATCCT 59.990 47.826 0.00 0.00 0.00 3.24
1182 7343 4.262617 GGTTCCCTCACAAGTAAATCCTC 58.737 47.826 0.00 0.00 0.00 3.71
1183 7344 4.019231 GGTTCCCTCACAAGTAAATCCTCT 60.019 45.833 0.00 0.00 0.00 3.69
1184 7345 5.179533 GTTCCCTCACAAGTAAATCCTCTC 58.820 45.833 0.00 0.00 0.00 3.20
1185 7346 3.775316 TCCCTCACAAGTAAATCCTCTCC 59.225 47.826 0.00 0.00 0.00 3.71
1186 7347 3.777522 CCCTCACAAGTAAATCCTCTCCT 59.222 47.826 0.00 0.00 0.00 3.69
1187 7348 4.141824 CCCTCACAAGTAAATCCTCTCCTC 60.142 50.000 0.00 0.00 0.00 3.71
1188 7349 4.467795 CCTCACAAGTAAATCCTCTCCTCA 59.532 45.833 0.00 0.00 0.00 3.86
1189 7350 5.046304 CCTCACAAGTAAATCCTCTCCTCAA 60.046 44.000 0.00 0.00 0.00 3.02
1190 7351 6.042638 TCACAAGTAAATCCTCTCCTCAAG 57.957 41.667 0.00 0.00 0.00 3.02
1191 7352 5.544176 TCACAAGTAAATCCTCTCCTCAAGT 59.456 40.000 0.00 0.00 0.00 3.16
1192 7353 6.043243 TCACAAGTAAATCCTCTCCTCAAGTT 59.957 38.462 0.00 0.00 0.00 2.66
1193 7354 6.370166 CACAAGTAAATCCTCTCCTCAAGTTC 59.630 42.308 0.00 0.00 0.00 3.01
1194 7355 5.685520 AGTAAATCCTCTCCTCAAGTTCC 57.314 43.478 0.00 0.00 0.00 3.62
1195 7356 5.346270 AGTAAATCCTCTCCTCAAGTTCCT 58.654 41.667 0.00 0.00 0.00 3.36
1196 7357 4.835284 AAATCCTCTCCTCAAGTTCCTC 57.165 45.455 0.00 0.00 0.00 3.71
1197 7358 3.481559 ATCCTCTCCTCAAGTTCCTCA 57.518 47.619 0.00 0.00 0.00 3.86
1198 7359 3.481559 TCCTCTCCTCAAGTTCCTCAT 57.518 47.619 0.00 0.00 0.00 2.90
1199 7360 3.102972 TCCTCTCCTCAAGTTCCTCATG 58.897 50.000 0.00 0.00 0.00 3.07
1200 7361 2.836981 CCTCTCCTCAAGTTCCTCATGT 59.163 50.000 0.00 0.00 0.00 3.21
1201 7362 3.262915 CCTCTCCTCAAGTTCCTCATGTT 59.737 47.826 0.00 0.00 0.00 2.71
1202 7363 4.467795 CCTCTCCTCAAGTTCCTCATGTTA 59.532 45.833 0.00 0.00 0.00 2.41
1203 7364 5.407407 TCTCCTCAAGTTCCTCATGTTAC 57.593 43.478 0.00 0.00 0.00 2.50
1204 7365 4.838423 TCTCCTCAAGTTCCTCATGTTACA 59.162 41.667 0.00 0.00 0.00 2.41
1205 7366 5.485353 TCTCCTCAAGTTCCTCATGTTACAT 59.515 40.000 0.00 0.00 0.00 2.29
1206 7367 6.667848 TCTCCTCAAGTTCCTCATGTTACATA 59.332 38.462 0.00 0.00 0.00 2.29
1207 7368 6.878317 TCCTCAAGTTCCTCATGTTACATAG 58.122 40.000 0.00 0.00 0.00 2.23
1208 7369 5.525378 CCTCAAGTTCCTCATGTTACATAGC 59.475 44.000 0.00 0.00 0.00 2.97
1209 7370 6.048732 TCAAGTTCCTCATGTTACATAGCA 57.951 37.500 0.00 0.00 0.00 3.49
1210 7371 6.108687 TCAAGTTCCTCATGTTACATAGCAG 58.891 40.000 0.00 0.00 0.00 4.24
1211 7372 4.446371 AGTTCCTCATGTTACATAGCAGC 58.554 43.478 0.00 0.00 0.00 5.25
1212 7373 4.163078 AGTTCCTCATGTTACATAGCAGCT 59.837 41.667 0.00 0.00 0.00 4.24
1213 7374 5.363868 AGTTCCTCATGTTACATAGCAGCTA 59.636 40.000 4.10 4.10 0.00 3.32
1214 7375 5.201713 TCCTCATGTTACATAGCAGCTAC 57.798 43.478 3.59 0.00 0.00 3.58
1215 7376 4.039245 TCCTCATGTTACATAGCAGCTACC 59.961 45.833 3.59 0.00 0.00 3.18
1216 7377 3.977427 TCATGTTACATAGCAGCTACCG 58.023 45.455 3.59 1.45 0.00 4.02
1217 7378 3.383505 TCATGTTACATAGCAGCTACCGT 59.616 43.478 3.59 7.88 0.00 4.83
1226 7387 2.651455 AGCAGCTACCGTACATCACTA 58.349 47.619 0.00 0.00 0.00 2.74
1232 7393 3.562973 GCTACCGTACATCACTACTGCTA 59.437 47.826 0.00 0.00 0.00 3.49
1233 7394 4.554330 GCTACCGTACATCACTACTGCTAC 60.554 50.000 0.00 0.00 0.00 3.58
1245 7406 4.389077 CACTACTGCTACACCTTTGCTAAC 59.611 45.833 0.00 0.00 0.00 2.34
1247 7408 1.732259 CTGCTACACCTTTGCTAACGG 59.268 52.381 0.00 0.00 0.00 4.44
1277 7441 2.184579 GGCGGTGAGGTAGCTGAC 59.815 66.667 0.00 0.00 0.00 3.51
1380 7544 1.074889 TGGGCTACAAGAAACCCCTTC 59.925 52.381 0.00 0.00 42.07 3.46
1436 7600 1.269569 CGAGCACACAACCAGTACTCA 60.270 52.381 0.00 0.00 0.00 3.41
1437 7601 2.408050 GAGCACACAACCAGTACTCAG 58.592 52.381 0.00 0.00 0.00 3.35
1459 7623 2.751259 TGTTCATGGAGAAGCTGAATGC 59.249 45.455 0.00 0.00 36.78 3.56
1468 7632 0.524862 AAGCTGAATGCCAAGAAGCG 59.475 50.000 0.00 0.00 44.23 4.68
1522 7686 5.013079 TCTGGACTATTGTTTCCTGTCACAT 59.987 40.000 0.00 0.00 33.63 3.21
1617 7781 6.485648 TCTCAAGGCATTCATCAATGTATCAG 59.514 38.462 0.00 0.00 41.51 2.90
1630 7794 4.946160 ATGTATCAGTTGGGAAAGGGAA 57.054 40.909 0.00 0.00 0.00 3.97
1664 7828 1.346197 CTATGTGCTCGCTGCGTTG 59.654 57.895 22.48 16.37 46.63 4.10
1670 7834 2.633657 CTCGCTGCGTTGCTGTTT 59.366 55.556 22.48 0.00 0.00 2.83
1766 7930 1.032794 CACTCCTGTCAGCGGCTATA 58.967 55.000 0.26 0.00 0.00 1.31
1919 8083 4.114073 CAAGTGTTCAGCTTTGCATTTCA 58.886 39.130 0.00 0.00 0.00 2.69
1924 8088 2.309613 TCAGCTTTGCATTTCACTGGT 58.690 42.857 0.00 0.00 0.00 4.00
1946 8110 1.860676 TTCTATACGATGCGGTTGGC 58.139 50.000 0.00 0.00 43.96 4.52
2228 8392 2.859165 TCATGTTCTGGTCTTCACCC 57.141 50.000 0.00 0.00 42.99 4.61
2283 8447 6.498538 TGCTATCTTTTGAAAATCCCCCTTA 58.501 36.000 0.00 0.00 0.00 2.69
2449 8613 3.763057 ACGGGCAAGTTAGGAAGAAATT 58.237 40.909 0.00 0.00 0.00 1.82
2452 8616 4.923281 CGGGCAAGTTAGGAAGAAATTTTG 59.077 41.667 0.00 0.00 0.00 2.44
2510 8680 1.107114 GCTTCTCGTGGGATGAGAGA 58.893 55.000 0.00 0.00 40.93 3.10
2657 8827 5.760484 AAATTGAAGGCATGGTATGGTTT 57.240 34.783 0.00 0.00 0.00 3.27
2658 8828 5.343307 AATTGAAGGCATGGTATGGTTTC 57.657 39.130 0.00 0.00 0.00 2.78
2703 8890 7.621428 AATGAAATAGATGCCATATTCGGAG 57.379 36.000 0.00 0.00 0.00 4.63
2973 9202 4.526650 GGGGAAAGATACCACAACACAATT 59.473 41.667 0.00 0.00 0.00 2.32
3072 9301 2.703536 TCTTAGTGGTGGTCAGAAGCAA 59.296 45.455 0.00 0.00 34.02 3.91
3381 9611 6.434340 AGAAGTCACCATATGCTGATATACGA 59.566 38.462 4.06 0.00 0.00 3.43
3862 10113 3.242870 GCTGCTAATGTCCAAAATCCTCG 60.243 47.826 0.00 0.00 0.00 4.63
3866 10117 4.201822 GCTAATGTCCAAAATCCTCGTGTC 60.202 45.833 0.00 0.00 0.00 3.67
3931 10182 5.710513 TGCACAATGTTCTTCTTGCTATT 57.289 34.783 0.00 0.00 0.00 1.73
4398 10665 1.429148 GCGGATCACATGAACGGTCC 61.429 60.000 0.00 1.55 0.00 4.46
4404 10671 2.819595 CATGAACGGTCCGGGCAG 60.820 66.667 17.28 6.49 0.00 4.85
4439 10706 1.792949 CGCTAGTCACCAAATATCCGC 59.207 52.381 0.00 0.00 0.00 5.54
4446 10713 0.746063 ACCAAATATCCGCGGACGTA 59.254 50.000 33.75 21.12 37.70 3.57
4454 10721 0.388391 TCCGCGGACGTACGAATTTT 60.388 50.000 27.28 0.00 37.70 1.82
4485 10767 2.680370 GCTTTGGGGGAGTCCGGAT 61.680 63.158 7.81 0.00 36.01 4.18
4556 10839 4.223923 TCCACTCATCTCTTTTTCCTCTCC 59.776 45.833 0.00 0.00 0.00 3.71
4617 10900 0.180406 ACTACGGTTGGATGGATGGC 59.820 55.000 0.00 0.00 0.00 4.40
4801 11170 5.008217 TGTTCTCATTAACCGAAACCTGTTG 59.992 40.000 0.00 0.00 0.00 3.33
5618 13450 9.683069 GGTAATCAGATGTAAATATTTGCAAGG 57.317 33.333 20.62 13.55 36.40 3.61
5730 13574 1.180029 ACATGGAATCACTTGCAGGC 58.820 50.000 0.00 0.00 37.94 4.85
5744 13588 0.957888 GCAGGCTTGAAGGTGGAGAC 60.958 60.000 0.00 0.00 0.00 3.36
5767 13611 6.650120 ACAAGATTGGTATAGTTGGTCGAAT 58.350 36.000 0.00 0.00 0.00 3.34
5951 13795 8.741841 GGTACAGTAAGATACAATCTAGATCCC 58.258 40.741 5.51 0.00 39.08 3.85
6024 13880 8.846943 TCTATGTTGCTTTTTCTCATCTTACA 57.153 30.769 0.00 0.00 0.00 2.41
6066 13922 7.621428 AATGATGAAAAGGTATCACACTGAG 57.379 36.000 0.00 0.00 36.26 3.35
6079 13935 3.006217 TCACACTGAGAGAACCTGATGTG 59.994 47.826 0.00 0.00 38.01 3.21
6089 13945 5.707298 AGAGAACCTGATGTGTGTTTATTGG 59.293 40.000 0.00 0.00 0.00 3.16
6102 13987 8.855110 TGTGTGTTTATTGGTTAATCATGAGTT 58.145 29.630 0.00 0.00 0.00 3.01
6341 16619 7.141363 CCTTGTTCATCAGTTTAGACTTTTGG 58.859 38.462 0.00 0.00 32.54 3.28
6458 16744 1.149101 ACACCTCCCACCAACTGATT 58.851 50.000 0.00 0.00 0.00 2.57
6748 17172 5.500234 ACACATGTGCCACTAAATATGTCT 58.500 37.500 25.68 0.00 0.00 3.41
6779 17205 1.001597 GTCCTAGGCGTATTCTCCACG 60.002 57.143 2.96 0.00 42.24 4.94
6811 17244 1.745489 GCAGGCCCAAGTACTTCGG 60.745 63.158 14.40 14.40 0.00 4.30
7039 17531 1.522580 GGATGAAGCGACAGCCTCC 60.523 63.158 11.93 2.01 46.67 4.30
7233 17729 4.929808 ACATGTTTGTAGAACTCATCGTCC 59.070 41.667 0.00 0.00 33.16 4.79
7247 17743 1.843368 TCGTCCTATTGACCCGAACT 58.157 50.000 0.00 0.00 41.18 3.01
7402 17908 2.768527 TGAAGGATCTCTCTTCCGCAAT 59.231 45.455 7.48 0.00 39.72 3.56
7473 17980 9.346725 GAAGAGACTGCCAATTTTTATGTTTAG 57.653 33.333 0.00 0.00 0.00 1.85
7474 17981 7.315890 AGAGACTGCCAATTTTTATGTTTAGC 58.684 34.615 0.00 0.00 0.00 3.09
7651 18183 6.594788 ACCAGAAATTCTGTGCAATACATT 57.405 33.333 20.18 0.00 42.80 2.71
7823 18355 1.802365 GTTATGGCCGAGTCGTTTGTT 59.198 47.619 12.31 0.00 0.00 2.83
8054 18589 9.965824 ACAAAGAATAGTTGAAACTGTATTTGG 57.034 29.630 21.26 9.94 39.05 3.28
8161 18697 4.819761 GCCGCAGCTCACCATCGA 62.820 66.667 0.00 0.00 35.50 3.59
8162 18698 2.584418 CCGCAGCTCACCATCGAG 60.584 66.667 0.00 0.00 36.02 4.04
8169 18705 2.084844 CTCACCATCGAGCTGTTGC 58.915 57.895 0.00 0.00 40.05 4.17
8181 18717 1.373570 GCTGTTGCTGGTATGTCTCC 58.626 55.000 0.00 0.00 36.03 3.71
8182 18718 1.065854 GCTGTTGCTGGTATGTCTCCT 60.066 52.381 0.00 0.00 36.03 3.69
8183 18719 2.898705 CTGTTGCTGGTATGTCTCCTC 58.101 52.381 0.00 0.00 0.00 3.71
8184 18720 2.499289 CTGTTGCTGGTATGTCTCCTCT 59.501 50.000 0.00 0.00 0.00 3.69
8185 18721 2.497675 TGTTGCTGGTATGTCTCCTCTC 59.502 50.000 0.00 0.00 0.00 3.20
8186 18722 2.497675 GTTGCTGGTATGTCTCCTCTCA 59.502 50.000 0.00 0.00 0.00 3.27
8187 18723 2.103373 TGCTGGTATGTCTCCTCTCAC 58.897 52.381 0.00 0.00 0.00 3.51
8188 18724 2.103373 GCTGGTATGTCTCCTCTCACA 58.897 52.381 0.00 0.00 0.00 3.58
8189 18725 2.100584 GCTGGTATGTCTCCTCTCACAG 59.899 54.545 0.00 0.00 0.00 3.66
8190 18726 2.100584 CTGGTATGTCTCCTCTCACAGC 59.899 54.545 0.00 0.00 0.00 4.40
8191 18727 2.103373 GGTATGTCTCCTCTCACAGCA 58.897 52.381 0.00 0.00 0.00 4.41
8192 18728 2.697751 GGTATGTCTCCTCTCACAGCAT 59.302 50.000 0.00 0.00 0.00 3.79
8193 18729 2.983907 ATGTCTCCTCTCACAGCATG 57.016 50.000 0.00 0.00 46.00 4.06
8194 18730 0.900421 TGTCTCCTCTCACAGCATGG 59.100 55.000 0.00 0.00 43.62 3.66
8195 18731 0.901124 GTCTCCTCTCACAGCATGGT 59.099 55.000 0.00 0.00 43.62 3.55
8196 18732 2.103373 GTCTCCTCTCACAGCATGGTA 58.897 52.381 0.00 0.00 43.62 3.25
8197 18733 2.697751 GTCTCCTCTCACAGCATGGTAT 59.302 50.000 0.00 0.00 43.62 2.73
8198 18734 2.961741 TCTCCTCTCACAGCATGGTATC 59.038 50.000 0.00 0.00 43.62 2.24
8199 18735 1.683385 TCCTCTCACAGCATGGTATCG 59.317 52.381 0.00 0.00 43.62 2.92
8200 18736 1.683385 CCTCTCACAGCATGGTATCGA 59.317 52.381 0.00 0.00 43.62 3.59
8201 18737 2.544694 CCTCTCACAGCATGGTATCGAC 60.545 54.545 0.00 0.00 43.62 4.20
8211 18747 1.285023 GGTATCGACCGGGTCATCG 59.715 63.158 25.80 13.66 35.52 3.84
8230 18766 4.640855 CGCGGACGTGTGTGGAGT 62.641 66.667 0.00 0.00 33.53 3.85
8231 18767 3.036084 GCGGACGTGTGTGGAGTG 61.036 66.667 0.00 0.00 0.00 3.51
8232 18768 2.355837 CGGACGTGTGTGGAGTGG 60.356 66.667 0.00 0.00 0.00 4.00
8233 18769 2.665185 GGACGTGTGTGGAGTGGC 60.665 66.667 0.00 0.00 0.00 5.01
8234 18770 2.108157 GACGTGTGTGGAGTGGCA 59.892 61.111 0.00 0.00 0.00 4.92
8235 18771 1.956170 GACGTGTGTGGAGTGGCAG 60.956 63.158 0.00 0.00 0.00 4.85
8236 18772 3.349006 CGTGTGTGGAGTGGCAGC 61.349 66.667 0.00 0.00 0.00 5.25
8237 18773 2.111878 GTGTGTGGAGTGGCAGCT 59.888 61.111 0.00 0.00 0.00 4.24
8238 18774 2.111669 TGTGTGGAGTGGCAGCTG 59.888 61.111 10.11 10.11 0.00 4.24
8239 18775 2.111878 GTGTGGAGTGGCAGCTGT 59.888 61.111 16.64 0.00 0.00 4.40
8240 18776 2.111669 TGTGGAGTGGCAGCTGTG 59.888 61.111 16.64 0.00 0.00 3.66
8277 18813 4.388499 GGCTGGTTCCGGCGAGAA 62.388 66.667 9.30 7.67 39.09 2.87
8278 18814 2.815647 GCTGGTTCCGGCGAGAAG 60.816 66.667 9.30 0.00 0.00 2.85
8279 18815 2.125512 CTGGTTCCGGCGAGAAGG 60.126 66.667 9.30 0.00 0.00 3.46
8280 18816 2.920912 TGGTTCCGGCGAGAAGGT 60.921 61.111 9.30 0.00 0.00 3.50
8281 18817 2.434359 GGTTCCGGCGAGAAGGTG 60.434 66.667 9.30 0.00 0.00 4.00
8282 18818 2.434359 GTTCCGGCGAGAAGGTGG 60.434 66.667 9.30 0.00 0.00 4.61
8283 18819 2.602267 TTCCGGCGAGAAGGTGGA 60.602 61.111 9.30 0.00 0.00 4.02
8284 18820 2.646175 TTCCGGCGAGAAGGTGGAG 61.646 63.158 9.30 0.00 0.00 3.86
8285 18821 4.821589 CCGGCGAGAAGGTGGAGC 62.822 72.222 9.30 0.00 0.00 4.70
8286 18822 3.764466 CGGCGAGAAGGTGGAGCT 61.764 66.667 0.00 0.00 0.00 4.09
8287 18823 2.125350 GGCGAGAAGGTGGAGCTG 60.125 66.667 0.00 0.00 0.00 4.24
8288 18824 2.817396 GCGAGAAGGTGGAGCTGC 60.817 66.667 0.00 0.00 0.00 5.25
8289 18825 2.507992 CGAGAAGGTGGAGCTGCG 60.508 66.667 0.00 0.00 0.00 5.18
8290 18826 2.125350 GAGAAGGTGGAGCTGCGG 60.125 66.667 0.00 0.00 0.00 5.69
8291 18827 2.925170 AGAAGGTGGAGCTGCGGT 60.925 61.111 0.00 0.00 0.00 5.68
8292 18828 2.032681 GAAGGTGGAGCTGCGGTT 59.967 61.111 0.00 0.00 0.00 4.44
8293 18829 2.281761 AAGGTGGAGCTGCGGTTG 60.282 61.111 0.00 0.00 0.00 3.77
8296 18832 3.730761 GTGGAGCTGCGGTTGCTG 61.731 66.667 0.00 0.00 41.30 4.41
8302 18838 4.206958 CTGCGGTTGCTGCTGATA 57.793 55.556 0.00 0.00 43.34 2.15
8303 18839 2.470156 CTGCGGTTGCTGCTGATAA 58.530 52.632 0.00 0.00 43.34 1.75
8304 18840 0.376152 CTGCGGTTGCTGCTGATAAG 59.624 55.000 0.00 0.00 43.34 1.73
8305 18841 1.026182 TGCGGTTGCTGCTGATAAGG 61.026 55.000 0.00 0.00 43.34 2.69
8306 18842 0.744414 GCGGTTGCTGCTGATAAGGA 60.744 55.000 0.00 0.00 38.39 3.36
8307 18843 1.293924 CGGTTGCTGCTGATAAGGAG 58.706 55.000 0.00 0.00 0.00 3.69
8308 18844 1.134699 CGGTTGCTGCTGATAAGGAGA 60.135 52.381 2.00 0.00 0.00 3.71
8309 18845 2.559440 GGTTGCTGCTGATAAGGAGAG 58.441 52.381 2.00 0.00 0.00 3.20
8310 18846 2.559440 GTTGCTGCTGATAAGGAGAGG 58.441 52.381 2.00 0.00 0.00 3.69
8311 18847 2.165357 TGCTGCTGATAAGGAGAGGA 57.835 50.000 2.00 0.00 0.00 3.71
8312 18848 2.037901 TGCTGCTGATAAGGAGAGGAG 58.962 52.381 2.00 0.00 0.00 3.69
8313 18849 2.038659 GCTGCTGATAAGGAGAGGAGT 58.961 52.381 2.00 0.00 0.00 3.85
8314 18850 3.226777 GCTGCTGATAAGGAGAGGAGTA 58.773 50.000 2.00 0.00 0.00 2.59
8315 18851 3.255642 GCTGCTGATAAGGAGAGGAGTAG 59.744 52.174 2.00 0.00 0.00 2.57
8316 18852 3.826157 CTGCTGATAAGGAGAGGAGTAGG 59.174 52.174 0.00 0.00 0.00 3.18
8317 18853 3.205507 TGCTGATAAGGAGAGGAGTAGGT 59.794 47.826 0.00 0.00 0.00 3.08
8318 18854 3.572255 GCTGATAAGGAGAGGAGTAGGTG 59.428 52.174 0.00 0.00 0.00 4.00
8319 18855 4.148838 CTGATAAGGAGAGGAGTAGGTGG 58.851 52.174 0.00 0.00 0.00 4.61
8320 18856 3.792114 TGATAAGGAGAGGAGTAGGTGGA 59.208 47.826 0.00 0.00 0.00 4.02
8321 18857 2.838637 AAGGAGAGGAGTAGGTGGAG 57.161 55.000 0.00 0.00 0.00 3.86
8322 18858 0.260523 AGGAGAGGAGTAGGTGGAGC 59.739 60.000 0.00 0.00 0.00 4.70
8323 18859 0.260523 GGAGAGGAGTAGGTGGAGCT 59.739 60.000 0.00 0.00 0.00 4.09
8324 18860 1.398692 GAGAGGAGTAGGTGGAGCTG 58.601 60.000 0.00 0.00 0.00 4.24
8325 18861 1.003646 AGAGGAGTAGGTGGAGCTGA 58.996 55.000 0.00 0.00 0.00 4.26
8326 18862 1.064017 AGAGGAGTAGGTGGAGCTGAG 60.064 57.143 0.00 0.00 0.00 3.35
8327 18863 0.686112 AGGAGTAGGTGGAGCTGAGC 60.686 60.000 0.00 0.00 0.00 4.26
8328 18864 1.435515 GAGTAGGTGGAGCTGAGCG 59.564 63.158 0.00 0.00 0.00 5.03
8329 18865 2.010582 GAGTAGGTGGAGCTGAGCGG 62.011 65.000 0.00 0.00 0.00 5.52
8330 18866 2.037367 TAGGTGGAGCTGAGCGGT 59.963 61.111 0.00 0.00 0.00 5.68
8331 18867 1.609501 TAGGTGGAGCTGAGCGGTT 60.610 57.895 0.00 0.00 0.00 4.44
8332 18868 1.888436 TAGGTGGAGCTGAGCGGTTG 61.888 60.000 0.00 0.00 0.00 3.77
8333 18869 3.426568 GTGGAGCTGAGCGGTTGC 61.427 66.667 0.00 5.58 43.24 4.17
8354 18890 2.969157 CGTGCAGCAGAGGTATGAG 58.031 57.895 0.00 0.00 0.00 2.90
8355 18891 0.529337 CGTGCAGCAGAGGTATGAGG 60.529 60.000 0.00 0.00 0.00 3.86
8356 18892 0.813210 GTGCAGCAGAGGTATGAGGC 60.813 60.000 0.00 0.00 0.00 4.70
8357 18893 1.593750 GCAGCAGAGGTATGAGGCG 60.594 63.158 0.00 0.00 0.00 5.52
8358 18894 1.068753 CAGCAGAGGTATGAGGCGG 59.931 63.158 0.00 0.00 0.00 6.13
8359 18895 1.381872 AGCAGAGGTATGAGGCGGT 60.382 57.895 0.00 0.00 0.00 5.68
8360 18896 1.227380 GCAGAGGTATGAGGCGGTG 60.227 63.158 0.00 0.00 0.00 4.94
8361 18897 1.227380 CAGAGGTATGAGGCGGTGC 60.227 63.158 0.00 0.00 0.00 5.01
8404 18940 1.227639 CTAGCAGCATCACATCAGGC 58.772 55.000 0.00 0.00 0.00 4.85
8418 18954 2.118513 AGGCTGACGAGTGGGAGT 59.881 61.111 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
93 5372 3.868077 CAGACGGAATCAATCACCTCTTC 59.132 47.826 0.00 0.00 0.00 2.87
95 5374 3.099905 TCAGACGGAATCAATCACCTCT 58.900 45.455 0.00 0.00 0.00 3.69
105 5384 4.209288 CGTGTTGGATAATCAGACGGAATC 59.791 45.833 0.00 0.00 0.00 2.52
106 5385 4.119862 CGTGTTGGATAATCAGACGGAAT 58.880 43.478 0.00 0.00 0.00 3.01
107 5386 3.193903 TCGTGTTGGATAATCAGACGGAA 59.806 43.478 0.00 0.00 0.00 4.30
109 5388 3.116300 CTCGTGTTGGATAATCAGACGG 58.884 50.000 0.00 0.00 0.00 4.79
110 5389 3.770666 ACTCGTGTTGGATAATCAGACG 58.229 45.455 0.00 0.00 0.00 4.18
111 5390 6.132791 TCTACTCGTGTTGGATAATCAGAC 57.867 41.667 0.00 0.00 0.00 3.51
113 5392 7.827819 TTTTCTACTCGTGTTGGATAATCAG 57.172 36.000 0.00 0.00 0.00 2.90
116 5395 8.450964 CACATTTTTCTACTCGTGTTGGATAAT 58.549 33.333 0.00 0.00 0.00 1.28
117 5396 7.094975 CCACATTTTTCTACTCGTGTTGGATAA 60.095 37.037 0.00 0.00 0.00 1.75
118 5397 6.370442 CCACATTTTTCTACTCGTGTTGGATA 59.630 38.462 0.00 0.00 0.00 2.59
119 5398 5.181245 CCACATTTTTCTACTCGTGTTGGAT 59.819 40.000 0.00 0.00 0.00 3.41
120 5399 4.513692 CCACATTTTTCTACTCGTGTTGGA 59.486 41.667 0.00 0.00 0.00 3.53
121 5400 4.783242 CCACATTTTTCTACTCGTGTTGG 58.217 43.478 0.00 0.00 0.00 3.77
122 5401 4.219033 GCCACATTTTTCTACTCGTGTTG 58.781 43.478 0.00 0.00 0.00 3.33
123 5402 3.880490 TGCCACATTTTTCTACTCGTGTT 59.120 39.130 0.00 0.00 0.00 3.32
124 5403 3.472652 TGCCACATTTTTCTACTCGTGT 58.527 40.909 0.00 0.00 0.00 4.49
125 5404 4.685169 ATGCCACATTTTTCTACTCGTG 57.315 40.909 0.00 0.00 0.00 4.35
126 5405 5.351465 CACTATGCCACATTTTTCTACTCGT 59.649 40.000 0.00 0.00 0.00 4.18
127 5406 5.351465 ACACTATGCCACATTTTTCTACTCG 59.649 40.000 0.00 0.00 0.00 4.18
128 5407 6.743575 ACACTATGCCACATTTTTCTACTC 57.256 37.500 0.00 0.00 0.00 2.59
174 5477 9.331282 GGCCTCCATATATGAAATAATACAGAC 57.669 37.037 14.54 0.00 29.06 3.51
175 5478 9.056799 TGGCCTCCATATATGAAATAATACAGA 57.943 33.333 14.54 0.00 29.06 3.41
176 5479 9.113838 GTGGCCTCCATATATGAAATAATACAG 57.886 37.037 14.54 0.00 35.28 2.74
177 5480 8.835734 AGTGGCCTCCATATATGAAATAATACA 58.164 33.333 14.54 0.70 35.28 2.29
181 5484 5.945784 GCAGTGGCCTCCATATATGAAATAA 59.054 40.000 14.54 0.00 35.28 1.40
185 5488 3.423539 GCAGTGGCCTCCATATATGAA 57.576 47.619 14.54 0.00 35.28 2.57
223 5526 8.820831 ACCAATATAGTAAGCTATCAGCAGATT 58.179 33.333 0.00 0.00 45.56 2.40
224 5527 8.372877 ACCAATATAGTAAGCTATCAGCAGAT 57.627 34.615 0.38 0.00 45.56 2.90
225 5528 7.451566 TGACCAATATAGTAAGCTATCAGCAGA 59.548 37.037 0.38 0.00 45.56 4.26
226 5529 7.606349 TGACCAATATAGTAAGCTATCAGCAG 58.394 38.462 0.38 0.00 45.56 4.24
227 5530 7.233553 ACTGACCAATATAGTAAGCTATCAGCA 59.766 37.037 0.38 0.00 45.56 4.41
228 5531 7.607250 ACTGACCAATATAGTAAGCTATCAGC 58.393 38.462 0.00 0.00 42.84 4.26
229 5532 9.416794 CAACTGACCAATATAGTAAGCTATCAG 57.583 37.037 0.00 0.00 38.71 2.90
230 5533 7.872993 GCAACTGACCAATATAGTAAGCTATCA 59.127 37.037 0.00 0.00 38.71 2.15
231 5534 7.872993 TGCAACTGACCAATATAGTAAGCTATC 59.127 37.037 0.00 0.00 38.71 2.08
232 5535 7.735917 TGCAACTGACCAATATAGTAAGCTAT 58.264 34.615 0.00 0.00 40.69 2.97
233 5536 7.119709 TGCAACTGACCAATATAGTAAGCTA 57.880 36.000 0.00 0.00 31.17 3.32
234 5537 5.989477 TGCAACTGACCAATATAGTAAGCT 58.011 37.500 0.00 0.00 31.17 3.74
235 5538 6.867662 ATGCAACTGACCAATATAGTAAGC 57.132 37.500 0.00 0.00 0.00 3.09
236 5539 8.993121 CCTTATGCAACTGACCAATATAGTAAG 58.007 37.037 0.00 0.00 0.00 2.34
237 5540 8.491134 ACCTTATGCAACTGACCAATATAGTAA 58.509 33.333 0.00 0.00 0.00 2.24
238 5541 8.029782 ACCTTATGCAACTGACCAATATAGTA 57.970 34.615 0.00 0.00 0.00 1.82
239 5542 6.900194 ACCTTATGCAACTGACCAATATAGT 58.100 36.000 0.00 0.00 0.00 2.12
240 5543 7.807977 AACCTTATGCAACTGACCAATATAG 57.192 36.000 0.00 0.00 0.00 1.31
258 5579 3.746045 ACGCTTGAGAGTCAAACCTTA 57.254 42.857 0.00 0.00 35.73 2.69
262 5583 4.739195 AGATCTACGCTTGAGAGTCAAAC 58.261 43.478 0.00 0.00 35.73 2.93
277 5598 4.216472 TGTGGTATGCTGATCGAGATCTAC 59.784 45.833 13.47 7.80 38.60 2.59
284 5605 1.775385 TCCTGTGGTATGCTGATCGA 58.225 50.000 0.00 0.00 0.00 3.59
285 5606 2.827800 ATCCTGTGGTATGCTGATCG 57.172 50.000 0.00 0.00 0.00 3.69
286 5607 5.157940 ACATATCCTGTGGTATGCTGATC 57.842 43.478 0.00 0.00 36.48 2.92
287 5608 5.573380 AACATATCCTGTGGTATGCTGAT 57.427 39.130 0.00 0.00 38.39 2.90
530 5851 2.569404 CCTCCTCTGTCCAAGCTAAGTT 59.431 50.000 0.00 0.00 0.00 2.66
531 5852 2.183679 CCTCCTCTGTCCAAGCTAAGT 58.816 52.381 0.00 0.00 0.00 2.24
584 6578 2.688446 CGCCAGTGTTGACCTCTCTATA 59.312 50.000 0.00 0.00 0.00 1.31
585 6579 1.478510 CGCCAGTGTTGACCTCTCTAT 59.521 52.381 0.00 0.00 0.00 1.98
605 6599 1.268999 TGCCACAAACGAAGCAATGAC 60.269 47.619 0.00 0.00 30.97 3.06
670 6664 6.015940 CCCAAAGCTGAAGAAGAAAACTGTAT 60.016 38.462 0.00 0.00 0.00 2.29
672 6666 4.098501 CCCAAAGCTGAAGAAGAAAACTGT 59.901 41.667 0.00 0.00 0.00 3.55
715 6713 5.391950 GCTCGGAACACAAATATCACATTGT 60.392 40.000 0.00 0.00 40.24 2.71
725 6723 1.626654 CGCTCGCTCGGAACACAAAT 61.627 55.000 0.00 0.00 0.00 2.32
758 6757 5.530915 TCCCATGAAATTATTTAGAGGCACG 59.469 40.000 0.00 0.00 0.00 5.34
761 6760 7.308435 CGAATCCCATGAAATTATTTAGAGGC 58.692 38.462 0.00 0.00 0.00 4.70
785 6784 1.216710 GGAGCAACCTCAGAGTCCG 59.783 63.158 0.00 0.00 39.96 4.79
820 6819 1.396301 GAGCAGCCAAAGAACAGATCG 59.604 52.381 0.00 0.00 0.00 3.69
834 6833 5.482686 CTCTTTCTTTATGAAGGAGCAGC 57.517 43.478 6.96 0.00 46.74 5.25
891 6890 8.276252 ACTTAAGACAGAGAAGAGATACACTC 57.724 38.462 10.09 0.00 45.22 3.51
892 6891 7.338449 GGACTTAAGACAGAGAAGAGATACACT 59.662 40.741 10.09 0.00 0.00 3.55
893 6892 7.338449 AGGACTTAAGACAGAGAAGAGATACAC 59.662 40.741 10.09 0.00 0.00 2.90
894 6893 7.406916 AGGACTTAAGACAGAGAAGAGATACA 58.593 38.462 10.09 0.00 0.00 2.29
953 6953 2.551270 AGGTGGATAAGCTCCTGTTGA 58.449 47.619 0.00 0.00 45.21 3.18
999 6999 5.125578 GGATTTACTTGTGAGGAAACCCATC 59.874 44.000 0.00 0.00 39.04 3.51
1007 7007 4.689062 AGGAGAGGATTTACTTGTGAGGA 58.311 43.478 0.00 0.00 0.00 3.71
1009 7009 5.667539 TGAGGAGAGGATTTACTTGTGAG 57.332 43.478 0.00 0.00 0.00 3.51
1018 7018 4.171234 TGAGGAACTTGAGGAGAGGATTT 58.829 43.478 0.00 0.00 41.55 2.17
1019 7019 3.796111 TGAGGAACTTGAGGAGAGGATT 58.204 45.455 0.00 0.00 41.55 3.01
1020 7020 3.481559 TGAGGAACTTGAGGAGAGGAT 57.518 47.619 0.00 0.00 41.55 3.24
1021 7021 3.102972 CATGAGGAACTTGAGGAGAGGA 58.897 50.000 0.00 0.00 41.55 3.71
1022 7022 2.836981 ACATGAGGAACTTGAGGAGAGG 59.163 50.000 0.00 0.00 41.55 3.69
1023 7023 4.550076 AACATGAGGAACTTGAGGAGAG 57.450 45.455 0.00 0.00 41.55 3.20
1024 7024 4.838423 TGTAACATGAGGAACTTGAGGAGA 59.162 41.667 0.00 0.00 41.55 3.71
1025 7025 5.152623 TGTAACATGAGGAACTTGAGGAG 57.847 43.478 0.00 0.00 41.55 3.69
1026 7026 5.762179 ATGTAACATGAGGAACTTGAGGA 57.238 39.130 0.00 0.00 41.55 3.71
1027 7027 5.525378 GCTATGTAACATGAGGAACTTGAGG 59.475 44.000 0.00 0.00 41.55 3.86
1028 7028 6.108687 TGCTATGTAACATGAGGAACTTGAG 58.891 40.000 0.00 0.00 41.55 3.02
1029 7029 6.048732 TGCTATGTAACATGAGGAACTTGA 57.951 37.500 0.00 0.00 41.55 3.02
1030 7030 5.220739 GCTGCTATGTAACATGAGGAACTTG 60.221 44.000 0.00 0.00 41.55 3.16
1031 7031 4.878397 GCTGCTATGTAACATGAGGAACTT 59.122 41.667 0.00 0.00 41.55 2.66
1033 7033 4.446371 AGCTGCTATGTAACATGAGGAAC 58.554 43.478 0.00 0.00 0.00 3.62
1034 7034 4.760530 AGCTGCTATGTAACATGAGGAA 57.239 40.909 0.00 0.00 0.00 3.36
1035 7035 4.039245 GGTAGCTGCTATGTAACATGAGGA 59.961 45.833 13.20 0.00 0.00 3.71
1036 7036 4.310769 GGTAGCTGCTATGTAACATGAGG 58.689 47.826 13.20 0.00 0.00 3.86
1037 7037 3.983988 CGGTAGCTGCTATGTAACATGAG 59.016 47.826 13.20 0.00 0.00 2.90
1038 7038 3.383505 ACGGTAGCTGCTATGTAACATGA 59.616 43.478 13.20 0.00 0.00 3.07
1039 7039 3.717707 ACGGTAGCTGCTATGTAACATG 58.282 45.455 13.20 1.56 0.00 3.21
1040 7040 4.340097 TGTACGGTAGCTGCTATGTAACAT 59.660 41.667 19.63 4.35 0.00 2.71
1041 7041 3.695556 TGTACGGTAGCTGCTATGTAACA 59.304 43.478 19.63 15.53 0.00 2.41
1042 7042 4.297299 TGTACGGTAGCTGCTATGTAAC 57.703 45.455 19.63 13.74 0.00 2.50
1043 7043 4.581409 TGATGTACGGTAGCTGCTATGTAA 59.419 41.667 19.63 13.30 0.00 2.41
1044 7044 4.023450 GTGATGTACGGTAGCTGCTATGTA 60.023 45.833 13.20 15.00 0.00 2.29
1045 7045 2.956333 TGATGTACGGTAGCTGCTATGT 59.044 45.455 13.20 15.95 0.00 2.29
1046 7046 3.004839 AGTGATGTACGGTAGCTGCTATG 59.995 47.826 13.20 11.02 0.00 2.23
1047 7047 3.223435 AGTGATGTACGGTAGCTGCTAT 58.777 45.455 13.20 0.00 0.00 2.97
1048 7048 2.651455 AGTGATGTACGGTAGCTGCTA 58.349 47.619 5.02 5.02 0.00 3.49
1049 7049 1.475403 AGTGATGTACGGTAGCTGCT 58.525 50.000 7.57 7.57 0.00 4.24
1050 7050 2.358267 AGTAGTGATGTACGGTAGCTGC 59.642 50.000 0.00 0.00 0.00 5.25
1051 7051 3.792459 GCAGTAGTGATGTACGGTAGCTG 60.792 52.174 0.42 0.00 0.00 4.24
1052 7052 2.358267 GCAGTAGTGATGTACGGTAGCT 59.642 50.000 0.42 0.00 0.00 3.32
1053 7053 2.358267 AGCAGTAGTGATGTACGGTAGC 59.642 50.000 0.42 0.00 0.00 3.58
1054 7054 4.573607 TGTAGCAGTAGTGATGTACGGTAG 59.426 45.833 0.42 0.00 0.00 3.18
1055 7055 4.333649 GTGTAGCAGTAGTGATGTACGGTA 59.666 45.833 0.42 0.00 0.00 4.02
1056 7056 3.128242 GTGTAGCAGTAGTGATGTACGGT 59.872 47.826 0.42 0.00 0.00 4.83
1057 7057 3.488721 GGTGTAGCAGTAGTGATGTACGG 60.489 52.174 0.42 0.00 0.00 4.02
1058 7058 3.377485 AGGTGTAGCAGTAGTGATGTACG 59.623 47.826 0.42 0.00 0.00 3.67
1059 7059 4.985538 AGGTGTAGCAGTAGTGATGTAC 57.014 45.455 0.42 0.00 0.00 2.90
1060 7060 5.720202 CAAAGGTGTAGCAGTAGTGATGTA 58.280 41.667 0.42 0.00 0.00 2.29
1061 7061 4.569943 CAAAGGTGTAGCAGTAGTGATGT 58.430 43.478 0.42 0.00 0.00 3.06
1062 7062 3.372206 GCAAAGGTGTAGCAGTAGTGATG 59.628 47.826 0.42 0.00 0.00 3.07
1063 7063 3.261897 AGCAAAGGTGTAGCAGTAGTGAT 59.738 43.478 0.42 0.00 0.00 3.06
1064 7064 2.632996 AGCAAAGGTGTAGCAGTAGTGA 59.367 45.455 0.42 0.00 0.00 3.41
1065 7065 3.045601 AGCAAAGGTGTAGCAGTAGTG 57.954 47.619 0.00 0.00 0.00 2.74
1066 7066 4.566987 GTTAGCAAAGGTGTAGCAGTAGT 58.433 43.478 0.00 0.00 0.00 2.73
1067 7067 3.612860 CGTTAGCAAAGGTGTAGCAGTAG 59.387 47.826 0.00 0.00 0.00 2.57
1068 7068 3.581755 CGTTAGCAAAGGTGTAGCAGTA 58.418 45.455 0.00 0.00 0.00 2.74
1069 7069 2.413837 CGTTAGCAAAGGTGTAGCAGT 58.586 47.619 0.00 0.00 0.00 4.40
1070 7070 1.732259 CCGTTAGCAAAGGTGTAGCAG 59.268 52.381 0.00 0.00 0.00 4.24
1071 7071 1.071071 ACCGTTAGCAAAGGTGTAGCA 59.929 47.619 5.89 0.00 36.81 3.49
1072 7072 1.804601 ACCGTTAGCAAAGGTGTAGC 58.195 50.000 5.89 0.00 36.81 3.58
1077 7077 2.061509 AAACCACCGTTAGCAAAGGT 57.938 45.000 1.80 1.80 39.12 3.50
1078 7078 3.446310 AAAAACCACCGTTAGCAAAGG 57.554 42.857 0.00 0.00 0.00 3.11
1135 7296 2.087646 CCAGCTTTAGCAAAGGGAGTC 58.912 52.381 4.33 0.00 45.16 3.36
1136 7297 1.272147 CCCAGCTTTAGCAAAGGGAGT 60.272 52.381 17.07 0.00 46.21 3.85
1137 7298 1.004745 TCCCAGCTTTAGCAAAGGGAG 59.995 52.381 19.34 3.13 46.54 4.30
1138 7299 3.670105 CCCAGCTTTAGCAAAGGGA 57.330 52.632 17.07 0.00 46.21 4.20
1139 7300 1.753073 CATCCCAGCTTTAGCAAAGGG 59.247 52.381 16.29 16.29 45.33 3.95
1140 7301 1.753073 CCATCCCAGCTTTAGCAAAGG 59.247 52.381 4.33 3.08 45.16 3.11
1141 7302 1.753073 CCCATCCCAGCTTTAGCAAAG 59.247 52.381 4.33 0.00 45.16 2.77
1142 7303 1.077005 ACCCATCCCAGCTTTAGCAAA 59.923 47.619 4.33 0.00 45.16 3.68
1143 7304 0.704076 ACCCATCCCAGCTTTAGCAA 59.296 50.000 4.33 0.00 45.16 3.91
1144 7305 0.704076 AACCCATCCCAGCTTTAGCA 59.296 50.000 4.33 0.00 45.16 3.49
1145 7306 1.393603 GAACCCATCCCAGCTTTAGC 58.606 55.000 0.00 0.00 42.49 3.09
1146 7307 2.058593 GGAACCCATCCCAGCTTTAG 57.941 55.000 0.00 0.00 43.00 1.85
1161 7322 5.167303 AGAGGATTTACTTGTGAGGGAAC 57.833 43.478 0.00 0.00 0.00 3.62
1162 7323 4.225267 GGAGAGGATTTACTTGTGAGGGAA 59.775 45.833 0.00 0.00 0.00 3.97
1163 7324 3.775316 GGAGAGGATTTACTTGTGAGGGA 59.225 47.826 0.00 0.00 0.00 4.20
1164 7325 3.777522 AGGAGAGGATTTACTTGTGAGGG 59.222 47.826 0.00 0.00 0.00 4.30
1165 7326 4.467795 TGAGGAGAGGATTTACTTGTGAGG 59.532 45.833 0.00 0.00 0.00 3.86
1166 7327 5.667539 TGAGGAGAGGATTTACTTGTGAG 57.332 43.478 0.00 0.00 0.00 3.51
1167 7328 5.544176 ACTTGAGGAGAGGATTTACTTGTGA 59.456 40.000 0.00 0.00 0.00 3.58
1168 7329 5.799213 ACTTGAGGAGAGGATTTACTTGTG 58.201 41.667 0.00 0.00 0.00 3.33
1169 7330 6.441088 AACTTGAGGAGAGGATTTACTTGT 57.559 37.500 0.00 0.00 0.00 3.16
1170 7331 5.877564 GGAACTTGAGGAGAGGATTTACTTG 59.122 44.000 0.00 0.00 0.00 3.16
1171 7332 5.788014 AGGAACTTGAGGAGAGGATTTACTT 59.212 40.000 0.00 0.00 27.25 2.24
1172 7333 5.346270 AGGAACTTGAGGAGAGGATTTACT 58.654 41.667 0.00 0.00 27.25 2.24
1173 7334 5.187967 TGAGGAACTTGAGGAGAGGATTTAC 59.812 44.000 0.00 0.00 41.55 2.01
1174 7335 5.342017 TGAGGAACTTGAGGAGAGGATTTA 58.658 41.667 0.00 0.00 41.55 1.40
1175 7336 4.171234 TGAGGAACTTGAGGAGAGGATTT 58.829 43.478 0.00 0.00 41.55 2.17
1176 7337 3.796111 TGAGGAACTTGAGGAGAGGATT 58.204 45.455 0.00 0.00 41.55 3.01
1177 7338 3.481559 TGAGGAACTTGAGGAGAGGAT 57.518 47.619 0.00 0.00 41.55 3.24
1178 7339 3.102972 CATGAGGAACTTGAGGAGAGGA 58.897 50.000 0.00 0.00 41.55 3.71
1179 7340 2.836981 ACATGAGGAACTTGAGGAGAGG 59.163 50.000 0.00 0.00 41.55 3.69
1180 7341 4.550076 AACATGAGGAACTTGAGGAGAG 57.450 45.455 0.00 0.00 41.55 3.20
1181 7342 4.838423 TGTAACATGAGGAACTTGAGGAGA 59.162 41.667 0.00 0.00 41.55 3.71
1182 7343 5.152623 TGTAACATGAGGAACTTGAGGAG 57.847 43.478 0.00 0.00 41.55 3.69
1183 7344 5.762179 ATGTAACATGAGGAACTTGAGGA 57.238 39.130 0.00 0.00 41.55 3.71
1184 7345 5.525378 GCTATGTAACATGAGGAACTTGAGG 59.475 44.000 0.00 0.00 41.55 3.86
1185 7346 6.108687 TGCTATGTAACATGAGGAACTTGAG 58.891 40.000 0.00 0.00 41.55 3.02
1186 7347 6.048732 TGCTATGTAACATGAGGAACTTGA 57.951 37.500 0.00 0.00 41.55 3.02
1187 7348 5.220739 GCTGCTATGTAACATGAGGAACTTG 60.221 44.000 0.00 0.00 41.55 3.16
1188 7349 4.878397 GCTGCTATGTAACATGAGGAACTT 59.122 41.667 0.00 0.00 41.55 2.66
1190 7351 4.446371 AGCTGCTATGTAACATGAGGAAC 58.554 43.478 0.00 0.00 0.00 3.62
1191 7352 4.760530 AGCTGCTATGTAACATGAGGAA 57.239 40.909 0.00 0.00 0.00 3.36
1192 7353 4.039245 GGTAGCTGCTATGTAACATGAGGA 59.961 45.833 13.20 0.00 0.00 3.71
1193 7354 4.310769 GGTAGCTGCTATGTAACATGAGG 58.689 47.826 13.20 0.00 0.00 3.86
1194 7355 3.983988 CGGTAGCTGCTATGTAACATGAG 59.016 47.826 13.20 0.00 0.00 2.90
1195 7356 3.383505 ACGGTAGCTGCTATGTAACATGA 59.616 43.478 13.20 0.00 0.00 3.07
1196 7357 3.717707 ACGGTAGCTGCTATGTAACATG 58.282 45.455 13.20 1.56 0.00 3.21
1197 7358 4.340097 TGTACGGTAGCTGCTATGTAACAT 59.660 41.667 19.63 4.35 0.00 2.71
1198 7359 3.695556 TGTACGGTAGCTGCTATGTAACA 59.304 43.478 19.63 15.53 0.00 2.41
1199 7360 4.297299 TGTACGGTAGCTGCTATGTAAC 57.703 45.455 19.63 13.74 0.00 2.50
1200 7361 4.581409 TGATGTACGGTAGCTGCTATGTAA 59.419 41.667 19.63 13.30 0.00 2.41
1201 7362 4.023450 GTGATGTACGGTAGCTGCTATGTA 60.023 45.833 13.20 15.00 0.00 2.29
1202 7363 2.956333 TGATGTACGGTAGCTGCTATGT 59.044 45.455 13.20 15.95 0.00 2.29
1203 7364 3.004839 AGTGATGTACGGTAGCTGCTATG 59.995 47.826 13.20 11.02 0.00 2.23
1204 7365 3.223435 AGTGATGTACGGTAGCTGCTAT 58.777 45.455 13.20 0.00 0.00 2.97
1205 7366 2.651455 AGTGATGTACGGTAGCTGCTA 58.349 47.619 5.02 5.02 0.00 3.49
1206 7367 1.475403 AGTGATGTACGGTAGCTGCT 58.525 50.000 7.57 7.57 0.00 4.24
1207 7368 2.358267 AGTAGTGATGTACGGTAGCTGC 59.642 50.000 0.00 0.00 0.00 5.25
1208 7369 3.792459 GCAGTAGTGATGTACGGTAGCTG 60.792 52.174 0.42 0.00 0.00 4.24
1209 7370 2.358267 GCAGTAGTGATGTACGGTAGCT 59.642 50.000 0.42 0.00 0.00 3.32
1210 7371 2.358267 AGCAGTAGTGATGTACGGTAGC 59.642 50.000 0.42 0.00 0.00 3.58
1211 7372 4.573607 TGTAGCAGTAGTGATGTACGGTAG 59.426 45.833 0.42 0.00 0.00 3.18
1212 7373 4.333649 GTGTAGCAGTAGTGATGTACGGTA 59.666 45.833 0.42 0.00 0.00 4.02
1213 7374 3.128242 GTGTAGCAGTAGTGATGTACGGT 59.872 47.826 0.42 0.00 0.00 4.83
1214 7375 3.488721 GGTGTAGCAGTAGTGATGTACGG 60.489 52.174 0.42 0.00 0.00 4.02
1215 7376 3.377485 AGGTGTAGCAGTAGTGATGTACG 59.623 47.826 0.42 0.00 0.00 3.67
1216 7377 4.985538 AGGTGTAGCAGTAGTGATGTAC 57.014 45.455 0.42 0.00 0.00 2.90
1217 7378 5.720202 CAAAGGTGTAGCAGTAGTGATGTA 58.280 41.667 0.42 0.00 0.00 2.29
1226 7387 2.413837 CGTTAGCAAAGGTGTAGCAGT 58.586 47.619 0.00 0.00 0.00 4.40
1261 7425 1.139947 GAGTCAGCTACCTCACCGC 59.860 63.158 6.88 0.00 0.00 5.68
1264 7428 2.682856 CTCTCAGAGTCAGCTACCTCAC 59.317 54.545 12.80 0.00 0.00 3.51
1265 7429 2.307392 ACTCTCAGAGTCAGCTACCTCA 59.693 50.000 0.00 0.00 38.71 3.86
1380 7544 1.901591 AGTGGCATGTCTTTGTCCTG 58.098 50.000 0.00 0.00 0.00 3.86
1436 7600 3.777106 TTCAGCTTCTCCATGAACACT 57.223 42.857 0.00 0.00 0.00 3.55
1437 7601 3.427233 GCATTCAGCTTCTCCATGAACAC 60.427 47.826 0.00 0.00 41.15 3.32
1475 7639 3.047280 GATGGTGCGGCGTGTGAA 61.047 61.111 9.37 0.00 0.00 3.18
1537 7701 0.242017 CAAAGCAAAGAAGCCCGAGG 59.758 55.000 0.00 0.00 34.23 4.63
1544 7708 3.722728 ACCTTGAGCAAAGCAAAGAAG 57.277 42.857 6.16 0.00 34.24 2.85
1617 7781 5.601583 TGTTTAAAGTTCCCTTTCCCAAC 57.398 39.130 0.00 0.00 41.18 3.77
1630 7794 5.954335 GCACATAGCCTTCATGTTTAAAGT 58.046 37.500 0.00 0.00 34.39 2.66
1670 7834 2.095617 CGATTCACAGCATTTGCAGACA 60.096 45.455 5.20 0.00 45.16 3.41
1919 8083 4.280174 ACCGCATCGTATAGAATTACCAGT 59.720 41.667 0.00 0.00 0.00 4.00
1924 8088 3.991773 GCCAACCGCATCGTATAGAATTA 59.008 43.478 0.00 0.00 37.47 1.40
2228 8392 2.556287 GCTGCCGAAACCAGAACG 59.444 61.111 0.00 0.00 32.03 3.95
2283 8447 2.304180 AGGTGAAGACACTGCTAGCATT 59.696 45.455 19.72 10.33 45.32 3.56
2449 8613 3.900601 AGGGTAATCAATGCCAACACAAA 59.099 39.130 0.00 0.00 35.05 2.83
2452 8616 5.048713 GCTATAGGGTAATCAATGCCAACAC 60.049 44.000 1.04 0.00 35.05 3.32
2703 8890 7.792374 TGCTTGTCAACAGGATATATTTCTC 57.208 36.000 0.00 0.00 0.00 2.87
3005 9234 3.498397 GGTACAATCTCCATATGGCAACG 59.502 47.826 17.58 6.66 42.51 4.10
3330 9560 5.561679 GAAGTGGAGAGAGGTACCAAAATT 58.438 41.667 15.94 0.00 35.40 1.82
3639 9884 7.283354 CACAGACTCTGTATATCTACTTCCACA 59.717 40.741 11.47 0.00 43.43 4.17
3640 9885 7.499563 TCACAGACTCTGTATATCTACTTCCAC 59.500 40.741 11.47 0.00 43.43 4.02
3866 10117 8.594881 AGACAGAAATTAACTTCAGTGTACTG 57.405 34.615 0.00 5.67 45.08 2.74
3890 10141 7.477144 TGTGCAAACTCCGATAATAATGTAG 57.523 36.000 0.00 0.00 0.00 2.74
3931 10182 7.639113 AGAACAACAACCACAAAAGATCTTA 57.361 32.000 8.75 0.00 0.00 2.10
4404 10671 3.007635 ACTAGCGTTGGATGGCTAAAAC 58.992 45.455 0.00 0.00 40.90 2.43
4439 10706 4.489841 GCAGTTAGAAAATTCGTACGTCCG 60.490 45.833 16.05 0.00 0.00 4.79
4446 10713 3.000727 CTCCCGCAGTTAGAAAATTCGT 58.999 45.455 0.00 0.00 0.00 3.85
4454 10721 0.036388 CCAAAGCTCCCGCAGTTAGA 60.036 55.000 0.00 0.00 39.10 2.10
4556 10839 4.767255 GACTGGGCCAGGCAGACG 62.767 72.222 34.60 10.04 39.71 4.18
4617 10900 0.945265 CAAACATGCCCGCAAACAGG 60.945 55.000 0.00 0.00 0.00 4.00
4650 10933 6.661777 TCACCTAATGGACATCATCAAATGA 58.338 36.000 0.00 0.00 39.31 2.57
4801 11170 1.609208 ACCTCTGCATGACCAAACAC 58.391 50.000 0.00 0.00 0.00 3.32
5260 13081 2.710377 ACTTCGGCACATGAGCATTAA 58.290 42.857 17.11 6.65 35.83 1.40
5730 13574 3.755378 CCAATCTTGTCTCCACCTTCAAG 59.245 47.826 0.00 0.00 38.69 3.02
5744 13588 6.017934 CCATTCGACCAACTATACCAATCTTG 60.018 42.308 0.00 0.00 0.00 3.02
5767 13611 0.817634 CGTTGTCTTGCCACTTCCCA 60.818 55.000 0.00 0.00 0.00 4.37
5951 13795 5.012239 TGTTGATCTGAGAATTTCCCAAGG 58.988 41.667 0.00 0.00 0.00 3.61
5958 13802 8.827832 TCCCATATTTGTTGATCTGAGAATTT 57.172 30.769 0.00 0.00 0.00 1.82
6066 13922 5.473504 ACCAATAAACACACATCAGGTTCTC 59.526 40.000 0.00 0.00 0.00 2.87
6089 13945 5.348986 TGCGAGGACTAACTCATGATTAAC 58.651 41.667 0.00 0.00 37.34 2.01
6102 13987 1.201647 GCAACAGTACTGCGAGGACTA 59.798 52.381 22.90 0.00 0.00 2.59
6239 14439 5.438833 TCTAGTTCCTCTTAGCCAGTCTAC 58.561 45.833 0.00 0.00 0.00 2.59
6244 14444 9.620259 AAAATTTATCTAGTTCCTCTTAGCCAG 57.380 33.333 0.00 0.00 0.00 4.85
6320 16598 7.931275 AGAACCAAAAGTCTAAACTGATGAAC 58.069 34.615 0.00 0.00 35.36 3.18
6341 16619 5.531287 AGTTTCATGAACCAACCACTAGAAC 59.469 40.000 7.89 0.00 39.13 3.01
6458 16744 2.334977 TGAGAAAGTGGGACCTAAGCA 58.665 47.619 0.00 0.00 0.00 3.91
6656 17066 6.151985 TGTTTGCCCATGTTATTAGTTTCGAT 59.848 34.615 0.00 0.00 0.00 3.59
6748 17172 7.941238 AGAATACGCCTAGGACTAATAACAGTA 59.059 37.037 14.75 0.12 0.00 2.74
6779 17205 0.107643 GCCTGCACCCTCCTCTATTC 59.892 60.000 0.00 0.00 0.00 1.75
7233 17729 9.489084 TTCATATTGATTAGTTCGGGTCAATAG 57.511 33.333 11.01 5.53 43.05 1.73
7402 17908 1.884579 GACCAGTACTCGTTGACCAGA 59.115 52.381 0.00 0.00 0.00 3.86
7474 17981 0.522180 CTCTTGGAAAGCTGCAGCAG 59.478 55.000 38.24 25.49 45.70 4.24
7651 18183 4.687215 GAGCAGCGGCAGTCCACA 62.687 66.667 12.44 0.00 44.61 4.17
8054 18589 2.375174 TCATGGGCCAATAGGGATACAC 59.625 50.000 11.89 0.00 40.01 2.90
8151 18687 0.390866 AGCAACAGCTCGATGGTGAG 60.391 55.000 8.24 7.32 46.27 3.51
8152 18688 0.671472 CAGCAACAGCTCGATGGTGA 60.671 55.000 8.24 0.00 45.78 4.02
8154 18690 1.376424 CCAGCAACAGCTCGATGGT 60.376 57.895 3.89 0.00 36.19 3.55
8155 18691 0.108186 TACCAGCAACAGCTCGATGG 60.108 55.000 9.48 9.48 36.19 3.51
8156 18692 1.596260 CATACCAGCAACAGCTCGATG 59.404 52.381 0.00 0.00 36.19 3.84
8157 18693 1.208052 ACATACCAGCAACAGCTCGAT 59.792 47.619 0.00 0.00 36.19 3.59
8158 18694 0.608130 ACATACCAGCAACAGCTCGA 59.392 50.000 0.00 0.00 36.19 4.04
8159 18695 1.002366 GACATACCAGCAACAGCTCG 58.998 55.000 0.00 0.00 36.19 5.03
8160 18696 2.275318 GAGACATACCAGCAACAGCTC 58.725 52.381 0.00 0.00 36.19 4.09
8161 18697 1.065854 GGAGACATACCAGCAACAGCT 60.066 52.381 0.00 0.00 39.75 4.24
8162 18698 1.065854 AGGAGACATACCAGCAACAGC 60.066 52.381 0.00 0.00 0.00 4.40
8163 18699 2.499289 AGAGGAGACATACCAGCAACAG 59.501 50.000 0.00 0.00 0.00 3.16
8164 18700 2.497675 GAGAGGAGACATACCAGCAACA 59.502 50.000 0.00 0.00 0.00 3.33
8165 18701 2.497675 TGAGAGGAGACATACCAGCAAC 59.502 50.000 0.00 0.00 0.00 4.17
8166 18702 2.497675 GTGAGAGGAGACATACCAGCAA 59.502 50.000 0.00 0.00 0.00 3.91
8167 18703 2.103373 GTGAGAGGAGACATACCAGCA 58.897 52.381 0.00 0.00 0.00 4.41
8168 18704 2.100584 CTGTGAGAGGAGACATACCAGC 59.899 54.545 0.00 0.00 0.00 4.85
8169 18705 2.100584 GCTGTGAGAGGAGACATACCAG 59.899 54.545 0.00 0.00 0.00 4.00
8170 18706 2.103373 GCTGTGAGAGGAGACATACCA 58.897 52.381 0.00 0.00 0.00 3.25
8171 18707 2.103373 TGCTGTGAGAGGAGACATACC 58.897 52.381 0.00 0.00 0.00 2.73
8172 18708 3.492309 CCATGCTGTGAGAGGAGACATAC 60.492 52.174 0.00 0.00 0.00 2.39
8173 18709 2.697229 CCATGCTGTGAGAGGAGACATA 59.303 50.000 0.00 0.00 0.00 2.29
8174 18710 1.485480 CCATGCTGTGAGAGGAGACAT 59.515 52.381 0.00 0.00 0.00 3.06
8175 18711 0.900421 CCATGCTGTGAGAGGAGACA 59.100 55.000 0.00 0.00 0.00 3.41
8176 18712 0.901124 ACCATGCTGTGAGAGGAGAC 59.099 55.000 0.00 0.00 0.00 3.36
8177 18713 2.532250 TACCATGCTGTGAGAGGAGA 57.468 50.000 0.00 0.00 0.00 3.71
8178 18714 2.288091 CGATACCATGCTGTGAGAGGAG 60.288 54.545 0.00 0.00 0.00 3.69
8179 18715 1.683385 CGATACCATGCTGTGAGAGGA 59.317 52.381 0.00 0.00 0.00 3.71
8180 18716 1.683385 TCGATACCATGCTGTGAGAGG 59.317 52.381 0.00 0.00 0.00 3.69
8181 18717 2.544694 GGTCGATACCATGCTGTGAGAG 60.545 54.545 0.00 0.00 45.98 3.20
8182 18718 1.409064 GGTCGATACCATGCTGTGAGA 59.591 52.381 0.00 0.00 45.98 3.27
8183 18719 1.858091 GGTCGATACCATGCTGTGAG 58.142 55.000 0.00 0.00 45.98 3.51
8193 18729 1.285023 CGATGACCCGGTCGATACC 59.715 63.158 13.02 0.00 42.95 2.73
8194 18730 1.285023 CCGATGACCCGGTCGATAC 59.715 63.158 13.27 3.55 44.23 2.24
8195 18731 3.754068 CCGATGACCCGGTCGATA 58.246 61.111 13.27 0.00 44.23 2.92
8213 18749 4.640855 ACTCCACACACGTCCGCG 62.641 66.667 0.00 0.00 44.93 6.46
8214 18750 3.036084 CACTCCACACACGTCCGC 61.036 66.667 0.00 0.00 0.00 5.54
8215 18751 2.355837 CCACTCCACACACGTCCG 60.356 66.667 0.00 0.00 0.00 4.79
8216 18752 2.665185 GCCACTCCACACACGTCC 60.665 66.667 0.00 0.00 0.00 4.79
8217 18753 1.956170 CTGCCACTCCACACACGTC 60.956 63.158 0.00 0.00 0.00 4.34
8218 18754 2.108976 CTGCCACTCCACACACGT 59.891 61.111 0.00 0.00 0.00 4.49
8219 18755 3.349006 GCTGCCACTCCACACACG 61.349 66.667 0.00 0.00 0.00 4.49
8220 18756 2.111878 AGCTGCCACTCCACACAC 59.888 61.111 0.00 0.00 0.00 3.82
8221 18757 2.111669 CAGCTGCCACTCCACACA 59.888 61.111 0.00 0.00 0.00 3.72
8222 18758 2.111878 ACAGCTGCCACTCCACAC 59.888 61.111 15.27 0.00 0.00 3.82
8223 18759 2.111669 CACAGCTGCCACTCCACA 59.888 61.111 15.27 0.00 0.00 4.17
8224 18760 3.360340 GCACAGCTGCCACTCCAC 61.360 66.667 15.27 0.00 37.45 4.02
8225 18761 4.994471 CGCACAGCTGCCACTCCA 62.994 66.667 15.27 0.00 40.73 3.86
8226 18762 4.687215 TCGCACAGCTGCCACTCC 62.687 66.667 15.27 0.00 40.73 3.85
8227 18763 3.418068 GTCGCACAGCTGCCACTC 61.418 66.667 15.27 0.00 40.73 3.51
8235 18771 4.796231 ATCGTCCCGTCGCACAGC 62.796 66.667 0.00 0.00 0.00 4.40
8236 18772 2.880879 CATCGTCCCGTCGCACAG 60.881 66.667 0.00 0.00 0.00 3.66
8237 18773 4.429212 CCATCGTCCCGTCGCACA 62.429 66.667 0.00 0.00 0.00 4.57
8260 18796 4.388499 TTCTCGCCGGAACCAGCC 62.388 66.667 5.05 0.00 0.00 4.85
8261 18797 2.815647 CTTCTCGCCGGAACCAGC 60.816 66.667 5.05 0.00 0.00 4.85
8262 18798 2.125512 CCTTCTCGCCGGAACCAG 60.126 66.667 5.05 0.00 0.00 4.00
8263 18799 2.920912 ACCTTCTCGCCGGAACCA 60.921 61.111 5.05 0.00 0.00 3.67
8264 18800 2.434359 CACCTTCTCGCCGGAACC 60.434 66.667 5.05 0.00 0.00 3.62
8265 18801 2.434359 CCACCTTCTCGCCGGAAC 60.434 66.667 5.05 0.00 0.00 3.62
8266 18802 2.602267 TCCACCTTCTCGCCGGAA 60.602 61.111 5.05 0.00 0.00 4.30
8267 18803 3.068691 CTCCACCTTCTCGCCGGA 61.069 66.667 5.05 0.00 0.00 5.14
8268 18804 4.821589 GCTCCACCTTCTCGCCGG 62.822 72.222 0.00 0.00 0.00 6.13
8269 18805 3.764466 AGCTCCACCTTCTCGCCG 61.764 66.667 0.00 0.00 0.00 6.46
8270 18806 2.125350 CAGCTCCACCTTCTCGCC 60.125 66.667 0.00 0.00 0.00 5.54
8271 18807 2.817396 GCAGCTCCACCTTCTCGC 60.817 66.667 0.00 0.00 0.00 5.03
8272 18808 2.507992 CGCAGCTCCACCTTCTCG 60.508 66.667 0.00 0.00 0.00 4.04
8273 18809 2.125350 CCGCAGCTCCACCTTCTC 60.125 66.667 0.00 0.00 0.00 2.87
8274 18810 2.520536 AACCGCAGCTCCACCTTCT 61.521 57.895 0.00 0.00 0.00 2.85
8275 18811 2.032681 AACCGCAGCTCCACCTTC 59.967 61.111 0.00 0.00 0.00 3.46
8276 18812 2.281761 CAACCGCAGCTCCACCTT 60.282 61.111 0.00 0.00 0.00 3.50
8279 18815 3.730761 CAGCAACCGCAGCTCCAC 61.731 66.667 0.00 0.00 41.14 4.02
8285 18821 0.376152 CTTATCAGCAGCAACCGCAG 59.624 55.000 0.00 0.00 42.27 5.18
8286 18822 1.026182 CCTTATCAGCAGCAACCGCA 61.026 55.000 0.00 0.00 42.27 5.69
8287 18823 0.744414 TCCTTATCAGCAGCAACCGC 60.744 55.000 0.00 0.00 38.99 5.68
8288 18824 1.134699 TCTCCTTATCAGCAGCAACCG 60.135 52.381 0.00 0.00 0.00 4.44
8289 18825 2.559440 CTCTCCTTATCAGCAGCAACC 58.441 52.381 0.00 0.00 0.00 3.77
8290 18826 2.169352 TCCTCTCCTTATCAGCAGCAAC 59.831 50.000 0.00 0.00 0.00 4.17
8291 18827 2.433604 CTCCTCTCCTTATCAGCAGCAA 59.566 50.000 0.00 0.00 0.00 3.91
8292 18828 2.037901 CTCCTCTCCTTATCAGCAGCA 58.962 52.381 0.00 0.00 0.00 4.41
8293 18829 2.038659 ACTCCTCTCCTTATCAGCAGC 58.961 52.381 0.00 0.00 0.00 5.25
8294 18830 3.826157 CCTACTCCTCTCCTTATCAGCAG 59.174 52.174 0.00 0.00 0.00 4.24
8295 18831 3.205507 ACCTACTCCTCTCCTTATCAGCA 59.794 47.826 0.00 0.00 0.00 4.41
8296 18832 3.572255 CACCTACTCCTCTCCTTATCAGC 59.428 52.174 0.00 0.00 0.00 4.26
8297 18833 4.141135 TCCACCTACTCCTCTCCTTATCAG 60.141 50.000 0.00 0.00 0.00 2.90
8298 18834 3.792114 TCCACCTACTCCTCTCCTTATCA 59.208 47.826 0.00 0.00 0.00 2.15
8299 18835 4.403734 CTCCACCTACTCCTCTCCTTATC 58.596 52.174 0.00 0.00 0.00 1.75
8300 18836 3.437344 GCTCCACCTACTCCTCTCCTTAT 60.437 52.174 0.00 0.00 0.00 1.73
8301 18837 2.091775 GCTCCACCTACTCCTCTCCTTA 60.092 54.545 0.00 0.00 0.00 2.69
8302 18838 1.342574 GCTCCACCTACTCCTCTCCTT 60.343 57.143 0.00 0.00 0.00 3.36
8303 18839 0.260523 GCTCCACCTACTCCTCTCCT 59.739 60.000 0.00 0.00 0.00 3.69
8304 18840 0.260523 AGCTCCACCTACTCCTCTCC 59.739 60.000 0.00 0.00 0.00 3.71
8305 18841 1.064314 TCAGCTCCACCTACTCCTCTC 60.064 57.143 0.00 0.00 0.00 3.20
8306 18842 1.003646 TCAGCTCCACCTACTCCTCT 58.996 55.000 0.00 0.00 0.00 3.69
8307 18843 1.398692 CTCAGCTCCACCTACTCCTC 58.601 60.000 0.00 0.00 0.00 3.71
8308 18844 0.686112 GCTCAGCTCCACCTACTCCT 60.686 60.000 0.00 0.00 0.00 3.69
8309 18845 1.819905 GCTCAGCTCCACCTACTCC 59.180 63.158 0.00 0.00 0.00 3.85
8310 18846 1.435515 CGCTCAGCTCCACCTACTC 59.564 63.158 0.00 0.00 0.00 2.59
8311 18847 2.055042 CCGCTCAGCTCCACCTACT 61.055 63.158 0.00 0.00 0.00 2.57
8312 18848 1.889530 AACCGCTCAGCTCCACCTAC 61.890 60.000 0.00 0.00 0.00 3.18
8313 18849 1.609501 AACCGCTCAGCTCCACCTA 60.610 57.895 0.00 0.00 0.00 3.08
8314 18850 2.925170 AACCGCTCAGCTCCACCT 60.925 61.111 0.00 0.00 0.00 4.00
8315 18851 2.743928 CAACCGCTCAGCTCCACC 60.744 66.667 0.00 0.00 0.00 4.61
8316 18852 3.426568 GCAACCGCTCAGCTCCAC 61.427 66.667 0.00 0.00 34.30 4.02
8335 18871 1.150567 CTCATACCTCTGCTGCACGC 61.151 60.000 0.00 1.70 39.77 5.34
8336 18872 0.529337 CCTCATACCTCTGCTGCACG 60.529 60.000 0.00 0.00 0.00 5.34
8337 18873 0.813210 GCCTCATACCTCTGCTGCAC 60.813 60.000 0.00 0.00 0.00 4.57
8338 18874 1.524002 GCCTCATACCTCTGCTGCA 59.476 57.895 0.88 0.88 0.00 4.41
8339 18875 1.593750 CGCCTCATACCTCTGCTGC 60.594 63.158 0.00 0.00 0.00 5.25
8340 18876 1.068753 CCGCCTCATACCTCTGCTG 59.931 63.158 0.00 0.00 0.00 4.41
8341 18877 1.381872 ACCGCCTCATACCTCTGCT 60.382 57.895 0.00 0.00 0.00 4.24
8342 18878 1.227380 CACCGCCTCATACCTCTGC 60.227 63.158 0.00 0.00 0.00 4.26
8343 18879 1.227380 GCACCGCCTCATACCTCTG 60.227 63.158 0.00 0.00 0.00 3.35
8344 18880 2.435693 GGCACCGCCTCATACCTCT 61.436 63.158 0.00 0.00 46.69 3.69
8345 18881 2.109181 GGCACCGCCTCATACCTC 59.891 66.667 0.00 0.00 46.69 3.85
8356 18892 2.829043 TAGTAGCAGCAACGGCACCG 62.829 60.000 7.71 7.71 44.61 4.94
8357 18893 1.079405 TAGTAGCAGCAACGGCACC 60.079 57.895 0.00 0.00 44.61 5.01
8358 18894 0.108804 TCTAGTAGCAGCAACGGCAC 60.109 55.000 0.00 0.00 44.61 5.01
8359 18895 0.606096 TTCTAGTAGCAGCAACGGCA 59.394 50.000 0.00 0.00 44.61 5.69
8360 18896 1.722011 TTTCTAGTAGCAGCAACGGC 58.278 50.000 0.00 0.00 41.61 5.68
8361 18897 6.924060 AGTATTATTTCTAGTAGCAGCAACGG 59.076 38.462 0.00 0.00 0.00 4.44
8362 18898 7.932120 AGTATTATTTCTAGTAGCAGCAACG 57.068 36.000 0.00 0.00 0.00 4.10
8363 18899 8.917655 GCTAGTATTATTTCTAGTAGCAGCAAC 58.082 37.037 10.73 0.00 43.21 4.17
8404 18940 0.039074 GTGTGACTCCCACTCGTCAG 60.039 60.000 0.00 0.00 45.86 3.51
8418 18954 0.179020 CTGGTTCAGCCCAAGTGTGA 60.179 55.000 0.00 0.00 33.07 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.