Multiple sequence alignment - TraesCS7D01G106800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G106800 chr7D 100.000 3609 0 0 1 3609 64469182 64465574 0.000000e+00 6665.0
1 TraesCS7D01G106800 chr7D 77.628 666 139 8 1664 2321 64735992 64735329 2.610000e-106 396.0
2 TraesCS7D01G106800 chr7D 75.795 723 101 37 186 877 64433591 64432912 7.580000e-77 298.0
3 TraesCS7D01G106800 chr7A 90.116 1902 143 33 1 1871 68321801 68319914 0.000000e+00 2429.0
4 TraesCS7D01G106800 chr7A 89.286 784 59 18 2121 2879 68319882 68319099 0.000000e+00 959.0
5 TraesCS7D01G106800 chr7A 86.313 358 43 6 932 1284 68901984 68901628 5.650000e-103 385.0
6 TraesCS7D01G106800 chr7A 77.134 656 140 8 1674 2321 68901259 68900606 4.400000e-99 372.0
7 TraesCS7D01G106800 chr7A 88.015 267 22 7 3350 3609 68310678 68310415 1.260000e-79 307.0
8 TraesCS7D01G106800 chr7A 73.563 783 112 48 53 806 68223814 68223098 1.020000e-50 211.0
9 TraesCS7D01G106800 chr7B 85.987 2305 206 60 185 2428 6035518 6033270 0.000000e+00 2359.0
10 TraesCS7D01G106800 chr7B 91.429 490 37 4 2422 2907 6033244 6032756 0.000000e+00 667.0
11 TraesCS7D01G106800 chr7B 80.208 576 73 24 925 1480 7541416 7541970 9.390000e-106 394.0
12 TraesCS7D01G106800 chr7B 78.261 598 127 2 1674 2268 6374358 6373761 7.310000e-102 381.0
13 TraesCS7D01G106800 chr7B 85.165 364 45 7 925 1284 6375075 6374717 7.360000e-97 364.0
14 TraesCS7D01G106800 chr7B 74.829 731 113 39 183 878 5962312 5961618 7.680000e-67 265.0
15 TraesCS7D01G106800 chr7B 87.302 126 15 1 52 176 6036590 6036465 3.760000e-30 143.0
16 TraesCS7D01G106800 chrUn 76.516 775 139 30 1666 2424 93939466 93940213 2.030000e-102 383.0
17 TraesCS7D01G106800 chrUn 76.056 710 148 15 1731 2428 93870113 93870812 2.060000e-92 350.0
18 TraesCS7D01G106800 chr6B 78.704 540 107 7 1743 2278 42861327 42861862 1.590000e-93 353.0
19 TraesCS7D01G106800 chr6B 75.740 709 152 12 1731 2428 42856186 42856885 4.460000e-89 339.0
20 TraesCS7D01G106800 chr6B 90.310 258 23 2 1026 1282 43090146 43089890 1.610000e-88 337.0
21 TraesCS7D01G106800 chr6B 89.231 260 28 0 1007 1266 42860624 42860883 3.470000e-85 326.0
22 TraesCS7D01G106800 chr6B 87.153 288 33 4 996 1282 42855510 42855794 1.250000e-84 324.0
23 TraesCS7D01G106800 chr6A 85.906 298 34 8 992 1285 24573868 24574161 9.730000e-81 311.0
24 TraesCS7D01G106800 chr5B 94.872 39 2 0 203 241 697301586 697301624 1.080000e-05 62.1
25 TraesCS7D01G106800 chr4B 100.000 28 0 0 213 240 44918644 44918671 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G106800 chr7D 64465574 64469182 3608 True 6665.000000 6665 100.000000 1 3609 1 chr7D.!!$R2 3608
1 TraesCS7D01G106800 chr7D 64735329 64735992 663 True 396.000000 396 77.628000 1664 2321 1 chr7D.!!$R3 657
2 TraesCS7D01G106800 chr7D 64432912 64433591 679 True 298.000000 298 75.795000 186 877 1 chr7D.!!$R1 691
3 TraesCS7D01G106800 chr7A 68319099 68321801 2702 True 1694.000000 2429 89.701000 1 2879 2 chr7A.!!$R3 2878
4 TraesCS7D01G106800 chr7A 68900606 68901984 1378 True 378.500000 385 81.723500 932 2321 2 chr7A.!!$R4 1389
5 TraesCS7D01G106800 chr7A 68223098 68223814 716 True 211.000000 211 73.563000 53 806 1 chr7A.!!$R1 753
6 TraesCS7D01G106800 chr7B 6032756 6036590 3834 True 1056.333333 2359 88.239333 52 2907 3 chr7B.!!$R2 2855
7 TraesCS7D01G106800 chr7B 7541416 7541970 554 False 394.000000 394 80.208000 925 1480 1 chr7B.!!$F1 555
8 TraesCS7D01G106800 chr7B 6373761 6375075 1314 True 372.500000 381 81.713000 925 2268 2 chr7B.!!$R3 1343
9 TraesCS7D01G106800 chr7B 5961618 5962312 694 True 265.000000 265 74.829000 183 878 1 chr7B.!!$R1 695
10 TraesCS7D01G106800 chrUn 93939466 93940213 747 False 383.000000 383 76.516000 1666 2424 1 chrUn.!!$F2 758
11 TraesCS7D01G106800 chrUn 93870113 93870812 699 False 350.000000 350 76.056000 1731 2428 1 chrUn.!!$F1 697
12 TraesCS7D01G106800 chr6B 42855510 42861862 6352 False 335.500000 353 82.707000 996 2428 4 chr6B.!!$F1 1432

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
91 93 0.177141 GCCAGCTACCACGTTATCCA 59.823 55.000 0.0 0.0 0.00 3.41 F
1519 2626 1.295423 CCGGACCTAAGGTGTGTGG 59.705 63.158 0.0 0.0 35.25 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1649 2761 0.188587 ACCACCACCAGAGAGAGACA 59.811 55.0 0.0 0.0 0.0 3.41 R
2945 4334 0.032267 GACTCCGGCTCGATTTAGGG 59.968 60.0 0.0 0.0 0.0 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 4.142315 GCCTTGATGTGCATCATGTTACTT 60.142 41.667 14.65 0.00 46.12 2.24
91 93 0.177141 GCCAGCTACCACGTTATCCA 59.823 55.000 0.00 0.00 0.00 3.41
277 1217 1.987855 CCCTCCAACTAGGTCGGCA 60.988 63.158 0.00 0.00 39.02 5.69
348 1288 1.886222 GCTCTGGTTATGGTTGTGGCA 60.886 52.381 0.00 0.00 0.00 4.92
352 1295 4.667573 TCTGGTTATGGTTGTGGCATTTA 58.332 39.130 0.00 0.00 0.00 1.40
359 1302 7.174080 GGTTATGGTTGTGGCATTTATTTTTGT 59.826 33.333 0.00 0.00 0.00 2.83
566 1541 9.483062 TTTAAATGCGAAATGTTTTCAAGTTTG 57.517 25.926 0.00 0.00 0.00 2.93
707 1717 5.687285 AGTGAACATTTTCAGAATTTGCGAC 59.313 36.000 0.00 0.00 42.60 5.19
857 1875 3.123674 AAGCCTTACACGAGCTTCG 57.876 52.632 0.00 0.00 43.12 3.79
922 1940 3.175710 ACCGCTCCAAACCCTGGT 61.176 61.111 0.00 0.00 46.51 4.00
990 2019 3.779850 ATCATCTGCCGGCGCCATT 62.780 57.895 28.98 1.32 0.00 3.16
1451 2558 1.831736 CATGTCCTCCTCGTAAACCCT 59.168 52.381 0.00 0.00 0.00 4.34
1495 2602 2.819115 TCAGATTTCTGCGAGCATCTC 58.181 47.619 0.00 0.00 43.46 2.75
1515 2622 1.980772 CGGACCGGACCTAAGGTGT 60.981 63.158 20.77 0.00 41.51 4.16
1519 2626 1.295423 CCGGACCTAAGGTGTGTGG 59.705 63.158 0.00 0.00 35.25 4.17
1529 2636 5.163131 ACCTAAGGTGTGTGGAAAGTTACAT 60.163 40.000 0.00 0.00 32.98 2.29
1532 2639 4.787551 AGGTGTGTGGAAAGTTACATGAA 58.212 39.130 0.00 0.00 0.00 2.57
1535 2642 5.505654 GGTGTGTGGAAAGTTACATGAAGTG 60.506 44.000 0.00 0.00 0.00 3.16
1595 2704 5.295540 CGATCATCTGACTGAGAACTCTGTA 59.704 44.000 12.80 1.15 40.98 2.74
1634 2743 1.739371 GCCGAGGCGTTCTTCATTACT 60.739 52.381 0.00 0.00 0.00 2.24
1649 2761 4.631234 TCATTACTGAGTTCCATAGGGGT 58.369 43.478 0.00 0.00 38.11 4.95
1769 2881 1.447838 CGGCGGTGTCTTGTATGCT 60.448 57.895 0.00 0.00 0.00 3.79
1781 2893 5.188555 TGTCTTGTATGCTCTGGAATTCTCT 59.811 40.000 5.23 0.00 0.00 3.10
1871 2983 0.039180 TTCTCGAGCAGTACTCCCCA 59.961 55.000 7.81 0.00 43.01 4.96
1921 3033 0.884514 CACCTGCTCGAGTCAGAAGA 59.115 55.000 27.61 2.33 33.54 2.87
1943 3055 2.810400 CGAGGTCATGTTTGTTGGTCCT 60.810 50.000 0.00 0.00 0.00 3.85
1961 3073 2.354510 TCCTGTGTTCGCAACAAAAGAG 59.645 45.455 3.74 0.13 44.16 2.85
1983 3095 0.178981 CGGATGCCCCAAATCCATCT 60.179 55.000 3.54 0.00 43.33 2.90
2013 3125 1.279271 AGGTGTACAGGCTGGATGTTC 59.721 52.381 20.34 0.00 32.02 3.18
2091 3203 3.335373 GATCAATCATCGTTCGCGC 57.665 52.632 0.00 0.00 41.05 6.86
2111 3223 1.676635 GCATGCTTCAGAGGTGCCA 60.677 57.895 11.37 0.00 0.00 4.92
2141 3253 4.893608 TGAGCAACTGCATCTACTTTGTA 58.106 39.130 4.22 0.00 45.16 2.41
2158 3270 3.297830 TGTAGGTGATGTTGACGAGTG 57.702 47.619 0.00 0.00 0.00 3.51
2191 3306 0.327480 TGGGGCATCTACTCCATGGT 60.327 55.000 12.58 0.00 0.00 3.55
2214 3329 0.884704 GCGGAAGGTGCTGTTTCAGA 60.885 55.000 0.66 0.00 32.44 3.27
2219 3334 1.073897 GGTGCTGTTTCAGAGCCCT 59.926 57.895 0.66 0.00 35.43 5.19
2222 3337 0.183492 TGCTGTTTCAGAGCCCTGTT 59.817 50.000 0.00 0.00 41.16 3.16
2428 3556 4.881019 TTATGCTGATAGAAGGAGAGGC 57.119 45.455 0.00 0.00 0.00 4.70
2432 3591 1.372375 GATAGAAGGAGAGGCGCGC 60.372 63.158 25.94 25.94 0.00 6.86
2451 3788 2.155732 CGCGGTATTGCTATGATGTGAC 59.844 50.000 0.00 0.00 0.00 3.67
2459 3796 5.420725 TTGCTATGATGTGACAGTAAGGT 57.579 39.130 0.00 0.00 0.00 3.50
2460 3797 5.011090 TGCTATGATGTGACAGTAAGGTC 57.989 43.478 0.00 0.00 38.29 3.85
2461 3798 4.711846 TGCTATGATGTGACAGTAAGGTCT 59.288 41.667 0.00 0.00 38.61 3.85
2462 3799 5.891551 TGCTATGATGTGACAGTAAGGTCTA 59.108 40.000 0.00 0.00 38.61 2.59
2463 3800 6.551227 TGCTATGATGTGACAGTAAGGTCTAT 59.449 38.462 0.00 0.00 38.61 1.98
2464 3801 7.724061 TGCTATGATGTGACAGTAAGGTCTATA 59.276 37.037 0.00 0.00 38.61 1.31
2465 3802 8.577296 GCTATGATGTGACAGTAAGGTCTATAA 58.423 37.037 0.00 0.00 38.61 0.98
2558 3904 4.219288 GGCATGGCTCAAATTATTCTAGGG 59.781 45.833 12.86 0.00 0.00 3.53
2561 3907 5.708736 TGGCTCAAATTATTCTAGGGTCA 57.291 39.130 0.00 0.00 0.00 4.02
2591 3943 1.137513 AACTGTACGAAGCGCTGTTC 58.862 50.000 12.58 4.47 0.00 3.18
2610 3962 5.757886 TGTTCGTGAAATTTCAGACAATCC 58.242 37.500 21.05 6.85 37.98 3.01
2613 3965 4.151689 TCGTGAAATTTCAGACAATCCGAC 59.848 41.667 21.05 4.78 37.98 4.79
2710 4079 8.561536 TTCTCAGATGTATTACTGGGGATTTA 57.438 34.615 0.00 0.00 35.57 1.40
2736 4105 3.554934 AGTTTGTGTGTGACATGGTGAT 58.445 40.909 0.00 0.00 33.40 3.06
2752 4125 3.124466 TGGTGATCGAAGTTTATGTTGCG 59.876 43.478 0.00 0.00 0.00 4.85
2852 4239 4.997395 TGAACTTGTAGATGGAGCTGTTTC 59.003 41.667 0.00 0.00 0.00 2.78
2889 4278 3.072184 CCATCCAATGTTGAACCCCAAAA 59.928 43.478 0.00 0.00 36.36 2.44
2892 4281 3.386402 TCCAATGTTGAACCCCAAAAGTC 59.614 43.478 0.00 0.00 36.36 3.01
2900 4289 1.364269 ACCCCAAAAGTCCGTGGATA 58.636 50.000 0.00 0.00 37.03 2.59
2916 4305 2.981859 GATACATCCGGTGTCCAGTT 57.018 50.000 12.11 0.00 42.29 3.16
2917 4306 3.261981 GATACATCCGGTGTCCAGTTT 57.738 47.619 12.11 0.00 42.29 2.66
2919 4308 1.604604 ACATCCGGTGTCCAGTTTTG 58.395 50.000 0.00 0.00 35.77 2.44
2920 4309 0.881118 CATCCGGTGTCCAGTTTTGG 59.119 55.000 0.00 0.00 46.49 3.28
2921 4310 0.251165 ATCCGGTGTCCAGTTTTGGG 60.251 55.000 0.00 0.00 45.10 4.12
2922 4311 1.149627 CCGGTGTCCAGTTTTGGGA 59.850 57.895 0.00 0.00 45.10 4.37
2923 4312 0.889186 CCGGTGTCCAGTTTTGGGAG 60.889 60.000 0.00 0.00 45.10 4.30
2924 4313 0.107831 CGGTGTCCAGTTTTGGGAGA 59.892 55.000 0.00 0.00 45.10 3.71
2925 4314 1.605753 GGTGTCCAGTTTTGGGAGAC 58.394 55.000 0.00 0.00 45.35 3.36
2926 4315 1.226746 GTGTCCAGTTTTGGGAGACG 58.773 55.000 0.00 0.00 45.10 4.18
2931 4320 0.040067 CAGTTTTGGGAGACGCTTGC 60.040 55.000 0.00 0.00 0.00 4.01
2932 4321 1.172812 AGTTTTGGGAGACGCTTGCC 61.173 55.000 0.00 0.00 0.00 4.52
2933 4322 2.258013 TTTTGGGAGACGCTTGCCG 61.258 57.895 0.00 0.00 44.21 5.69
2935 4324 2.668185 TTTGGGAGACGCTTGCCGAA 62.668 55.000 0.00 0.00 41.02 4.30
2937 4326 2.048127 GGAGACGCTTGCCGAAGT 60.048 61.111 0.00 0.00 41.02 3.01
2938 4327 2.095252 GGAGACGCTTGCCGAAGTC 61.095 63.158 0.00 0.00 41.02 3.01
2940 4329 2.357034 GACGCTTGCCGAAGTCCA 60.357 61.111 0.00 0.00 41.02 4.02
2941 4330 2.357517 ACGCTTGCCGAAGTCCAG 60.358 61.111 0.00 0.00 41.02 3.86
2942 4331 2.048222 CGCTTGCCGAAGTCCAGA 60.048 61.111 0.00 0.00 40.02 3.86
2944 4333 1.301716 GCTTGCCGAAGTCCAGACA 60.302 57.895 0.00 0.00 0.00 3.41
2945 4334 1.569479 GCTTGCCGAAGTCCAGACAC 61.569 60.000 0.00 0.00 0.00 3.67
2946 4335 0.951040 CTTGCCGAAGTCCAGACACC 60.951 60.000 0.00 0.00 0.00 4.16
2948 4337 2.584391 GCCGAAGTCCAGACACCCT 61.584 63.158 0.00 0.00 0.00 4.34
2949 4338 1.255667 GCCGAAGTCCAGACACCCTA 61.256 60.000 0.00 0.00 0.00 3.53
2951 4340 1.621814 CCGAAGTCCAGACACCCTAAA 59.378 52.381 0.00 0.00 0.00 1.85
2952 4341 2.236395 CCGAAGTCCAGACACCCTAAAT 59.764 50.000 0.00 0.00 0.00 1.40
2953 4342 3.522553 CGAAGTCCAGACACCCTAAATC 58.477 50.000 0.00 0.00 0.00 2.17
2954 4343 3.522553 GAAGTCCAGACACCCTAAATCG 58.477 50.000 0.00 0.00 0.00 3.34
2956 4345 2.761208 AGTCCAGACACCCTAAATCGAG 59.239 50.000 0.00 0.00 0.00 4.04
2957 4346 1.480954 TCCAGACACCCTAAATCGAGC 59.519 52.381 0.00 0.00 0.00 5.03
2958 4347 1.473434 CCAGACACCCTAAATCGAGCC 60.473 57.143 0.00 0.00 0.00 4.70
2959 4348 0.460311 AGACACCCTAAATCGAGCCG 59.540 55.000 0.00 0.00 0.00 5.52
2962 4351 0.249489 CACCCTAAATCGAGCCGGAG 60.249 60.000 5.05 0.00 0.00 4.63
2963 4352 0.686769 ACCCTAAATCGAGCCGGAGT 60.687 55.000 5.05 0.00 0.00 3.85
2964 4353 0.032267 CCCTAAATCGAGCCGGAGTC 59.968 60.000 5.05 0.00 0.00 3.36
2966 4355 1.536284 CCTAAATCGAGCCGGAGTCAC 60.536 57.143 5.05 0.00 0.00 3.67
2969 4358 0.965866 AATCGAGCCGGAGTCACAGA 60.966 55.000 5.05 0.00 0.00 3.41
2972 4361 1.009389 CGAGCCGGAGTCACAGAAAC 61.009 60.000 5.05 0.00 0.00 2.78
2973 4362 0.670854 GAGCCGGAGTCACAGAAACC 60.671 60.000 5.05 0.00 0.00 3.27
2974 4363 1.671379 GCCGGAGTCACAGAAACCC 60.671 63.158 5.05 0.00 0.00 4.11
2975 4364 2.058675 CCGGAGTCACAGAAACCCT 58.941 57.895 0.00 0.00 0.00 4.34
2976 4365 1.263356 CCGGAGTCACAGAAACCCTA 58.737 55.000 0.00 0.00 0.00 3.53
2977 4366 1.621814 CCGGAGTCACAGAAACCCTAA 59.378 52.381 0.00 0.00 0.00 2.69
2979 4368 3.307480 CCGGAGTCACAGAAACCCTAAAT 60.307 47.826 0.00 0.00 0.00 1.40
2980 4369 3.933332 CGGAGTCACAGAAACCCTAAATC 59.067 47.826 0.00 0.00 0.00 2.17
2981 4370 4.262617 GGAGTCACAGAAACCCTAAATCC 58.737 47.826 0.00 0.00 0.00 3.01
2982 4371 4.262617 GAGTCACAGAAACCCTAAATCCC 58.737 47.826 0.00 0.00 0.00 3.85
2984 4373 2.990284 TCACAGAAACCCTAAATCCCCA 59.010 45.455 0.00 0.00 0.00 4.96
2985 4374 3.399644 TCACAGAAACCCTAAATCCCCAA 59.600 43.478 0.00 0.00 0.00 4.12
2986 4375 4.140900 TCACAGAAACCCTAAATCCCCAAA 60.141 41.667 0.00 0.00 0.00 3.28
2987 4376 4.777366 CACAGAAACCCTAAATCCCCAAAT 59.223 41.667 0.00 0.00 0.00 2.32
2988 4377 5.023452 ACAGAAACCCTAAATCCCCAAATC 58.977 41.667 0.00 0.00 0.00 2.17
2991 4380 1.578703 ACCCTAAATCCCCAAATCCCC 59.421 52.381 0.00 0.00 0.00 4.81
2992 4381 1.578215 CCCTAAATCCCCAAATCCCCA 59.422 52.381 0.00 0.00 0.00 4.96
2994 4383 3.569903 CCCTAAATCCCCAAATCCCCAAA 60.570 47.826 0.00 0.00 0.00 3.28
2996 4385 4.347876 CCTAAATCCCCAAATCCCCAAATC 59.652 45.833 0.00 0.00 0.00 2.17
2997 4386 2.086610 ATCCCCAAATCCCCAAATCG 57.913 50.000 0.00 0.00 0.00 3.34
2998 4387 1.003646 TCCCCAAATCCCCAAATCGA 58.996 50.000 0.00 0.00 0.00 3.59
2999 4388 1.359474 TCCCCAAATCCCCAAATCGAA 59.641 47.619 0.00 0.00 0.00 3.71
3002 4391 2.093711 CCCAAATCCCCAAATCGAAACC 60.094 50.000 0.00 0.00 0.00 3.27
3004 4393 4.020543 CCAAATCCCCAAATCGAAACCTA 58.979 43.478 0.00 0.00 0.00 3.08
3005 4394 4.464597 CCAAATCCCCAAATCGAAACCTAA 59.535 41.667 0.00 0.00 0.00 2.69
3007 4396 4.586306 ATCCCCAAATCGAAACCTAACT 57.414 40.909 0.00 0.00 0.00 2.24
3008 4397 3.946606 TCCCCAAATCGAAACCTAACTC 58.053 45.455 0.00 0.00 0.00 3.01
3009 4398 2.676342 CCCCAAATCGAAACCTAACTCG 59.324 50.000 0.00 0.00 36.39 4.18
3012 4401 4.092968 CCCAAATCGAAACCTAACTCGAAG 59.907 45.833 0.00 0.00 46.26 3.79
3013 4402 4.689345 CCAAATCGAAACCTAACTCGAAGT 59.311 41.667 0.00 0.00 46.26 3.01
3014 4403 5.865552 CCAAATCGAAACCTAACTCGAAGTA 59.134 40.000 0.00 0.00 46.26 2.24
3015 4404 6.183360 CCAAATCGAAACCTAACTCGAAGTAC 60.183 42.308 0.00 0.00 46.26 2.73
3016 4405 5.893897 ATCGAAACCTAACTCGAAGTACT 57.106 39.130 0.00 0.00 46.26 2.73
3017 4406 5.039480 TCGAAACCTAACTCGAAGTACTG 57.961 43.478 0.00 0.00 40.89 2.74
3018 4407 4.756642 TCGAAACCTAACTCGAAGTACTGA 59.243 41.667 0.00 0.00 40.89 3.41
3020 4409 4.780275 AACCTAACTCGAAGTACTGACC 57.220 45.455 0.00 0.00 0.00 4.02
3021 4410 3.087781 ACCTAACTCGAAGTACTGACCC 58.912 50.000 0.00 0.00 0.00 4.46
3023 4412 4.018960 ACCTAACTCGAAGTACTGACCCTA 60.019 45.833 0.00 0.00 0.00 3.53
3024 4413 4.946157 CCTAACTCGAAGTACTGACCCTAA 59.054 45.833 0.00 0.00 0.00 2.69
3025 4414 4.780275 AACTCGAAGTACTGACCCTAAC 57.220 45.455 0.00 0.00 0.00 2.34
3026 4415 3.759581 ACTCGAAGTACTGACCCTAACA 58.240 45.455 0.00 0.00 0.00 2.41
3027 4416 3.757493 ACTCGAAGTACTGACCCTAACAG 59.243 47.826 0.00 0.00 40.68 3.16
3029 4418 3.504906 TCGAAGTACTGACCCTAACAGTG 59.495 47.826 10.24 0.00 46.15 3.66
3031 4420 1.900486 AGTACTGACCCTAACAGTGGC 59.100 52.381 10.24 4.29 46.15 5.01
3032 4421 1.621814 GTACTGACCCTAACAGTGGCA 59.378 52.381 10.24 0.00 46.15 4.92
3033 4422 1.362224 ACTGACCCTAACAGTGGCAT 58.638 50.000 0.00 0.00 45.19 4.40
3034 4423 1.279271 ACTGACCCTAACAGTGGCATC 59.721 52.381 0.00 0.00 45.19 3.91
3035 4424 0.249120 TGACCCTAACAGTGGCATCG 59.751 55.000 0.00 0.00 0.00 3.84
3036 4425 1.078426 ACCCTAACAGTGGCATCGC 60.078 57.895 0.00 0.00 0.00 4.58
3038 4427 0.676466 CCCTAACAGTGGCATCGCAA 60.676 55.000 0.00 0.00 0.00 4.85
3039 4428 0.729116 CCTAACAGTGGCATCGCAAG 59.271 55.000 0.00 0.00 0.00 4.01
3053 4442 2.972625 TCGCAAGAGGAAATGTACTGG 58.027 47.619 0.00 0.00 45.01 4.00
3055 4444 2.436417 GCAAGAGGAAATGTACTGGCA 58.564 47.619 0.00 0.00 30.61 4.92
3056 4445 2.421424 GCAAGAGGAAATGTACTGGCAG 59.579 50.000 14.16 14.16 30.61 4.85
3057 4446 3.012518 CAAGAGGAAATGTACTGGCAGG 58.987 50.000 20.34 0.58 0.00 4.85
3059 4448 0.392998 AGGAAATGTACTGGCAGGCG 60.393 55.000 20.34 0.00 0.00 5.52
3060 4449 1.376609 GGAAATGTACTGGCAGGCGG 61.377 60.000 20.34 0.00 0.00 6.13
3061 4450 0.392461 GAAATGTACTGGCAGGCGGA 60.392 55.000 20.34 0.00 0.00 5.54
3070 5174 2.032681 GCAGGCGGAGTCCTTGTT 59.967 61.111 7.77 0.00 32.02 2.83
3071 5175 2.328099 GCAGGCGGAGTCCTTGTTG 61.328 63.158 7.77 1.79 32.02 3.33
3074 5178 0.182775 AGGCGGAGTCCTTGTTGTTT 59.817 50.000 7.77 0.00 30.22 2.83
3080 5184 2.032924 GGAGTCCTTGTTGTTTTCACCG 59.967 50.000 0.41 0.00 0.00 4.94
3083 5187 1.666700 TCCTTGTTGTTTTCACCGTCG 59.333 47.619 0.00 0.00 0.00 5.12
3085 5189 2.159490 CCTTGTTGTTTTCACCGTCGTT 60.159 45.455 0.00 0.00 0.00 3.85
3086 5190 2.810028 TGTTGTTTTCACCGTCGTTC 57.190 45.000 0.00 0.00 0.00 3.95
3088 5192 1.397692 GTTGTTTTCACCGTCGTTCCA 59.602 47.619 0.00 0.00 0.00 3.53
3089 5193 1.956297 TGTTTTCACCGTCGTTCCAT 58.044 45.000 0.00 0.00 0.00 3.41
3090 5194 1.600013 TGTTTTCACCGTCGTTCCATG 59.400 47.619 0.00 0.00 0.00 3.66
3091 5195 1.868498 GTTTTCACCGTCGTTCCATGA 59.132 47.619 0.00 0.00 0.00 3.07
3092 5196 1.504359 TTTCACCGTCGTTCCATGAC 58.496 50.000 0.00 0.00 0.00 3.06
3093 5197 0.389757 TTCACCGTCGTTCCATGACA 59.610 50.000 0.00 0.00 33.83 3.58
3094 5198 0.319211 TCACCGTCGTTCCATGACAC 60.319 55.000 0.00 0.00 33.83 3.67
3095 5199 1.005394 ACCGTCGTTCCATGACACC 60.005 57.895 0.00 0.00 33.83 4.16
3096 5200 1.005512 CCGTCGTTCCATGACACCA 60.006 57.895 0.00 0.00 33.83 4.17
3097 5201 0.391130 CCGTCGTTCCATGACACCAT 60.391 55.000 0.00 0.00 33.83 3.55
3126 5230 4.385405 GCGAGCAGCTGGGTCAGT 62.385 66.667 17.12 0.00 44.30 3.41
3127 5231 2.433838 CGAGCAGCTGGGTCAGTG 60.434 66.667 17.12 0.00 44.30 3.66
3128 5232 2.935740 CGAGCAGCTGGGTCAGTGA 61.936 63.158 17.12 0.00 44.30 3.41
3129 5233 1.375268 GAGCAGCTGGGTCAGTGAC 60.375 63.158 17.12 15.24 43.54 3.67
3131 5235 2.047844 CAGCTGGGTCAGTGACGG 60.048 66.667 16.89 10.48 33.43 4.79
3134 5238 3.680786 CTGGGTCAGTGACGGCGA 61.681 66.667 16.62 0.96 32.65 5.54
3135 5239 3.916392 CTGGGTCAGTGACGGCGAC 62.916 68.421 16.62 8.59 32.65 5.19
3148 5252 3.553597 GGCGACGATACCAGAGAAG 57.446 57.895 0.00 0.00 0.00 2.85
3149 5253 1.022735 GGCGACGATACCAGAGAAGA 58.977 55.000 0.00 0.00 0.00 2.87
3150 5254 1.002251 GGCGACGATACCAGAGAAGAG 60.002 57.143 0.00 0.00 0.00 2.85
3151 5255 1.941294 GCGACGATACCAGAGAAGAGA 59.059 52.381 0.00 0.00 0.00 3.10
3152 5256 2.032377 GCGACGATACCAGAGAAGAGAG 60.032 54.545 0.00 0.00 0.00 3.20
3153 5257 2.032377 CGACGATACCAGAGAAGAGAGC 60.032 54.545 0.00 0.00 0.00 4.09
3154 5258 2.946329 GACGATACCAGAGAAGAGAGCA 59.054 50.000 0.00 0.00 0.00 4.26
3155 5259 3.561143 ACGATACCAGAGAAGAGAGCAT 58.439 45.455 0.00 0.00 0.00 3.79
3156 5260 3.317711 ACGATACCAGAGAAGAGAGCATG 59.682 47.826 0.00 0.00 0.00 4.06
3158 5262 4.619973 GATACCAGAGAAGAGAGCATGTG 58.380 47.826 0.00 0.00 0.00 3.21
3159 5263 1.066286 ACCAGAGAAGAGAGCATGTGC 60.066 52.381 0.00 0.00 42.49 4.57
3170 5274 2.584418 CATGTGCGCGAGGGAGAG 60.584 66.667 12.10 0.00 0.00 3.20
3171 5275 2.755876 ATGTGCGCGAGGGAGAGA 60.756 61.111 12.10 0.00 0.00 3.10
3173 5277 4.200283 GTGCGCGAGGGAGAGAGG 62.200 72.222 12.10 0.00 0.00 3.69
3176 5280 2.440430 CGCGAGGGAGAGAGGGAA 60.440 66.667 0.00 0.00 0.00 3.97
3177 5281 2.052690 CGCGAGGGAGAGAGGGAAA 61.053 63.158 0.00 0.00 0.00 3.13
3178 5282 1.819905 GCGAGGGAGAGAGGGAAAG 59.180 63.158 0.00 0.00 0.00 2.62
3179 5283 1.681486 GCGAGGGAGAGAGGGAAAGG 61.681 65.000 0.00 0.00 0.00 3.11
3182 5286 1.694525 GGGAGAGAGGGAAAGGGGG 60.695 68.421 0.00 0.00 0.00 5.40
3183 5287 1.396594 GGAGAGAGGGAAAGGGGGA 59.603 63.158 0.00 0.00 0.00 4.81
3184 5288 0.692756 GGAGAGAGGGAAAGGGGGAG 60.693 65.000 0.00 0.00 0.00 4.30
3185 5289 0.692756 GAGAGAGGGAAAGGGGGAGG 60.693 65.000 0.00 0.00 0.00 4.30
3186 5290 1.694525 GAGAGGGAAAGGGGGAGGG 60.695 68.421 0.00 0.00 0.00 4.30
3187 5291 2.696504 GAGGGAAAGGGGGAGGGG 60.697 72.222 0.00 0.00 0.00 4.79
3188 5292 4.387765 AGGGAAAGGGGGAGGGGG 62.388 72.222 0.00 0.00 0.00 5.40
3189 5293 4.381121 GGGAAAGGGGGAGGGGGA 62.381 72.222 0.00 0.00 0.00 4.81
3190 5294 2.696504 GGAAAGGGGGAGGGGGAG 60.697 72.222 0.00 0.00 0.00 4.30
3191 5295 2.459710 GAAAGGGGGAGGGGGAGA 59.540 66.667 0.00 0.00 0.00 3.71
3192 5296 1.694525 GAAAGGGGGAGGGGGAGAG 60.695 68.421 0.00 0.00 0.00 3.20
3193 5297 3.289454 AAAGGGGGAGGGGGAGAGG 62.289 68.421 0.00 0.00 0.00 3.69
3196 5300 4.179599 GGGGAGGGGGAGAGGGAG 62.180 77.778 0.00 0.00 0.00 4.30
3198 5302 4.179599 GGAGGGGGAGAGGGAGGG 62.180 77.778 0.00 0.00 0.00 4.30
3199 5303 3.036959 GAGGGGGAGAGGGAGGGA 61.037 72.222 0.00 0.00 0.00 4.20
3200 5304 3.039526 AGGGGGAGAGGGAGGGAG 61.040 72.222 0.00 0.00 0.00 4.30
3202 5306 4.179599 GGGGAGAGGGAGGGAGGG 62.180 77.778 0.00 0.00 0.00 4.30
3204 5308 2.612251 GGAGAGGGAGGGAGGGAG 59.388 72.222 0.00 0.00 0.00 4.30
3206 5310 4.150454 AGAGGGAGGGAGGGAGCG 62.150 72.222 0.00 0.00 0.00 5.03
3207 5311 4.467107 GAGGGAGGGAGGGAGCGT 62.467 72.222 0.00 0.00 0.00 5.07
3208 5312 4.787280 AGGGAGGGAGGGAGCGTG 62.787 72.222 0.00 0.00 0.00 5.34
3211 5315 3.462678 GAGGGAGGGAGCGTGTCC 61.463 72.222 0.00 0.00 46.10 4.02
3218 5322 3.241177 GGAGCGTGTCCGTTTGAC 58.759 61.111 0.00 0.00 44.72 3.18
3221 5325 2.659244 GCGTGTCCGTTTGACCGA 60.659 61.111 7.18 0.00 43.78 4.69
3224 5328 1.227321 GTGTCCGTTTGACCGACCA 60.227 57.895 0.00 0.00 43.78 4.02
3226 5330 2.372040 TGTCCGTTTGACCGACCAGG 62.372 60.000 0.00 0.00 43.78 4.45
3252 5356 2.712057 GGGACGTTTTGACTAGACGA 57.288 50.000 6.95 0.00 39.85 4.20
3254 5358 1.974680 GGACGTTTTGACTAGACGACG 59.025 52.381 6.95 9.99 39.85 5.12
3255 5359 1.381429 GACGTTTTGACTAGACGACGC 59.619 52.381 6.95 2.61 39.85 5.19
3256 5360 0.706729 CGTTTTGACTAGACGACGCC 59.293 55.000 0.00 0.00 38.99 5.68
3257 5361 1.774639 GTTTTGACTAGACGACGCCA 58.225 50.000 0.00 0.00 0.00 5.69
3258 5362 2.129607 GTTTTGACTAGACGACGCCAA 58.870 47.619 0.00 0.00 0.00 4.52
3259 5363 2.512485 TTTGACTAGACGACGCCAAA 57.488 45.000 0.00 0.00 0.00 3.28
3260 5364 1.774639 TTGACTAGACGACGCCAAAC 58.225 50.000 0.00 0.00 0.00 2.93
3261 5365 0.956633 TGACTAGACGACGCCAAACT 59.043 50.000 0.00 0.00 0.00 2.66
3262 5366 1.335597 TGACTAGACGACGCCAAACTG 60.336 52.381 0.00 0.00 0.00 3.16
3264 5368 1.060713 CTAGACGACGCCAAACTGTG 58.939 55.000 0.00 0.00 0.00 3.66
3265 5369 0.942410 TAGACGACGCCAAACTGTGC 60.942 55.000 0.00 0.00 0.00 4.57
3266 5370 3.236618 GACGACGCCAAACTGTGCC 62.237 63.158 0.00 0.00 0.00 5.01
3268 5372 3.276846 GACGCCAAACTGTGCCGT 61.277 61.111 0.00 0.00 0.00 5.68
3269 5373 2.826738 ACGCCAAACTGTGCCGTT 60.827 55.556 0.00 0.00 0.00 4.44
3270 5374 2.051345 CGCCAAACTGTGCCGTTC 60.051 61.111 0.00 0.00 0.00 3.95
3271 5375 2.051345 GCCAAACTGTGCCGTTCG 60.051 61.111 0.00 0.00 0.00 3.95
3272 5376 2.051345 CCAAACTGTGCCGTTCGC 60.051 61.111 0.00 0.00 38.31 4.70
3273 5377 2.051345 CAAACTGTGCCGTTCGCC 60.051 61.111 0.00 0.00 36.24 5.54
3274 5378 2.515057 AAACTGTGCCGTTCGCCA 60.515 55.556 0.00 0.00 36.24 5.69
3275 5379 2.542907 AAACTGTGCCGTTCGCCAG 61.543 57.895 0.00 0.00 39.98 4.85
3276 5380 4.988598 ACTGTGCCGTTCGCCAGG 62.989 66.667 0.00 0.00 39.03 4.45
3282 5386 4.745751 CCGTTCGCCAGGCCGTTA 62.746 66.667 5.63 0.00 0.00 3.18
3283 5387 3.186047 CGTTCGCCAGGCCGTTAG 61.186 66.667 5.63 0.00 0.00 2.34
3284 5388 2.818274 GTTCGCCAGGCCGTTAGG 60.818 66.667 5.63 0.00 41.62 2.69
3305 5409 0.585838 CACGTTTGCATTTTTGGGCC 59.414 50.000 0.00 0.00 0.00 5.80
3306 5410 0.533978 ACGTTTGCATTTTTGGGCCC 60.534 50.000 17.59 17.59 0.00 5.80
3307 5411 1.233950 CGTTTGCATTTTTGGGCCCC 61.234 55.000 22.27 1.27 0.00 5.80
3309 5413 0.179006 TTTGCATTTTTGGGCCCCAC 60.179 50.000 22.27 0.67 30.78 4.61
3310 5414 2.061790 TTGCATTTTTGGGCCCCACC 62.062 55.000 22.27 0.70 30.78 4.61
3312 5416 1.678724 CATTTTTGGGCCCCACCTG 59.321 57.895 22.27 6.70 39.10 4.00
3313 5417 1.126948 CATTTTTGGGCCCCACCTGT 61.127 55.000 22.27 0.00 39.10 4.00
3314 5418 0.835971 ATTTTTGGGCCCCACCTGTC 60.836 55.000 22.27 0.00 39.10 3.51
3315 5419 3.801068 TTTTGGGCCCCACCTGTCG 62.801 63.158 22.27 0.00 39.10 4.35
3319 5423 3.961414 GGCCCCACCTGTCGGAAA 61.961 66.667 0.00 0.00 34.51 3.13
3320 5424 2.114411 GCCCCACCTGTCGGAAAA 59.886 61.111 0.00 0.00 0.00 2.29
3321 5425 1.971695 GCCCCACCTGTCGGAAAAG 60.972 63.158 0.00 0.00 0.00 2.27
3322 5426 1.454539 CCCCACCTGTCGGAAAAGT 59.545 57.895 0.00 0.00 0.00 2.66
3323 5427 0.889186 CCCCACCTGTCGGAAAAGTG 60.889 60.000 0.00 0.00 0.00 3.16
3324 5428 1.515521 CCCACCTGTCGGAAAAGTGC 61.516 60.000 0.00 0.00 0.00 4.40
3327 5431 0.468226 ACCTGTCGGAAAAGTGCTCA 59.532 50.000 0.00 0.00 0.00 4.26
3329 5433 1.946768 CCTGTCGGAAAAGTGCTCAAA 59.053 47.619 0.00 0.00 0.00 2.69
3330 5434 2.031682 CCTGTCGGAAAAGTGCTCAAAG 60.032 50.000 0.00 0.00 0.00 2.77
3331 5435 1.946768 TGTCGGAAAAGTGCTCAAAGG 59.053 47.619 0.00 0.00 0.00 3.11
3332 5436 0.951558 TCGGAAAAGTGCTCAAAGGC 59.048 50.000 0.00 0.00 0.00 4.35
3334 5438 0.039165 GGAAAAGTGCTCAAAGGCCG 60.039 55.000 0.00 0.00 0.00 6.13
3337 5441 1.391157 AAAGTGCTCAAAGGCCGCAA 61.391 50.000 3.66 0.00 35.16 4.85
3339 5443 1.372128 GTGCTCAAAGGCCGCAAAG 60.372 57.895 3.66 0.00 35.16 2.77
3340 5444 2.431430 GCTCAAAGGCCGCAAAGC 60.431 61.111 0.00 1.84 0.00 3.51
3341 5445 3.041701 CTCAAAGGCCGCAAAGCA 58.958 55.556 0.00 0.00 0.00 3.91
3343 5447 0.665369 CTCAAAGGCCGCAAAGCAAG 60.665 55.000 0.00 0.00 0.00 4.01
3344 5448 1.067916 CAAAGGCCGCAAAGCAAGT 59.932 52.632 0.00 0.00 0.00 3.16
3346 5450 1.391157 AAAGGCCGCAAAGCAAGTGA 61.391 50.000 0.00 0.00 0.00 3.41
3347 5451 1.181098 AAGGCCGCAAAGCAAGTGAT 61.181 50.000 0.00 0.00 0.00 3.06
3348 5452 1.153958 GGCCGCAAAGCAAGTGATC 60.154 57.895 0.00 0.00 0.00 2.92
3349 5453 1.580942 GCCGCAAAGCAAGTGATCA 59.419 52.632 0.00 0.00 0.00 2.92
3350 5454 0.455633 GCCGCAAAGCAAGTGATCAG 60.456 55.000 0.00 0.00 0.00 2.90
3351 5455 0.877071 CCGCAAAGCAAGTGATCAGT 59.123 50.000 0.00 0.00 0.00 3.41
3352 5456 1.267806 CCGCAAAGCAAGTGATCAGTT 59.732 47.619 10.10 10.10 0.00 3.16
3353 5457 2.578495 CGCAAAGCAAGTGATCAGTTC 58.422 47.619 13.00 8.38 0.00 3.01
3355 5459 3.304257 CGCAAAGCAAGTGATCAGTTCTT 60.304 43.478 13.00 14.94 0.00 2.52
3356 5460 4.225208 GCAAAGCAAGTGATCAGTTCTTC 58.775 43.478 13.00 5.83 0.00 2.87
3357 5461 4.023365 GCAAAGCAAGTGATCAGTTCTTCT 60.023 41.667 13.00 7.88 0.00 2.85
3358 5462 5.506982 GCAAAGCAAGTGATCAGTTCTTCTT 60.507 40.000 13.00 12.77 0.00 2.52
3359 5463 5.686159 AAGCAAGTGATCAGTTCTTCTTG 57.314 39.130 13.00 13.67 38.62 3.02
3360 5464 3.819537 GCAAGTGATCAGTTCTTCTTGC 58.180 45.455 22.80 22.80 45.48 4.01
3362 5466 5.428496 CAAGTGATCAGTTCTTCTTGCAA 57.572 39.130 13.00 0.00 33.72 4.08
3363 5467 5.824429 CAAGTGATCAGTTCTTCTTGCAAA 58.176 37.500 13.00 0.00 33.72 3.68
3364 5468 6.267817 CAAGTGATCAGTTCTTCTTGCAAAA 58.732 36.000 13.00 0.00 33.72 2.44
3387 5863 3.396560 AGTTTACCAGAAACGTAGTGGC 58.603 45.455 9.98 0.00 45.00 5.01
3388 5864 3.070590 AGTTTACCAGAAACGTAGTGGCT 59.929 43.478 9.98 2.32 45.00 4.75
3389 5865 3.756933 TTACCAGAAACGTAGTGGCTT 57.243 42.857 9.98 0.00 45.00 4.35
3390 5866 2.165319 ACCAGAAACGTAGTGGCTTC 57.835 50.000 9.98 0.00 45.00 3.86
3391 5867 1.692519 ACCAGAAACGTAGTGGCTTCT 59.307 47.619 9.98 1.84 45.00 2.85
3396 5872 1.961793 AACGTAGTGGCTTCTGCAAA 58.038 45.000 0.00 0.00 45.00 3.68
3398 5874 2.294074 ACGTAGTGGCTTCTGCAAAAA 58.706 42.857 0.00 0.00 42.51 1.94
3399 5875 2.884639 ACGTAGTGGCTTCTGCAAAAAT 59.115 40.909 0.00 0.00 42.51 1.82
3400 5876 4.069304 ACGTAGTGGCTTCTGCAAAAATA 58.931 39.130 0.00 0.00 42.51 1.40
3401 5877 4.700213 ACGTAGTGGCTTCTGCAAAAATAT 59.300 37.500 0.00 0.00 42.51 1.28
3402 5878 5.878116 ACGTAGTGGCTTCTGCAAAAATATA 59.122 36.000 0.00 0.00 42.51 0.86
3403 5879 6.373216 ACGTAGTGGCTTCTGCAAAAATATAA 59.627 34.615 0.00 0.00 42.51 0.98
3405 5881 7.915397 CGTAGTGGCTTCTGCAAAAATATAAAT 59.085 33.333 0.00 0.00 41.91 1.40
3406 5882 9.586435 GTAGTGGCTTCTGCAAAAATATAAATT 57.414 29.630 0.00 0.00 41.91 1.82
3408 5884 9.807649 AGTGGCTTCTGCAAAAATATAAATTAG 57.192 29.630 0.00 0.00 41.91 1.73
3440 5916 2.500509 TTTTTGCAAACCTAGCCGTG 57.499 45.000 12.39 0.00 0.00 4.94
3443 5919 0.397187 TTGCAAACCTAGCCGTGGTA 59.603 50.000 0.00 0.00 36.69 3.25
3447 5923 2.490509 GCAAACCTAGCCGTGGTAATTT 59.509 45.455 0.00 0.00 36.69 1.82
3449 5925 4.729595 CAAACCTAGCCGTGGTAATTTTC 58.270 43.478 0.00 0.00 36.69 2.29
3451 5927 3.606687 ACCTAGCCGTGGTAATTTTCTG 58.393 45.455 0.00 0.00 35.80 3.02
3452 5928 2.354821 CCTAGCCGTGGTAATTTTCTGC 59.645 50.000 0.00 0.00 0.00 4.26
3453 5929 2.200373 AGCCGTGGTAATTTTCTGCT 57.800 45.000 0.00 0.00 0.00 4.24
3455 5931 2.890945 AGCCGTGGTAATTTTCTGCTTT 59.109 40.909 0.00 0.00 0.00 3.51
3458 5934 5.010213 AGCCGTGGTAATTTTCTGCTTTTAA 59.990 36.000 0.00 0.00 0.00 1.52
3461 5937 6.581166 CCGTGGTAATTTTCTGCTTTTAACTC 59.419 38.462 0.00 0.00 0.00 3.01
3462 5938 7.136119 CGTGGTAATTTTCTGCTTTTAACTCA 58.864 34.615 0.00 0.00 0.00 3.41
3463 5939 7.646130 CGTGGTAATTTTCTGCTTTTAACTCAA 59.354 33.333 0.00 0.00 0.00 3.02
3465 5941 9.308318 TGGTAATTTTCTGCTTTTAACTCAAAC 57.692 29.630 0.00 0.00 0.00 2.93
3466 5942 9.308318 GGTAATTTTCTGCTTTTAACTCAAACA 57.692 29.630 0.00 0.00 0.00 2.83
3484 8332 3.417069 ACATTTGGATGTTGAGACGGA 57.583 42.857 0.00 0.00 43.92 4.69
3485 8333 3.074412 ACATTTGGATGTTGAGACGGAC 58.926 45.455 0.00 0.00 43.92 4.79
3486 8334 2.920724 TTTGGATGTTGAGACGGACA 57.079 45.000 0.00 0.00 0.00 4.02
3487 8335 2.920724 TTGGATGTTGAGACGGACAA 57.079 45.000 0.00 0.00 0.00 3.18
3489 8337 2.766313 TGGATGTTGAGACGGACAAAG 58.234 47.619 0.00 0.00 0.00 2.77
3491 8339 1.464997 GATGTTGAGACGGACAAAGGC 59.535 52.381 0.00 0.00 0.00 4.35
3492 8340 0.179234 TGTTGAGACGGACAAAGGCA 59.821 50.000 0.00 0.00 0.00 4.75
3493 8341 0.868406 GTTGAGACGGACAAAGGCAG 59.132 55.000 0.00 0.00 0.00 4.85
3494 8342 0.756294 TTGAGACGGACAAAGGCAGA 59.244 50.000 0.00 0.00 0.00 4.26
3495 8343 0.033504 TGAGACGGACAAAGGCAGAC 59.966 55.000 0.00 0.00 0.00 3.51
3496 8344 0.318762 GAGACGGACAAAGGCAGACT 59.681 55.000 0.00 0.00 0.00 3.24
3497 8345 0.318762 AGACGGACAAAGGCAGACTC 59.681 55.000 0.00 0.00 0.00 3.36
3499 8347 1.738099 CGGACAAAGGCAGACTCGG 60.738 63.158 0.00 0.00 0.00 4.63
3500 8348 1.671742 GGACAAAGGCAGACTCGGA 59.328 57.895 0.00 0.00 0.00 4.55
3501 8349 0.034896 GGACAAAGGCAGACTCGGAA 59.965 55.000 0.00 0.00 0.00 4.30
3502 8350 1.339151 GGACAAAGGCAGACTCGGAAT 60.339 52.381 0.00 0.00 0.00 3.01
3503 8351 2.427506 GACAAAGGCAGACTCGGAATT 58.572 47.619 0.00 0.00 0.00 2.17
3504 8352 2.154462 ACAAAGGCAGACTCGGAATTG 58.846 47.619 0.00 0.00 0.00 2.32
3505 8353 1.135575 CAAAGGCAGACTCGGAATTGC 60.136 52.381 0.00 0.00 35.87 3.56
3506 8354 0.326264 AAGGCAGACTCGGAATTGCT 59.674 50.000 0.00 0.00 36.79 3.91
3507 8355 1.195115 AGGCAGACTCGGAATTGCTA 58.805 50.000 0.00 0.00 36.79 3.49
3509 8357 2.965831 AGGCAGACTCGGAATTGCTATA 59.034 45.455 0.00 0.00 36.79 1.31
3510 8358 3.388024 AGGCAGACTCGGAATTGCTATAA 59.612 43.478 0.00 0.00 36.79 0.98
3511 8359 4.040952 AGGCAGACTCGGAATTGCTATAAT 59.959 41.667 0.00 0.00 36.79 1.28
3513 8361 6.070538 AGGCAGACTCGGAATTGCTATAATAT 60.071 38.462 0.00 0.00 36.79 1.28
3514 8362 6.036517 GGCAGACTCGGAATTGCTATAATATG 59.963 42.308 0.00 0.00 36.79 1.78
3515 8363 6.036517 GCAGACTCGGAATTGCTATAATATGG 59.963 42.308 0.00 0.00 33.88 2.74
3516 8364 6.036517 CAGACTCGGAATTGCTATAATATGGC 59.963 42.308 1.38 1.38 37.27 4.40
3517 8365 5.186198 ACTCGGAATTGCTATAATATGGCC 58.814 41.667 6.15 0.00 35.70 5.36
3520 8368 4.576463 CGGAATTGCTATAATATGGCCTCC 59.424 45.833 3.32 8.32 35.70 4.30
3521 8369 5.509498 GGAATTGCTATAATATGGCCTCCA 58.491 41.667 3.32 0.00 38.19 3.86
3524 8438 7.124750 GGAATTGCTATAATATGGCCTCCAAAT 59.875 37.037 3.32 0.00 36.95 2.32
3526 8440 7.854166 TTGCTATAATATGGCCTCCAAATTT 57.146 32.000 3.32 0.00 36.95 1.82
3534 8448 3.631250 TGGCCTCCAAATTTCATCTACC 58.369 45.455 3.32 0.00 0.00 3.18
3536 8450 4.476846 TGGCCTCCAAATTTCATCTACCTA 59.523 41.667 3.32 0.00 0.00 3.08
3542 8456 5.729229 TCCAAATTTCATCTACCTAGTGGGA 59.271 40.000 0.00 0.00 38.76 4.37
3543 8457 5.823045 CCAAATTTCATCTACCTAGTGGGAC 59.177 44.000 0.00 0.00 38.76 4.46
3544 8458 6.353082 CCAAATTTCATCTACCTAGTGGGACT 60.353 42.308 0.00 0.00 38.76 3.85
3545 8459 6.487299 AATTTCATCTACCTAGTGGGACTC 57.513 41.667 0.00 0.00 38.76 3.36
3546 8460 4.883021 TTCATCTACCTAGTGGGACTCT 57.117 45.455 0.00 0.00 38.76 3.24
3547 8461 5.988865 TTCATCTACCTAGTGGGACTCTA 57.011 43.478 0.00 0.00 38.76 2.43
3549 8463 6.129414 TCATCTACCTAGTGGGACTCTATC 57.871 45.833 0.00 0.00 38.76 2.08
3550 8464 4.620589 TCTACCTAGTGGGACTCTATCG 57.379 50.000 0.00 0.00 38.76 2.92
3551 8465 3.972638 TCTACCTAGTGGGACTCTATCGT 59.027 47.826 0.00 0.00 38.76 3.73
3552 8466 3.666345 ACCTAGTGGGACTCTATCGTT 57.334 47.619 0.00 0.00 38.76 3.85
3553 8467 4.785346 ACCTAGTGGGACTCTATCGTTA 57.215 45.455 0.00 0.00 38.76 3.18
3554 8468 4.716794 ACCTAGTGGGACTCTATCGTTAG 58.283 47.826 0.00 0.00 38.76 2.34
3556 8470 4.515944 CCTAGTGGGACTCTATCGTTAGTG 59.484 50.000 0.63 1.32 33.76 2.74
3557 8471 3.288964 AGTGGGACTCTATCGTTAGTGG 58.711 50.000 7.33 2.55 0.00 4.00
3558 8472 2.361438 GTGGGACTCTATCGTTAGTGGG 59.639 54.545 7.33 0.61 0.00 4.61
3559 8473 2.242965 TGGGACTCTATCGTTAGTGGGA 59.757 50.000 7.33 0.00 0.00 4.37
3560 8474 3.117246 TGGGACTCTATCGTTAGTGGGAT 60.117 47.826 7.33 0.00 0.00 3.85
3561 8475 4.105217 TGGGACTCTATCGTTAGTGGGATA 59.895 45.833 7.33 0.00 0.00 2.59
3562 8476 5.222275 TGGGACTCTATCGTTAGTGGGATAT 60.222 44.000 7.33 0.00 0.00 1.63
3564 8478 5.357596 GGACTCTATCGTTAGTGGGATATCC 59.642 48.000 13.87 13.87 0.00 2.59
3567 8481 7.011382 ACTCTATCGTTAGTGGGATATCCTTT 58.989 38.462 21.18 9.60 36.20 3.11
3576 8490 2.707554 GGGATATCCTTTCCCCACTCT 58.292 52.381 21.18 0.00 46.20 3.24
3577 8491 2.640332 GGGATATCCTTTCCCCACTCTC 59.360 54.545 21.18 0.00 46.20 3.20
3579 8493 2.191981 TATCCTTTCCCCACTCTCCC 57.808 55.000 0.00 0.00 0.00 4.30
3580 8494 0.423544 ATCCTTTCCCCACTCTCCCT 59.576 55.000 0.00 0.00 0.00 4.20
3581 8495 0.196118 TCCTTTCCCCACTCTCCCTT 59.804 55.000 0.00 0.00 0.00 3.95
3582 8496 0.621082 CCTTTCCCCACTCTCCCTTC 59.379 60.000 0.00 0.00 0.00 3.46
3584 8498 0.104144 TTTCCCCACTCTCCCTTCCA 60.104 55.000 0.00 0.00 0.00 3.53
3585 8499 0.121197 TTCCCCACTCTCCCTTCCAT 59.879 55.000 0.00 0.00 0.00 3.41
3586 8500 0.326618 TCCCCACTCTCCCTTCCATC 60.327 60.000 0.00 0.00 0.00 3.51
3587 8501 1.348775 CCCCACTCTCCCTTCCATCC 61.349 65.000 0.00 0.00 0.00 3.51
3588 8502 0.327000 CCCACTCTCCCTTCCATCCT 60.327 60.000 0.00 0.00 0.00 3.24
3589 8503 1.127343 CCACTCTCCCTTCCATCCTC 58.873 60.000 0.00 0.00 0.00 3.71
3590 8504 1.623557 CCACTCTCCCTTCCATCCTCA 60.624 57.143 0.00 0.00 0.00 3.86
3591 8505 1.484240 CACTCTCCCTTCCATCCTCAC 59.516 57.143 0.00 0.00 0.00 3.51
3592 8506 1.127343 CTCTCCCTTCCATCCTCACC 58.873 60.000 0.00 0.00 0.00 4.02
3594 8508 0.978146 CTCCCTTCCATCCTCACCGT 60.978 60.000 0.00 0.00 0.00 4.83
3596 8510 1.264749 CCCTTCCATCCTCACCGTGA 61.265 60.000 0.29 0.29 0.00 4.35
3597 8511 0.176680 CCTTCCATCCTCACCGTGAG 59.823 60.000 19.97 19.97 43.91 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 2.565834 GGTTAGTGGGAGTAACTGAGCA 59.434 50.000 0.00 0.00 35.05 4.26
91 93 0.971386 CTTGCCCAAAGTTGAGGCAT 59.029 50.000 20.04 0.00 46.43 4.40
277 1217 3.764434 CCGGGTCACTATATGCTAGATGT 59.236 47.826 0.00 0.00 0.00 3.06
548 1523 7.951706 AAATTGCAAACTTGAAAACATTTCG 57.048 28.000 1.71 0.00 0.00 3.46
627 1602 7.937294 CGTAAATTCGAAAACAAGTTTGTATGC 59.063 33.333 0.00 0.00 41.31 3.14
630 1605 8.892887 AACGTAAATTCGAAAACAAGTTTGTA 57.107 26.923 0.00 0.00 36.09 2.41
922 1940 3.449018 CGAGAGAAGAGAAAGGGGATCAA 59.551 47.826 0.00 0.00 0.00 2.57
973 2002 4.488136 AATGGCGCCGGCAGATGA 62.488 61.111 28.98 5.04 42.43 2.92
990 2019 2.648613 AATGTTGGGGGTGCGTTGGA 62.649 55.000 0.00 0.00 0.00 3.53
994 2023 2.282887 GGAATGTTGGGGGTGCGT 60.283 61.111 0.00 0.00 0.00 5.24
995 2024 2.035626 AGGAATGTTGGGGGTGCG 59.964 61.111 0.00 0.00 0.00 5.34
996 2025 0.681243 GAGAGGAATGTTGGGGGTGC 60.681 60.000 0.00 0.00 0.00 5.01
997 2026 0.034089 GGAGAGGAATGTTGGGGGTG 60.034 60.000 0.00 0.00 0.00 4.61
998 2027 0.178831 AGGAGAGGAATGTTGGGGGT 60.179 55.000 0.00 0.00 0.00 4.95
999 2028 0.548510 GAGGAGAGGAATGTTGGGGG 59.451 60.000 0.00 0.00 0.00 5.40
1149 2190 2.026879 GACGCAGCGGAGGATCTC 59.973 66.667 21.15 1.14 33.73 2.75
1164 2205 2.956964 CGAATCGAGCGGGCTGAC 60.957 66.667 0.00 0.00 0.00 3.51
1467 2574 0.729690 GCAGAAATCTGAACGCTCCC 59.270 55.000 14.43 0.00 46.59 4.30
1495 2602 1.379576 ACCTTAGGTCCGGTCCGAG 60.380 63.158 14.39 13.40 0.00 4.63
1502 2609 0.682852 TTCCACACACCTTAGGTCCG 59.317 55.000 0.00 0.00 31.02 4.79
1515 2622 5.042463 TCCACTTCATGTAACTTTCCACA 57.958 39.130 0.00 0.00 0.00 4.17
1519 2626 9.696917 AAAATCAATCCACTTCATGTAACTTTC 57.303 29.630 0.00 0.00 0.00 2.62
1554 2661 2.363788 TCGACAGGATGCAAGTGTAC 57.636 50.000 0.00 0.00 42.53 2.90
1595 2704 2.742372 CCGGTGCAAAGCTAGCGT 60.742 61.111 9.55 2.32 36.18 5.07
1634 2743 2.044492 AGAGACACCCCTATGGAACTCA 59.956 50.000 0.00 0.00 38.00 3.41
1649 2761 0.188587 ACCACCACCAGAGAGAGACA 59.811 55.000 0.00 0.00 0.00 3.41
1769 2881 3.138283 ACACCAAACCAGAGAATTCCAGA 59.862 43.478 0.65 0.00 0.00 3.86
1921 3033 2.218603 GACCAACAAACATGACCTCGT 58.781 47.619 0.00 0.00 0.00 4.18
1943 3055 1.202245 GGCTCTTTTGTTGCGAACACA 60.202 47.619 1.85 0.00 41.97 3.72
1961 3073 3.226537 GATTTGGGGCATCCGGGC 61.227 66.667 0.00 0.00 38.76 6.13
1983 3095 0.317160 CTGTACACCTCGAAGCCACA 59.683 55.000 0.00 0.00 0.00 4.17
2091 3203 1.654954 GGCACCTCTGAAGCATGCAG 61.655 60.000 21.98 8.96 45.89 4.41
2141 3253 0.681733 AGCACTCGTCAACATCACCT 59.318 50.000 0.00 0.00 0.00 4.00
2191 3306 2.337879 AAACAGCACCTTCCGCTCCA 62.338 55.000 0.00 0.00 37.72 3.86
2230 3345 1.302993 GCTTTGTACTTCCCCGGCA 60.303 57.895 0.00 0.00 0.00 5.69
2428 3556 0.093535 CATCATAGCAATACCGCGCG 59.906 55.000 25.67 25.67 36.85 6.86
2432 3591 4.371786 ACTGTCACATCATAGCAATACCG 58.628 43.478 0.00 0.00 0.00 4.02
2459 3796 4.892198 AGTAGCCCTTGGAGGTTTATAGA 58.108 43.478 0.00 0.00 31.93 1.98
2460 3797 6.702329 CATAGTAGCCCTTGGAGGTTTATAG 58.298 44.000 0.00 0.00 31.93 1.31
2461 3798 5.012768 GCATAGTAGCCCTTGGAGGTTTATA 59.987 44.000 0.00 0.00 31.93 0.98
2462 3799 4.202472 GCATAGTAGCCCTTGGAGGTTTAT 60.202 45.833 0.00 0.00 31.93 1.40
2463 3800 3.135895 GCATAGTAGCCCTTGGAGGTTTA 59.864 47.826 0.00 0.00 31.93 2.01
2464 3801 2.092375 GCATAGTAGCCCTTGGAGGTTT 60.092 50.000 0.00 0.00 31.93 3.27
2465 3802 1.490910 GCATAGTAGCCCTTGGAGGTT 59.509 52.381 0.00 0.00 31.93 3.50
2466 3803 1.132500 GCATAGTAGCCCTTGGAGGT 58.868 55.000 0.00 0.00 31.93 3.85
2500 3846 1.134280 CCTTCAGGTATGCCACAGAGG 60.134 57.143 1.54 0.00 41.84 3.69
2558 3904 5.700846 TCGTACAGTTTCTGAGAATCTGAC 58.299 41.667 29.85 22.53 43.01 3.51
2561 3907 5.164954 GCTTCGTACAGTTTCTGAGAATCT 58.835 41.667 0.00 0.00 35.18 2.40
2591 3943 4.394795 GTCGGATTGTCTGAAATTTCACG 58.605 43.478 16.91 15.88 32.84 4.35
2610 3962 6.106877 ACAATCAATCCATAAACTTCGTCG 57.893 37.500 0.00 0.00 0.00 5.12
2613 3965 8.450964 ACAAGTACAATCAATCCATAAACTTCG 58.549 33.333 0.00 0.00 0.00 3.79
2641 3994 2.411547 GCGAGTTCATGCACAACTGTAC 60.412 50.000 15.90 2.57 34.10 2.90
2673 4033 3.395941 ACATCTGAGAAACCCAAAGGAGT 59.604 43.478 0.00 0.00 36.73 3.85
2710 4079 3.882888 CCATGTCACACACAAACTAAGGT 59.117 43.478 0.00 0.00 38.97 3.50
2736 4105 2.396601 ACGACGCAACATAAACTTCGA 58.603 42.857 0.00 0.00 0.00 3.71
2752 4125 5.640357 AGAGGTATTCTATCTCATCGACGAC 59.360 44.000 0.00 0.00 38.41 4.34
2852 4239 1.379843 ATGGCCCCCTTTGTAAGCG 60.380 57.895 0.00 0.00 0.00 4.68
2907 4296 1.226746 CGTCTCCCAAAACTGGACAC 58.773 55.000 0.00 0.00 0.00 3.67
2910 4299 0.472471 AAGCGTCTCCCAAAACTGGA 59.528 50.000 0.00 0.00 0.00 3.86
2911 4300 0.593128 CAAGCGTCTCCCAAAACTGG 59.407 55.000 0.00 0.00 0.00 4.00
2912 4301 0.040067 GCAAGCGTCTCCCAAAACTG 60.040 55.000 0.00 0.00 0.00 3.16
2913 4302 1.172812 GGCAAGCGTCTCCCAAAACT 61.173 55.000 0.00 0.00 0.00 2.66
2916 4305 2.668185 TTCGGCAAGCGTCTCCCAAA 62.668 55.000 0.00 0.00 0.00 3.28
2917 4306 3.171828 TTCGGCAAGCGTCTCCCAA 62.172 57.895 0.00 0.00 0.00 4.12
2919 4308 2.815647 CTTCGGCAAGCGTCTCCC 60.816 66.667 0.00 0.00 0.00 4.30
2920 4309 2.048127 ACTTCGGCAAGCGTCTCC 60.048 61.111 0.00 0.00 32.09 3.71
2921 4310 2.095252 GGACTTCGGCAAGCGTCTC 61.095 63.158 0.00 0.00 32.09 3.36
2922 4311 2.048127 GGACTTCGGCAAGCGTCT 60.048 61.111 0.00 0.00 32.09 4.18
2923 4312 2.357034 TGGACTTCGGCAAGCGTC 60.357 61.111 0.00 0.00 32.09 5.19
2924 4313 2.357517 CTGGACTTCGGCAAGCGT 60.358 61.111 0.00 0.00 32.09 5.07
2925 4314 2.048222 TCTGGACTTCGGCAAGCG 60.048 61.111 0.00 0.00 32.09 4.68
2926 4315 1.301716 TGTCTGGACTTCGGCAAGC 60.302 57.895 2.38 0.00 32.09 4.01
2931 4320 1.263356 TTAGGGTGTCTGGACTTCGG 58.737 55.000 2.38 0.00 0.00 4.30
2932 4321 3.522553 GATTTAGGGTGTCTGGACTTCG 58.477 50.000 2.38 0.00 0.00 3.79
2933 4322 3.194968 TCGATTTAGGGTGTCTGGACTTC 59.805 47.826 2.38 0.00 0.00 3.01
2935 4324 2.761208 CTCGATTTAGGGTGTCTGGACT 59.239 50.000 2.38 0.00 0.00 3.85
2937 4326 1.480954 GCTCGATTTAGGGTGTCTGGA 59.519 52.381 0.00 0.00 0.00 3.86
2938 4327 1.473434 GGCTCGATTTAGGGTGTCTGG 60.473 57.143 0.00 0.00 0.00 3.86
2940 4329 0.460311 CGGCTCGATTTAGGGTGTCT 59.540 55.000 0.00 0.00 0.00 3.41
2941 4330 0.529992 CCGGCTCGATTTAGGGTGTC 60.530 60.000 0.00 0.00 0.00 3.67
2942 4331 0.974010 TCCGGCTCGATTTAGGGTGT 60.974 55.000 0.00 0.00 0.00 4.16
2944 4333 0.686769 ACTCCGGCTCGATTTAGGGT 60.687 55.000 0.00 0.00 0.00 4.34
2945 4334 0.032267 GACTCCGGCTCGATTTAGGG 59.968 60.000 0.00 0.00 0.00 3.53
2946 4335 0.744874 TGACTCCGGCTCGATTTAGG 59.255 55.000 0.00 0.00 0.00 2.69
2948 4337 1.134367 CTGTGACTCCGGCTCGATTTA 59.866 52.381 0.00 0.00 0.00 1.40
2949 4338 0.108615 CTGTGACTCCGGCTCGATTT 60.109 55.000 0.00 0.00 0.00 2.17
2951 4340 0.965866 TTCTGTGACTCCGGCTCGAT 60.966 55.000 0.00 0.00 0.00 3.59
2952 4341 1.176619 TTTCTGTGACTCCGGCTCGA 61.177 55.000 0.00 0.00 0.00 4.04
2953 4342 1.009389 GTTTCTGTGACTCCGGCTCG 61.009 60.000 0.00 0.00 0.00 5.03
2954 4343 0.670854 GGTTTCTGTGACTCCGGCTC 60.671 60.000 0.00 0.00 0.00 4.70
2956 4345 1.671379 GGGTTTCTGTGACTCCGGC 60.671 63.158 0.00 0.00 0.00 6.13
2957 4346 1.263356 TAGGGTTTCTGTGACTCCGG 58.737 55.000 0.00 0.00 0.00 5.14
2958 4347 3.396260 TTTAGGGTTTCTGTGACTCCG 57.604 47.619 0.00 0.00 0.00 4.63
2959 4348 4.262617 GGATTTAGGGTTTCTGTGACTCC 58.737 47.826 0.00 0.00 0.00 3.85
2962 4351 3.245122 TGGGGATTTAGGGTTTCTGTGAC 60.245 47.826 0.00 0.00 0.00 3.67
2963 4352 2.990284 TGGGGATTTAGGGTTTCTGTGA 59.010 45.455 0.00 0.00 0.00 3.58
2964 4353 3.449746 TGGGGATTTAGGGTTTCTGTG 57.550 47.619 0.00 0.00 0.00 3.66
2966 4355 4.405680 GGATTTGGGGATTTAGGGTTTCTG 59.594 45.833 0.00 0.00 0.00 3.02
2969 4358 3.570128 GGGGATTTGGGGATTTAGGGTTT 60.570 47.826 0.00 0.00 0.00 3.27
2972 4361 1.578215 TGGGGATTTGGGGATTTAGGG 59.422 52.381 0.00 0.00 0.00 3.53
2973 4362 3.413105 TTGGGGATTTGGGGATTTAGG 57.587 47.619 0.00 0.00 0.00 2.69
2974 4363 4.039124 CGATTTGGGGATTTGGGGATTTAG 59.961 45.833 0.00 0.00 0.00 1.85
2975 4364 3.964031 CGATTTGGGGATTTGGGGATTTA 59.036 43.478 0.00 0.00 0.00 1.40
2976 4365 2.771372 CGATTTGGGGATTTGGGGATTT 59.229 45.455 0.00 0.00 0.00 2.17
2977 4366 2.023501 TCGATTTGGGGATTTGGGGATT 60.024 45.455 0.00 0.00 0.00 3.01
2979 4368 1.003646 TCGATTTGGGGATTTGGGGA 58.996 50.000 0.00 0.00 0.00 4.81
2980 4369 1.859302 TTCGATTTGGGGATTTGGGG 58.141 50.000 0.00 0.00 0.00 4.96
2981 4370 2.093711 GGTTTCGATTTGGGGATTTGGG 60.094 50.000 0.00 0.00 0.00 4.12
2982 4371 2.831526 AGGTTTCGATTTGGGGATTTGG 59.168 45.455 0.00 0.00 0.00 3.28
2984 4373 5.330233 AGTTAGGTTTCGATTTGGGGATTT 58.670 37.500 0.00 0.00 0.00 2.17
2985 4374 4.930696 AGTTAGGTTTCGATTTGGGGATT 58.069 39.130 0.00 0.00 0.00 3.01
2986 4375 4.524053 GAGTTAGGTTTCGATTTGGGGAT 58.476 43.478 0.00 0.00 0.00 3.85
2987 4376 3.618019 CGAGTTAGGTTTCGATTTGGGGA 60.618 47.826 0.00 0.00 39.06 4.81
2988 4377 2.676342 CGAGTTAGGTTTCGATTTGGGG 59.324 50.000 0.00 0.00 39.06 4.96
2991 4380 5.840940 ACTTCGAGTTAGGTTTCGATTTG 57.159 39.130 0.00 0.00 44.32 2.32
2992 4381 6.585322 CAGTACTTCGAGTTAGGTTTCGATTT 59.415 38.462 0.00 0.00 44.32 2.17
2994 4383 5.413833 TCAGTACTTCGAGTTAGGTTTCGAT 59.586 40.000 0.00 0.00 44.32 3.59
2996 4385 4.850470 GTCAGTACTTCGAGTTAGGTTTCG 59.150 45.833 0.00 0.00 38.13 3.46
2997 4386 5.159925 GGTCAGTACTTCGAGTTAGGTTTC 58.840 45.833 0.00 0.00 0.00 2.78
2998 4387 4.021632 GGGTCAGTACTTCGAGTTAGGTTT 60.022 45.833 0.00 0.00 0.00 3.27
2999 4388 3.509184 GGGTCAGTACTTCGAGTTAGGTT 59.491 47.826 0.00 0.00 0.00 3.50
3002 4391 5.413833 TGTTAGGGTCAGTACTTCGAGTTAG 59.586 44.000 0.00 0.00 0.00 2.34
3004 4393 4.147321 TGTTAGGGTCAGTACTTCGAGTT 58.853 43.478 0.00 0.00 0.00 3.01
3005 4394 3.757493 CTGTTAGGGTCAGTACTTCGAGT 59.243 47.826 0.00 0.00 0.00 4.18
3007 4396 3.504906 CACTGTTAGGGTCAGTACTTCGA 59.495 47.826 0.00 0.00 43.14 3.71
3008 4397 3.367087 CCACTGTTAGGGTCAGTACTTCG 60.367 52.174 0.00 0.00 43.14 3.79
3009 4398 3.616802 GCCACTGTTAGGGTCAGTACTTC 60.617 52.174 0.00 0.00 43.14 3.01
3010 4399 2.302157 GCCACTGTTAGGGTCAGTACTT 59.698 50.000 0.00 0.00 43.14 2.24
3012 4401 1.621814 TGCCACTGTTAGGGTCAGTAC 59.378 52.381 0.00 0.00 43.14 2.73
3013 4402 2.018355 TGCCACTGTTAGGGTCAGTA 57.982 50.000 0.00 0.00 43.14 2.74
3014 4403 1.279271 GATGCCACTGTTAGGGTCAGT 59.721 52.381 0.00 0.00 45.43 3.41
3015 4404 1.740380 CGATGCCACTGTTAGGGTCAG 60.740 57.143 0.00 0.00 38.68 3.51
3016 4405 0.249120 CGATGCCACTGTTAGGGTCA 59.751 55.000 0.00 0.00 0.00 4.02
3017 4406 1.090052 GCGATGCCACTGTTAGGGTC 61.090 60.000 0.00 0.00 0.00 4.46
3018 4407 1.078426 GCGATGCCACTGTTAGGGT 60.078 57.895 0.00 0.00 0.00 4.34
3020 4409 0.729116 CTTGCGATGCCACTGTTAGG 59.271 55.000 0.00 0.00 0.00 2.69
3021 4410 1.662629 CTCTTGCGATGCCACTGTTAG 59.337 52.381 0.00 0.00 0.00 2.34
3023 4412 0.957395 CCTCTTGCGATGCCACTGTT 60.957 55.000 0.00 0.00 0.00 3.16
3024 4413 1.376424 CCTCTTGCGATGCCACTGT 60.376 57.895 0.00 0.00 0.00 3.55
3025 4414 0.674581 TTCCTCTTGCGATGCCACTG 60.675 55.000 0.00 0.00 0.00 3.66
3026 4415 0.036732 TTTCCTCTTGCGATGCCACT 59.963 50.000 0.00 0.00 0.00 4.00
3027 4416 1.098050 ATTTCCTCTTGCGATGCCAC 58.902 50.000 0.00 0.00 0.00 5.01
3028 4417 1.097232 CATTTCCTCTTGCGATGCCA 58.903 50.000 0.00 0.00 0.00 4.92
3029 4418 1.098050 ACATTTCCTCTTGCGATGCC 58.902 50.000 0.00 0.00 0.00 4.40
3031 4420 3.310774 CCAGTACATTTCCTCTTGCGATG 59.689 47.826 0.00 0.00 0.00 3.84
3032 4421 3.535561 CCAGTACATTTCCTCTTGCGAT 58.464 45.455 0.00 0.00 0.00 4.58
3033 4422 2.935238 GCCAGTACATTTCCTCTTGCGA 60.935 50.000 0.00 0.00 0.00 5.10
3034 4423 1.398390 GCCAGTACATTTCCTCTTGCG 59.602 52.381 0.00 0.00 0.00 4.85
3035 4424 2.421424 CTGCCAGTACATTTCCTCTTGC 59.579 50.000 0.00 0.00 0.00 4.01
3036 4425 3.012518 CCTGCCAGTACATTTCCTCTTG 58.987 50.000 0.00 0.00 0.00 3.02
3038 4427 1.065126 GCCTGCCAGTACATTTCCTCT 60.065 52.381 0.00 0.00 0.00 3.69
3039 4428 1.383523 GCCTGCCAGTACATTTCCTC 58.616 55.000 0.00 0.00 0.00 3.71
3040 4429 0.392998 CGCCTGCCAGTACATTTCCT 60.393 55.000 0.00 0.00 0.00 3.36
3042 4431 0.392461 TCCGCCTGCCAGTACATTTC 60.392 55.000 0.00 0.00 0.00 2.17
3043 4432 0.392998 CTCCGCCTGCCAGTACATTT 60.393 55.000 0.00 0.00 0.00 2.32
3044 4433 1.221840 CTCCGCCTGCCAGTACATT 59.778 57.895 0.00 0.00 0.00 2.71
3047 4436 2.184579 GACTCCGCCTGCCAGTAC 59.815 66.667 0.00 0.00 0.00 2.73
3048 4437 3.075005 GGACTCCGCCTGCCAGTA 61.075 66.667 0.00 0.00 0.00 2.74
3050 4439 3.710722 AAGGACTCCGCCTGCCAG 61.711 66.667 0.00 0.00 38.58 4.85
3051 4440 4.020617 CAAGGACTCCGCCTGCCA 62.021 66.667 0.00 0.00 38.58 4.92
3052 4441 3.553095 AACAAGGACTCCGCCTGCC 62.553 63.158 0.00 0.00 38.58 4.85
3053 4442 2.032681 AACAAGGACTCCGCCTGC 59.967 61.111 0.00 0.00 38.58 4.85
3055 4444 0.182775 AAACAACAAGGACTCCGCCT 59.817 50.000 0.00 0.00 40.93 5.52
3056 4445 1.001706 GAAAACAACAAGGACTCCGCC 60.002 52.381 0.00 0.00 0.00 6.13
3057 4446 1.673920 TGAAAACAACAAGGACTCCGC 59.326 47.619 0.00 0.00 0.00 5.54
3059 4448 2.032924 CGGTGAAAACAACAAGGACTCC 59.967 50.000 0.00 0.00 0.00 3.85
3060 4449 2.681344 ACGGTGAAAACAACAAGGACTC 59.319 45.455 0.00 0.00 0.00 3.36
3061 4450 2.681344 GACGGTGAAAACAACAAGGACT 59.319 45.455 0.00 0.00 0.00 3.85
3070 5174 1.600013 CATGGAACGACGGTGAAAACA 59.400 47.619 0.00 0.00 0.00 2.83
3071 5175 1.868498 TCATGGAACGACGGTGAAAAC 59.132 47.619 0.00 0.00 0.00 2.43
3074 5178 0.389757 TGTCATGGAACGACGGTGAA 59.610 50.000 0.00 0.00 36.11 3.18
3088 5192 2.045045 CGGCCACCATGGTGTCAT 60.045 61.111 36.62 4.95 44.02 3.06
3089 5193 4.343323 CCGGCCACCATGGTGTCA 62.343 66.667 36.62 0.00 44.02 3.58
3110 5214 2.433838 CACTGACCCAGCTGCTCG 60.434 66.667 8.66 0.00 34.37 5.03
3111 5215 1.375268 GTCACTGACCCAGCTGCTC 60.375 63.158 8.66 5.40 34.37 4.26
3112 5216 2.746359 GTCACTGACCCAGCTGCT 59.254 61.111 8.66 0.00 34.37 4.24
3113 5217 2.740055 CGTCACTGACCCAGCTGC 60.740 66.667 8.66 0.00 34.37 5.25
3114 5218 2.047844 CCGTCACTGACCCAGCTG 60.048 66.667 6.78 6.78 34.37 4.24
3115 5219 4.008933 GCCGTCACTGACCCAGCT 62.009 66.667 3.50 0.00 34.37 4.24
3118 5222 3.986006 GTCGCCGTCACTGACCCA 61.986 66.667 3.50 0.00 0.00 4.51
3120 5224 1.985447 TATCGTCGCCGTCACTGACC 61.985 60.000 3.50 0.00 35.01 4.02
3121 5225 0.860618 GTATCGTCGCCGTCACTGAC 60.861 60.000 0.00 0.00 35.01 3.51
3122 5226 1.426621 GTATCGTCGCCGTCACTGA 59.573 57.895 0.00 0.00 35.01 3.41
3123 5227 1.585521 GGTATCGTCGCCGTCACTG 60.586 63.158 0.00 0.00 35.01 3.66
3124 5228 1.989966 CTGGTATCGTCGCCGTCACT 61.990 60.000 0.00 0.00 35.01 3.41
3125 5229 1.585521 CTGGTATCGTCGCCGTCAC 60.586 63.158 0.00 0.00 35.01 3.67
3126 5230 1.712018 CTCTGGTATCGTCGCCGTCA 61.712 60.000 0.00 0.00 35.01 4.35
3127 5231 1.009900 CTCTGGTATCGTCGCCGTC 60.010 63.158 0.00 0.00 35.01 4.79
3128 5232 1.028330 TTCTCTGGTATCGTCGCCGT 61.028 55.000 0.00 0.00 35.01 5.68
3129 5233 0.317103 CTTCTCTGGTATCGTCGCCG 60.317 60.000 0.00 0.00 0.00 6.46
3131 5235 1.941294 TCTCTTCTCTGGTATCGTCGC 59.059 52.381 0.00 0.00 0.00 5.19
3133 5237 2.946329 TGCTCTCTTCTCTGGTATCGTC 59.054 50.000 0.00 0.00 0.00 4.20
3134 5238 3.006112 TGCTCTCTTCTCTGGTATCGT 57.994 47.619 0.00 0.00 0.00 3.73
3135 5239 3.317711 ACATGCTCTCTTCTCTGGTATCG 59.682 47.826 0.00 0.00 0.00 2.92
3137 5241 3.181467 GCACATGCTCTCTTCTCTGGTAT 60.181 47.826 0.00 0.00 38.21 2.73
3138 5242 2.167281 GCACATGCTCTCTTCTCTGGTA 59.833 50.000 0.00 0.00 38.21 3.25
3139 5243 1.066286 GCACATGCTCTCTTCTCTGGT 60.066 52.381 0.00 0.00 38.21 4.00
3141 5245 1.279152 CGCACATGCTCTCTTCTCTG 58.721 55.000 1.82 0.00 39.32 3.35
3142 5246 0.459934 GCGCACATGCTCTCTTCTCT 60.460 55.000 0.30 0.00 39.32 3.10
3143 5247 1.750572 CGCGCACATGCTCTCTTCTC 61.751 60.000 8.75 0.00 39.32 2.87
3144 5248 1.808799 CGCGCACATGCTCTCTTCT 60.809 57.895 8.75 0.00 39.32 2.85
3145 5249 1.750572 CTCGCGCACATGCTCTCTTC 61.751 60.000 8.75 0.00 39.32 2.87
3146 5250 1.808799 CTCGCGCACATGCTCTCTT 60.809 57.895 8.75 0.00 39.32 2.85
3147 5251 2.202716 CTCGCGCACATGCTCTCT 60.203 61.111 8.75 0.00 39.32 3.10
3148 5252 3.260483 CCTCGCGCACATGCTCTC 61.260 66.667 8.75 0.00 39.32 3.20
3149 5253 4.827087 CCCTCGCGCACATGCTCT 62.827 66.667 8.75 0.00 39.32 4.09
3150 5254 4.819761 TCCCTCGCGCACATGCTC 62.820 66.667 8.75 0.00 39.32 4.26
3151 5255 4.827087 CTCCCTCGCGCACATGCT 62.827 66.667 8.75 0.00 39.32 3.79
3152 5256 4.819761 TCTCCCTCGCGCACATGC 62.820 66.667 8.75 0.00 37.78 4.06
3153 5257 2.584418 CTCTCCCTCGCGCACATG 60.584 66.667 8.75 0.00 0.00 3.21
3154 5258 2.755876 TCTCTCCCTCGCGCACAT 60.756 61.111 8.75 0.00 0.00 3.21
3155 5259 3.443925 CTCTCTCCCTCGCGCACA 61.444 66.667 8.75 0.00 0.00 4.57
3156 5260 4.200283 CCTCTCTCCCTCGCGCAC 62.200 72.222 8.75 0.00 0.00 5.34
3159 5263 2.010582 CTTTCCCTCTCTCCCTCGCG 62.011 65.000 0.00 0.00 0.00 5.87
3161 5265 1.045911 CCCTTTCCCTCTCTCCCTCG 61.046 65.000 0.00 0.00 0.00 4.63
3162 5266 0.692756 CCCCTTTCCCTCTCTCCCTC 60.693 65.000 0.00 0.00 0.00 4.30
3163 5267 1.398234 CCCCTTTCCCTCTCTCCCT 59.602 63.158 0.00 0.00 0.00 4.20
3165 5269 0.692756 CTCCCCCTTTCCCTCTCTCC 60.693 65.000 0.00 0.00 0.00 3.71
3166 5270 0.692756 CCTCCCCCTTTCCCTCTCTC 60.693 65.000 0.00 0.00 0.00 3.20
3167 5271 1.398234 CCTCCCCCTTTCCCTCTCT 59.602 63.158 0.00 0.00 0.00 3.10
3168 5272 1.694525 CCCTCCCCCTTTCCCTCTC 60.695 68.421 0.00 0.00 0.00 3.20
3170 5274 2.696504 CCCCTCCCCCTTTCCCTC 60.697 72.222 0.00 0.00 0.00 4.30
3171 5275 4.387765 CCCCCTCCCCCTTTCCCT 62.388 72.222 0.00 0.00 0.00 4.20
3173 5277 2.696504 CTCCCCCTCCCCCTTTCC 60.697 72.222 0.00 0.00 0.00 3.13
3174 5278 1.694525 CTCTCCCCCTCCCCCTTTC 60.695 68.421 0.00 0.00 0.00 2.62
3175 5279 2.461637 CTCTCCCCCTCCCCCTTT 59.538 66.667 0.00 0.00 0.00 3.11
3176 5280 3.711782 CCTCTCCCCCTCCCCCTT 61.712 72.222 0.00 0.00 0.00 3.95
3179 5283 4.179599 CTCCCTCTCCCCCTCCCC 62.180 77.778 0.00 0.00 0.00 4.81
3182 5286 3.036959 TCCCTCCCTCTCCCCCTC 61.037 72.222 0.00 0.00 0.00 4.30
3183 5287 3.039526 CTCCCTCCCTCTCCCCCT 61.040 72.222 0.00 0.00 0.00 4.79
3184 5288 4.179599 CCTCCCTCCCTCTCCCCC 62.180 77.778 0.00 0.00 0.00 5.40
3185 5289 4.179599 CCCTCCCTCCCTCTCCCC 62.180 77.778 0.00 0.00 0.00 4.81
3186 5290 3.036959 TCCCTCCCTCCCTCTCCC 61.037 72.222 0.00 0.00 0.00 4.30
3187 5291 2.612251 CTCCCTCCCTCCCTCTCC 59.388 72.222 0.00 0.00 0.00 3.71
3188 5292 2.123033 GCTCCCTCCCTCCCTCTC 60.123 72.222 0.00 0.00 0.00 3.20
3189 5293 4.150454 CGCTCCCTCCCTCCCTCT 62.150 72.222 0.00 0.00 0.00 3.69
3190 5294 4.467107 ACGCTCCCTCCCTCCCTC 62.467 72.222 0.00 0.00 0.00 4.30
3191 5295 4.787280 CACGCTCCCTCCCTCCCT 62.787 72.222 0.00 0.00 0.00 4.20
3193 5297 3.462678 GACACGCTCCCTCCCTCC 61.463 72.222 0.00 0.00 0.00 4.30
3198 5302 2.027625 CAAACGGACACGCTCCCTC 61.028 63.158 0.00 0.00 46.04 4.30
3199 5303 2.030562 CAAACGGACACGCTCCCT 59.969 61.111 0.00 0.00 46.04 4.20
3200 5304 2.029964 TCAAACGGACACGCTCCC 59.970 61.111 0.00 0.00 46.04 4.30
3208 5312 1.666872 CCTGGTCGGTCAAACGGAC 60.667 63.158 8.73 8.73 44.58 4.79
3209 5313 2.135581 ACCTGGTCGGTCAAACGGA 61.136 57.895 0.00 0.00 44.93 4.69
3224 5328 2.501602 AAAACGTCCCGGTCGACCT 61.502 57.895 30.92 9.59 0.00 3.85
3226 5330 1.300080 TCAAAACGTCCCGGTCGAC 60.300 57.895 20.16 7.13 0.00 4.20
3227 5331 1.300080 GTCAAAACGTCCCGGTCGA 60.300 57.895 20.16 0.00 0.00 4.20
3228 5332 0.039256 TAGTCAAAACGTCCCGGTCG 60.039 55.000 13.40 13.40 0.00 4.79
3230 5334 1.000171 GTCTAGTCAAAACGTCCCGGT 60.000 52.381 0.00 0.00 0.00 5.28
3231 5335 1.706443 GTCTAGTCAAAACGTCCCGG 58.294 55.000 0.00 0.00 0.00 5.73
3232 5336 1.069022 TCGTCTAGTCAAAACGTCCCG 60.069 52.381 0.00 0.00 37.64 5.14
3233 5337 2.323059 GTCGTCTAGTCAAAACGTCCC 58.677 52.381 0.00 0.00 37.64 4.46
3234 5338 1.974680 CGTCGTCTAGTCAAAACGTCC 59.025 52.381 0.00 0.00 37.64 4.79
3235 5339 1.381429 GCGTCGTCTAGTCAAAACGTC 59.619 52.381 0.00 0.00 37.64 4.34
3236 5340 1.402511 GCGTCGTCTAGTCAAAACGT 58.597 50.000 0.00 0.00 37.64 3.99
3237 5341 0.706729 GGCGTCGTCTAGTCAAAACG 59.293 55.000 0.00 0.00 37.74 3.60
3239 5343 2.512485 TTGGCGTCGTCTAGTCAAAA 57.488 45.000 0.00 0.00 0.00 2.44
3240 5344 2.129607 GTTTGGCGTCGTCTAGTCAAA 58.870 47.619 0.00 0.00 0.00 2.69
3241 5345 1.338973 AGTTTGGCGTCGTCTAGTCAA 59.661 47.619 0.00 0.00 0.00 3.18
3243 5347 1.335689 ACAGTTTGGCGTCGTCTAGTC 60.336 52.381 0.00 0.00 0.00 2.59
3245 5349 1.060713 CACAGTTTGGCGTCGTCTAG 58.939 55.000 0.00 0.00 0.00 2.43
3246 5350 0.942410 GCACAGTTTGGCGTCGTCTA 60.942 55.000 0.00 0.00 0.00 2.59
3247 5351 2.244651 GCACAGTTTGGCGTCGTCT 61.245 57.895 0.00 0.00 0.00 4.18
3248 5352 2.248431 GCACAGTTTGGCGTCGTC 59.752 61.111 0.00 0.00 0.00 4.20
3255 5359 2.051345 GCGAACGGCACAGTTTGG 60.051 61.111 3.58 0.00 42.87 3.28
3256 5360 2.051345 GGCGAACGGCACAGTTTG 60.051 61.111 15.29 0.00 46.16 2.93
3257 5361 2.515057 TGGCGAACGGCACAGTTT 60.515 55.556 18.54 0.00 45.85 2.66
3258 5362 2.972505 CTGGCGAACGGCACAGTT 60.973 61.111 18.54 0.00 45.85 3.16
3259 5363 4.988598 CCTGGCGAACGGCACAGT 62.989 66.667 18.54 0.00 45.85 3.55
3265 5369 4.745751 TAACGGCCTGGCGAACGG 62.746 66.667 20.32 1.79 0.00 4.44
3266 5370 3.186047 CTAACGGCCTGGCGAACG 61.186 66.667 20.32 13.26 0.00 3.95
3268 5372 4.090588 CCCTAACGGCCTGGCGAA 62.091 66.667 20.32 6.44 0.00 4.70
3286 5390 0.585838 GGCCCAAAAATGCAAACGTG 59.414 50.000 0.00 0.00 0.00 4.49
3288 5392 1.233950 GGGGCCCAAAAATGCAAACG 61.234 55.000 26.86 0.00 0.00 3.60
3289 5393 0.179006 TGGGGCCCAAAAATGCAAAC 60.179 50.000 26.55 0.98 0.00 2.93
3290 5394 0.179006 GTGGGGCCCAAAAATGCAAA 60.179 50.000 30.70 0.00 34.18 3.68
3291 5395 1.453669 GTGGGGCCCAAAAATGCAA 59.546 52.632 30.70 0.00 34.18 4.08
3292 5396 2.524204 GGTGGGGCCCAAAAATGCA 61.524 57.895 30.70 7.44 34.18 3.96
3293 5397 2.223443 AGGTGGGGCCCAAAAATGC 61.223 57.895 30.70 14.06 38.26 3.56
3294 5398 1.126948 ACAGGTGGGGCCCAAAAATG 61.127 55.000 30.70 24.05 38.26 2.32
3298 5402 4.278513 CGACAGGTGGGGCCCAAA 62.279 66.667 30.70 8.53 38.26 3.28
3302 5406 3.501040 TTTTCCGACAGGTGGGGCC 62.501 63.158 0.00 0.00 39.05 5.80
3303 5407 1.971695 CTTTTCCGACAGGTGGGGC 60.972 63.158 0.46 0.00 39.05 5.80
3305 5409 1.515521 GCACTTTTCCGACAGGTGGG 61.516 60.000 0.00 0.00 39.05 4.61
3306 5410 0.535102 AGCACTTTTCCGACAGGTGG 60.535 55.000 0.00 0.00 39.05 4.61
3307 5411 0.868406 GAGCACTTTTCCGACAGGTG 59.132 55.000 0.00 0.00 39.05 4.00
3309 5413 1.593196 TTGAGCACTTTTCCGACAGG 58.407 50.000 0.00 0.00 39.46 4.00
3310 5414 2.031682 CCTTTGAGCACTTTTCCGACAG 60.032 50.000 0.00 0.00 0.00 3.51
3312 5416 1.335051 GCCTTTGAGCACTTTTCCGAC 60.335 52.381 0.00 0.00 0.00 4.79
3313 5417 0.951558 GCCTTTGAGCACTTTTCCGA 59.048 50.000 0.00 0.00 0.00 4.55
3314 5418 0.039165 GGCCTTTGAGCACTTTTCCG 60.039 55.000 0.00 0.00 0.00 4.30
3315 5419 0.039165 CGGCCTTTGAGCACTTTTCC 60.039 55.000 0.00 0.00 0.00 3.13
3316 5420 0.664466 GCGGCCTTTGAGCACTTTTC 60.664 55.000 0.00 0.00 0.00 2.29
3318 5422 1.391157 TTGCGGCCTTTGAGCACTTT 61.391 50.000 0.00 0.00 40.92 2.66
3319 5423 1.391157 TTTGCGGCCTTTGAGCACTT 61.391 50.000 0.00 0.00 40.92 3.16
3320 5424 1.799258 CTTTGCGGCCTTTGAGCACT 61.799 55.000 0.00 0.00 40.92 4.40
3321 5425 1.372128 CTTTGCGGCCTTTGAGCAC 60.372 57.895 0.00 0.00 40.92 4.40
3322 5426 3.041701 CTTTGCGGCCTTTGAGCA 58.958 55.556 0.00 0.00 39.33 4.26
3323 5427 2.431430 GCTTTGCGGCCTTTGAGC 60.431 61.111 0.00 1.34 0.00 4.26
3324 5428 0.665369 CTTGCTTTGCGGCCTTTGAG 60.665 55.000 0.00 0.00 0.00 3.02
3327 5431 1.067916 CACTTGCTTTGCGGCCTTT 59.932 52.632 0.00 0.00 0.00 3.11
3329 5433 1.589716 GATCACTTGCTTTGCGGCCT 61.590 55.000 0.00 0.00 0.00 5.19
3330 5434 1.153958 GATCACTTGCTTTGCGGCC 60.154 57.895 0.00 0.00 0.00 6.13
3331 5435 0.455633 CTGATCACTTGCTTTGCGGC 60.456 55.000 0.00 0.00 0.00 6.53
3332 5436 0.877071 ACTGATCACTTGCTTTGCGG 59.123 50.000 0.00 0.00 0.00 5.69
3334 5438 3.911661 AGAACTGATCACTTGCTTTGC 57.088 42.857 0.00 0.00 0.00 3.68
3337 5441 5.686159 CAAGAAGAACTGATCACTTGCTT 57.314 39.130 8.13 1.42 37.64 3.91
3340 5444 5.428496 TTGCAAGAAGAACTGATCACTTG 57.572 39.130 14.15 14.15 42.33 3.16
3341 5445 6.455360 TTTTGCAAGAAGAACTGATCACTT 57.545 33.333 0.00 0.00 0.00 3.16
3362 5466 6.678655 GCCACTACGTTTCTGGTAAACTTTTT 60.679 38.462 0.00 0.00 0.00 1.94
3363 5467 5.220912 GCCACTACGTTTCTGGTAAACTTTT 60.221 40.000 0.00 0.00 0.00 2.27
3364 5468 4.274214 GCCACTACGTTTCTGGTAAACTTT 59.726 41.667 0.00 0.00 0.00 2.66
3375 5851 1.508632 TGCAGAAGCCACTACGTTTC 58.491 50.000 0.00 0.00 41.13 2.78
3379 5855 3.559238 ATTTTTGCAGAAGCCACTACG 57.441 42.857 0.00 0.00 41.13 3.51
3380 5856 9.586435 AATTTATATTTTTGCAGAAGCCACTAC 57.414 29.630 0.00 0.00 41.13 2.73
3382 5858 9.807649 CTAATTTATATTTTTGCAGAAGCCACT 57.192 29.630 0.00 0.00 41.13 4.00
3383 5859 9.801873 TCTAATTTATATTTTTGCAGAAGCCAC 57.198 29.630 0.00 0.00 41.13 5.01
3421 5897 1.067821 CCACGGCTAGGTTTGCAAAAA 59.932 47.619 14.67 1.65 0.00 1.94
3422 5898 0.671251 CCACGGCTAGGTTTGCAAAA 59.329 50.000 14.67 0.00 0.00 2.44
3423 5899 0.466555 ACCACGGCTAGGTTTGCAAA 60.467 50.000 8.05 8.05 35.33 3.68
3424 5900 0.397187 TACCACGGCTAGGTTTGCAA 59.603 50.000 0.00 0.00 40.54 4.08
3426 5902 1.746470 ATTACCACGGCTAGGTTTGC 58.254 50.000 3.01 0.00 40.54 3.68
3427 5903 4.457949 AGAAAATTACCACGGCTAGGTTTG 59.542 41.667 3.01 0.00 40.54 2.93
3428 5904 4.457949 CAGAAAATTACCACGGCTAGGTTT 59.542 41.667 3.01 0.00 40.54 3.27
3431 5907 2.354821 GCAGAAAATTACCACGGCTAGG 59.645 50.000 0.00 0.00 0.00 3.02
3432 5908 3.270877 AGCAGAAAATTACCACGGCTAG 58.729 45.455 0.00 0.00 32.82 3.42
3433 5909 3.343941 AGCAGAAAATTACCACGGCTA 57.656 42.857 0.00 0.00 32.82 3.93
3434 5910 2.200373 AGCAGAAAATTACCACGGCT 57.800 45.000 0.00 0.00 0.00 5.52
3435 5911 3.297830 AAAGCAGAAAATTACCACGGC 57.702 42.857 0.00 0.00 0.00 5.68
3437 5913 7.136119 TGAGTTAAAAGCAGAAAATTACCACG 58.864 34.615 0.00 0.00 0.00 4.94
3438 5914 8.865590 TTGAGTTAAAAGCAGAAAATTACCAC 57.134 30.769 0.00 0.00 0.00 4.16
3440 5916 9.308318 TGTTTGAGTTAAAAGCAGAAAATTACC 57.692 29.630 0.00 0.00 0.00 2.85
3447 5923 7.551585 TCCAAATGTTTGAGTTAAAAGCAGAA 58.448 30.769 7.04 0.00 40.55 3.02
3449 5925 7.439056 ACATCCAAATGTTTGAGTTAAAAGCAG 59.561 33.333 7.04 0.00 43.74 4.24
3451 5927 7.713764 ACATCCAAATGTTTGAGTTAAAAGC 57.286 32.000 7.04 0.00 43.74 3.51
3465 5941 3.073678 TGTCCGTCTCAACATCCAAATG 58.926 45.455 0.00 0.00 38.93 2.32
3466 5942 3.417069 TGTCCGTCTCAACATCCAAAT 57.583 42.857 0.00 0.00 0.00 2.32
3467 5943 2.920724 TGTCCGTCTCAACATCCAAA 57.079 45.000 0.00 0.00 0.00 3.28
3480 8328 1.006102 CGAGTCTGCCTTTGTCCGT 60.006 57.895 0.00 0.00 0.00 4.69
3481 8329 1.738099 CCGAGTCTGCCTTTGTCCG 60.738 63.158 0.00 0.00 0.00 4.79
3483 8331 2.100605 ATTCCGAGTCTGCCTTTGTC 57.899 50.000 0.00 0.00 0.00 3.18
3484 8332 2.154462 CAATTCCGAGTCTGCCTTTGT 58.846 47.619 0.00 0.00 0.00 2.83
3485 8333 1.135575 GCAATTCCGAGTCTGCCTTTG 60.136 52.381 0.00 0.00 0.00 2.77
3486 8334 1.168714 GCAATTCCGAGTCTGCCTTT 58.831 50.000 0.00 0.00 0.00 3.11
3487 8335 0.326264 AGCAATTCCGAGTCTGCCTT 59.674 50.000 0.00 0.00 35.33 4.35
3489 8337 2.246719 ATAGCAATTCCGAGTCTGCC 57.753 50.000 0.00 0.00 35.33 4.85
3491 8339 6.036517 GCCATATTATAGCAATTCCGAGTCTG 59.963 42.308 0.00 0.00 0.00 3.51
3492 8340 6.109359 GCCATATTATAGCAATTCCGAGTCT 58.891 40.000 0.00 0.00 0.00 3.24
3493 8341 5.294552 GGCCATATTATAGCAATTCCGAGTC 59.705 44.000 0.00 0.00 0.00 3.36
3494 8342 5.045578 AGGCCATATTATAGCAATTCCGAGT 60.046 40.000 5.01 0.00 0.00 4.18
3495 8343 5.431765 AGGCCATATTATAGCAATTCCGAG 58.568 41.667 5.01 0.00 0.00 4.63
3496 8344 5.428253 GAGGCCATATTATAGCAATTCCGA 58.572 41.667 5.01 0.00 0.00 4.55
3497 8345 4.576463 GGAGGCCATATTATAGCAATTCCG 59.424 45.833 5.01 0.00 0.00 4.30
3499 8347 7.466746 TTTGGAGGCCATATTATAGCAATTC 57.533 36.000 5.01 0.00 31.53 2.17
3500 8348 8.439964 AATTTGGAGGCCATATTATAGCAATT 57.560 30.769 5.01 0.00 34.37 2.32
3501 8349 8.439964 AAATTTGGAGGCCATATTATAGCAAT 57.560 30.769 5.01 0.00 34.89 3.56
3502 8350 7.508636 TGAAATTTGGAGGCCATATTATAGCAA 59.491 33.333 5.01 0.00 34.89 3.91
3503 8351 7.009550 TGAAATTTGGAGGCCATATTATAGCA 58.990 34.615 5.01 0.00 34.89 3.49
3504 8352 7.466746 TGAAATTTGGAGGCCATATTATAGC 57.533 36.000 5.01 0.00 34.89 2.97
3505 8353 9.471702 AGATGAAATTTGGAGGCCATATTATAG 57.528 33.333 5.01 0.00 34.89 1.31
3507 8355 9.247861 GTAGATGAAATTTGGAGGCCATATTAT 57.752 33.333 5.01 0.00 34.89 1.28
3509 8357 6.494835 GGTAGATGAAATTTGGAGGCCATATT 59.505 38.462 5.01 0.00 36.90 1.28
3510 8358 6.012745 GGTAGATGAAATTTGGAGGCCATAT 58.987 40.000 5.01 0.00 31.53 1.78
3511 8359 5.134339 AGGTAGATGAAATTTGGAGGCCATA 59.866 40.000 5.01 0.00 31.53 2.74
3513 8361 3.269381 AGGTAGATGAAATTTGGAGGCCA 59.731 43.478 5.01 0.00 0.00 5.36
3514 8362 3.903467 AGGTAGATGAAATTTGGAGGCC 58.097 45.455 0.00 0.00 0.00 5.19
3515 8363 5.529060 CACTAGGTAGATGAAATTTGGAGGC 59.471 44.000 0.00 0.00 0.00 4.70
3516 8364 6.058183 CCACTAGGTAGATGAAATTTGGAGG 58.942 44.000 0.00 0.00 0.00 4.30
3517 8365 6.058183 CCCACTAGGTAGATGAAATTTGGAG 58.942 44.000 0.00 0.00 0.00 3.86
3520 8368 6.653989 AGTCCCACTAGGTAGATGAAATTTG 58.346 40.000 0.00 0.00 36.75 2.32
3521 8369 6.674419 AGAGTCCCACTAGGTAGATGAAATTT 59.326 38.462 0.00 0.00 36.75 1.82
3524 8438 5.208294 AGAGTCCCACTAGGTAGATGAAA 57.792 43.478 0.00 0.00 36.75 2.69
3526 8440 5.280062 CGATAGAGTCCCACTAGGTAGATGA 60.280 48.000 0.00 0.00 35.48 2.92
3534 8448 4.515944 CCACTAACGATAGAGTCCCACTAG 59.484 50.000 6.73 0.00 41.38 2.57
3536 8450 3.288964 CCACTAACGATAGAGTCCCACT 58.711 50.000 6.73 0.00 41.38 4.00
3542 8456 6.142259 AGGATATCCCACTAACGATAGAGT 57.858 41.667 18.56 0.00 37.31 3.24
3543 8457 7.363094 GGAAAGGATATCCCACTAACGATAGAG 60.363 44.444 18.56 0.00 37.31 2.43
3544 8458 6.436532 GGAAAGGATATCCCACTAACGATAGA 59.563 42.308 18.56 0.00 37.31 1.98
3545 8459 6.631962 GGAAAGGATATCCCACTAACGATAG 58.368 44.000 18.56 0.00 39.14 2.08
3546 8460 6.600882 GGAAAGGATATCCCACTAACGATA 57.399 41.667 18.56 0.00 37.41 2.92
3547 8461 5.485209 GGAAAGGATATCCCACTAACGAT 57.515 43.478 18.56 0.00 37.41 3.73
3557 8471 2.640332 GGAGAGTGGGGAAAGGATATCC 59.360 54.545 14.41 14.41 36.16 2.59
3558 8472 2.640332 GGGAGAGTGGGGAAAGGATATC 59.360 54.545 0.00 0.00 0.00 1.63
3559 8473 2.254023 AGGGAGAGTGGGGAAAGGATAT 59.746 50.000 0.00 0.00 0.00 1.63
3560 8474 1.657162 AGGGAGAGTGGGGAAAGGATA 59.343 52.381 0.00 0.00 0.00 2.59
3561 8475 0.423544 AGGGAGAGTGGGGAAAGGAT 59.576 55.000 0.00 0.00 0.00 3.24
3562 8476 0.196118 AAGGGAGAGTGGGGAAAGGA 59.804 55.000 0.00 0.00 0.00 3.36
3564 8478 0.621082 GGAAGGGAGAGTGGGGAAAG 59.379 60.000 0.00 0.00 0.00 2.62
3567 8481 0.326618 GATGGAAGGGAGAGTGGGGA 60.327 60.000 0.00 0.00 0.00 4.81
3570 8484 1.127343 GAGGATGGAAGGGAGAGTGG 58.873 60.000 0.00 0.00 0.00 4.00
3571 8485 1.484240 GTGAGGATGGAAGGGAGAGTG 59.516 57.143 0.00 0.00 0.00 3.51
3572 8486 1.623834 GGTGAGGATGGAAGGGAGAGT 60.624 57.143 0.00 0.00 0.00 3.24
3573 8487 1.127343 GGTGAGGATGGAAGGGAGAG 58.873 60.000 0.00 0.00 0.00 3.20
3574 8488 0.687757 CGGTGAGGATGGAAGGGAGA 60.688 60.000 0.00 0.00 0.00 3.71
3576 8490 1.080354 ACGGTGAGGATGGAAGGGA 59.920 57.895 0.00 0.00 0.00 4.20
3577 8491 1.221840 CACGGTGAGGATGGAAGGG 59.778 63.158 0.74 0.00 0.00 3.95
3579 8493 3.748863 CTCACGGTGAGGATGGAAG 57.251 57.895 26.72 3.03 40.71 3.46
3591 8505 2.038329 TAGTCCCCACCCTCACGG 59.962 66.667 0.00 0.00 37.81 4.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.