Multiple sequence alignment - TraesCS7D01G113000
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G113000 | chr7D | 100.000 | 2523 | 0 | 0 | 1 | 2523 | 69202502 | 69199980 | 0.000000e+00 | 4660 |
1 | TraesCS7D01G113000 | chr7D | 94.364 | 1863 | 69 | 15 | 535 | 2379 | 503923852 | 503925696 | 0.000000e+00 | 2826 |
2 | TraesCS7D01G113000 | chr7D | 93.980 | 1661 | 54 | 14 | 532 | 2172 | 629661719 | 629660085 | 0.000000e+00 | 2471 |
3 | TraesCS7D01G113000 | chr7D | 95.807 | 1264 | 43 | 5 | 1092 | 2348 | 4429142 | 4430402 | 0.000000e+00 | 2032 |
4 | TraesCS7D01G113000 | chr7D | 95.012 | 1203 | 51 | 9 | 1180 | 2379 | 564083084 | 564084280 | 0.000000e+00 | 1881 |
5 | TraesCS7D01G113000 | chr7D | 89.858 | 493 | 18 | 2 | 528 | 1003 | 4428280 | 4428757 | 2.780000e-169 | 604 |
6 | TraesCS7D01G113000 | chr7D | 97.260 | 73 | 2 | 0 | 5 | 77 | 69074279 | 69074207 | 9.480000e-25 | 124 |
7 | TraesCS7D01G113000 | chr5D | 94.948 | 1841 | 68 | 13 | 527 | 2348 | 435154597 | 435156431 | 0.000000e+00 | 2861 |
8 | TraesCS7D01G113000 | chr5D | 93.414 | 1397 | 58 | 14 | 533 | 1911 | 124541032 | 124539652 | 0.000000e+00 | 2039 |
9 | TraesCS7D01G113000 | chr5D | 93.740 | 1278 | 45 | 9 | 533 | 1790 | 565841270 | 565842532 | 0.000000e+00 | 1884 |
10 | TraesCS7D01G113000 | chr1D | 94.789 | 1823 | 71 | 12 | 544 | 2348 | 22594392 | 22592576 | 0.000000e+00 | 2819 |
11 | TraesCS7D01G113000 | chr1D | 93.525 | 278 | 18 | 0 | 536 | 813 | 476789518 | 476789241 | 5.020000e-112 | 414 |
12 | TraesCS7D01G113000 | chr1D | 96.753 | 154 | 5 | 0 | 2370 | 2523 | 319300193 | 319300346 | 8.950000e-65 | 257 |
13 | TraesCS7D01G113000 | chr3D | 94.688 | 1826 | 78 | 4 | 541 | 2348 | 70093975 | 70095799 | 0.000000e+00 | 2817 |
14 | TraesCS7D01G113000 | chr3D | 91.967 | 722 | 25 | 7 | 536 | 1240 | 590028812 | 590029517 | 0.000000e+00 | 981 |
15 | TraesCS7D01G113000 | chr3D | 97.403 | 154 | 2 | 2 | 2372 | 2523 | 175367777 | 175367624 | 6.920000e-66 | 261 |
16 | TraesCS7D01G113000 | chr3D | 94.083 | 169 | 7 | 2 | 2356 | 2523 | 91770324 | 91770158 | 1.160000e-63 | 254 |
17 | TraesCS7D01G113000 | chr3D | 93.939 | 165 | 8 | 2 | 2360 | 2523 | 514057990 | 514058153 | 5.390000e-62 | 248 |
18 | TraesCS7D01G113000 | chr7A | 93.969 | 1824 | 86 | 13 | 544 | 2348 | 668988053 | 668986235 | 0.000000e+00 | 2737 |
19 | TraesCS7D01G113000 | chr7A | 91.210 | 1661 | 99 | 24 | 523 | 2172 | 695378930 | 695380554 | 0.000000e+00 | 2215 |
20 | TraesCS7D01G113000 | chr7A | 92.523 | 535 | 36 | 2 | 5 | 539 | 74931419 | 74930889 | 0.000000e+00 | 763 |
21 | TraesCS7D01G113000 | chr7A | 93.023 | 172 | 9 | 3 | 2353 | 2523 | 192598758 | 192598589 | 5.390000e-62 | 248 |
22 | TraesCS7D01G113000 | chr3A | 93.555 | 1831 | 91 | 6 | 536 | 2348 | 699108759 | 699110580 | 0.000000e+00 | 2702 |
23 | TraesCS7D01G113000 | chr5A | 92.787 | 1636 | 82 | 10 | 732 | 2348 | 639271975 | 639270357 | 0.000000e+00 | 2335 |
24 | TraesCS7D01G113000 | chr5A | 93.939 | 165 | 8 | 2 | 2360 | 2523 | 578809100 | 578809263 | 5.390000e-62 | 248 |
25 | TraesCS7D01G113000 | chr7B | 84.030 | 526 | 76 | 5 | 4 | 528 | 11022680 | 11022162 | 1.350000e-137 | 499 |
26 | TraesCS7D01G113000 | chr4D | 95.625 | 160 | 3 | 4 | 2367 | 2523 | 28948632 | 28948790 | 1.160000e-63 | 254 |
27 | TraesCS7D01G113000 | chr1A | 94.545 | 165 | 4 | 5 | 2362 | 2523 | 345413373 | 345413211 | 1.500000e-62 | 250 |
28 | TraesCS7D01G113000 | chr1B | 90.811 | 185 | 10 | 7 | 2341 | 2523 | 477993282 | 477993461 | 9.020000e-60 | 241 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G113000 | chr7D | 69199980 | 69202502 | 2522 | True | 4660 | 4660 | 100.0000 | 1 | 2523 | 1 | chr7D.!!$R2 | 2522 |
1 | TraesCS7D01G113000 | chr7D | 503923852 | 503925696 | 1844 | False | 2826 | 2826 | 94.3640 | 535 | 2379 | 1 | chr7D.!!$F1 | 1844 |
2 | TraesCS7D01G113000 | chr7D | 629660085 | 629661719 | 1634 | True | 2471 | 2471 | 93.9800 | 532 | 2172 | 1 | chr7D.!!$R3 | 1640 |
3 | TraesCS7D01G113000 | chr7D | 564083084 | 564084280 | 1196 | False | 1881 | 1881 | 95.0120 | 1180 | 2379 | 1 | chr7D.!!$F2 | 1199 |
4 | TraesCS7D01G113000 | chr7D | 4428280 | 4430402 | 2122 | False | 1318 | 2032 | 92.8325 | 528 | 2348 | 2 | chr7D.!!$F3 | 1820 |
5 | TraesCS7D01G113000 | chr5D | 435154597 | 435156431 | 1834 | False | 2861 | 2861 | 94.9480 | 527 | 2348 | 1 | chr5D.!!$F1 | 1821 |
6 | TraesCS7D01G113000 | chr5D | 124539652 | 124541032 | 1380 | True | 2039 | 2039 | 93.4140 | 533 | 1911 | 1 | chr5D.!!$R1 | 1378 |
7 | TraesCS7D01G113000 | chr5D | 565841270 | 565842532 | 1262 | False | 1884 | 1884 | 93.7400 | 533 | 1790 | 1 | chr5D.!!$F2 | 1257 |
8 | TraesCS7D01G113000 | chr1D | 22592576 | 22594392 | 1816 | True | 2819 | 2819 | 94.7890 | 544 | 2348 | 1 | chr1D.!!$R1 | 1804 |
9 | TraesCS7D01G113000 | chr3D | 70093975 | 70095799 | 1824 | False | 2817 | 2817 | 94.6880 | 541 | 2348 | 1 | chr3D.!!$F1 | 1807 |
10 | TraesCS7D01G113000 | chr3D | 590028812 | 590029517 | 705 | False | 981 | 981 | 91.9670 | 536 | 1240 | 1 | chr3D.!!$F3 | 704 |
11 | TraesCS7D01G113000 | chr7A | 668986235 | 668988053 | 1818 | True | 2737 | 2737 | 93.9690 | 544 | 2348 | 1 | chr7A.!!$R3 | 1804 |
12 | TraesCS7D01G113000 | chr7A | 695378930 | 695380554 | 1624 | False | 2215 | 2215 | 91.2100 | 523 | 2172 | 1 | chr7A.!!$F1 | 1649 |
13 | TraesCS7D01G113000 | chr7A | 74930889 | 74931419 | 530 | True | 763 | 763 | 92.5230 | 5 | 539 | 1 | chr7A.!!$R1 | 534 |
14 | TraesCS7D01G113000 | chr3A | 699108759 | 699110580 | 1821 | False | 2702 | 2702 | 93.5550 | 536 | 2348 | 1 | chr3A.!!$F1 | 1812 |
15 | TraesCS7D01G113000 | chr5A | 639270357 | 639271975 | 1618 | True | 2335 | 2335 | 92.7870 | 732 | 2348 | 1 | chr5A.!!$R1 | 1616 |
16 | TraesCS7D01G113000 | chr7B | 11022162 | 11022680 | 518 | True | 499 | 499 | 84.0300 | 4 | 528 | 1 | chr7B.!!$R1 | 524 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
434 | 435 | 0.032615 | TGAAGGCAGGTGGTGGTTTT | 60.033 | 50.0 | 0.0 | 0.0 | 0.0 | 2.43 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2397 | 2948 | 0.168128 | CGAAAACTGTTGCGATCCCC | 59.832 | 55.0 | 9.57 | 0.0 | 38.11 | 4.81 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
42 | 43 | 3.897141 | AACTAAGGGAGACTAGCTTGC | 57.103 | 47.619 | 0.00 | 0.00 | 0.00 | 4.01 |
93 | 94 | 1.265095 | GCATACCGCAATGATCCTGTG | 59.735 | 52.381 | 0.00 | 0.00 | 41.79 | 3.66 |
101 | 102 | 3.208594 | GCAATGATCCTGTGCATCAGTA | 58.791 | 45.455 | 13.06 | 1.03 | 42.19 | 2.74 |
141 | 142 | 3.516981 | ATCGACAACACTGAGATGGAG | 57.483 | 47.619 | 0.00 | 0.00 | 0.00 | 3.86 |
148 | 149 | 5.624159 | ACAACACTGAGATGGAGAAAATCA | 58.376 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
178 | 179 | 0.972134 | CTGAGTCACTCAAGGCAGGA | 59.028 | 55.000 | 9.30 | 0.00 | 40.18 | 3.86 |
213 | 214 | 3.477956 | AACCTCCCCACCCGTGAGA | 62.478 | 63.158 | 0.00 | 0.00 | 0.00 | 3.27 |
214 | 215 | 3.391382 | CCTCCCCACCCGTGAGAC | 61.391 | 72.222 | 0.00 | 0.00 | 0.00 | 3.36 |
260 | 261 | 3.417275 | CTGCTAGAGGTCACCGGCG | 62.417 | 68.421 | 0.00 | 0.00 | 0.00 | 6.46 |
278 | 279 | 1.891919 | GGGCAAAGCTCGTGTGACA | 60.892 | 57.895 | 0.00 | 0.00 | 0.00 | 3.58 |
281 | 282 | 0.233332 | GCAAAGCTCGTGTGACAGAC | 59.767 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
287 | 288 | 3.036084 | CGTGTGACAGACGGCACC | 61.036 | 66.667 | 16.80 | 0.00 | 34.19 | 5.01 |
288 | 289 | 3.036084 | GTGTGACAGACGGCACCG | 61.036 | 66.667 | 7.71 | 7.71 | 46.03 | 4.94 |
302 | 303 | 2.039624 | ACCGGCTGGAGTCCATCT | 59.960 | 61.111 | 21.41 | 0.00 | 39.21 | 2.90 |
356 | 357 | 3.300388 | CTGCCTCTCAGGTATCTTGGTA | 58.700 | 50.000 | 0.00 | 0.00 | 37.80 | 3.25 |
358 | 359 | 3.706594 | TGCCTCTCAGGTATCTTGGTAAG | 59.293 | 47.826 | 0.00 | 0.00 | 37.80 | 2.34 |
359 | 360 | 3.070302 | GCCTCTCAGGTATCTTGGTAAGG | 59.930 | 52.174 | 0.00 | 0.00 | 37.80 | 2.69 |
360 | 361 | 4.547671 | CCTCTCAGGTATCTTGGTAAGGA | 58.452 | 47.826 | 0.00 | 0.00 | 0.00 | 3.36 |
361 | 362 | 5.151454 | CCTCTCAGGTATCTTGGTAAGGAT | 58.849 | 45.833 | 0.00 | 0.00 | 0.00 | 3.24 |
362 | 363 | 5.604650 | CCTCTCAGGTATCTTGGTAAGGATT | 59.395 | 44.000 | 0.00 | 0.00 | 0.00 | 3.01 |
363 | 364 | 6.100424 | CCTCTCAGGTATCTTGGTAAGGATTT | 59.900 | 42.308 | 0.00 | 0.00 | 0.00 | 2.17 |
364 | 365 | 6.889198 | TCTCAGGTATCTTGGTAAGGATTTG | 58.111 | 40.000 | 0.00 | 0.00 | 0.00 | 2.32 |
365 | 366 | 6.443849 | TCTCAGGTATCTTGGTAAGGATTTGT | 59.556 | 38.462 | 0.00 | 0.00 | 0.00 | 2.83 |
366 | 367 | 7.027874 | TCAGGTATCTTGGTAAGGATTTGTT | 57.972 | 36.000 | 0.00 | 0.00 | 0.00 | 2.83 |
367 | 368 | 7.110155 | TCAGGTATCTTGGTAAGGATTTGTTC | 58.890 | 38.462 | 0.00 | 0.00 | 0.00 | 3.18 |
368 | 369 | 7.037586 | TCAGGTATCTTGGTAAGGATTTGTTCT | 60.038 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
369 | 370 | 8.265055 | CAGGTATCTTGGTAAGGATTTGTTCTA | 58.735 | 37.037 | 0.00 | 0.00 | 0.00 | 2.10 |
370 | 371 | 8.265764 | AGGTATCTTGGTAAGGATTTGTTCTAC | 58.734 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
371 | 372 | 8.044908 | GGTATCTTGGTAAGGATTTGTTCTACA | 58.955 | 37.037 | 0.00 | 0.00 | 0.00 | 2.74 |
372 | 373 | 9.099454 | GTATCTTGGTAAGGATTTGTTCTACAG | 57.901 | 37.037 | 0.00 | 0.00 | 0.00 | 2.74 |
373 | 374 | 5.938125 | TCTTGGTAAGGATTTGTTCTACAGC | 59.062 | 40.000 | 0.00 | 0.00 | 0.00 | 4.40 |
374 | 375 | 4.250464 | TGGTAAGGATTTGTTCTACAGCG | 58.750 | 43.478 | 0.00 | 0.00 | 0.00 | 5.18 |
375 | 376 | 4.020928 | TGGTAAGGATTTGTTCTACAGCGA | 60.021 | 41.667 | 0.00 | 0.00 | 0.00 | 4.93 |
376 | 377 | 4.933400 | GGTAAGGATTTGTTCTACAGCGAA | 59.067 | 41.667 | 0.00 | 0.00 | 0.00 | 4.70 |
377 | 378 | 5.585047 | GGTAAGGATTTGTTCTACAGCGAAT | 59.415 | 40.000 | 0.00 | 0.00 | 0.00 | 3.34 |
378 | 379 | 5.551760 | AAGGATTTGTTCTACAGCGAATG | 57.448 | 39.130 | 0.00 | 0.00 | 0.00 | 2.67 |
379 | 380 | 4.579869 | AGGATTTGTTCTACAGCGAATGT | 58.420 | 39.130 | 0.00 | 0.00 | 46.45 | 2.71 |
380 | 381 | 5.003804 | AGGATTTGTTCTACAGCGAATGTT | 58.996 | 37.500 | 0.00 | 0.00 | 39.96 | 2.71 |
381 | 382 | 5.473504 | AGGATTTGTTCTACAGCGAATGTTT | 59.526 | 36.000 | 0.00 | 0.00 | 39.96 | 2.83 |
382 | 383 | 6.653320 | AGGATTTGTTCTACAGCGAATGTTTA | 59.347 | 34.615 | 0.00 | 0.00 | 39.96 | 2.01 |
383 | 384 | 6.961554 | GGATTTGTTCTACAGCGAATGTTTAG | 59.038 | 38.462 | 0.00 | 0.00 | 39.96 | 1.85 |
384 | 385 | 5.856126 | TTGTTCTACAGCGAATGTTTAGG | 57.144 | 39.130 | 0.00 | 0.00 | 39.96 | 2.69 |
385 | 386 | 3.682858 | TGTTCTACAGCGAATGTTTAGGC | 59.317 | 43.478 | 0.00 | 0.00 | 39.96 | 3.93 |
386 | 387 | 3.603158 | TCTACAGCGAATGTTTAGGCA | 57.397 | 42.857 | 0.00 | 0.00 | 39.96 | 4.75 |
387 | 388 | 3.259064 | TCTACAGCGAATGTTTAGGCAC | 58.741 | 45.455 | 0.00 | 0.00 | 39.96 | 5.01 |
388 | 389 | 1.890876 | ACAGCGAATGTTTAGGCACA | 58.109 | 45.000 | 0.00 | 0.00 | 39.96 | 4.57 |
389 | 390 | 1.806542 | ACAGCGAATGTTTAGGCACAG | 59.193 | 47.619 | 0.00 | 0.00 | 39.96 | 3.66 |
390 | 391 | 2.076100 | CAGCGAATGTTTAGGCACAGA | 58.924 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
391 | 392 | 2.094894 | CAGCGAATGTTTAGGCACAGAG | 59.905 | 50.000 | 0.00 | 0.00 | 0.00 | 3.35 |
392 | 393 | 1.202076 | GCGAATGTTTAGGCACAGAGC | 60.202 | 52.381 | 0.00 | 0.00 | 44.65 | 4.09 |
393 | 394 | 2.350522 | CGAATGTTTAGGCACAGAGCT | 58.649 | 47.619 | 0.00 | 0.00 | 44.79 | 4.09 |
394 | 395 | 2.094894 | CGAATGTTTAGGCACAGAGCTG | 59.905 | 50.000 | 0.00 | 0.00 | 44.79 | 4.24 |
395 | 396 | 2.867109 | ATGTTTAGGCACAGAGCTGT | 57.133 | 45.000 | 0.00 | 0.00 | 46.17 | 4.40 |
396 | 397 | 2.169832 | TGTTTAGGCACAGAGCTGTC | 57.830 | 50.000 | 0.00 | 0.00 | 42.83 | 3.51 |
397 | 398 | 1.270839 | TGTTTAGGCACAGAGCTGTCC | 60.271 | 52.381 | 0.00 | 5.72 | 42.83 | 4.02 |
398 | 399 | 1.055849 | TTTAGGCACAGAGCTGTCCA | 58.944 | 50.000 | 16.14 | 5.31 | 42.83 | 4.02 |
399 | 400 | 0.610174 | TTAGGCACAGAGCTGTCCAG | 59.390 | 55.000 | 16.14 | 3.12 | 42.83 | 3.86 |
400 | 401 | 0.251787 | TAGGCACAGAGCTGTCCAGA | 60.252 | 55.000 | 16.14 | 6.07 | 42.83 | 3.86 |
401 | 402 | 1.079266 | GGCACAGAGCTGTCCAGAG | 60.079 | 63.158 | 0.00 | 0.00 | 42.83 | 3.35 |
402 | 403 | 1.670590 | GCACAGAGCTGTCCAGAGT | 59.329 | 57.895 | 0.00 | 0.00 | 42.83 | 3.24 |
403 | 404 | 0.034616 | GCACAGAGCTGTCCAGAGTT | 59.965 | 55.000 | 0.00 | 0.00 | 42.83 | 3.01 |
404 | 405 | 1.273606 | GCACAGAGCTGTCCAGAGTTA | 59.726 | 52.381 | 0.00 | 0.00 | 42.83 | 2.24 |
405 | 406 | 2.673610 | GCACAGAGCTGTCCAGAGTTAG | 60.674 | 54.545 | 0.00 | 0.00 | 42.83 | 2.34 |
406 | 407 | 2.822561 | CACAGAGCTGTCCAGAGTTAGA | 59.177 | 50.000 | 0.00 | 0.00 | 42.83 | 2.10 |
407 | 408 | 3.088532 | ACAGAGCTGTCCAGAGTTAGAG | 58.911 | 50.000 | 0.00 | 0.00 | 40.24 | 2.43 |
408 | 409 | 3.088532 | CAGAGCTGTCCAGAGTTAGAGT | 58.911 | 50.000 | 0.00 | 0.00 | 0.00 | 3.24 |
409 | 410 | 3.088532 | AGAGCTGTCCAGAGTTAGAGTG | 58.911 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
410 | 411 | 2.165437 | GAGCTGTCCAGAGTTAGAGTGG | 59.835 | 54.545 | 0.00 | 0.00 | 0.00 | 4.00 |
411 | 412 | 1.404851 | GCTGTCCAGAGTTAGAGTGGC | 60.405 | 57.143 | 0.00 | 0.00 | 0.00 | 5.01 |
412 | 413 | 1.895798 | CTGTCCAGAGTTAGAGTGGCA | 59.104 | 52.381 | 0.00 | 0.00 | 0.00 | 4.92 |
413 | 414 | 2.499289 | CTGTCCAGAGTTAGAGTGGCAT | 59.501 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
414 | 415 | 2.497675 | TGTCCAGAGTTAGAGTGGCATC | 59.502 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
415 | 416 | 2.763448 | GTCCAGAGTTAGAGTGGCATCT | 59.237 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
416 | 417 | 2.762887 | TCCAGAGTTAGAGTGGCATCTG | 59.237 | 50.000 | 5.28 | 5.28 | 35.14 | 2.90 |
417 | 418 | 2.762887 | CCAGAGTTAGAGTGGCATCTGA | 59.237 | 50.000 | 12.34 | 1.48 | 37.03 | 3.27 |
418 | 419 | 3.196469 | CCAGAGTTAGAGTGGCATCTGAA | 59.804 | 47.826 | 12.34 | 0.00 | 37.03 | 3.02 |
419 | 420 | 4.431809 | CAGAGTTAGAGTGGCATCTGAAG | 58.568 | 47.826 | 6.21 | 0.00 | 37.03 | 3.02 |
420 | 421 | 3.450457 | AGAGTTAGAGTGGCATCTGAAGG | 59.550 | 47.826 | 8.95 | 0.00 | 0.00 | 3.46 |
421 | 422 | 2.093235 | AGTTAGAGTGGCATCTGAAGGC | 60.093 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
422 | 423 | 1.571955 | TAGAGTGGCATCTGAAGGCA | 58.428 | 50.000 | 4.96 | 4.96 | 39.41 | 4.75 |
423 | 424 | 0.252479 | AGAGTGGCATCTGAAGGCAG | 59.748 | 55.000 | 9.49 | 0.00 | 42.55 | 4.85 |
424 | 425 | 0.747283 | GAGTGGCATCTGAAGGCAGG | 60.747 | 60.000 | 9.49 | 0.00 | 42.55 | 4.85 |
425 | 426 | 1.001641 | GTGGCATCTGAAGGCAGGT | 60.002 | 57.895 | 9.49 | 0.00 | 42.55 | 4.00 |
430 | 431 | 1.687612 | ATCTGAAGGCAGGTGGTGG | 59.312 | 57.895 | 0.00 | 0.00 | 42.53 | 4.61 |
431 | 432 | 1.136329 | ATCTGAAGGCAGGTGGTGGT | 61.136 | 55.000 | 0.00 | 0.00 | 42.53 | 4.16 |
432 | 433 | 1.151450 | CTGAAGGCAGGTGGTGGTT | 59.849 | 57.895 | 0.00 | 0.00 | 38.51 | 3.67 |
433 | 434 | 0.468029 | CTGAAGGCAGGTGGTGGTTT | 60.468 | 55.000 | 0.00 | 0.00 | 38.51 | 3.27 |
434 | 435 | 0.032615 | TGAAGGCAGGTGGTGGTTTT | 60.033 | 50.000 | 0.00 | 0.00 | 0.00 | 2.43 |
435 | 436 | 0.389025 | GAAGGCAGGTGGTGGTTTTG | 59.611 | 55.000 | 0.00 | 0.00 | 0.00 | 2.44 |
436 | 437 | 1.048160 | AAGGCAGGTGGTGGTTTTGG | 61.048 | 55.000 | 0.00 | 0.00 | 0.00 | 3.28 |
437 | 438 | 2.506957 | GGCAGGTGGTGGTTTTGGG | 61.507 | 63.158 | 0.00 | 0.00 | 0.00 | 4.12 |
438 | 439 | 2.506957 | GCAGGTGGTGGTTTTGGGG | 61.507 | 63.158 | 0.00 | 0.00 | 0.00 | 4.96 |
439 | 440 | 2.123033 | AGGTGGTGGTTTTGGGGC | 60.123 | 61.111 | 0.00 | 0.00 | 0.00 | 5.80 |
440 | 441 | 3.238497 | GGTGGTGGTTTTGGGGCC | 61.238 | 66.667 | 0.00 | 0.00 | 0.00 | 5.80 |
441 | 442 | 2.123033 | GTGGTGGTTTTGGGGCCT | 60.123 | 61.111 | 0.84 | 0.00 | 0.00 | 5.19 |
442 | 443 | 2.200092 | TGGTGGTTTTGGGGCCTC | 59.800 | 61.111 | 0.84 | 0.00 | 0.00 | 4.70 |
443 | 444 | 2.200092 | GGTGGTTTTGGGGCCTCA | 59.800 | 61.111 | 0.00 | 0.00 | 0.00 | 3.86 |
444 | 445 | 1.458588 | GGTGGTTTTGGGGCCTCAA | 60.459 | 57.895 | 16.07 | 16.07 | 0.00 | 3.02 |
445 | 446 | 1.471829 | GGTGGTTTTGGGGCCTCAAG | 61.472 | 60.000 | 19.55 | 0.00 | 0.00 | 3.02 |
446 | 447 | 1.152355 | TGGTTTTGGGGCCTCAAGG | 60.152 | 57.895 | 19.55 | 0.00 | 38.53 | 3.61 |
468 | 469 | 2.745884 | CAGGCCCGCACGAATCAA | 60.746 | 61.111 | 0.00 | 0.00 | 0.00 | 2.57 |
469 | 470 | 2.033448 | AGGCCCGCACGAATCAAA | 59.967 | 55.556 | 0.00 | 0.00 | 0.00 | 2.69 |
470 | 471 | 2.040544 | AGGCCCGCACGAATCAAAG | 61.041 | 57.895 | 0.00 | 0.00 | 0.00 | 2.77 |
471 | 472 | 2.038269 | GGCCCGCACGAATCAAAGA | 61.038 | 57.895 | 0.00 | 0.00 | 0.00 | 2.52 |
472 | 473 | 1.582610 | GGCCCGCACGAATCAAAGAA | 61.583 | 55.000 | 0.00 | 0.00 | 0.00 | 2.52 |
473 | 474 | 0.451783 | GCCCGCACGAATCAAAGAAT | 59.548 | 50.000 | 0.00 | 0.00 | 0.00 | 2.40 |
474 | 475 | 1.531883 | GCCCGCACGAATCAAAGAATC | 60.532 | 52.381 | 0.00 | 0.00 | 0.00 | 2.52 |
475 | 476 | 2.009774 | CCCGCACGAATCAAAGAATCT | 58.990 | 47.619 | 0.00 | 0.00 | 0.00 | 2.40 |
476 | 477 | 3.194861 | CCCGCACGAATCAAAGAATCTA | 58.805 | 45.455 | 0.00 | 0.00 | 0.00 | 1.98 |
477 | 478 | 3.809832 | CCCGCACGAATCAAAGAATCTAT | 59.190 | 43.478 | 0.00 | 0.00 | 0.00 | 1.98 |
478 | 479 | 4.319046 | CCCGCACGAATCAAAGAATCTATG | 60.319 | 45.833 | 0.00 | 0.00 | 0.00 | 2.23 |
479 | 480 | 4.206843 | CGCACGAATCAAAGAATCTATGC | 58.793 | 43.478 | 0.00 | 0.00 | 0.00 | 3.14 |
480 | 481 | 4.206843 | GCACGAATCAAAGAATCTATGCG | 58.793 | 43.478 | 0.00 | 0.00 | 0.00 | 4.73 |
481 | 482 | 4.260375 | GCACGAATCAAAGAATCTATGCGT | 60.260 | 41.667 | 0.00 | 0.00 | 0.00 | 5.24 |
482 | 483 | 5.427082 | CACGAATCAAAGAATCTATGCGTC | 58.573 | 41.667 | 0.00 | 0.00 | 0.00 | 5.19 |
483 | 484 | 4.207224 | ACGAATCAAAGAATCTATGCGTCG | 59.793 | 41.667 | 0.00 | 0.00 | 0.00 | 5.12 |
484 | 485 | 4.207224 | CGAATCAAAGAATCTATGCGTCGT | 59.793 | 41.667 | 0.00 | 0.00 | 0.00 | 4.34 |
485 | 486 | 5.276395 | CGAATCAAAGAATCTATGCGTCGTT | 60.276 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
486 | 487 | 4.840401 | TCAAAGAATCTATGCGTCGTTG | 57.160 | 40.909 | 0.00 | 0.00 | 33.68 | 4.10 |
487 | 488 | 4.242475 | TCAAAGAATCTATGCGTCGTTGT | 58.758 | 39.130 | 0.00 | 0.00 | 33.96 | 3.32 |
488 | 489 | 5.404096 | TCAAAGAATCTATGCGTCGTTGTA | 58.596 | 37.500 | 0.00 | 0.00 | 33.96 | 2.41 |
489 | 490 | 5.287752 | TCAAAGAATCTATGCGTCGTTGTAC | 59.712 | 40.000 | 0.00 | 0.00 | 33.96 | 2.90 |
490 | 491 | 3.703420 | AGAATCTATGCGTCGTTGTACC | 58.297 | 45.455 | 0.00 | 0.00 | 0.00 | 3.34 |
491 | 492 | 3.380637 | AGAATCTATGCGTCGTTGTACCT | 59.619 | 43.478 | 0.00 | 0.00 | 0.00 | 3.08 |
492 | 493 | 3.795623 | ATCTATGCGTCGTTGTACCTT | 57.204 | 42.857 | 0.00 | 0.00 | 0.00 | 3.50 |
493 | 494 | 2.871133 | TCTATGCGTCGTTGTACCTTG | 58.129 | 47.619 | 0.00 | 0.00 | 0.00 | 3.61 |
494 | 495 | 2.488937 | TCTATGCGTCGTTGTACCTTGA | 59.511 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
495 | 496 | 2.380084 | ATGCGTCGTTGTACCTTGAT | 57.620 | 45.000 | 0.00 | 0.00 | 0.00 | 2.57 |
496 | 497 | 3.513680 | ATGCGTCGTTGTACCTTGATA | 57.486 | 42.857 | 0.00 | 0.00 | 0.00 | 2.15 |
497 | 498 | 2.598589 | TGCGTCGTTGTACCTTGATAC | 58.401 | 47.619 | 0.00 | 0.00 | 0.00 | 2.24 |
498 | 499 | 2.030096 | TGCGTCGTTGTACCTTGATACA | 60.030 | 45.455 | 0.00 | 0.00 | 33.18 | 2.29 |
499 | 500 | 2.343544 | GCGTCGTTGTACCTTGATACAC | 59.656 | 50.000 | 0.00 | 0.00 | 34.79 | 2.90 |
500 | 501 | 3.829948 | CGTCGTTGTACCTTGATACACT | 58.170 | 45.455 | 0.00 | 0.00 | 34.79 | 3.55 |
501 | 502 | 4.672542 | GCGTCGTTGTACCTTGATACACTA | 60.673 | 45.833 | 0.00 | 0.00 | 34.79 | 2.74 |
502 | 503 | 4.790140 | CGTCGTTGTACCTTGATACACTAC | 59.210 | 45.833 | 0.00 | 0.00 | 34.79 | 2.73 |
503 | 504 | 5.617529 | CGTCGTTGTACCTTGATACACTACA | 60.618 | 44.000 | 0.00 | 0.00 | 34.79 | 2.74 |
504 | 505 | 5.570589 | GTCGTTGTACCTTGATACACTACAC | 59.429 | 44.000 | 0.00 | 0.00 | 34.79 | 2.90 |
505 | 506 | 4.860907 | CGTTGTACCTTGATACACTACACC | 59.139 | 45.833 | 0.00 | 0.00 | 34.79 | 4.16 |
506 | 507 | 4.707030 | TGTACCTTGATACACTACACCG | 57.293 | 45.455 | 0.00 | 0.00 | 29.97 | 4.94 |
507 | 508 | 4.334552 | TGTACCTTGATACACTACACCGA | 58.665 | 43.478 | 0.00 | 0.00 | 29.97 | 4.69 |
508 | 509 | 4.397103 | TGTACCTTGATACACTACACCGAG | 59.603 | 45.833 | 0.00 | 0.00 | 29.97 | 4.63 |
509 | 510 | 2.758979 | ACCTTGATACACTACACCGAGG | 59.241 | 50.000 | 0.00 | 0.00 | 35.14 | 4.63 |
510 | 511 | 2.758979 | CCTTGATACACTACACCGAGGT | 59.241 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
511 | 512 | 3.181489 | CCTTGATACACTACACCGAGGTC | 60.181 | 52.174 | 0.00 | 0.00 | 0.00 | 3.85 |
512 | 513 | 3.076079 | TGATACACTACACCGAGGTCA | 57.924 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
513 | 514 | 3.423749 | TGATACACTACACCGAGGTCAA | 58.576 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
514 | 515 | 3.442625 | TGATACACTACACCGAGGTCAAG | 59.557 | 47.826 | 0.00 | 0.00 | 0.00 | 3.02 |
515 | 516 | 0.317479 | ACACTACACCGAGGTCAAGC | 59.683 | 55.000 | 0.00 | 0.00 | 0.00 | 4.01 |
516 | 517 | 0.317160 | CACTACACCGAGGTCAAGCA | 59.683 | 55.000 | 0.00 | 0.00 | 0.00 | 3.91 |
517 | 518 | 1.066858 | CACTACACCGAGGTCAAGCAT | 60.067 | 52.381 | 0.00 | 0.00 | 0.00 | 3.79 |
518 | 519 | 1.204941 | ACTACACCGAGGTCAAGCATC | 59.795 | 52.381 | 0.00 | 0.00 | 0.00 | 3.91 |
519 | 520 | 0.535335 | TACACCGAGGTCAAGCATCC | 59.465 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
520 | 521 | 1.194781 | ACACCGAGGTCAAGCATCCT | 61.195 | 55.000 | 0.00 | 0.00 | 36.70 | 3.24 |
521 | 522 | 0.824109 | CACCGAGGTCAAGCATCCTA | 59.176 | 55.000 | 0.00 | 0.00 | 33.83 | 2.94 |
530 | 531 | 3.440522 | GGTCAAGCATCCTAGGTGTTTTC | 59.559 | 47.826 | 9.08 | 6.53 | 0.00 | 2.29 |
574 | 575 | 3.123621 | GCGACGTCTTTGAGATGAATTGT | 59.876 | 43.478 | 14.70 | 0.00 | 34.89 | 2.71 |
650 | 651 | 3.282021 | ACAATAGCTCCAATGCGACATT | 58.718 | 40.909 | 0.00 | 0.00 | 38.13 | 2.71 |
707 | 708 | 5.944007 | GGGTTAGTGGTTTGAGTTATGACAT | 59.056 | 40.000 | 0.00 | 0.00 | 0.00 | 3.06 |
787 | 788 | 2.433436 | GGACCCACAACTTATCCACAC | 58.567 | 52.381 | 0.00 | 0.00 | 0.00 | 3.82 |
1178 | 1554 | 1.261480 | CGGTGGATCTGATCTAGGGG | 58.739 | 60.000 | 16.61 | 0.44 | 0.00 | 4.79 |
1204 | 1580 | 1.004679 | GCCGTCGACCCCTGTTTAA | 60.005 | 57.895 | 10.58 | 0.00 | 0.00 | 1.52 |
1208 | 1584 | 1.670967 | CGTCGACCCCTGTTTAACCTC | 60.671 | 57.143 | 10.58 | 0.00 | 0.00 | 3.85 |
1288 | 1728 | 3.226347 | GTTGAAATTCGAGGCTTCAACG | 58.774 | 45.455 | 22.38 | 0.00 | 45.13 | 4.10 |
1348 | 1890 | 2.550606 | GGAACACGCTTCACATTTGGTA | 59.449 | 45.455 | 0.00 | 0.00 | 0.00 | 3.25 |
1434 | 1976 | 4.784710 | GCAACTAAAGCAGCTGATCGATTC | 60.785 | 45.833 | 20.43 | 0.00 | 0.00 | 2.52 |
1516 | 2060 | 9.528018 | GGTTTCTTTTACTTGATGTTCATCAAA | 57.472 | 29.630 | 22.72 | 11.14 | 39.73 | 2.69 |
1689 | 2234 | 6.823286 | TTCTGGTAATGATATTCAGACCCA | 57.177 | 37.500 | 8.22 | 0.00 | 36.18 | 4.51 |
1690 | 2235 | 7.392766 | TTCTGGTAATGATATTCAGACCCAT | 57.607 | 36.000 | 8.22 | 0.00 | 36.18 | 4.00 |
1756 | 2302 | 4.245660 | TCTTGTAACTGAATCGAAGCAGG | 58.754 | 43.478 | 18.42 | 3.97 | 36.47 | 4.85 |
1773 | 2319 | 3.461085 | AGCAGGGATATCCAGTGTTCATT | 59.539 | 43.478 | 23.27 | 3.31 | 38.24 | 2.57 |
1807 | 2353 | 3.381045 | TCTTCAGTTAACAGAGTGCACG | 58.619 | 45.455 | 12.01 | 0.00 | 0.00 | 5.34 |
1886 | 2433 | 1.928868 | AACCAGGCCCAAATTGAGAG | 58.071 | 50.000 | 0.00 | 0.00 | 0.00 | 3.20 |
1944 | 2492 | 1.392589 | CATAGAGGCGCCCATGTTTT | 58.607 | 50.000 | 26.15 | 0.94 | 0.00 | 2.43 |
1949 | 2499 | 2.831526 | AGAGGCGCCCATGTTTTAAAAT | 59.168 | 40.909 | 26.15 | 0.00 | 0.00 | 1.82 |
1950 | 2500 | 4.020543 | AGAGGCGCCCATGTTTTAAAATA | 58.979 | 39.130 | 26.15 | 1.41 | 0.00 | 1.40 |
2125 | 2676 | 9.674068 | TTACATATTTGTTGCTTGTCCACTATA | 57.326 | 29.630 | 0.00 | 0.00 | 37.28 | 1.31 |
2291 | 2842 | 6.183360 | TGCTCTAAAAATATTGGCCAGATGTG | 60.183 | 38.462 | 5.11 | 0.00 | 0.00 | 3.21 |
2382 | 2933 | 9.709495 | AATTATTTGTGTTAGTTGCATGTTGAT | 57.291 | 25.926 | 0.00 | 0.00 | 0.00 | 2.57 |
2385 | 2936 | 7.922505 | TTTGTGTTAGTTGCATGTTGATAAC | 57.077 | 32.000 | 0.00 | 0.83 | 0.00 | 1.89 |
2386 | 2937 | 6.007936 | TGTGTTAGTTGCATGTTGATAACC | 57.992 | 37.500 | 0.00 | 0.00 | 0.00 | 2.85 |
2387 | 2938 | 5.048364 | TGTGTTAGTTGCATGTTGATAACCC | 60.048 | 40.000 | 0.00 | 0.00 | 0.00 | 4.11 |
2388 | 2939 | 4.155099 | TGTTAGTTGCATGTTGATAACCCG | 59.845 | 41.667 | 0.00 | 0.00 | 0.00 | 5.28 |
2389 | 2940 | 1.472480 | AGTTGCATGTTGATAACCCGC | 59.528 | 47.619 | 0.00 | 0.00 | 0.00 | 6.13 |
2390 | 2941 | 1.201181 | GTTGCATGTTGATAACCCGCA | 59.799 | 47.619 | 0.00 | 0.00 | 36.25 | 5.69 |
2391 | 2942 | 1.539157 | TGCATGTTGATAACCCGCAA | 58.461 | 45.000 | 0.00 | 0.00 | 35.46 | 4.85 |
2392 | 2943 | 1.472082 | TGCATGTTGATAACCCGCAAG | 59.528 | 47.619 | 0.00 | 0.00 | 35.46 | 4.01 |
2393 | 2944 | 1.472480 | GCATGTTGATAACCCGCAAGT | 59.528 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
2394 | 2945 | 2.680841 | GCATGTTGATAACCCGCAAGTA | 59.319 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
2395 | 2946 | 3.315191 | GCATGTTGATAACCCGCAAGTAT | 59.685 | 43.478 | 0.00 | 0.00 | 0.00 | 2.12 |
2396 | 2947 | 4.513692 | GCATGTTGATAACCCGCAAGTATA | 59.486 | 41.667 | 0.00 | 0.00 | 0.00 | 1.47 |
2397 | 2948 | 5.334105 | GCATGTTGATAACCCGCAAGTATAG | 60.334 | 44.000 | 0.00 | 0.00 | 0.00 | 1.31 |
2398 | 2949 | 4.699637 | TGTTGATAACCCGCAAGTATAGG | 58.300 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
2404 | 2955 | 0.246635 | CCCGCAAGTATAGGGGATCG | 59.753 | 60.000 | 0.00 | 0.00 | 42.59 | 3.69 |
2405 | 2956 | 0.389948 | CCGCAAGTATAGGGGATCGC | 60.390 | 60.000 | 0.06 | 0.06 | 41.25 | 4.58 |
2406 | 2957 | 0.317160 | CGCAAGTATAGGGGATCGCA | 59.683 | 55.000 | 12.32 | 0.00 | 0.00 | 5.10 |
2407 | 2958 | 1.270094 | CGCAAGTATAGGGGATCGCAA | 60.270 | 52.381 | 12.32 | 0.00 | 0.00 | 4.85 |
2408 | 2959 | 2.143925 | GCAAGTATAGGGGATCGCAAC | 58.856 | 52.381 | 12.32 | 4.19 | 0.00 | 4.17 |
2409 | 2960 | 2.484770 | GCAAGTATAGGGGATCGCAACA | 60.485 | 50.000 | 12.32 | 0.00 | 0.00 | 3.33 |
2410 | 2961 | 3.393800 | CAAGTATAGGGGATCGCAACAG | 58.606 | 50.000 | 12.32 | 0.00 | 0.00 | 3.16 |
2411 | 2962 | 2.679082 | AGTATAGGGGATCGCAACAGT | 58.321 | 47.619 | 12.32 | 0.00 | 0.00 | 3.55 |
2412 | 2963 | 3.039011 | AGTATAGGGGATCGCAACAGTT | 58.961 | 45.455 | 12.32 | 0.00 | 0.00 | 3.16 |
2413 | 2964 | 3.454812 | AGTATAGGGGATCGCAACAGTTT | 59.545 | 43.478 | 12.32 | 0.00 | 0.00 | 2.66 |
2414 | 2965 | 2.871096 | TAGGGGATCGCAACAGTTTT | 57.129 | 45.000 | 12.32 | 0.00 | 0.00 | 2.43 |
2415 | 2966 | 1.534729 | AGGGGATCGCAACAGTTTTC | 58.465 | 50.000 | 12.32 | 0.00 | 0.00 | 2.29 |
2416 | 2967 | 0.168128 | GGGGATCGCAACAGTTTTCG | 59.832 | 55.000 | 12.32 | 0.00 | 0.00 | 3.46 |
2417 | 2968 | 1.153353 | GGGATCGCAACAGTTTTCGA | 58.847 | 50.000 | 4.64 | 9.18 | 35.34 | 3.71 |
2418 | 2969 | 1.128692 | GGGATCGCAACAGTTTTCGAG | 59.871 | 52.381 | 4.64 | 0.00 | 34.30 | 4.04 |
2419 | 2970 | 1.128692 | GGATCGCAACAGTTTTCGAGG | 59.871 | 52.381 | 11.65 | 0.00 | 34.30 | 4.63 |
2420 | 2971 | 1.128692 | GATCGCAACAGTTTTCGAGGG | 59.871 | 52.381 | 11.65 | 0.00 | 34.30 | 4.30 |
2421 | 2972 | 0.179067 | TCGCAACAGTTTTCGAGGGT | 60.179 | 50.000 | 3.87 | 0.00 | 0.00 | 4.34 |
2422 | 2973 | 1.068895 | TCGCAACAGTTTTCGAGGGTA | 59.931 | 47.619 | 3.87 | 0.00 | 0.00 | 3.69 |
2423 | 2974 | 1.459592 | CGCAACAGTTTTCGAGGGTAG | 59.540 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
2424 | 2975 | 2.762745 | GCAACAGTTTTCGAGGGTAGA | 58.237 | 47.619 | 0.00 | 0.00 | 0.00 | 2.59 |
2425 | 2976 | 2.737252 | GCAACAGTTTTCGAGGGTAGAG | 59.263 | 50.000 | 0.00 | 0.00 | 0.00 | 2.43 |
2426 | 2977 | 3.802675 | GCAACAGTTTTCGAGGGTAGAGT | 60.803 | 47.826 | 0.00 | 0.00 | 0.00 | 3.24 |
2427 | 2978 | 4.560108 | GCAACAGTTTTCGAGGGTAGAGTA | 60.560 | 45.833 | 0.00 | 0.00 | 0.00 | 2.59 |
2428 | 2979 | 5.721232 | CAACAGTTTTCGAGGGTAGAGTAT | 58.279 | 41.667 | 0.00 | 0.00 | 0.00 | 2.12 |
2429 | 2980 | 5.997384 | ACAGTTTTCGAGGGTAGAGTATT | 57.003 | 39.130 | 0.00 | 0.00 | 0.00 | 1.89 |
2430 | 2981 | 5.963594 | ACAGTTTTCGAGGGTAGAGTATTC | 58.036 | 41.667 | 0.00 | 0.00 | 0.00 | 1.75 |
2431 | 2982 | 5.479375 | ACAGTTTTCGAGGGTAGAGTATTCA | 59.521 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2432 | 2983 | 6.014840 | ACAGTTTTCGAGGGTAGAGTATTCAA | 60.015 | 38.462 | 0.00 | 0.00 | 0.00 | 2.69 |
2433 | 2984 | 6.310711 | CAGTTTTCGAGGGTAGAGTATTCAAC | 59.689 | 42.308 | 0.00 | 0.00 | 0.00 | 3.18 |
2434 | 2985 | 4.996788 | TTCGAGGGTAGAGTATTCAACC | 57.003 | 45.455 | 0.00 | 0.00 | 0.00 | 3.77 |
2450 | 3001 | 9.801873 | AGTATTCAACCCAAATTTATTGATTCG | 57.198 | 29.630 | 10.73 | 0.00 | 31.45 | 3.34 |
2451 | 3002 | 9.796120 | GTATTCAACCCAAATTTATTGATTCGA | 57.204 | 29.630 | 10.73 | 0.00 | 31.45 | 3.71 |
2452 | 3003 | 8.702163 | ATTCAACCCAAATTTATTGATTCGAC | 57.298 | 30.769 | 10.73 | 0.00 | 31.45 | 4.20 |
2453 | 3004 | 7.220741 | TCAACCCAAATTTATTGATTCGACA | 57.779 | 32.000 | 7.33 | 0.00 | 0.00 | 4.35 |
2454 | 3005 | 7.087639 | TCAACCCAAATTTATTGATTCGACAC | 58.912 | 34.615 | 7.33 | 0.00 | 0.00 | 3.67 |
2455 | 3006 | 6.582677 | ACCCAAATTTATTGATTCGACACA | 57.417 | 33.333 | 0.00 | 0.00 | 0.00 | 3.72 |
2456 | 3007 | 6.987386 | ACCCAAATTTATTGATTCGACACAA | 58.013 | 32.000 | 6.03 | 6.03 | 0.00 | 3.33 |
2457 | 3008 | 7.090173 | ACCCAAATTTATTGATTCGACACAAG | 58.910 | 34.615 | 8.90 | 0.00 | 0.00 | 3.16 |
2458 | 3009 | 6.531240 | CCCAAATTTATTGATTCGACACAAGG | 59.469 | 38.462 | 8.90 | 3.91 | 0.00 | 3.61 |
2459 | 3010 | 6.531240 | CCAAATTTATTGATTCGACACAAGGG | 59.469 | 38.462 | 8.90 | 0.00 | 0.00 | 3.95 |
2460 | 3011 | 7.312154 | CAAATTTATTGATTCGACACAAGGGA | 58.688 | 34.615 | 8.90 | 0.00 | 0.00 | 4.20 |
2461 | 3012 | 6.683974 | ATTTATTGATTCGACACAAGGGAG | 57.316 | 37.500 | 8.90 | 0.00 | 0.00 | 4.30 |
2462 | 3013 | 1.808411 | TTGATTCGACACAAGGGAGC | 58.192 | 50.000 | 0.00 | 0.00 | 0.00 | 4.70 |
2463 | 3014 | 0.036388 | TGATTCGACACAAGGGAGCC | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 4.70 |
2464 | 3015 | 0.036388 | GATTCGACACAAGGGAGCCA | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 4.75 |
2465 | 3016 | 0.400213 | ATTCGACACAAGGGAGCCAA | 59.600 | 50.000 | 0.00 | 0.00 | 0.00 | 4.52 |
2466 | 3017 | 0.181587 | TTCGACACAAGGGAGCCAAA | 59.818 | 50.000 | 0.00 | 0.00 | 0.00 | 3.28 |
2467 | 3018 | 0.250295 | TCGACACAAGGGAGCCAAAG | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 2.77 |
2468 | 3019 | 0.250295 | CGACACAAGGGAGCCAAAGA | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 2.52 |
2469 | 3020 | 1.611673 | CGACACAAGGGAGCCAAAGAT | 60.612 | 52.381 | 0.00 | 0.00 | 0.00 | 2.40 |
2470 | 3021 | 2.519013 | GACACAAGGGAGCCAAAGATT | 58.481 | 47.619 | 0.00 | 0.00 | 0.00 | 2.40 |
2471 | 3022 | 3.686016 | GACACAAGGGAGCCAAAGATTA | 58.314 | 45.455 | 0.00 | 0.00 | 0.00 | 1.75 |
2472 | 3023 | 4.273318 | GACACAAGGGAGCCAAAGATTAT | 58.727 | 43.478 | 0.00 | 0.00 | 0.00 | 1.28 |
2473 | 3024 | 4.677182 | ACACAAGGGAGCCAAAGATTATT | 58.323 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
2474 | 3025 | 4.706962 | ACACAAGGGAGCCAAAGATTATTC | 59.293 | 41.667 | 0.00 | 0.00 | 0.00 | 1.75 |
2475 | 3026 | 4.952335 | CACAAGGGAGCCAAAGATTATTCT | 59.048 | 41.667 | 0.00 | 0.00 | 0.00 | 2.40 |
2476 | 3027 | 5.067023 | CACAAGGGAGCCAAAGATTATTCTC | 59.933 | 44.000 | 0.00 | 0.00 | 0.00 | 2.87 |
2477 | 3028 | 5.195940 | CAAGGGAGCCAAAGATTATTCTCA | 58.804 | 41.667 | 0.00 | 0.00 | 0.00 | 3.27 |
2478 | 3029 | 5.456921 | AGGGAGCCAAAGATTATTCTCAA | 57.543 | 39.130 | 0.00 | 0.00 | 0.00 | 3.02 |
2479 | 3030 | 5.444176 | AGGGAGCCAAAGATTATTCTCAAG | 58.556 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
2480 | 3031 | 5.044550 | AGGGAGCCAAAGATTATTCTCAAGT | 60.045 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2481 | 3032 | 6.158695 | AGGGAGCCAAAGATTATTCTCAAGTA | 59.841 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
2482 | 3033 | 7.001073 | GGGAGCCAAAGATTATTCTCAAGTAT | 58.999 | 38.462 | 0.00 | 0.00 | 0.00 | 2.12 |
2483 | 3034 | 7.503902 | GGGAGCCAAAGATTATTCTCAAGTATT | 59.496 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
2484 | 3035 | 9.561069 | GGAGCCAAAGATTATTCTCAAGTATTA | 57.439 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
2486 | 3037 | 9.061435 | AGCCAAAGATTATTCTCAAGTATTAGC | 57.939 | 33.333 | 0.00 | 0.00 | 0.00 | 3.09 |
2487 | 3038 | 8.840321 | GCCAAAGATTATTCTCAAGTATTAGCA | 58.160 | 33.333 | 0.00 | 0.00 | 0.00 | 3.49 |
2489 | 3040 | 9.875675 | CAAAGATTATTCTCAAGTATTAGCAGC | 57.124 | 33.333 | 0.00 | 0.00 | 0.00 | 5.25 |
2490 | 3041 | 9.844257 | AAAGATTATTCTCAAGTATTAGCAGCT | 57.156 | 29.630 | 0.00 | 0.00 | 0.00 | 4.24 |
2491 | 3042 | 8.830201 | AGATTATTCTCAAGTATTAGCAGCTG | 57.170 | 34.615 | 10.11 | 10.11 | 0.00 | 4.24 |
2492 | 3043 | 8.646004 | AGATTATTCTCAAGTATTAGCAGCTGA | 58.354 | 33.333 | 20.43 | 0.00 | 0.00 | 4.26 |
2493 | 3044 | 8.830201 | ATTATTCTCAAGTATTAGCAGCTGAG | 57.170 | 34.615 | 20.43 | 1.96 | 0.00 | 3.35 |
2494 | 3045 | 5.667539 | TTCTCAAGTATTAGCAGCTGAGT | 57.332 | 39.130 | 20.43 | 6.02 | 0.00 | 3.41 |
2495 | 3046 | 5.667539 | TCTCAAGTATTAGCAGCTGAGTT | 57.332 | 39.130 | 20.43 | 1.83 | 0.00 | 3.01 |
2496 | 3047 | 5.414360 | TCTCAAGTATTAGCAGCTGAGTTG | 58.586 | 41.667 | 20.43 | 15.03 | 0.00 | 3.16 |
2497 | 3048 | 5.047021 | TCTCAAGTATTAGCAGCTGAGTTGT | 60.047 | 40.000 | 20.43 | 0.85 | 0.00 | 3.32 |
2498 | 3049 | 5.171476 | TCAAGTATTAGCAGCTGAGTTGTC | 58.829 | 41.667 | 20.43 | 0.00 | 0.00 | 3.18 |
2499 | 3050 | 4.808414 | AGTATTAGCAGCTGAGTTGTCA | 57.192 | 40.909 | 20.43 | 0.00 | 0.00 | 3.58 |
2500 | 3051 | 5.152623 | AGTATTAGCAGCTGAGTTGTCAA | 57.847 | 39.130 | 20.43 | 0.00 | 30.14 | 3.18 |
2501 | 3052 | 5.738909 | AGTATTAGCAGCTGAGTTGTCAAT | 58.261 | 37.500 | 20.43 | 7.37 | 30.14 | 2.57 |
2502 | 3053 | 6.176183 | AGTATTAGCAGCTGAGTTGTCAATT | 58.824 | 36.000 | 20.43 | 0.00 | 30.14 | 2.32 |
2503 | 3054 | 5.557891 | ATTAGCAGCTGAGTTGTCAATTC | 57.442 | 39.130 | 20.43 | 1.25 | 30.14 | 2.17 |
2504 | 3055 | 2.854963 | AGCAGCTGAGTTGTCAATTCA | 58.145 | 42.857 | 20.43 | 10.07 | 30.14 | 2.57 |
2505 | 3056 | 3.216800 | AGCAGCTGAGTTGTCAATTCAA | 58.783 | 40.909 | 20.43 | 0.00 | 30.14 | 2.69 |
2506 | 3057 | 3.004106 | AGCAGCTGAGTTGTCAATTCAAC | 59.996 | 43.478 | 20.43 | 7.62 | 45.33 | 3.18 |
2507 | 3058 | 3.854784 | GCAGCTGAGTTGTCAATTCAACC | 60.855 | 47.826 | 20.43 | 6.34 | 45.90 | 3.77 |
2508 | 3059 | 3.316029 | CAGCTGAGTTGTCAATTCAACCA | 59.684 | 43.478 | 8.42 | 4.56 | 45.90 | 3.67 |
2509 | 3060 | 3.316308 | AGCTGAGTTGTCAATTCAACCAC | 59.684 | 43.478 | 11.44 | 3.11 | 45.90 | 4.16 |
2510 | 3061 | 3.066621 | GCTGAGTTGTCAATTCAACCACA | 59.933 | 43.478 | 11.44 | 6.79 | 45.90 | 4.17 |
2511 | 3062 | 4.601019 | CTGAGTTGTCAATTCAACCACAC | 58.399 | 43.478 | 11.44 | 0.00 | 45.90 | 3.82 |
2512 | 3063 | 3.380004 | TGAGTTGTCAATTCAACCACACC | 59.620 | 43.478 | 8.22 | 0.00 | 45.90 | 4.16 |
2513 | 3064 | 3.631250 | AGTTGTCAATTCAACCACACCT | 58.369 | 40.909 | 6.44 | 0.00 | 45.90 | 4.00 |
2514 | 3065 | 3.381272 | AGTTGTCAATTCAACCACACCTG | 59.619 | 43.478 | 6.44 | 0.00 | 45.90 | 4.00 |
2515 | 3066 | 2.305928 | TGTCAATTCAACCACACCTGG | 58.694 | 47.619 | 0.00 | 0.00 | 44.26 | 4.45 |
2516 | 3067 | 2.092158 | TGTCAATTCAACCACACCTGGA | 60.092 | 45.455 | 0.00 | 0.00 | 40.55 | 3.86 |
2517 | 3068 | 3.157087 | GTCAATTCAACCACACCTGGAT | 58.843 | 45.455 | 0.00 | 0.00 | 40.55 | 3.41 |
2518 | 3069 | 4.202514 | TGTCAATTCAACCACACCTGGATA | 60.203 | 41.667 | 0.00 | 0.00 | 40.55 | 2.59 |
2519 | 3070 | 4.764823 | GTCAATTCAACCACACCTGGATAA | 59.235 | 41.667 | 0.00 | 0.00 | 40.55 | 1.75 |
2520 | 3071 | 4.764823 | TCAATTCAACCACACCTGGATAAC | 59.235 | 41.667 | 0.00 | 0.00 | 40.55 | 1.89 |
2521 | 3072 | 4.657814 | ATTCAACCACACCTGGATAACT | 57.342 | 40.909 | 0.00 | 0.00 | 40.55 | 2.24 |
2522 | 3073 | 4.447138 | TTCAACCACACCTGGATAACTT | 57.553 | 40.909 | 0.00 | 0.00 | 40.55 | 2.66 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
42 | 43 | 2.925724 | AGTCCTGATGTCTCCTACTCG | 58.074 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
77 | 78 | 0.394762 | ATGCACAGGATCATTGCGGT | 60.395 | 50.000 | 0.00 | 0.00 | 39.22 | 5.68 |
93 | 94 | 5.447818 | GCCAACTTAGTTGTCATACTGATGC | 60.448 | 44.000 | 21.63 | 11.06 | 41.41 | 3.91 |
101 | 102 | 4.870426 | CGATAGTGCCAACTTAGTTGTCAT | 59.130 | 41.667 | 21.63 | 9.49 | 41.41 | 3.06 |
141 | 142 | 6.655003 | TGACTCAGAGGGTGTTATTGATTTTC | 59.345 | 38.462 | 1.53 | 0.00 | 0.00 | 2.29 |
148 | 149 | 4.160329 | TGAGTGACTCAGAGGGTGTTATT | 58.840 | 43.478 | 11.93 | 0.00 | 35.39 | 1.40 |
213 | 214 | 1.567649 | TGAGAGGTATAGGTGACGGGT | 59.432 | 52.381 | 0.00 | 0.00 | 0.00 | 5.28 |
214 | 215 | 1.955080 | GTGAGAGGTATAGGTGACGGG | 59.045 | 57.143 | 0.00 | 0.00 | 0.00 | 5.28 |
260 | 261 | 1.845809 | CTGTCACACGAGCTTTGCCC | 61.846 | 60.000 | 0.00 | 0.00 | 0.00 | 5.36 |
348 | 349 | 6.599638 | GCTGTAGAACAAATCCTTACCAAGAT | 59.400 | 38.462 | 0.00 | 0.00 | 0.00 | 2.40 |
356 | 357 | 5.003804 | ACATTCGCTGTAGAACAAATCCTT | 58.996 | 37.500 | 0.00 | 0.00 | 35.91 | 3.36 |
358 | 359 | 4.946784 | ACATTCGCTGTAGAACAAATCC | 57.053 | 40.909 | 0.00 | 0.00 | 35.91 | 3.01 |
359 | 360 | 6.961554 | CCTAAACATTCGCTGTAGAACAAATC | 59.038 | 38.462 | 0.00 | 0.00 | 36.98 | 2.17 |
360 | 361 | 6.622896 | GCCTAAACATTCGCTGTAGAACAAAT | 60.623 | 38.462 | 0.00 | 0.00 | 36.98 | 2.32 |
361 | 362 | 5.334569 | GCCTAAACATTCGCTGTAGAACAAA | 60.335 | 40.000 | 0.00 | 0.00 | 36.98 | 2.83 |
362 | 363 | 4.153475 | GCCTAAACATTCGCTGTAGAACAA | 59.847 | 41.667 | 0.00 | 0.00 | 36.98 | 2.83 |
363 | 364 | 3.682858 | GCCTAAACATTCGCTGTAGAACA | 59.317 | 43.478 | 0.00 | 0.00 | 36.98 | 3.18 |
364 | 365 | 3.682858 | TGCCTAAACATTCGCTGTAGAAC | 59.317 | 43.478 | 0.00 | 0.00 | 36.98 | 3.01 |
365 | 366 | 3.682858 | GTGCCTAAACATTCGCTGTAGAA | 59.317 | 43.478 | 0.00 | 0.00 | 36.98 | 2.10 |
366 | 367 | 3.259064 | GTGCCTAAACATTCGCTGTAGA | 58.741 | 45.455 | 0.00 | 0.00 | 36.98 | 2.59 |
367 | 368 | 3.000041 | TGTGCCTAAACATTCGCTGTAG | 59.000 | 45.455 | 0.00 | 0.00 | 36.98 | 2.74 |
368 | 369 | 3.000041 | CTGTGCCTAAACATTCGCTGTA | 59.000 | 45.455 | 0.00 | 0.00 | 36.98 | 2.74 |
369 | 370 | 1.806542 | CTGTGCCTAAACATTCGCTGT | 59.193 | 47.619 | 0.00 | 0.00 | 40.84 | 4.40 |
370 | 371 | 2.076100 | TCTGTGCCTAAACATTCGCTG | 58.924 | 47.619 | 0.00 | 0.00 | 0.00 | 5.18 |
371 | 372 | 2.350522 | CTCTGTGCCTAAACATTCGCT | 58.649 | 47.619 | 0.00 | 0.00 | 0.00 | 4.93 |
372 | 373 | 1.202076 | GCTCTGTGCCTAAACATTCGC | 60.202 | 52.381 | 0.00 | 0.00 | 35.15 | 4.70 |
373 | 374 | 2.094894 | CAGCTCTGTGCCTAAACATTCG | 59.905 | 50.000 | 0.00 | 0.00 | 44.23 | 3.34 |
374 | 375 | 3.077359 | ACAGCTCTGTGCCTAAACATTC | 58.923 | 45.455 | 1.15 | 0.00 | 43.11 | 2.67 |
375 | 376 | 3.077359 | GACAGCTCTGTGCCTAAACATT | 58.923 | 45.455 | 7.33 | 0.00 | 45.05 | 2.71 |
376 | 377 | 2.616510 | GGACAGCTCTGTGCCTAAACAT | 60.617 | 50.000 | 7.33 | 0.00 | 44.67 | 2.71 |
377 | 378 | 1.270839 | GGACAGCTCTGTGCCTAAACA | 60.271 | 52.381 | 7.33 | 0.00 | 44.67 | 2.83 |
378 | 379 | 1.443802 | GGACAGCTCTGTGCCTAAAC | 58.556 | 55.000 | 7.33 | 0.00 | 44.67 | 2.01 |
379 | 380 | 3.935993 | GGACAGCTCTGTGCCTAAA | 57.064 | 52.632 | 7.33 | 0.00 | 44.67 | 1.85 |
385 | 386 | 2.822561 | TCTAACTCTGGACAGCTCTGTG | 59.177 | 50.000 | 7.33 | 0.00 | 45.05 | 3.66 |
387 | 388 | 3.088532 | ACTCTAACTCTGGACAGCTCTG | 58.911 | 50.000 | 0.00 | 0.00 | 0.00 | 3.35 |
388 | 389 | 3.088532 | CACTCTAACTCTGGACAGCTCT | 58.911 | 50.000 | 0.00 | 0.00 | 0.00 | 4.09 |
389 | 390 | 2.165437 | CCACTCTAACTCTGGACAGCTC | 59.835 | 54.545 | 0.00 | 0.00 | 0.00 | 4.09 |
390 | 391 | 2.175202 | CCACTCTAACTCTGGACAGCT | 58.825 | 52.381 | 0.00 | 0.00 | 0.00 | 4.24 |
391 | 392 | 1.404851 | GCCACTCTAACTCTGGACAGC | 60.405 | 57.143 | 0.00 | 0.00 | 0.00 | 4.40 |
392 | 393 | 1.895798 | TGCCACTCTAACTCTGGACAG | 59.104 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
393 | 394 | 2.009681 | TGCCACTCTAACTCTGGACA | 57.990 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
394 | 395 | 2.763448 | AGATGCCACTCTAACTCTGGAC | 59.237 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
395 | 396 | 2.762887 | CAGATGCCACTCTAACTCTGGA | 59.237 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
396 | 397 | 2.762887 | TCAGATGCCACTCTAACTCTGG | 59.237 | 50.000 | 0.00 | 0.00 | 32.83 | 3.86 |
397 | 398 | 4.431809 | CTTCAGATGCCACTCTAACTCTG | 58.568 | 47.826 | 0.00 | 0.00 | 33.16 | 3.35 |
398 | 399 | 3.450457 | CCTTCAGATGCCACTCTAACTCT | 59.550 | 47.826 | 0.00 | 0.00 | 0.00 | 3.24 |
399 | 400 | 3.791245 | CCTTCAGATGCCACTCTAACTC | 58.209 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
400 | 401 | 2.093235 | GCCTTCAGATGCCACTCTAACT | 60.093 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
401 | 402 | 2.284190 | GCCTTCAGATGCCACTCTAAC | 58.716 | 52.381 | 0.00 | 0.00 | 0.00 | 2.34 |
402 | 403 | 1.908619 | TGCCTTCAGATGCCACTCTAA | 59.091 | 47.619 | 0.00 | 0.00 | 0.00 | 2.10 |
403 | 404 | 1.483827 | CTGCCTTCAGATGCCACTCTA | 59.516 | 52.381 | 0.00 | 0.00 | 42.95 | 2.43 |
404 | 405 | 0.252479 | CTGCCTTCAGATGCCACTCT | 59.748 | 55.000 | 0.00 | 0.00 | 42.95 | 3.24 |
405 | 406 | 0.747283 | CCTGCCTTCAGATGCCACTC | 60.747 | 60.000 | 0.00 | 0.00 | 42.95 | 3.51 |
406 | 407 | 1.302285 | CCTGCCTTCAGATGCCACT | 59.698 | 57.895 | 0.00 | 0.00 | 42.95 | 4.00 |
407 | 408 | 1.001641 | ACCTGCCTTCAGATGCCAC | 60.002 | 57.895 | 0.00 | 0.00 | 42.95 | 5.01 |
408 | 409 | 1.001764 | CACCTGCCTTCAGATGCCA | 60.002 | 57.895 | 0.00 | 0.00 | 42.95 | 4.92 |
409 | 410 | 1.751927 | CCACCTGCCTTCAGATGCC | 60.752 | 63.158 | 0.00 | 0.00 | 42.95 | 4.40 |
410 | 411 | 1.001641 | ACCACCTGCCTTCAGATGC | 60.002 | 57.895 | 0.00 | 0.00 | 42.95 | 3.91 |
411 | 412 | 0.679002 | CCACCACCTGCCTTCAGATG | 60.679 | 60.000 | 0.00 | 0.00 | 42.95 | 2.90 |
412 | 413 | 1.136329 | ACCACCACCTGCCTTCAGAT | 61.136 | 55.000 | 0.00 | 0.00 | 42.95 | 2.90 |
413 | 414 | 1.352622 | AACCACCACCTGCCTTCAGA | 61.353 | 55.000 | 0.00 | 0.00 | 42.95 | 3.27 |
414 | 415 | 0.468029 | AAACCACCACCTGCCTTCAG | 60.468 | 55.000 | 0.00 | 0.00 | 40.02 | 3.02 |
415 | 416 | 0.032615 | AAAACCACCACCTGCCTTCA | 60.033 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
416 | 417 | 0.389025 | CAAAACCACCACCTGCCTTC | 59.611 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
417 | 418 | 1.048160 | CCAAAACCACCACCTGCCTT | 61.048 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
418 | 419 | 1.457455 | CCAAAACCACCACCTGCCT | 60.457 | 57.895 | 0.00 | 0.00 | 0.00 | 4.75 |
419 | 420 | 2.506957 | CCCAAAACCACCACCTGCC | 61.507 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
420 | 421 | 2.506957 | CCCCAAAACCACCACCTGC | 61.507 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
421 | 422 | 2.506957 | GCCCCAAAACCACCACCTG | 61.507 | 63.158 | 0.00 | 0.00 | 0.00 | 4.00 |
422 | 423 | 2.123033 | GCCCCAAAACCACCACCT | 60.123 | 61.111 | 0.00 | 0.00 | 0.00 | 4.00 |
423 | 424 | 3.238497 | GGCCCCAAAACCACCACC | 61.238 | 66.667 | 0.00 | 0.00 | 0.00 | 4.61 |
424 | 425 | 2.123033 | AGGCCCCAAAACCACCAC | 60.123 | 61.111 | 0.00 | 0.00 | 0.00 | 4.16 |
425 | 426 | 2.200092 | GAGGCCCCAAAACCACCA | 59.800 | 61.111 | 0.00 | 0.00 | 0.00 | 4.17 |
426 | 427 | 1.458588 | TTGAGGCCCCAAAACCACC | 60.459 | 57.895 | 0.00 | 0.00 | 0.00 | 4.61 |
427 | 428 | 1.471829 | CCTTGAGGCCCCAAAACCAC | 61.472 | 60.000 | 0.00 | 0.00 | 0.00 | 4.16 |
428 | 429 | 1.152355 | CCTTGAGGCCCCAAAACCA | 60.152 | 57.895 | 0.00 | 0.00 | 0.00 | 3.67 |
429 | 430 | 3.791640 | CCTTGAGGCCCCAAAACC | 58.208 | 61.111 | 0.00 | 0.00 | 0.00 | 3.27 |
451 | 452 | 2.257286 | CTTTGATTCGTGCGGGCCTG | 62.257 | 60.000 | 7.41 | 7.41 | 0.00 | 4.85 |
452 | 453 | 2.033448 | TTTGATTCGTGCGGGCCT | 59.967 | 55.556 | 0.84 | 0.00 | 0.00 | 5.19 |
453 | 454 | 1.582610 | TTCTTTGATTCGTGCGGGCC | 61.583 | 55.000 | 0.00 | 0.00 | 0.00 | 5.80 |
454 | 455 | 0.451783 | ATTCTTTGATTCGTGCGGGC | 59.548 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
455 | 456 | 2.009774 | AGATTCTTTGATTCGTGCGGG | 58.990 | 47.619 | 0.00 | 0.00 | 0.00 | 6.13 |
456 | 457 | 4.766007 | CATAGATTCTTTGATTCGTGCGG | 58.234 | 43.478 | 0.00 | 0.00 | 0.00 | 5.69 |
457 | 458 | 4.206843 | GCATAGATTCTTTGATTCGTGCG | 58.793 | 43.478 | 8.14 | 0.00 | 0.00 | 5.34 |
458 | 459 | 4.206843 | CGCATAGATTCTTTGATTCGTGC | 58.793 | 43.478 | 8.14 | 0.00 | 31.77 | 5.34 |
459 | 460 | 5.395325 | ACGCATAGATTCTTTGATTCGTG | 57.605 | 39.130 | 8.14 | 0.00 | 0.00 | 4.35 |
460 | 461 | 4.207224 | CGACGCATAGATTCTTTGATTCGT | 59.793 | 41.667 | 8.14 | 7.81 | 0.00 | 3.85 |
461 | 462 | 4.207224 | ACGACGCATAGATTCTTTGATTCG | 59.793 | 41.667 | 17.88 | 17.88 | 30.86 | 3.34 |
462 | 463 | 5.643339 | ACGACGCATAGATTCTTTGATTC | 57.357 | 39.130 | 8.14 | 2.89 | 0.00 | 2.52 |
463 | 464 | 5.351465 | ACAACGACGCATAGATTCTTTGATT | 59.649 | 36.000 | 8.14 | 0.00 | 0.00 | 2.57 |
464 | 465 | 4.870426 | ACAACGACGCATAGATTCTTTGAT | 59.130 | 37.500 | 8.14 | 0.00 | 0.00 | 2.57 |
465 | 466 | 4.242475 | ACAACGACGCATAGATTCTTTGA | 58.758 | 39.130 | 8.14 | 0.00 | 0.00 | 2.69 |
466 | 467 | 4.584029 | ACAACGACGCATAGATTCTTTG | 57.416 | 40.909 | 0.00 | 0.00 | 0.00 | 2.77 |
467 | 468 | 4.565564 | GGTACAACGACGCATAGATTCTTT | 59.434 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
468 | 469 | 4.110482 | GGTACAACGACGCATAGATTCTT | 58.890 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
469 | 470 | 3.380637 | AGGTACAACGACGCATAGATTCT | 59.619 | 43.478 | 0.00 | 0.00 | 0.00 | 2.40 |
470 | 471 | 3.703420 | AGGTACAACGACGCATAGATTC | 58.297 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
471 | 472 | 3.795623 | AGGTACAACGACGCATAGATT | 57.204 | 42.857 | 0.00 | 0.00 | 0.00 | 2.40 |
472 | 473 | 3.129813 | TCAAGGTACAACGACGCATAGAT | 59.870 | 43.478 | 0.00 | 0.00 | 0.00 | 1.98 |
473 | 474 | 2.488937 | TCAAGGTACAACGACGCATAGA | 59.511 | 45.455 | 0.00 | 0.00 | 0.00 | 1.98 |
474 | 475 | 2.871133 | TCAAGGTACAACGACGCATAG | 58.129 | 47.619 | 0.00 | 0.00 | 0.00 | 2.23 |
475 | 476 | 3.513680 | ATCAAGGTACAACGACGCATA | 57.486 | 42.857 | 0.00 | 0.00 | 0.00 | 3.14 |
476 | 477 | 2.380084 | ATCAAGGTACAACGACGCAT | 57.620 | 45.000 | 0.00 | 0.00 | 0.00 | 4.73 |
477 | 478 | 2.030096 | TGTATCAAGGTACAACGACGCA | 60.030 | 45.455 | 0.00 | 0.00 | 31.96 | 5.24 |
478 | 479 | 2.343544 | GTGTATCAAGGTACAACGACGC | 59.656 | 50.000 | 0.00 | 0.00 | 36.42 | 5.19 |
479 | 480 | 3.829948 | AGTGTATCAAGGTACAACGACG | 58.170 | 45.455 | 0.00 | 0.00 | 36.42 | 5.12 |
480 | 481 | 5.570589 | GTGTAGTGTATCAAGGTACAACGAC | 59.429 | 44.000 | 0.00 | 0.00 | 36.42 | 4.34 |
481 | 482 | 5.335897 | GGTGTAGTGTATCAAGGTACAACGA | 60.336 | 44.000 | 0.00 | 0.00 | 36.42 | 3.85 |
482 | 483 | 4.860907 | GGTGTAGTGTATCAAGGTACAACG | 59.139 | 45.833 | 0.00 | 0.00 | 36.42 | 4.10 |
483 | 484 | 4.860907 | CGGTGTAGTGTATCAAGGTACAAC | 59.139 | 45.833 | 0.00 | 0.00 | 36.42 | 3.32 |
484 | 485 | 4.766373 | TCGGTGTAGTGTATCAAGGTACAA | 59.234 | 41.667 | 0.00 | 0.00 | 36.42 | 2.41 |
485 | 486 | 4.334552 | TCGGTGTAGTGTATCAAGGTACA | 58.665 | 43.478 | 0.00 | 0.00 | 32.43 | 2.90 |
486 | 487 | 4.201990 | CCTCGGTGTAGTGTATCAAGGTAC | 60.202 | 50.000 | 0.00 | 0.00 | 0.00 | 3.34 |
487 | 488 | 3.949754 | CCTCGGTGTAGTGTATCAAGGTA | 59.050 | 47.826 | 0.00 | 0.00 | 0.00 | 3.08 |
488 | 489 | 2.758979 | CCTCGGTGTAGTGTATCAAGGT | 59.241 | 50.000 | 0.00 | 0.00 | 0.00 | 3.50 |
489 | 490 | 2.758979 | ACCTCGGTGTAGTGTATCAAGG | 59.241 | 50.000 | 0.00 | 0.00 | 0.00 | 3.61 |
490 | 491 | 3.442625 | TGACCTCGGTGTAGTGTATCAAG | 59.557 | 47.826 | 0.00 | 0.00 | 0.00 | 3.02 |
491 | 492 | 3.423749 | TGACCTCGGTGTAGTGTATCAA | 58.576 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
492 | 493 | 3.076079 | TGACCTCGGTGTAGTGTATCA | 57.924 | 47.619 | 0.00 | 0.00 | 0.00 | 2.15 |
493 | 494 | 3.734293 | GCTTGACCTCGGTGTAGTGTATC | 60.734 | 52.174 | 0.00 | 0.00 | 0.00 | 2.24 |
494 | 495 | 2.165845 | GCTTGACCTCGGTGTAGTGTAT | 59.834 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
495 | 496 | 1.542915 | GCTTGACCTCGGTGTAGTGTA | 59.457 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
496 | 497 | 0.317479 | GCTTGACCTCGGTGTAGTGT | 59.683 | 55.000 | 0.00 | 0.00 | 0.00 | 3.55 |
497 | 498 | 0.317160 | TGCTTGACCTCGGTGTAGTG | 59.683 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
498 | 499 | 1.204941 | GATGCTTGACCTCGGTGTAGT | 59.795 | 52.381 | 0.00 | 0.00 | 0.00 | 2.73 |
499 | 500 | 1.471676 | GGATGCTTGACCTCGGTGTAG | 60.472 | 57.143 | 0.00 | 0.00 | 0.00 | 2.74 |
500 | 501 | 0.535335 | GGATGCTTGACCTCGGTGTA | 59.465 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
501 | 502 | 1.194781 | AGGATGCTTGACCTCGGTGT | 61.195 | 55.000 | 0.00 | 0.00 | 0.00 | 4.16 |
502 | 503 | 0.824109 | TAGGATGCTTGACCTCGGTG | 59.176 | 55.000 | 0.00 | 0.00 | 37.68 | 4.94 |
503 | 504 | 1.115467 | CTAGGATGCTTGACCTCGGT | 58.885 | 55.000 | 0.00 | 0.00 | 37.68 | 4.69 |
504 | 505 | 0.390860 | CCTAGGATGCTTGACCTCGG | 59.609 | 60.000 | 1.05 | 0.00 | 37.68 | 4.63 |
505 | 506 | 1.115467 | ACCTAGGATGCTTGACCTCG | 58.885 | 55.000 | 17.98 | 0.00 | 37.68 | 4.63 |
506 | 507 | 1.834263 | ACACCTAGGATGCTTGACCTC | 59.166 | 52.381 | 17.98 | 0.00 | 37.68 | 3.85 |
507 | 508 | 1.958288 | ACACCTAGGATGCTTGACCT | 58.042 | 50.000 | 17.98 | 0.00 | 39.95 | 3.85 |
508 | 509 | 2.789409 | AACACCTAGGATGCTTGACC | 57.211 | 50.000 | 17.98 | 0.00 | 0.00 | 4.02 |
509 | 510 | 4.327680 | AGAAAACACCTAGGATGCTTGAC | 58.672 | 43.478 | 17.98 | 6.37 | 0.00 | 3.18 |
510 | 511 | 4.041567 | TGAGAAAACACCTAGGATGCTTGA | 59.958 | 41.667 | 17.98 | 0.00 | 0.00 | 3.02 |
511 | 512 | 4.326826 | TGAGAAAACACCTAGGATGCTTG | 58.673 | 43.478 | 17.98 | 5.14 | 0.00 | 4.01 |
512 | 513 | 4.640771 | TGAGAAAACACCTAGGATGCTT | 57.359 | 40.909 | 17.98 | 5.03 | 0.00 | 3.91 |
513 | 514 | 4.521146 | CATGAGAAAACACCTAGGATGCT | 58.479 | 43.478 | 17.98 | 2.13 | 0.00 | 3.79 |
514 | 515 | 3.629398 | CCATGAGAAAACACCTAGGATGC | 59.371 | 47.826 | 17.98 | 0.00 | 0.00 | 3.91 |
515 | 516 | 4.202441 | CCCATGAGAAAACACCTAGGATG | 58.798 | 47.826 | 17.98 | 12.55 | 0.00 | 3.51 |
516 | 517 | 3.372025 | GCCCATGAGAAAACACCTAGGAT | 60.372 | 47.826 | 17.98 | 0.00 | 0.00 | 3.24 |
517 | 518 | 2.026262 | GCCCATGAGAAAACACCTAGGA | 60.026 | 50.000 | 17.98 | 0.00 | 0.00 | 2.94 |
518 | 519 | 2.025887 | AGCCCATGAGAAAACACCTAGG | 60.026 | 50.000 | 7.41 | 7.41 | 0.00 | 3.02 |
519 | 520 | 3.356529 | AGCCCATGAGAAAACACCTAG | 57.643 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
520 | 521 | 3.806949 | AAGCCCATGAGAAAACACCTA | 57.193 | 42.857 | 0.00 | 0.00 | 0.00 | 3.08 |
521 | 522 | 2.683211 | AAGCCCATGAGAAAACACCT | 57.317 | 45.000 | 0.00 | 0.00 | 0.00 | 4.00 |
574 | 575 | 2.353889 | GTCAACTACGTCGCTCCTCATA | 59.646 | 50.000 | 0.00 | 0.00 | 0.00 | 2.15 |
650 | 651 | 3.306641 | GCATTTCATGGTTAAACAGGGCA | 60.307 | 43.478 | 5.16 | 0.00 | 0.00 | 5.36 |
707 | 708 | 1.418637 | GGATAACTAATGGGTCCCGCA | 59.581 | 52.381 | 2.65 | 0.00 | 0.00 | 5.69 |
955 | 1035 | 3.594568 | CGGCACTGGACCGTACTA | 58.405 | 61.111 | 2.82 | 0.00 | 45.70 | 1.82 |
1010 | 1090 | 1.326245 | TCACACAAGTCAAACGCTTCG | 59.674 | 47.619 | 0.00 | 0.00 | 0.00 | 3.79 |
1288 | 1728 | 5.106830 | CCCAAAATTGAAATTGAGCTCTTGC | 60.107 | 40.000 | 16.19 | 0.57 | 40.05 | 4.01 |
1336 | 1878 | 3.674997 | GGCTCTGTCTACCAAATGTGAA | 58.325 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
1348 | 1890 | 0.466372 | TCATCGGATCGGCTCTGTCT | 60.466 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1434 | 1976 | 3.409851 | TCATATTTGCTTGCTGCTTCG | 57.590 | 42.857 | 0.00 | 0.00 | 43.37 | 3.79 |
1516 | 2060 | 8.374327 | ACTAAAACTGTAACAATTTCTAGCGT | 57.626 | 30.769 | 0.00 | 0.00 | 0.00 | 5.07 |
1689 | 2234 | 7.851228 | TCGCATCCTATTACCAGAATATCAAT | 58.149 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
1690 | 2235 | 7.239763 | TCGCATCCTATTACCAGAATATCAA | 57.760 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1756 | 2302 | 7.337942 | AGAACAAAGAATGAACACTGGATATCC | 59.662 | 37.037 | 15.39 | 15.39 | 0.00 | 2.59 |
1773 | 2319 | 8.330466 | TGTTAACTGAAGAACAAGAACAAAGA | 57.670 | 30.769 | 7.22 | 0.00 | 32.74 | 2.52 |
1886 | 2433 | 4.832608 | CCTACGCGGGTGGGCTTC | 62.833 | 72.222 | 21.73 | 0.00 | 38.03 | 3.86 |
1944 | 2492 | 7.662897 | AGGTTTTGGTCGAAGCATTTATTTTA | 58.337 | 30.769 | 0.00 | 0.00 | 0.00 | 1.52 |
1949 | 2499 | 4.138290 | TGAGGTTTTGGTCGAAGCATTTA | 58.862 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
1950 | 2500 | 2.955660 | TGAGGTTTTGGTCGAAGCATTT | 59.044 | 40.909 | 0.00 | 0.00 | 0.00 | 2.32 |
2046 | 2596 | 5.637387 | GCCCAACATTTATTCGACACAAAAT | 59.363 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2095 | 2646 | 7.538678 | GTGGACAAGCAACAAATATGTAAAGAG | 59.461 | 37.037 | 0.00 | 0.00 | 39.40 | 2.85 |
2125 | 2676 | 8.891671 | ACATGCATAAAAAGAATCACAAAACT | 57.108 | 26.923 | 0.00 | 0.00 | 0.00 | 2.66 |
2279 | 2830 | 4.502950 | GGTTTGAATTTCACATCTGGCCAA | 60.503 | 41.667 | 7.01 | 0.00 | 0.00 | 4.52 |
2330 | 2881 | 5.546526 | TGGATTAACTGAAATGCCCAAAAC | 58.453 | 37.500 | 0.00 | 0.00 | 0.00 | 2.43 |
2366 | 2917 | 4.658071 | CGGGTTATCAACATGCAACTAAC | 58.342 | 43.478 | 0.00 | 0.00 | 0.00 | 2.34 |
2379 | 2930 | 2.635915 | CCCCTATACTTGCGGGTTATCA | 59.364 | 50.000 | 0.00 | 0.00 | 36.18 | 2.15 |
2380 | 2931 | 2.901839 | TCCCCTATACTTGCGGGTTATC | 59.098 | 50.000 | 0.00 | 0.00 | 36.84 | 1.75 |
2381 | 2932 | 2.980548 | TCCCCTATACTTGCGGGTTAT | 58.019 | 47.619 | 0.00 | 0.00 | 36.84 | 1.89 |
2382 | 2933 | 2.475339 | TCCCCTATACTTGCGGGTTA | 57.525 | 50.000 | 0.00 | 0.00 | 36.84 | 2.85 |
2383 | 2934 | 1.697982 | GATCCCCTATACTTGCGGGTT | 59.302 | 52.381 | 0.00 | 0.00 | 36.84 | 4.11 |
2384 | 2935 | 1.349067 | GATCCCCTATACTTGCGGGT | 58.651 | 55.000 | 0.00 | 0.00 | 36.84 | 5.28 |
2385 | 2936 | 0.246635 | CGATCCCCTATACTTGCGGG | 59.753 | 60.000 | 0.00 | 0.00 | 37.73 | 6.13 |
2386 | 2937 | 0.389948 | GCGATCCCCTATACTTGCGG | 60.390 | 60.000 | 0.00 | 0.00 | 0.00 | 5.69 |
2387 | 2938 | 0.317160 | TGCGATCCCCTATACTTGCG | 59.683 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2388 | 2939 | 2.143925 | GTTGCGATCCCCTATACTTGC | 58.856 | 52.381 | 0.00 | 0.00 | 0.00 | 4.01 |
2389 | 2940 | 3.181465 | ACTGTTGCGATCCCCTATACTTG | 60.181 | 47.826 | 0.00 | 0.00 | 0.00 | 3.16 |
2390 | 2941 | 3.039011 | ACTGTTGCGATCCCCTATACTT | 58.961 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
2391 | 2942 | 2.679082 | ACTGTTGCGATCCCCTATACT | 58.321 | 47.619 | 0.00 | 0.00 | 0.00 | 2.12 |
2392 | 2943 | 3.470645 | AACTGTTGCGATCCCCTATAC | 57.529 | 47.619 | 0.00 | 0.00 | 0.00 | 1.47 |
2393 | 2944 | 4.448210 | GAAAACTGTTGCGATCCCCTATA | 58.552 | 43.478 | 0.00 | 0.00 | 0.00 | 1.31 |
2394 | 2945 | 3.279434 | GAAAACTGTTGCGATCCCCTAT | 58.721 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
2395 | 2946 | 2.706890 | GAAAACTGTTGCGATCCCCTA | 58.293 | 47.619 | 0.00 | 0.00 | 0.00 | 3.53 |
2396 | 2947 | 1.534729 | GAAAACTGTTGCGATCCCCT | 58.465 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2397 | 2948 | 0.168128 | CGAAAACTGTTGCGATCCCC | 59.832 | 55.000 | 9.57 | 0.00 | 38.11 | 4.81 |
2398 | 2949 | 1.128692 | CTCGAAAACTGTTGCGATCCC | 59.871 | 52.381 | 15.79 | 0.00 | 43.94 | 3.85 |
2399 | 2950 | 1.128692 | CCTCGAAAACTGTTGCGATCC | 59.871 | 52.381 | 15.79 | 0.00 | 43.94 | 3.36 |
2400 | 2951 | 1.128692 | CCCTCGAAAACTGTTGCGATC | 59.871 | 52.381 | 15.79 | 3.49 | 43.94 | 3.69 |
2401 | 2952 | 1.156736 | CCCTCGAAAACTGTTGCGAT | 58.843 | 50.000 | 15.79 | 0.00 | 43.94 | 4.58 |
2402 | 2953 | 0.179067 | ACCCTCGAAAACTGTTGCGA | 60.179 | 50.000 | 14.99 | 14.99 | 42.74 | 5.10 |
2403 | 2954 | 1.459592 | CTACCCTCGAAAACTGTTGCG | 59.540 | 52.381 | 9.05 | 9.05 | 37.10 | 4.85 |
2404 | 2955 | 2.737252 | CTCTACCCTCGAAAACTGTTGC | 59.263 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
2405 | 2956 | 3.991367 | ACTCTACCCTCGAAAACTGTTG | 58.009 | 45.455 | 0.00 | 0.00 | 0.00 | 3.33 |
2406 | 2957 | 5.997384 | ATACTCTACCCTCGAAAACTGTT | 57.003 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
2407 | 2958 | 5.479375 | TGAATACTCTACCCTCGAAAACTGT | 59.521 | 40.000 | 0.00 | 0.00 | 0.00 | 3.55 |
2408 | 2959 | 5.962433 | TGAATACTCTACCCTCGAAAACTG | 58.038 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
2409 | 2960 | 6.396450 | GTTGAATACTCTACCCTCGAAAACT | 58.604 | 40.000 | 0.00 | 0.00 | 0.00 | 2.66 |
2410 | 2961 | 5.579904 | GGTTGAATACTCTACCCTCGAAAAC | 59.420 | 44.000 | 0.00 | 0.00 | 40.45 | 2.43 |
2411 | 2962 | 5.727434 | GGTTGAATACTCTACCCTCGAAAA | 58.273 | 41.667 | 0.00 | 0.00 | 40.45 | 2.29 |
2412 | 2963 | 5.334724 | GGTTGAATACTCTACCCTCGAAA | 57.665 | 43.478 | 0.00 | 0.00 | 40.45 | 3.46 |
2413 | 2964 | 4.996788 | GGTTGAATACTCTACCCTCGAA | 57.003 | 45.455 | 0.00 | 0.00 | 40.45 | 3.71 |
2424 | 2975 | 9.801873 | CGAATCAATAAATTTGGGTTGAATACT | 57.198 | 29.630 | 15.01 | 5.42 | 34.62 | 2.12 |
2425 | 2976 | 9.796120 | TCGAATCAATAAATTTGGGTTGAATAC | 57.204 | 29.630 | 15.01 | 10.41 | 34.62 | 1.89 |
2426 | 2977 | 9.796120 | GTCGAATCAATAAATTTGGGTTGAATA | 57.204 | 29.630 | 15.01 | 4.16 | 34.62 | 1.75 |
2427 | 2978 | 8.310382 | TGTCGAATCAATAAATTTGGGTTGAAT | 58.690 | 29.630 | 15.01 | 9.74 | 34.62 | 2.57 |
2428 | 2979 | 7.596995 | GTGTCGAATCAATAAATTTGGGTTGAA | 59.403 | 33.333 | 15.01 | 2.31 | 34.62 | 2.69 |
2429 | 2980 | 7.087639 | GTGTCGAATCAATAAATTTGGGTTGA | 58.912 | 34.615 | 14.00 | 14.00 | 35.33 | 3.18 |
2430 | 2981 | 6.865726 | TGTGTCGAATCAATAAATTTGGGTTG | 59.134 | 34.615 | 0.00 | 3.99 | 0.00 | 3.77 |
2431 | 2982 | 6.987386 | TGTGTCGAATCAATAAATTTGGGTT | 58.013 | 32.000 | 0.00 | 0.00 | 0.00 | 4.11 |
2432 | 2983 | 6.582677 | TGTGTCGAATCAATAAATTTGGGT | 57.417 | 33.333 | 0.00 | 0.00 | 0.00 | 4.51 |
2433 | 2984 | 6.531240 | CCTTGTGTCGAATCAATAAATTTGGG | 59.469 | 38.462 | 0.00 | 0.00 | 0.00 | 4.12 |
2434 | 2985 | 6.531240 | CCCTTGTGTCGAATCAATAAATTTGG | 59.469 | 38.462 | 0.00 | 1.78 | 0.00 | 3.28 |
2435 | 2986 | 7.312154 | TCCCTTGTGTCGAATCAATAAATTTG | 58.688 | 34.615 | 0.00 | 0.00 | 0.00 | 2.32 |
2436 | 2987 | 7.461182 | TCCCTTGTGTCGAATCAATAAATTT | 57.539 | 32.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2437 | 2988 | 6.404734 | GCTCCCTTGTGTCGAATCAATAAATT | 60.405 | 38.462 | 4.42 | 0.00 | 0.00 | 1.82 |
2438 | 2989 | 5.066505 | GCTCCCTTGTGTCGAATCAATAAAT | 59.933 | 40.000 | 4.42 | 0.00 | 0.00 | 1.40 |
2439 | 2990 | 4.394920 | GCTCCCTTGTGTCGAATCAATAAA | 59.605 | 41.667 | 4.42 | 0.00 | 0.00 | 1.40 |
2440 | 2991 | 3.938963 | GCTCCCTTGTGTCGAATCAATAA | 59.061 | 43.478 | 4.42 | 0.00 | 0.00 | 1.40 |
2441 | 2992 | 3.531538 | GCTCCCTTGTGTCGAATCAATA | 58.468 | 45.455 | 4.42 | 0.00 | 0.00 | 1.90 |
2442 | 2993 | 2.359900 | GCTCCCTTGTGTCGAATCAAT | 58.640 | 47.619 | 4.42 | 0.00 | 0.00 | 2.57 |
2443 | 2994 | 1.610624 | GGCTCCCTTGTGTCGAATCAA | 60.611 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
2444 | 2995 | 0.036388 | GGCTCCCTTGTGTCGAATCA | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2445 | 2996 | 0.036388 | TGGCTCCCTTGTGTCGAATC | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 2.52 |
2446 | 2997 | 0.400213 | TTGGCTCCCTTGTGTCGAAT | 59.600 | 50.000 | 0.00 | 0.00 | 0.00 | 3.34 |
2447 | 2998 | 0.181587 | TTTGGCTCCCTTGTGTCGAA | 59.818 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
2448 | 2999 | 0.250295 | CTTTGGCTCCCTTGTGTCGA | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
2449 | 3000 | 0.250295 | TCTTTGGCTCCCTTGTGTCG | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
2450 | 3001 | 2.206576 | ATCTTTGGCTCCCTTGTGTC | 57.793 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
2451 | 3002 | 2.683211 | AATCTTTGGCTCCCTTGTGT | 57.317 | 45.000 | 0.00 | 0.00 | 0.00 | 3.72 |
2452 | 3003 | 4.952335 | AGAATAATCTTTGGCTCCCTTGTG | 59.048 | 41.667 | 0.00 | 0.00 | 29.15 | 3.33 |
2453 | 3004 | 5.196695 | GAGAATAATCTTTGGCTCCCTTGT | 58.803 | 41.667 | 0.00 | 0.00 | 35.54 | 3.16 |
2454 | 3005 | 5.195940 | TGAGAATAATCTTTGGCTCCCTTG | 58.804 | 41.667 | 0.00 | 0.00 | 35.54 | 3.61 |
2455 | 3006 | 5.456921 | TGAGAATAATCTTTGGCTCCCTT | 57.543 | 39.130 | 0.00 | 0.00 | 35.54 | 3.95 |
2456 | 3007 | 5.044550 | ACTTGAGAATAATCTTTGGCTCCCT | 60.045 | 40.000 | 0.00 | 0.00 | 35.54 | 4.20 |
2457 | 3008 | 5.196695 | ACTTGAGAATAATCTTTGGCTCCC | 58.803 | 41.667 | 0.00 | 0.00 | 35.54 | 4.30 |
2458 | 3009 | 8.457238 | AATACTTGAGAATAATCTTTGGCTCC | 57.543 | 34.615 | 0.00 | 0.00 | 35.54 | 4.70 |
2460 | 3011 | 9.061435 | GCTAATACTTGAGAATAATCTTTGGCT | 57.939 | 33.333 | 0.00 | 0.00 | 35.54 | 4.75 |
2461 | 3012 | 8.840321 | TGCTAATACTTGAGAATAATCTTTGGC | 58.160 | 33.333 | 0.00 | 0.00 | 35.54 | 4.52 |
2463 | 3014 | 9.875675 | GCTGCTAATACTTGAGAATAATCTTTG | 57.124 | 33.333 | 0.00 | 0.00 | 35.54 | 2.77 |
2464 | 3015 | 9.844257 | AGCTGCTAATACTTGAGAATAATCTTT | 57.156 | 29.630 | 0.00 | 0.00 | 35.54 | 2.52 |
2465 | 3016 | 9.270640 | CAGCTGCTAATACTTGAGAATAATCTT | 57.729 | 33.333 | 0.00 | 0.00 | 35.54 | 2.40 |
2466 | 3017 | 8.646004 | TCAGCTGCTAATACTTGAGAATAATCT | 58.354 | 33.333 | 9.47 | 0.00 | 39.10 | 2.40 |
2467 | 3018 | 8.824159 | TCAGCTGCTAATACTTGAGAATAATC | 57.176 | 34.615 | 9.47 | 0.00 | 0.00 | 1.75 |
2468 | 3019 | 8.428063 | ACTCAGCTGCTAATACTTGAGAATAAT | 58.572 | 33.333 | 9.47 | 0.00 | 0.00 | 1.28 |
2469 | 3020 | 7.786030 | ACTCAGCTGCTAATACTTGAGAATAA | 58.214 | 34.615 | 9.47 | 0.00 | 0.00 | 1.40 |
2470 | 3021 | 7.353414 | ACTCAGCTGCTAATACTTGAGAATA | 57.647 | 36.000 | 9.47 | 0.00 | 0.00 | 1.75 |
2471 | 3022 | 6.232581 | ACTCAGCTGCTAATACTTGAGAAT | 57.767 | 37.500 | 9.47 | 0.00 | 0.00 | 2.40 |
2472 | 3023 | 5.667539 | ACTCAGCTGCTAATACTTGAGAA | 57.332 | 39.130 | 9.47 | 0.00 | 0.00 | 2.87 |
2473 | 3024 | 5.047021 | ACAACTCAGCTGCTAATACTTGAGA | 60.047 | 40.000 | 9.47 | 1.04 | 0.00 | 3.27 |
2474 | 3025 | 5.174395 | ACAACTCAGCTGCTAATACTTGAG | 58.826 | 41.667 | 9.47 | 6.55 | 0.00 | 3.02 |
2475 | 3026 | 5.152623 | ACAACTCAGCTGCTAATACTTGA | 57.847 | 39.130 | 9.47 | 0.00 | 0.00 | 3.02 |
2476 | 3027 | 4.931601 | TGACAACTCAGCTGCTAATACTTG | 59.068 | 41.667 | 9.47 | 4.80 | 0.00 | 3.16 |
2477 | 3028 | 5.152623 | TGACAACTCAGCTGCTAATACTT | 57.847 | 39.130 | 9.47 | 0.00 | 0.00 | 2.24 |
2478 | 3029 | 4.808414 | TGACAACTCAGCTGCTAATACT | 57.192 | 40.909 | 9.47 | 0.00 | 0.00 | 2.12 |
2479 | 3030 | 6.092670 | TGAATTGACAACTCAGCTGCTAATAC | 59.907 | 38.462 | 9.47 | 0.00 | 0.00 | 1.89 |
2480 | 3031 | 6.172630 | TGAATTGACAACTCAGCTGCTAATA | 58.827 | 36.000 | 9.47 | 0.00 | 0.00 | 0.98 |
2481 | 3032 | 5.005740 | TGAATTGACAACTCAGCTGCTAAT | 58.994 | 37.500 | 9.47 | 0.00 | 0.00 | 1.73 |
2482 | 3033 | 4.388485 | TGAATTGACAACTCAGCTGCTAA | 58.612 | 39.130 | 9.47 | 0.00 | 0.00 | 3.09 |
2483 | 3034 | 4.006780 | TGAATTGACAACTCAGCTGCTA | 57.993 | 40.909 | 9.47 | 0.00 | 0.00 | 3.49 |
2484 | 3035 | 2.854963 | TGAATTGACAACTCAGCTGCT | 58.145 | 42.857 | 9.47 | 0.00 | 0.00 | 4.24 |
2485 | 3036 | 3.303406 | GTTGAATTGACAACTCAGCTGC | 58.697 | 45.455 | 9.47 | 0.00 | 44.34 | 5.25 |
2486 | 3037 | 3.316029 | TGGTTGAATTGACAACTCAGCTG | 59.684 | 43.478 | 7.63 | 7.63 | 46.17 | 4.24 |
2487 | 3038 | 3.316308 | GTGGTTGAATTGACAACTCAGCT | 59.684 | 43.478 | 12.25 | 0.00 | 46.17 | 4.24 |
2488 | 3039 | 3.066621 | TGTGGTTGAATTGACAACTCAGC | 59.933 | 43.478 | 5.07 | 5.07 | 46.17 | 4.26 |
2489 | 3040 | 4.498009 | GGTGTGGTTGAATTGACAACTCAG | 60.498 | 45.833 | 0.00 | 0.00 | 46.17 | 3.35 |
2490 | 3041 | 3.380004 | GGTGTGGTTGAATTGACAACTCA | 59.620 | 43.478 | 9.21 | 0.00 | 46.17 | 3.41 |
2491 | 3042 | 3.632145 | AGGTGTGGTTGAATTGACAACTC | 59.368 | 43.478 | 9.21 | 0.00 | 46.17 | 3.01 |
2492 | 3043 | 3.381272 | CAGGTGTGGTTGAATTGACAACT | 59.619 | 43.478 | 9.21 | 0.00 | 46.17 | 3.16 |
2493 | 3044 | 3.490761 | CCAGGTGTGGTTGAATTGACAAC | 60.491 | 47.826 | 0.00 | 0.00 | 46.20 | 3.32 |
2494 | 3045 | 2.692557 | CCAGGTGTGGTTGAATTGACAA | 59.307 | 45.455 | 0.00 | 0.00 | 39.30 | 3.18 |
2495 | 3046 | 2.092158 | TCCAGGTGTGGTTGAATTGACA | 60.092 | 45.455 | 0.00 | 0.00 | 45.28 | 3.58 |
2496 | 3047 | 2.582052 | TCCAGGTGTGGTTGAATTGAC | 58.418 | 47.619 | 0.00 | 0.00 | 45.28 | 3.18 |
2497 | 3048 | 3.524095 | ATCCAGGTGTGGTTGAATTGA | 57.476 | 42.857 | 0.00 | 0.00 | 45.28 | 2.57 |
2498 | 3049 | 4.766891 | AGTTATCCAGGTGTGGTTGAATTG | 59.233 | 41.667 | 0.00 | 0.00 | 45.28 | 2.32 |
2499 | 3050 | 4.998051 | AGTTATCCAGGTGTGGTTGAATT | 58.002 | 39.130 | 0.00 | 0.00 | 45.28 | 2.17 |
2500 | 3051 | 4.657814 | AGTTATCCAGGTGTGGTTGAAT | 57.342 | 40.909 | 0.00 | 0.00 | 45.28 | 2.57 |
2501 | 3052 | 4.447138 | AAGTTATCCAGGTGTGGTTGAA | 57.553 | 40.909 | 0.00 | 0.00 | 45.28 | 2.69 |

Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.