Multiple sequence alignment - TraesCS7D01G099100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G099100 chr7D 100.000 4197 0 0 1 4197 59170928 59166732 0.000000e+00 7751.0
1 TraesCS7D01G099100 chr7D 81.322 1135 168 26 926 2030 59379044 59377924 0.000000e+00 881.0
2 TraesCS7D01G099100 chr7D 85.736 673 43 12 2858 3498 59377388 59376737 0.000000e+00 662.0
3 TraesCS7D01G099100 chr7D 85.876 354 18 19 2120 2465 59377909 59377580 8.640000e-92 348.0
4 TraesCS7D01G099100 chr7D 76.972 469 86 11 1582 2034 5776961 5777423 9.010000e-62 248.0
5 TraesCS7D01G099100 chr7D 85.492 193 21 6 4 193 454144018 454143830 1.190000e-45 195.0
6 TraesCS7D01G099100 chr7D 92.188 128 7 3 2197 2322 5776949 5776823 1.200000e-40 178.0
7 TraesCS7D01G099100 chr4A 91.071 1344 73 13 721 2029 677123256 677121925 0.000000e+00 1773.0
8 TraesCS7D01G099100 chr4A 86.724 1514 107 30 2104 3569 677121910 677120443 0.000000e+00 1596.0
9 TraesCS7D01G099100 chr4A 80.368 1141 180 27 919 2030 677441796 677440671 0.000000e+00 826.0
10 TraesCS7D01G099100 chr4A 80.225 1153 160 33 926 2026 677675231 677674095 0.000000e+00 804.0
11 TraesCS7D01G099100 chr4A 87.190 726 38 18 2855 3546 677439993 677439289 0.000000e+00 774.0
12 TraesCS7D01G099100 chr4A 91.409 291 16 3 3260 3547 677672768 677672484 1.410000e-104 390.0
13 TraesCS7D01G099100 chr4A 82.968 411 39 9 2378 2772 677440393 677439998 4.020000e-90 342.0
14 TraesCS7D01G099100 chr4A 83.281 317 29 9 2960 3263 677673426 677673121 1.920000e-68 270.0
15 TraesCS7D01G099100 chr4A 89.423 208 10 5 3776 3973 677118810 677118605 6.970000e-63 252.0
16 TraesCS7D01G099100 chr4A 93.293 164 10 1 4034 4197 729218882 729218720 1.510000e-59 241.0
17 TraesCS7D01G099100 chr4A 93.210 162 11 0 4034 4195 460501483 460501644 5.420000e-59 239.0
18 TraesCS7D01G099100 chr4A 90.323 155 7 4 3649 3803 677120451 677120305 3.310000e-46 196.0
19 TraesCS7D01G099100 chr4A 90.076 131 11 2 2194 2322 736824941 736825071 7.220000e-38 169.0
20 TraesCS7D01G099100 chr4A 90.625 128 9 3 2197 2322 734396438 734396564 2.600000e-37 167.0
21 TraesCS7D01G099100 chr4D 98.361 549 9 0 1 549 129779486 129778938 0.000000e+00 965.0
22 TraesCS7D01G099100 chr7A 92.954 667 36 5 3373 4036 63764471 63763813 0.000000e+00 961.0
23 TraesCS7D01G099100 chr7A 80.631 1141 181 19 919 2030 63768370 63767241 0.000000e+00 846.0
24 TraesCS7D01G099100 chr7A 81.783 1021 97 40 2120 3114 63767226 63766269 0.000000e+00 773.0
25 TraesCS7D01G099100 chr7A 93.827 162 10 0 4034 4195 714683793 714683632 1.170000e-60 244.0
26 TraesCS7D01G099100 chr7A 82.051 273 33 10 1 267 41723008 41722746 7.060000e-53 219.0
27 TraesCS7D01G099100 chr7A 83.665 251 14 5 3116 3342 63764716 63764469 1.180000e-50 211.0
28 TraesCS7D01G099100 chr7A 81.455 275 31 13 1 267 41752411 41752149 1.530000e-49 207.0
29 TraesCS7D01G099100 chr7B 93.514 555 28 5 1 549 672487074 672486522 0.000000e+00 819.0
30 TraesCS7D01G099100 chr3A 84.701 451 53 6 3565 4015 83525521 83525955 1.790000e-118 436.0
31 TraesCS7D01G099100 chr3A 83.916 286 39 7 3754 4036 746458464 746458745 2.490000e-67 267.0
32 TraesCS7D01G099100 chr3A 76.034 580 75 31 1 544 441140892 441140341 4.190000e-60 243.0
33 TraesCS7D01G099100 chr2B 82.826 460 68 6 3577 4034 691991266 691991716 6.540000e-108 401.0
34 TraesCS7D01G099100 chr3B 93.827 162 10 0 4034 4195 472743250 472743089 1.170000e-60 244.0
35 TraesCS7D01G099100 chr3B 83.838 198 19 8 1 193 422328844 422329033 4.310000e-40 176.0
36 TraesCS7D01G099100 chr6B 93.293 164 11 0 4034 4197 520274549 520274712 4.190000e-60 243.0
37 TraesCS7D01G099100 chr6B 92.683 164 12 0 4034 4197 136375042 136375205 1.950000e-58 237.0
38 TraesCS7D01G099100 chr4B 93.293 164 11 0 4034 4197 442307907 442308070 4.190000e-60 243.0
39 TraesCS7D01G099100 chr1B 93.293 164 11 0 4034 4197 677174479 677174316 4.190000e-60 243.0
40 TraesCS7D01G099100 chr1A 93.210 162 11 0 4034 4195 255230932 255231093 5.420000e-59 239.0
41 TraesCS7D01G099100 chr1A 76.871 441 67 16 3599 4029 478459406 478459821 2.540000e-52 217.0
42 TraesCS7D01G099100 chrUn 80.272 294 38 13 1 287 83370045 83370325 1.980000e-48 204.0
43 TraesCS7D01G099100 chr1D 85.455 110 16 0 3576 3685 40874957 40875066 9.540000e-22 115.0
44 TraesCS7D01G099100 chr3D 97.059 34 1 0 2321 2354 531749601 531749568 1.630000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G099100 chr7D 59166732 59170928 4196 True 7751.000000 7751 100.000000 1 4197 1 chr7D.!!$R2 4196
1 TraesCS7D01G099100 chr7D 59376737 59379044 2307 True 630.333333 881 84.311333 926 3498 3 chr7D.!!$R4 2572
2 TraesCS7D01G099100 chr4A 677118605 677123256 4651 True 954.250000 1773 89.385250 721 3973 4 chr4A.!!$R2 3252
3 TraesCS7D01G099100 chr4A 677439289 677441796 2507 True 647.333333 826 83.508667 919 3546 3 chr4A.!!$R3 2627
4 TraesCS7D01G099100 chr4A 677672484 677675231 2747 True 488.000000 804 84.971667 926 3547 3 chr4A.!!$R4 2621
5 TraesCS7D01G099100 chr4D 129778938 129779486 548 True 965.000000 965 98.361000 1 549 1 chr4D.!!$R1 548
6 TraesCS7D01G099100 chr7A 63763813 63768370 4557 True 697.750000 961 84.758250 919 4036 4 chr7A.!!$R4 3117
7 TraesCS7D01G099100 chr7B 672486522 672487074 552 True 819.000000 819 93.514000 1 549 1 chr7B.!!$R1 548
8 TraesCS7D01G099100 chr3A 441140341 441140892 551 True 243.000000 243 76.034000 1 544 1 chr3A.!!$R1 543

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
89 94 0.031994 GCAAAAACCCGTGAGTGCAT 59.968 50.0 0.00 0.00 32.29 3.96 F
625 663 0.179020 TGTTTCACTGGGCTGGTCTG 60.179 55.0 0.00 0.00 0.00 3.51 F
707 745 0.179250 CGTTTGTGGACTCGATTGCG 60.179 55.0 0.00 0.00 39.35 4.85 F
1924 2080 0.032678 ATGGTATCTGCTTCGAGGCG 59.967 55.0 15.28 9.75 34.52 5.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1462 1585 0.107945 AGGAAGCAATGGAGCGAGTC 60.108 55.0 0.00 0.0 40.15 3.36 R
1502 1631 0.178990 GAGCACACTGAAGGGGGTTT 60.179 55.0 0.00 0.0 0.00 3.27 R
2059 2221 0.250234 TTCTCCGTGCCCATGAAGAG 59.750 55.0 0.00 0.0 0.00 2.85 R
3894 7632 0.810648 GATTGTGATTTGAGGGCGCA 59.189 50.0 10.83 0.0 0.00 6.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 75 8.867112 AAAATGCTATGAATGCTTGTTCTATG 57.133 30.769 0.00 0.00 0.00 2.23
89 94 0.031994 GCAAAAACCCGTGAGTGCAT 59.968 50.000 0.00 0.00 32.29 3.96
549 587 4.561105 GTTAAGGAGTGGACTGAGACTTG 58.439 47.826 0.00 0.00 0.00 3.16
550 588 2.390225 AGGAGTGGACTGAGACTTGT 57.610 50.000 0.00 0.00 0.00 3.16
551 589 3.527507 AGGAGTGGACTGAGACTTGTA 57.472 47.619 0.00 0.00 0.00 2.41
552 590 3.158676 AGGAGTGGACTGAGACTTGTAC 58.841 50.000 0.00 0.00 0.00 2.90
553 591 3.158676 GGAGTGGACTGAGACTTGTACT 58.841 50.000 0.00 0.00 0.00 2.73
554 592 4.043059 AGGAGTGGACTGAGACTTGTACTA 59.957 45.833 0.00 0.00 0.00 1.82
555 593 4.951094 GGAGTGGACTGAGACTTGTACTAT 59.049 45.833 0.00 0.00 0.00 2.12
556 594 5.419471 GGAGTGGACTGAGACTTGTACTATT 59.581 44.000 0.00 0.00 0.00 1.73
557 595 6.602406 GGAGTGGACTGAGACTTGTACTATTA 59.398 42.308 0.00 0.00 0.00 0.98
558 596 7.201750 GGAGTGGACTGAGACTTGTACTATTAG 60.202 44.444 0.00 0.00 0.00 1.73
559 597 6.603997 AGTGGACTGAGACTTGTACTATTAGG 59.396 42.308 0.00 0.00 0.00 2.69
560 598 6.377712 GTGGACTGAGACTTGTACTATTAGGT 59.622 42.308 0.00 0.00 0.00 3.08
561 599 6.952358 TGGACTGAGACTTGTACTATTAGGTT 59.048 38.462 0.00 0.00 0.00 3.50
562 600 7.093902 TGGACTGAGACTTGTACTATTAGGTTG 60.094 40.741 0.00 0.00 0.00 3.77
563 601 7.171630 ACTGAGACTTGTACTATTAGGTTGG 57.828 40.000 0.00 0.00 0.00 3.77
564 602 6.952358 ACTGAGACTTGTACTATTAGGTTGGA 59.048 38.462 0.00 0.00 0.00 3.53
565 603 7.620094 ACTGAGACTTGTACTATTAGGTTGGAT 59.380 37.037 0.00 0.00 0.00 3.41
566 604 8.375493 TGAGACTTGTACTATTAGGTTGGATT 57.625 34.615 0.00 0.00 0.00 3.01
567 605 8.475639 TGAGACTTGTACTATTAGGTTGGATTC 58.524 37.037 0.00 0.00 0.00 2.52
568 606 8.375493 AGACTTGTACTATTAGGTTGGATTCA 57.625 34.615 0.00 0.00 0.00 2.57
569 607 8.478877 AGACTTGTACTATTAGGTTGGATTCAG 58.521 37.037 0.00 0.00 0.00 3.02
570 608 8.147244 ACTTGTACTATTAGGTTGGATTCAGT 57.853 34.615 0.00 0.00 0.00 3.41
571 609 8.041323 ACTTGTACTATTAGGTTGGATTCAGTG 58.959 37.037 0.00 0.00 0.00 3.66
572 610 6.346096 TGTACTATTAGGTTGGATTCAGTGC 58.654 40.000 0.00 0.00 0.00 4.40
573 611 5.700402 ACTATTAGGTTGGATTCAGTGCT 57.300 39.130 0.00 0.00 0.00 4.40
574 612 6.808321 ACTATTAGGTTGGATTCAGTGCTA 57.192 37.500 0.00 0.00 0.00 3.49
575 613 7.195374 ACTATTAGGTTGGATTCAGTGCTAA 57.805 36.000 0.00 0.00 0.00 3.09
576 614 7.806180 ACTATTAGGTTGGATTCAGTGCTAAT 58.194 34.615 0.00 0.00 0.00 1.73
577 615 6.949352 ATTAGGTTGGATTCAGTGCTAATG 57.051 37.500 0.00 0.00 0.00 1.90
578 616 3.624777 AGGTTGGATTCAGTGCTAATGG 58.375 45.455 0.00 0.00 0.00 3.16
579 617 3.266772 AGGTTGGATTCAGTGCTAATGGA 59.733 43.478 0.00 0.00 0.00 3.41
580 618 3.378427 GGTTGGATTCAGTGCTAATGGAC 59.622 47.826 0.00 0.00 34.56 4.02
581 619 3.281727 TGGATTCAGTGCTAATGGACC 57.718 47.619 0.00 0.00 34.93 4.46
582 620 2.213499 GGATTCAGTGCTAATGGACCG 58.787 52.381 0.00 0.00 34.93 4.79
583 621 2.158957 GGATTCAGTGCTAATGGACCGA 60.159 50.000 0.00 0.00 34.93 4.69
584 622 3.531538 GATTCAGTGCTAATGGACCGAA 58.468 45.455 0.00 0.00 35.85 4.30
585 623 2.672961 TCAGTGCTAATGGACCGAAG 57.327 50.000 0.00 0.00 34.93 3.79
586 624 1.009829 CAGTGCTAATGGACCGAAGC 58.990 55.000 5.76 5.76 34.93 3.86
587 625 0.905357 AGTGCTAATGGACCGAAGCT 59.095 50.000 12.23 0.00 34.93 3.74
588 626 2.108168 AGTGCTAATGGACCGAAGCTA 58.892 47.619 12.23 0.00 34.93 3.32
589 627 2.101582 AGTGCTAATGGACCGAAGCTAG 59.898 50.000 12.23 0.00 34.93 3.42
590 628 1.412710 TGCTAATGGACCGAAGCTAGG 59.587 52.381 12.23 6.61 35.95 3.02
591 629 1.413077 GCTAATGGACCGAAGCTAGGT 59.587 52.381 13.00 13.00 46.16 3.08
592 630 2.626743 GCTAATGGACCGAAGCTAGGTA 59.373 50.000 13.10 0.60 43.01 3.08
593 631 3.069158 GCTAATGGACCGAAGCTAGGTAA 59.931 47.826 13.10 6.27 43.01 2.85
594 632 4.442472 GCTAATGGACCGAAGCTAGGTAAA 60.442 45.833 13.10 5.95 43.01 2.01
595 633 3.821421 ATGGACCGAAGCTAGGTAAAG 57.179 47.619 13.10 0.00 43.01 1.85
596 634 2.532843 TGGACCGAAGCTAGGTAAAGT 58.467 47.619 13.10 0.00 43.01 2.66
597 635 3.700538 TGGACCGAAGCTAGGTAAAGTA 58.299 45.455 13.10 0.00 43.01 2.24
598 636 4.088634 TGGACCGAAGCTAGGTAAAGTAA 58.911 43.478 13.10 0.00 43.01 2.24
599 637 4.082026 TGGACCGAAGCTAGGTAAAGTAAC 60.082 45.833 13.10 0.66 43.01 2.50
600 638 4.082026 GGACCGAAGCTAGGTAAAGTAACA 60.082 45.833 13.10 0.00 43.01 2.41
601 639 5.394993 GGACCGAAGCTAGGTAAAGTAACAT 60.395 44.000 13.10 0.00 43.01 2.71
602 640 5.658468 ACCGAAGCTAGGTAAAGTAACATC 58.342 41.667 11.65 0.00 40.80 3.06
603 641 5.421374 ACCGAAGCTAGGTAAAGTAACATCT 59.579 40.000 11.65 0.00 40.80 2.90
604 642 6.070938 ACCGAAGCTAGGTAAAGTAACATCTT 60.071 38.462 11.65 0.00 40.80 2.40
605 643 6.817140 CCGAAGCTAGGTAAAGTAACATCTTT 59.183 38.462 0.00 0.00 40.22 2.52
606 644 7.333672 CCGAAGCTAGGTAAAGTAACATCTTTT 59.666 37.037 0.00 0.00 38.40 2.27
607 645 8.169268 CGAAGCTAGGTAAAGTAACATCTTTTG 58.831 37.037 0.00 0.00 38.40 2.44
608 646 8.919777 AAGCTAGGTAAAGTAACATCTTTTGT 57.080 30.769 0.00 0.00 41.53 2.83
610 648 9.350951 AGCTAGGTAAAGTAACATCTTTTGTTT 57.649 29.630 0.00 0.00 46.51 2.83
611 649 9.608617 GCTAGGTAAAGTAACATCTTTTGTTTC 57.391 33.333 0.00 0.00 46.51 2.78
614 652 9.185680 AGGTAAAGTAACATCTTTTGTTTCACT 57.814 29.630 0.00 0.00 46.51 3.41
615 653 9.233232 GGTAAAGTAACATCTTTTGTTTCACTG 57.767 33.333 0.00 0.00 46.51 3.66
616 654 9.233232 GTAAAGTAACATCTTTTGTTTCACTGG 57.767 33.333 0.00 0.00 46.51 4.00
617 655 6.391227 AGTAACATCTTTTGTTTCACTGGG 57.609 37.500 0.00 0.00 46.51 4.45
618 656 3.733443 ACATCTTTTGTTTCACTGGGC 57.267 42.857 0.00 0.00 33.74 5.36
619 657 3.299503 ACATCTTTTGTTTCACTGGGCT 58.700 40.909 0.00 0.00 33.74 5.19
620 658 3.068590 ACATCTTTTGTTTCACTGGGCTG 59.931 43.478 0.00 0.00 33.74 4.85
621 659 2.031120 TCTTTTGTTTCACTGGGCTGG 58.969 47.619 0.00 0.00 0.00 4.85
622 660 1.756538 CTTTTGTTTCACTGGGCTGGT 59.243 47.619 0.00 0.00 0.00 4.00
623 661 1.398692 TTTGTTTCACTGGGCTGGTC 58.601 50.000 0.00 0.00 0.00 4.02
624 662 0.550914 TTGTTTCACTGGGCTGGTCT 59.449 50.000 0.00 0.00 0.00 3.85
625 663 0.179020 TGTTTCACTGGGCTGGTCTG 60.179 55.000 0.00 0.00 0.00 3.51
626 664 1.228245 TTTCACTGGGCTGGTCTGC 60.228 57.895 0.00 0.00 0.00 4.26
627 665 3.535629 TTCACTGGGCTGGTCTGCG 62.536 63.158 0.00 0.00 0.00 5.18
630 668 3.390521 CTGGGCTGGTCTGCGGTA 61.391 66.667 0.00 0.00 0.00 4.02
631 669 2.925706 TGGGCTGGTCTGCGGTAA 60.926 61.111 0.00 0.00 0.00 2.85
632 670 2.349755 GGGCTGGTCTGCGGTAAA 59.650 61.111 0.00 0.00 0.00 2.01
633 671 1.302993 GGGCTGGTCTGCGGTAAAA 60.303 57.895 0.00 0.00 0.00 1.52
634 672 1.583495 GGGCTGGTCTGCGGTAAAAC 61.583 60.000 0.00 0.00 0.00 2.43
635 673 1.495951 GCTGGTCTGCGGTAAAACG 59.504 57.895 0.00 0.00 0.00 3.60
655 693 2.945447 CATCAAATGCCGTGGTCAAT 57.055 45.000 0.00 0.00 0.00 2.57
657 695 3.956233 CATCAAATGCCGTGGTCAATAG 58.044 45.455 0.00 0.00 0.00 1.73
658 696 3.342377 TCAAATGCCGTGGTCAATAGA 57.658 42.857 0.00 0.00 0.00 1.98
659 697 3.006940 TCAAATGCCGTGGTCAATAGAC 58.993 45.455 0.00 0.00 44.21 2.59
660 698 2.746904 CAAATGCCGTGGTCAATAGACA 59.253 45.455 0.00 0.00 46.80 3.41
661 699 3.281727 AATGCCGTGGTCAATAGACAT 57.718 42.857 0.00 0.00 46.80 3.06
662 700 2.309528 TGCCGTGGTCAATAGACATC 57.690 50.000 0.00 0.00 46.80 3.06
663 701 1.552792 TGCCGTGGTCAATAGACATCA 59.447 47.619 0.00 0.00 46.80 3.07
664 702 1.933853 GCCGTGGTCAATAGACATCAC 59.066 52.381 0.00 0.00 46.80 3.06
666 704 2.876091 CGTGGTCAATAGACATCACGT 58.124 47.619 14.76 0.00 46.22 4.49
667 705 2.852413 CGTGGTCAATAGACATCACGTC 59.148 50.000 14.76 0.00 46.22 4.34
674 712 2.125673 GACATCACGTCGGGGGTG 60.126 66.667 0.00 0.00 34.19 4.61
675 713 2.920912 ACATCACGTCGGGGGTGT 60.921 61.111 0.00 0.00 36.76 4.16
676 714 2.434185 CATCACGTCGGGGGTGTG 60.434 66.667 0.00 0.00 36.76 3.82
677 715 4.388499 ATCACGTCGGGGGTGTGC 62.388 66.667 0.00 0.00 36.76 4.57
687 725 4.982701 GGGTGTGCCTTGCTGCCT 62.983 66.667 0.00 0.00 34.45 4.75
688 726 3.368571 GGTGTGCCTTGCTGCCTC 61.369 66.667 0.00 0.00 0.00 4.70
689 727 3.730761 GTGTGCCTTGCTGCCTCG 61.731 66.667 0.00 0.00 0.00 4.63
690 728 4.254709 TGTGCCTTGCTGCCTCGT 62.255 61.111 0.00 0.00 0.00 4.18
691 729 2.980233 GTGCCTTGCTGCCTCGTT 60.980 61.111 0.00 0.00 0.00 3.85
692 730 2.203337 TGCCTTGCTGCCTCGTTT 60.203 55.556 0.00 0.00 0.00 3.60
693 731 2.256461 GCCTTGCTGCCTCGTTTG 59.744 61.111 0.00 0.00 0.00 2.93
694 732 2.555547 GCCTTGCTGCCTCGTTTGT 61.556 57.895 0.00 0.00 0.00 2.83
695 733 1.283793 CCTTGCTGCCTCGTTTGTG 59.716 57.895 0.00 0.00 0.00 3.33
696 734 1.283793 CTTGCTGCCTCGTTTGTGG 59.716 57.895 0.00 0.00 0.00 4.17
697 735 1.153066 TTGCTGCCTCGTTTGTGGA 60.153 52.632 0.00 0.00 0.00 4.02
698 736 1.444119 TTGCTGCCTCGTTTGTGGAC 61.444 55.000 0.00 0.00 0.00 4.02
699 737 1.598130 GCTGCCTCGTTTGTGGACT 60.598 57.895 0.00 0.00 0.00 3.85
700 738 1.569479 GCTGCCTCGTTTGTGGACTC 61.569 60.000 0.00 0.00 0.00 3.36
701 739 1.284982 CTGCCTCGTTTGTGGACTCG 61.285 60.000 0.00 0.00 0.00 4.18
702 740 1.006571 GCCTCGTTTGTGGACTCGA 60.007 57.895 0.00 0.00 0.00 4.04
703 741 0.389948 GCCTCGTTTGTGGACTCGAT 60.390 55.000 0.00 0.00 0.00 3.59
704 742 1.939838 GCCTCGTTTGTGGACTCGATT 60.940 52.381 0.00 0.00 0.00 3.34
705 743 1.726791 CCTCGTTTGTGGACTCGATTG 59.273 52.381 0.00 0.00 0.00 2.67
706 744 1.126846 CTCGTTTGTGGACTCGATTGC 59.873 52.381 0.00 0.00 0.00 3.56
707 745 0.179250 CGTTTGTGGACTCGATTGCG 60.179 55.000 0.00 0.00 39.35 4.85
708 746 0.452784 GTTTGTGGACTCGATTGCGC 60.453 55.000 0.00 0.00 37.46 6.09
709 747 0.602638 TTTGTGGACTCGATTGCGCT 60.603 50.000 9.73 0.00 37.46 5.92
710 748 1.014044 TTGTGGACTCGATTGCGCTC 61.014 55.000 9.73 0.00 37.46 5.03
711 749 2.167861 GTGGACTCGATTGCGCTCC 61.168 63.158 9.73 5.71 37.46 4.70
712 750 2.351244 TGGACTCGATTGCGCTCCT 61.351 57.895 9.73 0.00 35.96 3.69
713 751 1.035385 TGGACTCGATTGCGCTCCTA 61.035 55.000 9.73 0.00 35.96 2.94
714 752 0.318275 GGACTCGATTGCGCTCCTAG 60.318 60.000 9.73 2.23 37.46 3.02
715 753 0.937231 GACTCGATTGCGCTCCTAGC 60.937 60.000 9.73 0.00 38.02 3.42
716 754 1.663074 CTCGATTGCGCTCCTAGCC 60.663 63.158 9.73 0.00 38.18 3.93
717 755 2.081425 CTCGATTGCGCTCCTAGCCT 62.081 60.000 9.73 0.00 38.18 4.58
718 756 0.822121 TCGATTGCGCTCCTAGCCTA 60.822 55.000 9.73 0.00 38.18 3.93
719 757 0.387878 CGATTGCGCTCCTAGCCTAG 60.388 60.000 9.73 0.00 38.18 3.02
832 874 3.641436 ACCACATTTTTGAGAAACCTCCC 59.359 43.478 0.00 0.00 0.00 4.30
845 887 1.068352 ACCTCCCAGCTTTCCCACTT 61.068 55.000 0.00 0.00 0.00 3.16
847 889 1.228552 TCCCAGCTTTCCCACTTGC 60.229 57.895 0.00 0.00 0.00 4.01
850 892 2.985847 AGCTTTCCCACTTGCGCC 60.986 61.111 4.18 0.00 0.00 6.53
852 894 1.674322 GCTTTCCCACTTGCGCCTA 60.674 57.895 4.18 0.00 0.00 3.93
853 895 1.923227 GCTTTCCCACTTGCGCCTAC 61.923 60.000 4.18 0.00 0.00 3.18
854 896 0.321653 CTTTCCCACTTGCGCCTACT 60.322 55.000 4.18 0.00 0.00 2.57
856 898 1.192146 TTCCCACTTGCGCCTACTCT 61.192 55.000 4.18 0.00 0.00 3.24
857 899 1.448540 CCCACTTGCGCCTACTCTG 60.449 63.158 4.18 0.00 0.00 3.35
858 900 1.448540 CCACTTGCGCCTACTCTGG 60.449 63.158 4.18 0.00 0.00 3.86
901 961 2.140066 GCGTGCGCATCTAGATCTG 58.860 57.895 15.91 0.00 41.49 2.90
910 970 3.439154 GCATCTAGATCTGATCTCCCCA 58.561 50.000 22.66 5.63 40.76 4.96
960 1020 3.775654 CACCTCCCAGGCTCCGAC 61.776 72.222 0.00 0.00 39.63 4.79
1009 1089 2.456119 GCCGCTGAGATGACAACCG 61.456 63.158 0.00 0.00 0.00 4.44
1065 1163 3.391382 CCCACCTCCCTCGTGTCC 61.391 72.222 0.00 0.00 0.00 4.02
1231 1329 1.582968 GGCTACTTCGTGTCGGTCA 59.417 57.895 0.00 0.00 0.00 4.02
1387 1504 1.260538 CCTACTCCTCAGCAGCCACA 61.261 60.000 0.00 0.00 0.00 4.17
1393 1510 2.031616 TCAGCAGCCACAGTCAGC 59.968 61.111 0.00 0.00 0.00 4.26
1449 1572 3.253188 TGCGTATACCTATACCCGACAAC 59.747 47.826 0.00 0.00 36.13 3.32
1459 1582 1.078426 CCCGACAACCACATCTCCC 60.078 63.158 0.00 0.00 0.00 4.30
1462 1585 2.047274 ACAACCACATCTCCCGCG 60.047 61.111 0.00 0.00 0.00 6.46
1488 1617 4.183686 CATTGCTTCCTGCCGGCG 62.184 66.667 23.90 16.52 42.00 6.46
1681 1822 3.995526 CGCATCTATTGGAGGAGCA 57.004 52.632 0.00 0.00 0.00 4.26
1702 1843 1.393603 TACAGGAGATCAGCTCACCG 58.606 55.000 0.00 0.00 45.81 4.94
1746 1887 4.671590 TCCCACGTCGAGCTCCCA 62.672 66.667 8.47 0.00 0.00 4.37
1747 1888 4.436998 CCCACGTCGAGCTCCCAC 62.437 72.222 8.47 4.19 0.00 4.61
1830 1986 2.743752 CGTGGCCATGAGTCGCAAG 61.744 63.158 21.08 0.00 0.00 4.01
1886 2042 1.625818 CAAGTCCTGGGAGCTACAGTT 59.374 52.381 14.69 2.83 34.16 3.16
1924 2080 0.032678 ATGGTATCTGCTTCGAGGCG 59.967 55.000 15.28 9.75 34.52 5.52
1981 2140 3.002583 TGCTCTCCATGGGCACGA 61.003 61.111 13.02 2.98 0.00 4.35
1992 2151 3.508840 GGCACGAAGAATGGCGGG 61.509 66.667 0.00 0.00 32.45 6.13
2004 2163 0.396811 ATGGCGGGCTCCACTATTAC 59.603 55.000 2.38 0.00 39.25 1.89
2006 2165 1.300697 GCGGGCTCCACTATTACGG 60.301 63.158 0.00 0.00 0.00 4.02
2007 2166 1.366366 CGGGCTCCACTATTACGGG 59.634 63.158 0.00 0.00 0.00 5.28
2031 2193 2.646175 CCTGAAGAACGCCCTCCGA 61.646 63.158 0.00 0.00 41.02 4.55
2044 2206 4.050313 TCCGACCAGGAGAATGGG 57.950 61.111 0.00 0.00 45.98 4.00
2045 2207 2.190578 CCGACCAGGAGAATGGGC 59.809 66.667 0.00 0.00 45.82 5.36
2048 2210 2.671070 ACCAGGAGAATGGGCACG 59.329 61.111 0.00 0.00 45.25 5.34
2049 2211 2.124570 CCAGGAGAATGGGCACGG 60.125 66.667 0.00 0.00 36.64 4.94
2050 2212 2.669133 CCAGGAGAATGGGCACGGA 61.669 63.158 0.00 0.00 36.64 4.69
2051 2213 1.450312 CAGGAGAATGGGCACGGAC 60.450 63.158 0.00 0.00 0.00 4.79
2052 2214 2.511600 GGAGAATGGGCACGGACG 60.512 66.667 0.00 0.00 0.00 4.79
2053 2215 2.577059 GAGAATGGGCACGGACGA 59.423 61.111 0.00 0.00 0.00 4.20
2054 2216 1.144057 GAGAATGGGCACGGACGAT 59.856 57.895 0.00 0.00 0.00 3.73
2055 2217 1.153369 AGAATGGGCACGGACGATG 60.153 57.895 0.00 0.00 0.00 3.84
2056 2218 2.124736 AATGGGCACGGACGATGG 60.125 61.111 0.00 0.00 0.00 3.51
2057 2219 4.856801 ATGGGCACGGACGATGGC 62.857 66.667 0.00 5.60 41.73 4.40
2062 2224 4.498520 CACGGACGATGGCGCTCT 62.499 66.667 7.64 0.00 42.48 4.09
2063 2225 3.760035 ACGGACGATGGCGCTCTT 61.760 61.111 7.64 0.00 42.48 2.85
2064 2226 2.956964 CGGACGATGGCGCTCTTC 60.957 66.667 7.64 0.34 42.48 2.87
2065 2227 2.184322 GGACGATGGCGCTCTTCA 59.816 61.111 7.64 0.00 42.48 3.02
2066 2228 1.227380 GGACGATGGCGCTCTTCAT 60.227 57.895 7.64 1.02 42.48 2.57
2067 2229 1.493950 GGACGATGGCGCTCTTCATG 61.494 60.000 7.64 0.30 42.48 3.07
2068 2230 1.493950 GACGATGGCGCTCTTCATGG 61.494 60.000 7.64 6.08 42.48 3.66
2069 2231 2.249535 CGATGGCGCTCTTCATGGG 61.250 63.158 7.64 0.00 0.00 4.00
2070 2232 2.517875 ATGGCGCTCTTCATGGGC 60.518 61.111 7.64 0.00 41.70 5.36
2071 2233 3.348554 ATGGCGCTCTTCATGGGCA 62.349 57.895 7.64 0.00 43.77 5.36
2072 2234 3.512516 GGCGCTCTTCATGGGCAC 61.513 66.667 7.64 0.00 43.77 5.01
2073 2235 3.869272 GCGCTCTTCATGGGCACG 61.869 66.667 0.00 0.00 41.97 5.34
2074 2236 3.197790 CGCTCTTCATGGGCACGG 61.198 66.667 0.00 0.00 0.00 4.94
2075 2237 2.268920 GCTCTTCATGGGCACGGA 59.731 61.111 0.00 0.00 0.00 4.69
2076 2238 1.817099 GCTCTTCATGGGCACGGAG 60.817 63.158 0.00 0.00 0.00 4.63
2077 2239 1.900351 CTCTTCATGGGCACGGAGA 59.100 57.895 0.00 0.00 0.00 3.71
2078 2240 0.250234 CTCTTCATGGGCACGGAGAA 59.750 55.000 0.00 0.00 0.00 2.87
2079 2241 0.911769 TCTTCATGGGCACGGAGAAT 59.088 50.000 0.00 0.00 0.00 2.40
2080 2242 1.019673 CTTCATGGGCACGGAGAATG 58.980 55.000 0.00 0.00 0.00 2.67
2081 2243 0.394216 TTCATGGGCACGGAGAATGG 60.394 55.000 0.00 0.00 0.00 3.16
2082 2244 2.124151 ATGGGCACGGAGAATGGC 60.124 61.111 0.00 0.00 41.73 4.40
2083 2245 4.776322 TGGGCACGGAGAATGGCG 62.776 66.667 0.00 0.00 43.32 5.69
2087 2249 4.473520 CACGGAGAATGGCGGCCT 62.474 66.667 21.46 0.00 0.00 5.19
2088 2250 3.717294 ACGGAGAATGGCGGCCTT 61.717 61.111 21.46 11.55 0.00 4.35
2089 2251 2.363975 ACGGAGAATGGCGGCCTTA 61.364 57.895 21.46 0.00 0.00 2.69
2090 2252 1.153249 CGGAGAATGGCGGCCTTAA 60.153 57.895 21.46 0.00 0.00 1.85
2091 2253 0.535102 CGGAGAATGGCGGCCTTAAT 60.535 55.000 21.46 2.06 0.00 1.40
2092 2254 0.954452 GGAGAATGGCGGCCTTAATG 59.046 55.000 21.46 0.00 0.00 1.90
2093 2255 1.680338 GAGAATGGCGGCCTTAATGT 58.320 50.000 21.46 1.92 0.00 2.71
2094 2256 1.604278 GAGAATGGCGGCCTTAATGTC 59.396 52.381 21.46 8.29 0.00 3.06
2095 2257 0.668535 GAATGGCGGCCTTAATGTCC 59.331 55.000 21.46 0.00 0.00 4.02
2096 2258 1.101049 AATGGCGGCCTTAATGTCCG 61.101 55.000 21.46 8.48 45.46 4.79
2097 2259 2.900337 GGCGGCCTTAATGTCCGG 60.900 66.667 12.87 0.00 43.11 5.14
2098 2260 2.900337 GCGGCCTTAATGTCCGGG 60.900 66.667 0.00 0.00 43.11 5.73
2099 2261 2.904905 CGGCCTTAATGTCCGGGA 59.095 61.111 0.00 0.00 39.52 5.14
2100 2262 1.222387 CGGCCTTAATGTCCGGGAA 59.778 57.895 0.00 0.00 39.52 3.97
2101 2263 0.179029 CGGCCTTAATGTCCGGGAAT 60.179 55.000 0.00 0.00 39.52 3.01
2102 2264 1.318576 GGCCTTAATGTCCGGGAATG 58.681 55.000 0.00 0.00 0.00 2.67
2334 2509 7.500892 ACTTGTTTGTGGATGTGTATTTAGACA 59.499 33.333 0.00 0.00 33.81 3.41
2339 2514 6.716284 TGTGGATGTGTATTTAGACAATGGA 58.284 36.000 0.00 0.00 32.98 3.41
2374 2560 6.299141 TCTATATGAGCCAAAGTGAATTCCC 58.701 40.000 2.27 0.00 0.00 3.97
2398 2584 6.149474 CCGATTTCTTAGTTGTTGATCCAGTT 59.851 38.462 0.00 0.00 0.00 3.16
2401 2587 7.416154 TTTCTTAGTTGTTGATCCAGTTACG 57.584 36.000 0.00 0.00 0.00 3.18
2402 2588 5.475719 TCTTAGTTGTTGATCCAGTTACGG 58.524 41.667 0.00 0.00 0.00 4.02
2479 2673 4.610945 CCGGGCATCAATGTTAAGAATTC 58.389 43.478 0.00 0.00 0.00 2.17
2530 2728 5.950965 GACAATGACCGTGTCTATTACTG 57.049 43.478 5.77 0.00 41.80 2.74
2563 2762 7.201767 CCATTTACAGTTTTTCCAAAATTGCCA 60.202 33.333 4.81 0.00 0.00 4.92
2600 2799 5.959618 AGTTCCTTCCCAATCGTAAAAAG 57.040 39.130 0.00 0.00 0.00 2.27
2657 2906 2.670414 CGCTTCTCTTCACATGTTCTCC 59.330 50.000 0.00 0.00 0.00 3.71
2674 2923 1.273327 CTCCCCAAATTGGCTGACAAC 59.727 52.381 6.48 0.00 42.94 3.32
2682 2933 5.463061 CCAAATTGGCTGACAACAGTTAAAG 59.537 40.000 0.00 0.00 45.04 1.85
2685 2936 6.655078 ATTGGCTGACAACAGTTAAAGATT 57.345 33.333 0.00 0.00 45.04 2.40
2686 2937 7.759489 ATTGGCTGACAACAGTTAAAGATTA 57.241 32.000 0.00 0.00 45.04 1.75
2699 2952 9.878599 ACAGTTAAAGATTATCGAGTTGTTTTG 57.121 29.630 0.00 0.00 0.00 2.44
2774 3027 3.700038 GCTGACTTAGGTAGAGTGGCTAA 59.300 47.826 0.00 0.00 0.00 3.09
2785 3038 3.165875 AGAGTGGCTAAGTCACAGCTTA 58.834 45.455 6.12 0.00 41.04 3.09
2786 3039 3.056465 AGAGTGGCTAAGTCACAGCTTAC 60.056 47.826 6.12 0.00 41.04 2.34
2787 3040 2.632996 AGTGGCTAAGTCACAGCTTACA 59.367 45.455 6.12 0.00 41.04 2.41
2788 3041 2.996621 GTGGCTAAGTCACAGCTTACAG 59.003 50.000 0.00 0.00 38.14 2.74
2789 3042 2.632996 TGGCTAAGTCACAGCTTACAGT 59.367 45.455 0.00 0.00 39.09 3.55
2790 3043 3.830178 TGGCTAAGTCACAGCTTACAGTA 59.170 43.478 0.00 0.00 39.09 2.74
2791 3044 4.466370 TGGCTAAGTCACAGCTTACAGTAT 59.534 41.667 0.00 0.00 39.09 2.12
2792 3045 4.806247 GGCTAAGTCACAGCTTACAGTATG 59.194 45.833 0.00 0.00 39.84 2.39
2793 3046 5.411781 GCTAAGTCACAGCTTACAGTATGT 58.588 41.667 0.00 0.00 43.91 2.29
2821 3074 1.721664 TACTCTGAACCGCCGGATCG 61.722 60.000 11.71 4.43 0.00 3.69
2824 3077 1.105167 TCTGAACCGCCGGATCGTAT 61.105 55.000 11.71 0.00 0.00 3.06
2829 3082 1.371758 CCGCCGGATCGTATGTGAG 60.372 63.158 5.05 0.00 0.00 3.51
2833 3086 0.597637 CCGGATCGTATGTGAGTGGC 60.598 60.000 0.00 0.00 0.00 5.01
2835 3088 0.753262 GGATCGTATGTGAGTGGCCT 59.247 55.000 3.32 0.00 0.00 5.19
2838 3091 3.553096 GGATCGTATGTGAGTGGCCTAAG 60.553 52.174 3.32 0.00 0.00 2.18
2904 3157 1.112916 TCAGACGGCTCACAAGTGGA 61.113 55.000 0.00 0.00 0.00 4.02
2926 3191 0.676184 AGTCAGCTTCAAGTCAGCGA 59.324 50.000 0.00 0.00 42.55 4.93
2954 3219 0.670162 CAAACTGCAACCCCAGTCAG 59.330 55.000 0.00 0.00 44.86 3.51
2955 3220 1.109323 AAACTGCAACCCCAGTCAGC 61.109 55.000 0.00 0.00 44.86 4.26
2956 3221 2.674380 CTGCAACCCCAGTCAGCC 60.674 66.667 0.00 0.00 0.00 4.85
2958 3223 2.203480 GCAACCCCAGTCAGCCAA 60.203 61.111 0.00 0.00 0.00 4.52
2959 3224 1.832167 GCAACCCCAGTCAGCCAAA 60.832 57.895 0.00 0.00 0.00 3.28
2960 3225 2.041153 CAACCCCAGTCAGCCAAAC 58.959 57.895 0.00 0.00 0.00 2.93
2961 3226 0.754957 CAACCCCAGTCAGCCAAACA 60.755 55.000 0.00 0.00 0.00 2.83
2962 3227 0.755327 AACCCCAGTCAGCCAAACAC 60.755 55.000 0.00 0.00 0.00 3.32
2963 3228 2.260869 CCCCAGTCAGCCAAACACG 61.261 63.158 0.00 0.00 0.00 4.49
2964 3229 1.227823 CCCAGTCAGCCAAACACGA 60.228 57.895 0.00 0.00 0.00 4.35
2988 3273 8.059502 CGAAAATGGTTGCAATGAAATGATATG 58.940 33.333 0.59 0.00 0.00 1.78
3014 3304 2.995258 CAGTTTTGAATCGCATTTGGGG 59.005 45.455 0.00 0.00 0.00 4.96
3021 3311 1.570857 ATCGCATTTGGGGGTCTCCA 61.571 55.000 0.00 0.00 37.22 3.86
3036 3326 3.263425 GGTCTCCAATTCAGTACCTCCAA 59.737 47.826 0.00 0.00 0.00 3.53
3047 3337 6.982160 TCAGTACCTCCAACTTACAACTTA 57.018 37.500 0.00 0.00 0.00 2.24
3048 3338 6.752168 TCAGTACCTCCAACTTACAACTTAC 58.248 40.000 0.00 0.00 0.00 2.34
3049 3339 6.552350 TCAGTACCTCCAACTTACAACTTACT 59.448 38.462 0.00 0.00 0.00 2.24
3050 3340 6.867293 CAGTACCTCCAACTTACAACTTACTC 59.133 42.308 0.00 0.00 0.00 2.59
3051 3341 5.224821 ACCTCCAACTTACAACTTACTCC 57.775 43.478 0.00 0.00 0.00 3.85
3052 3342 4.243270 CCTCCAACTTACAACTTACTCCG 58.757 47.826 0.00 0.00 0.00 4.63
3053 3343 4.262335 CCTCCAACTTACAACTTACTCCGT 60.262 45.833 0.00 0.00 0.00 4.69
3164 5012 4.260784 GCTCGAAGAAGAAGAAAACAAGCA 60.261 41.667 0.00 0.00 34.09 3.91
3219 5067 9.765795 ATAGAATTAACAAGTCTAAAGCGCTAT 57.234 29.630 12.05 0.00 40.89 2.97
3281 5494 0.850100 TTTTGGTTCTGGCCTCCTGA 59.150 50.000 3.32 0.00 0.00 3.86
3368 5582 4.202430 CCTGTTAGTTAAGTTCCACCCACT 60.202 45.833 0.00 0.00 0.00 4.00
3418 5632 6.500684 AGTGGTAAAGTTATGTGAGCATTG 57.499 37.500 0.00 0.00 36.58 2.82
3436 5650 3.518634 TTGTGAAGAAAACTTGTGCCC 57.481 42.857 0.00 0.00 0.00 5.36
3549 5767 4.740695 GCATCGTGACATTCTAGTTCTACC 59.259 45.833 0.00 0.00 0.00 3.18
3620 5838 5.075344 ACCCCTAATGAGTTCCCACTTTTTA 59.925 40.000 0.00 0.00 31.22 1.52
3621 5839 6.194967 CCCCTAATGAGTTCCCACTTTTTAT 58.805 40.000 0.00 0.00 31.22 1.40
3691 5909 1.867233 CGTGATAAATCTCAAGGCGGG 59.133 52.381 0.00 0.00 0.00 6.13
3695 5913 0.988832 TAAATCTCAAGGCGGGGTGT 59.011 50.000 0.00 0.00 0.00 4.16
3696 5914 0.112412 AAATCTCAAGGCGGGGTGTT 59.888 50.000 0.00 0.00 0.00 3.32
3697 5915 0.112412 AATCTCAAGGCGGGGTGTTT 59.888 50.000 0.00 0.00 0.00 2.83
3698 5916 0.609131 ATCTCAAGGCGGGGTGTTTG 60.609 55.000 0.00 0.00 0.00 2.93
3699 5917 2.203422 TCAAGGCGGGGTGTTTGG 60.203 61.111 0.00 0.00 0.00 3.28
3700 5918 2.520741 CAAGGCGGGGTGTTTGGT 60.521 61.111 0.00 0.00 0.00 3.67
3701 5919 2.203437 AAGGCGGGGTGTTTGGTC 60.203 61.111 0.00 0.00 0.00 4.02
3702 5920 3.063197 AAGGCGGGGTGTTTGGTCA 62.063 57.895 0.00 0.00 0.00 4.02
3728 5946 5.015515 TGGTCATCACATTTTAGCATGGAA 58.984 37.500 0.00 0.00 0.00 3.53
3737 5955 9.202273 TCACATTTTAGCATGGAAAAATTGTAC 57.798 29.630 0.00 0.00 34.01 2.90
3752 5970 7.665561 AAAATTGTACAATGTAAACATGGCC 57.334 32.000 21.46 0.00 36.56 5.36
3878 7616 6.453943 CAACCAATTCAACACCAATATGTGA 58.546 36.000 0.48 0.00 39.57 3.58
3894 7632 0.523072 GTGAATGAATGCCACACGCT 59.477 50.000 0.00 0.00 38.78 5.07
3910 7650 2.334946 GCTGCGCCCTCAAATCACA 61.335 57.895 4.18 0.00 0.00 3.58
3913 7653 0.810648 TGCGCCCTCAAATCACAATC 59.189 50.000 4.18 0.00 0.00 2.67
3923 7663 4.605968 TCAAATCACAATCCAAACACACG 58.394 39.130 0.00 0.00 0.00 4.49
3981 7729 9.379770 TCCTTCTTTTAATTCCAATTCCTTTCT 57.620 29.630 0.00 0.00 0.00 2.52
3986 7734 9.317936 CTTTTAATTCCAATTCCTTTCTATGCC 57.682 33.333 0.00 0.00 0.00 4.40
3989 7737 4.541250 TCCAATTCCTTTCTATGCCCAT 57.459 40.909 0.00 0.00 0.00 4.00
4001 7749 8.028938 CCTTTCTATGCCCATTTATTTAATCGG 58.971 37.037 0.00 0.00 0.00 4.18
4018 7766 0.825840 CGGGGTCCTCTCTCTCCATC 60.826 65.000 0.00 0.00 0.00 3.51
4037 7785 4.488790 GCACATCCAGCCATAGGG 57.511 61.111 0.00 0.00 37.18 3.53
4038 7786 1.839191 GCACATCCAGCCATAGGGA 59.161 57.895 0.00 0.00 37.64 4.20
4039 7787 0.403271 GCACATCCAGCCATAGGGAT 59.597 55.000 0.00 0.00 44.65 3.85
4049 7797 4.109877 AGCCATAGGGATGAAAATGGAG 57.890 45.455 0.00 0.00 34.73 3.86
4050 7798 3.464833 AGCCATAGGGATGAAAATGGAGT 59.535 43.478 0.00 0.00 34.73 3.85
4051 7799 3.571401 GCCATAGGGATGAAAATGGAGTG 59.429 47.826 0.00 0.00 34.73 3.51
4052 7800 4.147321 CCATAGGGATGAAAATGGAGTGG 58.853 47.826 0.00 0.00 34.73 4.00
4053 7801 4.141181 CCATAGGGATGAAAATGGAGTGGA 60.141 45.833 0.00 0.00 34.73 4.02
4054 7802 5.448654 CATAGGGATGAAAATGGAGTGGAA 58.551 41.667 0.00 0.00 34.73 3.53
4055 7803 4.402616 AGGGATGAAAATGGAGTGGAAA 57.597 40.909 0.00 0.00 0.00 3.13
4056 7804 4.347607 AGGGATGAAAATGGAGTGGAAAG 58.652 43.478 0.00 0.00 0.00 2.62
4057 7805 4.089361 GGGATGAAAATGGAGTGGAAAGT 58.911 43.478 0.00 0.00 0.00 2.66
4058 7806 4.528206 GGGATGAAAATGGAGTGGAAAGTT 59.472 41.667 0.00 0.00 0.00 2.66
4059 7807 5.012046 GGGATGAAAATGGAGTGGAAAGTTT 59.988 40.000 0.00 0.00 0.00 2.66
4060 7808 6.159293 GGATGAAAATGGAGTGGAAAGTTTC 58.841 40.000 7.09 7.09 0.00 2.78
4061 7809 6.015095 GGATGAAAATGGAGTGGAAAGTTTCT 60.015 38.462 15.05 0.00 0.00 2.52
4062 7810 6.147864 TGAAAATGGAGTGGAAAGTTTCTG 57.852 37.500 15.05 0.00 0.00 3.02
4063 7811 4.590850 AAATGGAGTGGAAAGTTTCTGC 57.409 40.909 15.05 8.37 0.00 4.26
4064 7812 3.515602 ATGGAGTGGAAAGTTTCTGCT 57.484 42.857 15.05 12.56 0.00 4.24
4065 7813 3.297134 TGGAGTGGAAAGTTTCTGCTT 57.703 42.857 15.05 0.00 0.00 3.91
4066 7814 3.631250 TGGAGTGGAAAGTTTCTGCTTT 58.369 40.909 15.05 0.00 40.94 3.51
4067 7815 4.023291 TGGAGTGGAAAGTTTCTGCTTTT 58.977 39.130 15.05 0.00 38.64 2.27
4068 7816 4.097892 TGGAGTGGAAAGTTTCTGCTTTTC 59.902 41.667 15.05 5.41 38.64 2.29
4069 7817 4.499865 GGAGTGGAAAGTTTCTGCTTTTCC 60.500 45.833 15.05 7.99 38.64 3.13
4070 7818 3.066760 AGTGGAAAGTTTCTGCTTTTCCG 59.933 43.478 15.05 0.00 38.64 4.30
4071 7819 2.360801 TGGAAAGTTTCTGCTTTTCCGG 59.639 45.455 15.05 0.00 38.64 5.14
4072 7820 2.621526 GGAAAGTTTCTGCTTTTCCGGA 59.378 45.455 15.05 0.00 38.64 5.14
4073 7821 3.304726 GGAAAGTTTCTGCTTTTCCGGAG 60.305 47.826 15.05 0.00 38.64 4.63
4074 7822 2.623416 AAAGTTTCTGCTTTTCCGGAGG 59.377 45.455 3.34 0.05 39.18 4.30
4089 7837 3.907894 CGGAGGAAAAATGAAAACGGA 57.092 42.857 0.00 0.00 0.00 4.69
4090 7838 3.821841 CGGAGGAAAAATGAAAACGGAG 58.178 45.455 0.00 0.00 0.00 4.63
4091 7839 3.500680 CGGAGGAAAAATGAAAACGGAGA 59.499 43.478 0.00 0.00 0.00 3.71
4092 7840 4.378459 CGGAGGAAAAATGAAAACGGAGAG 60.378 45.833 0.00 0.00 0.00 3.20
4093 7841 4.760204 GGAGGAAAAATGAAAACGGAGAGA 59.240 41.667 0.00 0.00 0.00 3.10
4094 7842 5.240844 GGAGGAAAAATGAAAACGGAGAGAA 59.759 40.000 0.00 0.00 0.00 2.87
4095 7843 6.238925 GGAGGAAAAATGAAAACGGAGAGAAA 60.239 38.462 0.00 0.00 0.00 2.52
4096 7844 7.107639 AGGAAAAATGAAAACGGAGAGAAAA 57.892 32.000 0.00 0.00 0.00 2.29
4097 7845 7.726216 AGGAAAAATGAAAACGGAGAGAAAAT 58.274 30.769 0.00 0.00 0.00 1.82
4098 7846 8.856103 AGGAAAAATGAAAACGGAGAGAAAATA 58.144 29.630 0.00 0.00 0.00 1.40
4099 7847 9.639601 GGAAAAATGAAAACGGAGAGAAAATAT 57.360 29.630 0.00 0.00 0.00 1.28
4106 7854 9.624697 TGAAAACGGAGAGAAAATATGAAAATG 57.375 29.630 0.00 0.00 0.00 2.32
4107 7855 9.840427 GAAAACGGAGAGAAAATATGAAAATGA 57.160 29.630 0.00 0.00 0.00 2.57
4111 7859 9.626045 ACGGAGAGAAAATATGAAAATGAAAAC 57.374 29.630 0.00 0.00 0.00 2.43
4112 7860 8.788813 CGGAGAGAAAATATGAAAATGAAAACG 58.211 33.333 0.00 0.00 0.00 3.60
4113 7861 9.840427 GGAGAGAAAATATGAAAATGAAAACGA 57.160 29.630 0.00 0.00 0.00 3.85
4124 7872 8.955061 TGAAAATGAAAACGAAAATTTGCAAA 57.045 23.077 15.44 15.44 30.73 3.68
4125 7873 9.398170 TGAAAATGAAAACGAAAATTTGCAAAA 57.602 22.222 17.19 0.00 30.73 2.44
4126 7874 9.655507 GAAAATGAAAACGAAAATTTGCAAAAC 57.344 25.926 17.19 7.37 30.73 2.43
4127 7875 7.416693 AATGAAAACGAAAATTTGCAAAACG 57.583 28.000 17.19 19.51 30.73 3.60
4128 7876 5.316770 TGAAAACGAAAATTTGCAAAACGG 58.683 33.333 17.19 6.74 0.00 4.44
4129 7877 5.120208 TGAAAACGAAAATTTGCAAAACGGA 59.880 32.000 17.19 0.00 0.00 4.69
4130 7878 5.532025 AAACGAAAATTTGCAAAACGGAA 57.468 30.435 17.19 0.00 0.00 4.30
4131 7879 5.532025 AACGAAAATTTGCAAAACGGAAA 57.468 30.435 17.19 0.00 39.47 3.13
4132 7880 5.726729 ACGAAAATTTGCAAAACGGAAAT 57.273 30.435 17.19 0.00 46.53 2.17
4133 7881 5.497273 ACGAAAATTTGCAAAACGGAAATG 58.503 33.333 17.19 4.44 44.08 2.32
4134 7882 4.903016 CGAAAATTTGCAAAACGGAAATGG 59.097 37.500 17.19 0.00 44.08 3.16
4135 7883 5.277058 CGAAAATTTGCAAAACGGAAATGGA 60.277 36.000 17.19 0.00 44.08 3.41
4136 7884 6.442513 AAAATTTGCAAAACGGAAATGGAA 57.557 29.167 17.19 0.00 44.08 3.53
4137 7885 6.442513 AAATTTGCAAAACGGAAATGGAAA 57.557 29.167 17.19 0.00 44.08 3.13
4138 7886 6.631971 AATTTGCAAAACGGAAATGGAAAT 57.368 29.167 17.19 6.47 44.08 2.17
4139 7887 5.415415 TTTGCAAAACGGAAATGGAAATG 57.585 34.783 10.02 0.00 30.87 2.32
4140 7888 3.397482 TGCAAAACGGAAATGGAAATGG 58.603 40.909 0.00 0.00 0.00 3.16
4141 7889 3.070159 TGCAAAACGGAAATGGAAATGGA 59.930 39.130 0.00 0.00 0.00 3.41
4142 7890 4.061596 GCAAAACGGAAATGGAAATGGAA 58.938 39.130 0.00 0.00 0.00 3.53
4143 7891 4.694982 GCAAAACGGAAATGGAAATGGAAT 59.305 37.500 0.00 0.00 0.00 3.01
4144 7892 5.181056 GCAAAACGGAAATGGAAATGGAATT 59.819 36.000 0.00 0.00 38.98 2.17
4175 7923 5.705813 GGAAACGAAAACAAAAACGGAAT 57.294 34.783 0.00 0.00 0.00 3.01
4176 7924 5.485831 GGAAACGAAAACAAAAACGGAATG 58.514 37.500 0.00 0.00 0.00 2.67
4177 7925 5.288952 GGAAACGAAAACAAAAACGGAATGA 59.711 36.000 0.00 0.00 0.00 2.57
4178 7926 6.019398 GGAAACGAAAACAAAAACGGAATGAT 60.019 34.615 0.00 0.00 0.00 2.45
4179 7927 5.881637 ACGAAAACAAAAACGGAATGATG 57.118 34.783 0.00 0.00 0.00 3.07
4180 7928 5.344884 ACGAAAACAAAAACGGAATGATGT 58.655 33.333 0.00 0.00 0.00 3.06
4181 7929 5.808030 ACGAAAACAAAAACGGAATGATGTT 59.192 32.000 0.00 0.00 32.78 2.71
4182 7930 6.311690 ACGAAAACAAAAACGGAATGATGTTT 59.688 30.769 0.00 0.00 41.30 2.83
4185 7933 6.597262 AACAAAAACGGAATGATGTTTTCC 57.403 33.333 3.84 0.00 44.92 3.13
4190 7938 2.939460 GGAATGATGTTTTCCGGTGG 57.061 50.000 0.00 0.00 33.79 4.61
4191 7939 2.442413 GGAATGATGTTTTCCGGTGGA 58.558 47.619 0.00 0.00 33.79 4.02
4192 7940 2.823154 GGAATGATGTTTTCCGGTGGAA 59.177 45.455 0.00 0.00 40.27 3.53
4193 7941 3.366985 GGAATGATGTTTTCCGGTGGAAC 60.367 47.826 0.00 5.88 41.87 3.62
4194 7942 2.350057 TGATGTTTTCCGGTGGAACA 57.650 45.000 17.58 17.58 41.87 3.18
4195 7943 7.782501 GGAATGATGTTTTCCGGTGGAACAC 62.783 48.000 17.61 7.71 45.02 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 75 0.031994 ATGCACTCACGGGTTTTTGC 59.968 50.000 0.00 0.00 0.00 3.68
89 94 7.225145 CAGAATTTTTCCTTTTTGAGATGTGCA 59.775 33.333 0.00 0.00 0.00 4.57
549 587 6.583562 AGCACTGAATCCAACCTAATAGTAC 58.416 40.000 0.00 0.00 0.00 2.73
550 588 6.808321 AGCACTGAATCCAACCTAATAGTA 57.192 37.500 0.00 0.00 0.00 1.82
551 589 5.700402 AGCACTGAATCCAACCTAATAGT 57.300 39.130 0.00 0.00 0.00 2.12
552 590 7.173907 CCATTAGCACTGAATCCAACCTAATAG 59.826 40.741 0.00 0.00 0.00 1.73
553 591 6.998074 CCATTAGCACTGAATCCAACCTAATA 59.002 38.462 0.00 0.00 0.00 0.98
554 592 5.829924 CCATTAGCACTGAATCCAACCTAAT 59.170 40.000 0.00 0.00 0.00 1.73
555 593 5.045213 TCCATTAGCACTGAATCCAACCTAA 60.045 40.000 0.00 0.00 0.00 2.69
556 594 4.473196 TCCATTAGCACTGAATCCAACCTA 59.527 41.667 0.00 0.00 0.00 3.08
557 595 3.266772 TCCATTAGCACTGAATCCAACCT 59.733 43.478 0.00 0.00 0.00 3.50
558 596 3.378427 GTCCATTAGCACTGAATCCAACC 59.622 47.826 0.00 0.00 0.00 3.77
559 597 3.378427 GGTCCATTAGCACTGAATCCAAC 59.622 47.826 0.00 0.00 0.00 3.77
560 598 3.620488 GGTCCATTAGCACTGAATCCAA 58.380 45.455 0.00 0.00 0.00 3.53
561 599 2.419990 CGGTCCATTAGCACTGAATCCA 60.420 50.000 0.00 0.00 0.00 3.41
562 600 2.158957 TCGGTCCATTAGCACTGAATCC 60.159 50.000 0.00 0.00 0.00 3.01
563 601 3.179443 TCGGTCCATTAGCACTGAATC 57.821 47.619 0.00 0.00 0.00 2.52
564 602 3.535561 CTTCGGTCCATTAGCACTGAAT 58.464 45.455 0.00 0.00 37.29 2.57
565 603 2.935238 GCTTCGGTCCATTAGCACTGAA 60.935 50.000 2.79 0.00 35.87 3.02
566 604 1.405526 GCTTCGGTCCATTAGCACTGA 60.406 52.381 2.79 0.00 33.88 3.41
567 605 1.009829 GCTTCGGTCCATTAGCACTG 58.990 55.000 2.79 0.00 33.88 3.66
568 606 0.905357 AGCTTCGGTCCATTAGCACT 59.095 50.000 8.95 0.00 36.11 4.40
569 607 2.474816 CTAGCTTCGGTCCATTAGCAC 58.525 52.381 0.00 0.00 36.11 4.40
570 608 1.412710 CCTAGCTTCGGTCCATTAGCA 59.587 52.381 0.00 0.00 36.11 3.49
571 609 1.413077 ACCTAGCTTCGGTCCATTAGC 59.587 52.381 0.00 0.00 0.00 3.09
572 610 4.931661 TTACCTAGCTTCGGTCCATTAG 57.068 45.455 10.33 0.00 35.98 1.73
573 611 4.713321 ACTTTACCTAGCTTCGGTCCATTA 59.287 41.667 10.33 0.00 35.98 1.90
574 612 3.518303 ACTTTACCTAGCTTCGGTCCATT 59.482 43.478 10.33 0.00 35.98 3.16
575 613 3.105283 ACTTTACCTAGCTTCGGTCCAT 58.895 45.455 10.33 0.00 35.98 3.41
576 614 2.532843 ACTTTACCTAGCTTCGGTCCA 58.467 47.619 10.33 0.00 35.98 4.02
577 615 4.082026 TGTTACTTTACCTAGCTTCGGTCC 60.082 45.833 10.33 0.00 35.98 4.46
578 616 5.064441 TGTTACTTTACCTAGCTTCGGTC 57.936 43.478 10.33 0.00 35.98 4.79
579 617 5.421374 AGATGTTACTTTACCTAGCTTCGGT 59.579 40.000 11.56 11.56 38.55 4.69
580 618 5.903810 AGATGTTACTTTACCTAGCTTCGG 58.096 41.667 0.00 0.00 0.00 4.30
581 619 7.829378 AAAGATGTTACTTTACCTAGCTTCG 57.171 36.000 0.00 0.00 38.16 3.79
582 620 9.000486 ACAAAAGATGTTACTTTACCTAGCTTC 58.000 33.333 0.00 0.00 40.06 3.86
583 621 8.919777 ACAAAAGATGTTACTTTACCTAGCTT 57.080 30.769 0.00 0.00 40.06 3.74
598 636 3.068590 CAGCCCAGTGAAACAAAAGATGT 59.931 43.478 0.00 0.00 46.82 3.06
599 637 3.553508 CCAGCCCAGTGAAACAAAAGATG 60.554 47.826 0.00 0.00 41.43 2.90
600 638 2.629617 CCAGCCCAGTGAAACAAAAGAT 59.370 45.455 0.00 0.00 41.43 2.40
601 639 2.031120 CCAGCCCAGTGAAACAAAAGA 58.969 47.619 0.00 0.00 41.43 2.52
602 640 1.756538 ACCAGCCCAGTGAAACAAAAG 59.243 47.619 0.00 0.00 41.43 2.27
603 641 1.754226 GACCAGCCCAGTGAAACAAAA 59.246 47.619 0.00 0.00 41.43 2.44
604 642 1.064017 AGACCAGCCCAGTGAAACAAA 60.064 47.619 0.00 0.00 41.43 2.83
605 643 0.550914 AGACCAGCCCAGTGAAACAA 59.449 50.000 0.00 0.00 41.43 2.83
606 644 0.179020 CAGACCAGCCCAGTGAAACA 60.179 55.000 0.00 0.00 41.43 2.83
607 645 1.518903 GCAGACCAGCCCAGTGAAAC 61.519 60.000 0.00 0.00 0.00 2.78
608 646 1.228245 GCAGACCAGCCCAGTGAAA 60.228 57.895 0.00 0.00 0.00 2.69
609 647 2.431683 GCAGACCAGCCCAGTGAA 59.568 61.111 0.00 0.00 0.00 3.18
610 648 4.007644 CGCAGACCAGCCCAGTGA 62.008 66.667 0.00 0.00 0.00 3.41
613 651 2.463589 TTTACCGCAGACCAGCCCAG 62.464 60.000 0.00 0.00 0.00 4.45
614 652 2.058125 TTTTACCGCAGACCAGCCCA 62.058 55.000 0.00 0.00 0.00 5.36
615 653 1.302993 TTTTACCGCAGACCAGCCC 60.303 57.895 0.00 0.00 0.00 5.19
616 654 1.873863 GTTTTACCGCAGACCAGCC 59.126 57.895 0.00 0.00 0.00 4.85
617 655 1.495951 CGTTTTACCGCAGACCAGC 59.504 57.895 0.00 0.00 0.00 4.85
635 673 7.927974 GTCTATTGACCACGGCATTTGATGC 62.928 48.000 4.37 4.37 44.87 3.91
636 674 2.945447 ATTGACCACGGCATTTGATG 57.055 45.000 0.00 0.00 0.00 3.07
637 675 3.627577 GTCTATTGACCACGGCATTTGAT 59.372 43.478 0.00 0.00 37.24 2.57
638 676 3.006940 GTCTATTGACCACGGCATTTGA 58.993 45.455 0.00 0.00 37.24 2.69
639 677 2.746904 TGTCTATTGACCACGGCATTTG 59.253 45.455 4.82 0.00 42.28 2.32
640 678 3.066291 TGTCTATTGACCACGGCATTT 57.934 42.857 4.82 0.00 42.28 2.32
641 679 2.779755 TGTCTATTGACCACGGCATT 57.220 45.000 4.82 0.00 42.28 3.56
642 680 2.170397 TGATGTCTATTGACCACGGCAT 59.830 45.455 4.82 0.00 42.28 4.40
643 681 1.552792 TGATGTCTATTGACCACGGCA 59.447 47.619 4.82 0.00 42.28 5.69
644 682 1.933853 GTGATGTCTATTGACCACGGC 59.066 52.381 4.82 0.00 42.28 5.68
645 683 2.193447 CGTGATGTCTATTGACCACGG 58.807 52.381 21.81 10.34 42.23 4.94
647 685 2.852413 CGACGTGATGTCTATTGACCAC 59.148 50.000 4.82 5.87 45.87 4.16
648 686 2.159296 CCGACGTGATGTCTATTGACCA 60.159 50.000 4.82 0.00 45.87 4.02
649 687 2.460918 CCGACGTGATGTCTATTGACC 58.539 52.381 4.82 0.00 45.87 4.02
650 688 2.460918 CCCGACGTGATGTCTATTGAC 58.539 52.381 0.00 0.00 45.87 3.18
651 689 1.407618 CCCCGACGTGATGTCTATTGA 59.592 52.381 0.00 0.00 45.87 2.57
652 690 1.538204 CCCCCGACGTGATGTCTATTG 60.538 57.143 0.00 0.00 45.87 1.90
653 691 0.750850 CCCCCGACGTGATGTCTATT 59.249 55.000 0.00 0.00 45.87 1.73
654 692 0.396695 ACCCCCGACGTGATGTCTAT 60.397 55.000 0.00 0.00 45.87 1.98
655 693 1.000521 ACCCCCGACGTGATGTCTA 60.001 57.895 0.00 0.00 45.87 2.59
656 694 2.283676 ACCCCCGACGTGATGTCT 60.284 61.111 0.00 0.00 45.87 3.41
657 695 2.125673 CACCCCCGACGTGATGTC 60.126 66.667 0.00 0.00 44.53 3.06
658 696 2.920912 ACACCCCCGACGTGATGT 60.921 61.111 0.00 0.00 35.17 3.06
659 697 2.434185 CACACCCCCGACGTGATG 60.434 66.667 0.00 0.00 35.17 3.07
660 698 4.388499 GCACACCCCCGACGTGAT 62.388 66.667 0.00 0.00 35.17 3.06
676 714 2.256461 CAAACGAGGCAGCAAGGC 59.744 61.111 0.00 0.00 44.61 4.35
677 715 1.283793 CACAAACGAGGCAGCAAGG 59.716 57.895 0.00 0.00 0.00 3.61
678 716 1.165907 TCCACAAACGAGGCAGCAAG 61.166 55.000 0.00 0.00 0.00 4.01
679 717 1.153066 TCCACAAACGAGGCAGCAA 60.153 52.632 0.00 0.00 0.00 3.91
680 718 1.891919 GTCCACAAACGAGGCAGCA 60.892 57.895 0.00 0.00 0.00 4.41
681 719 1.569479 GAGTCCACAAACGAGGCAGC 61.569 60.000 0.00 0.00 0.00 5.25
682 720 1.284982 CGAGTCCACAAACGAGGCAG 61.285 60.000 0.00 0.00 0.00 4.85
683 721 1.300620 CGAGTCCACAAACGAGGCA 60.301 57.895 0.00 0.00 0.00 4.75
684 722 0.389948 ATCGAGTCCACAAACGAGGC 60.390 55.000 0.00 0.00 38.12 4.70
685 723 1.726791 CAATCGAGTCCACAAACGAGG 59.273 52.381 0.00 0.00 38.12 4.63
686 724 1.126846 GCAATCGAGTCCACAAACGAG 59.873 52.381 0.00 0.00 38.12 4.18
687 725 1.144969 GCAATCGAGTCCACAAACGA 58.855 50.000 0.00 0.00 39.01 3.85
688 726 0.179250 CGCAATCGAGTCCACAAACG 60.179 55.000 0.00 0.00 38.10 3.60
689 727 0.452784 GCGCAATCGAGTCCACAAAC 60.453 55.000 0.30 0.00 38.10 2.93
690 728 0.602638 AGCGCAATCGAGTCCACAAA 60.603 50.000 11.47 0.00 38.10 2.83
691 729 1.005037 AGCGCAATCGAGTCCACAA 60.005 52.632 11.47 0.00 38.10 3.33
692 730 1.446099 GAGCGCAATCGAGTCCACA 60.446 57.895 11.47 0.00 38.10 4.17
693 731 2.167861 GGAGCGCAATCGAGTCCAC 61.168 63.158 11.47 0.00 39.08 4.02
694 732 1.035385 TAGGAGCGCAATCGAGTCCA 61.035 55.000 11.47 0.00 40.68 4.02
695 733 0.318275 CTAGGAGCGCAATCGAGTCC 60.318 60.000 11.47 5.71 39.36 3.85
696 734 0.937231 GCTAGGAGCGCAATCGAGTC 60.937 60.000 11.47 0.00 38.10 3.36
697 735 1.066587 GCTAGGAGCGCAATCGAGT 59.933 57.895 11.47 0.00 38.10 4.18
698 736 1.663074 GGCTAGGAGCGCAATCGAG 60.663 63.158 11.47 5.29 43.62 4.04
699 737 0.822121 TAGGCTAGGAGCGCAATCGA 60.822 55.000 11.47 0.00 43.62 3.59
700 738 0.387878 CTAGGCTAGGAGCGCAATCG 60.388 60.000 11.47 0.00 43.62 3.34
701 739 0.669012 GCTAGGCTAGGAGCGCAATC 60.669 60.000 22.40 0.00 43.62 2.67
702 740 1.369321 GCTAGGCTAGGAGCGCAAT 59.631 57.895 22.40 0.00 43.62 3.56
703 741 2.021068 CTGCTAGGCTAGGAGCGCAA 62.021 60.000 26.87 0.00 43.62 4.85
704 742 2.442087 TGCTAGGCTAGGAGCGCA 60.442 61.111 22.40 12.07 43.62 6.09
705 743 2.338257 CTGCTAGGCTAGGAGCGC 59.662 66.667 26.87 12.34 43.62 5.92
716 754 2.230992 CCTACTGATGCCTAGCTGCTAG 59.769 54.545 26.08 26.08 34.16 3.42
717 755 2.158460 TCCTACTGATGCCTAGCTGCTA 60.158 50.000 9.34 9.34 0.00 3.49
718 756 1.047002 CCTACTGATGCCTAGCTGCT 58.953 55.000 7.57 7.57 0.00 4.24
719 757 1.000731 CTCCTACTGATGCCTAGCTGC 59.999 57.143 0.00 0.00 0.00 5.25
832 874 2.256461 GCGCAAGTGGGAAAGCTG 59.744 61.111 0.30 0.00 41.68 4.24
845 887 2.351244 CCAGACCAGAGTAGGCGCA 61.351 63.158 10.83 0.00 0.00 6.09
847 889 1.115467 AATCCAGACCAGAGTAGGCG 58.885 55.000 0.00 0.00 0.00 5.52
850 892 1.833630 TGCCAATCCAGACCAGAGTAG 59.166 52.381 0.00 0.00 0.00 2.57
852 894 1.004044 CTTGCCAATCCAGACCAGAGT 59.996 52.381 0.00 0.00 0.00 3.24
853 895 1.747709 CTTGCCAATCCAGACCAGAG 58.252 55.000 0.00 0.00 0.00 3.35
854 896 0.322816 GCTTGCCAATCCAGACCAGA 60.323 55.000 0.00 0.00 0.00 3.86
856 898 0.040058 ATGCTTGCCAATCCAGACCA 59.960 50.000 0.00 0.00 0.00 4.02
857 899 0.458669 CATGCTTGCCAATCCAGACC 59.541 55.000 0.00 0.00 0.00 3.85
858 900 0.458669 CCATGCTTGCCAATCCAGAC 59.541 55.000 0.00 0.00 0.00 3.51
901 961 2.838467 CCATGGGGCTGGGGAGATC 61.838 68.421 2.85 0.00 32.28 2.75
924 984 3.263425 GGTGGAGGAGAGTTTATGTGGAA 59.737 47.826 0.00 0.00 0.00 3.53
1065 1163 4.498520 AGCATGTCGTCGCCGAGG 62.499 66.667 0.00 0.00 45.26 4.63
1387 1504 1.069765 CGAACACCACCAGCTGACT 59.930 57.895 17.39 0.00 0.00 3.41
1449 1572 2.105128 GAGTCGCGGGAGATGTGG 59.895 66.667 6.13 0.00 0.00 4.17
1462 1585 0.107945 AGGAAGCAATGGAGCGAGTC 60.108 55.000 0.00 0.00 40.15 3.36
1502 1631 0.178990 GAGCACACTGAAGGGGGTTT 60.179 55.000 0.00 0.00 0.00 3.27
1507 1636 1.197430 AGGGAGAGCACACTGAAGGG 61.197 60.000 0.00 0.00 0.00 3.95
1681 1822 2.363680 CGGTGAGCTGATCTCCTGTAAT 59.636 50.000 11.67 0.00 41.18 1.89
1746 1887 2.505407 TGGCTCATAGTGCAGGTTATGT 59.495 45.455 10.78 0.00 0.00 2.29
1747 1888 3.198409 TGGCTCATAGTGCAGGTTATG 57.802 47.619 0.00 0.00 0.00 1.90
1785 1932 2.035237 TTGTGCCGTCCTCCGTTTCT 62.035 55.000 0.00 0.00 33.66 2.52
1830 1986 1.227380 CCATACCTGCAGGACGAGC 60.227 63.158 39.19 0.00 38.94 5.03
1981 2140 1.271840 TAGTGGAGCCCGCCATTCTT 61.272 55.000 0.00 0.00 40.68 2.52
1992 2151 2.199236 CGAAACCCGTAATAGTGGAGC 58.801 52.381 0.00 0.00 0.00 4.70
2004 2163 1.866925 GTTCTTCAGGCGAAACCCG 59.133 57.895 0.00 0.00 40.58 5.28
2006 2165 1.206831 GCGTTCTTCAGGCGAAACC 59.793 57.895 0.00 0.00 39.61 3.27
2007 2166 1.206831 GGCGTTCTTCAGGCGAAAC 59.793 57.895 0.00 0.00 37.13 2.78
2016 2175 2.125633 GGTCGGAGGGCGTTCTTC 60.126 66.667 0.00 0.00 0.00 2.87
2031 2193 2.671070 CGTGCCCATTCTCCTGGT 59.329 61.111 0.00 0.00 34.23 4.00
2037 2199 1.153369 CATCGTCCGTGCCCATTCT 60.153 57.895 0.00 0.00 0.00 2.40
2038 2200 2.180204 CCATCGTCCGTGCCCATTC 61.180 63.158 0.00 0.00 0.00 2.67
2039 2201 2.124736 CCATCGTCCGTGCCCATT 60.125 61.111 0.00 0.00 0.00 3.16
2040 2202 4.856801 GCCATCGTCCGTGCCCAT 62.857 66.667 0.00 0.00 0.00 4.00
2045 2207 3.989698 AAGAGCGCCATCGTCCGTG 62.990 63.158 2.29 0.00 38.14 4.94
2046 2208 3.701604 GAAGAGCGCCATCGTCCGT 62.702 63.158 2.29 0.00 38.14 4.69
2047 2209 2.956964 GAAGAGCGCCATCGTCCG 60.957 66.667 2.29 0.00 38.14 4.79
2048 2210 1.227380 ATGAAGAGCGCCATCGTCC 60.227 57.895 2.29 0.00 38.14 4.79
2049 2211 1.493950 CCATGAAGAGCGCCATCGTC 61.494 60.000 2.29 4.54 38.14 4.20
2050 2212 1.522355 CCATGAAGAGCGCCATCGT 60.522 57.895 2.29 0.00 38.14 3.73
2051 2213 2.249535 CCCATGAAGAGCGCCATCG 61.250 63.158 2.29 0.00 39.07 3.84
2052 2214 2.550101 GCCCATGAAGAGCGCCATC 61.550 63.158 2.29 0.00 0.00 3.51
2053 2215 2.517875 GCCCATGAAGAGCGCCAT 60.518 61.111 2.29 0.00 0.00 4.40
2054 2216 4.032452 TGCCCATGAAGAGCGCCA 62.032 61.111 2.29 0.00 0.00 5.69
2055 2217 3.512516 GTGCCCATGAAGAGCGCC 61.513 66.667 2.29 0.00 0.00 6.53
2056 2218 3.869272 CGTGCCCATGAAGAGCGC 61.869 66.667 0.00 0.00 0.00 5.92
2057 2219 3.197790 CCGTGCCCATGAAGAGCG 61.198 66.667 0.00 0.00 0.00 5.03
2058 2220 1.817099 CTCCGTGCCCATGAAGAGC 60.817 63.158 0.00 0.00 0.00 4.09
2059 2221 0.250234 TTCTCCGTGCCCATGAAGAG 59.750 55.000 0.00 0.00 0.00 2.85
2060 2222 0.911769 ATTCTCCGTGCCCATGAAGA 59.088 50.000 0.00 0.00 0.00 2.87
2061 2223 1.019673 CATTCTCCGTGCCCATGAAG 58.980 55.000 0.00 0.00 0.00 3.02
2062 2224 0.394216 CCATTCTCCGTGCCCATGAA 60.394 55.000 0.00 0.00 0.00 2.57
2063 2225 1.224315 CCATTCTCCGTGCCCATGA 59.776 57.895 0.00 0.00 0.00 3.07
2064 2226 2.484062 GCCATTCTCCGTGCCCATG 61.484 63.158 0.00 0.00 0.00 3.66
2065 2227 2.124151 GCCATTCTCCGTGCCCAT 60.124 61.111 0.00 0.00 0.00 4.00
2066 2228 4.776322 CGCCATTCTCCGTGCCCA 62.776 66.667 0.00 0.00 0.00 5.36
2070 2232 2.587322 TAAGGCCGCCATTCTCCGTG 62.587 60.000 13.15 0.00 0.00 4.94
2071 2233 1.906105 TTAAGGCCGCCATTCTCCGT 61.906 55.000 13.15 0.00 0.00 4.69
2072 2234 0.535102 ATTAAGGCCGCCATTCTCCG 60.535 55.000 13.15 0.00 0.00 4.63
2073 2235 0.954452 CATTAAGGCCGCCATTCTCC 59.046 55.000 13.15 0.00 0.00 3.71
2074 2236 1.604278 GACATTAAGGCCGCCATTCTC 59.396 52.381 13.15 0.00 0.00 2.87
2075 2237 1.680338 GACATTAAGGCCGCCATTCT 58.320 50.000 13.15 0.00 0.00 2.40
2076 2238 0.668535 GGACATTAAGGCCGCCATTC 59.331 55.000 13.15 0.00 34.00 2.67
2077 2239 2.807247 GGACATTAAGGCCGCCATT 58.193 52.632 13.15 5.79 34.00 3.16
2078 2240 4.579127 GGACATTAAGGCCGCCAT 57.421 55.556 13.15 1.26 34.00 4.40
2083 2245 1.318576 CATTCCCGGACATTAAGGCC 58.681 55.000 0.73 0.00 44.64 5.19
2084 2246 0.668535 GCATTCCCGGACATTAAGGC 59.331 55.000 0.73 0.00 0.00 4.35
2085 2247 1.676006 GTGCATTCCCGGACATTAAGG 59.324 52.381 0.73 0.00 0.00 2.69
2086 2248 1.676006 GGTGCATTCCCGGACATTAAG 59.324 52.381 0.73 0.00 0.00 1.85
2087 2249 1.004862 TGGTGCATTCCCGGACATTAA 59.995 47.619 0.73 0.00 0.00 1.40
2088 2250 0.621082 TGGTGCATTCCCGGACATTA 59.379 50.000 0.73 0.00 0.00 1.90
2089 2251 0.965363 GTGGTGCATTCCCGGACATT 60.965 55.000 0.73 0.00 0.00 2.71
2090 2252 1.378514 GTGGTGCATTCCCGGACAT 60.379 57.895 0.73 0.00 0.00 3.06
2091 2253 2.033448 GTGGTGCATTCCCGGACA 59.967 61.111 0.73 0.00 0.00 4.02
2092 2254 2.750237 GGTGGTGCATTCCCGGAC 60.750 66.667 0.73 0.00 0.00 4.79
2093 2255 3.253061 TGGTGGTGCATTCCCGGA 61.253 61.111 0.73 0.00 0.00 5.14
2094 2256 2.751436 CTGGTGGTGCATTCCCGG 60.751 66.667 0.00 0.00 0.00 5.73
2095 2257 2.751436 CCTGGTGGTGCATTCCCG 60.751 66.667 0.00 0.00 0.00 5.14
2096 2258 3.070576 GCCTGGTGGTGCATTCCC 61.071 66.667 0.00 0.00 35.27 3.97
2097 2259 3.070576 GGCCTGGTGGTGCATTCC 61.071 66.667 0.00 0.00 35.27 3.01
2098 2260 3.070576 GGGCCTGGTGGTGCATTC 61.071 66.667 0.84 0.00 35.27 2.67
2334 2509 9.722184 GCTCATATAGATGCATATACATCCATT 57.278 33.333 11.62 1.41 46.29 3.16
2339 2514 9.557061 CTTTGGCTCATATAGATGCATATACAT 57.443 33.333 2.53 0.00 32.62 2.29
2350 2525 6.299141 GGGAATTCACTTTGGCTCATATAGA 58.701 40.000 7.93 0.00 0.00 1.98
2374 2560 6.727824 ACTGGATCAACAACTAAGAAATCG 57.272 37.500 0.00 0.00 0.00 3.34
2398 2584 7.148306 GCCACTTTTCTGAAATTTAGATCCGTA 60.148 37.037 3.31 0.00 0.00 4.02
2401 2587 7.163001 AGCCACTTTTCTGAAATTTAGATCC 57.837 36.000 3.31 0.00 0.00 3.36
2402 2588 9.167311 TCTAGCCACTTTTCTGAAATTTAGATC 57.833 33.333 3.31 0.00 0.00 2.75
2479 2673 7.849804 AGGCAACAGAAACTACATTGTATAG 57.150 36.000 0.00 0.00 41.41 1.31
2563 2762 4.152284 AGGAACTTTCGTCCTTCAGTTT 57.848 40.909 0.00 0.00 27.25 2.66
2582 2781 5.935789 TGAGTACTTTTTACGATTGGGAAGG 59.064 40.000 0.00 0.00 0.00 3.46
2600 2799 4.884164 ACCGTACTAGTGGGTAATGAGTAC 59.116 45.833 16.34 0.00 39.28 2.73
2657 2906 1.688197 ACTGTTGTCAGCCAATTTGGG 59.312 47.619 17.03 1.62 44.77 4.12
2674 2923 9.329913 CCAAAACAACTCGATAATCTTTAACTG 57.670 33.333 0.00 0.00 0.00 3.16
2682 2933 4.156008 AGTGGCCAAAACAACTCGATAATC 59.844 41.667 7.24 0.00 0.00 1.75
2685 2936 2.811431 CAGTGGCCAAAACAACTCGATA 59.189 45.455 7.24 0.00 0.00 2.92
2686 2937 1.608590 CAGTGGCCAAAACAACTCGAT 59.391 47.619 7.24 0.00 0.00 3.59
2699 2952 0.391793 GCTCTACCTTGACAGTGGCC 60.392 60.000 0.00 0.00 0.00 5.36
2762 3015 2.494073 AGCTGTGACTTAGCCACTCTAC 59.506 50.000 0.00 0.00 42.07 2.59
2785 3038 4.081972 CAGAGTAGCCAAGTCACATACTGT 60.082 45.833 0.00 0.00 38.88 3.55
2786 3039 4.158579 TCAGAGTAGCCAAGTCACATACTG 59.841 45.833 0.00 0.00 38.88 2.74
2787 3040 4.344978 TCAGAGTAGCCAAGTCACATACT 58.655 43.478 0.00 0.00 41.49 2.12
2788 3041 4.720649 TCAGAGTAGCCAAGTCACATAC 57.279 45.455 0.00 0.00 0.00 2.39
2789 3042 4.081642 GGTTCAGAGTAGCCAAGTCACATA 60.082 45.833 0.00 0.00 0.00 2.29
2790 3043 3.307059 GGTTCAGAGTAGCCAAGTCACAT 60.307 47.826 0.00 0.00 0.00 3.21
2791 3044 2.037251 GGTTCAGAGTAGCCAAGTCACA 59.963 50.000 0.00 0.00 0.00 3.58
2792 3045 2.689646 GGTTCAGAGTAGCCAAGTCAC 58.310 52.381 0.00 0.00 0.00 3.67
2793 3046 1.272490 CGGTTCAGAGTAGCCAAGTCA 59.728 52.381 0.00 0.00 0.00 3.41
2797 3050 1.295423 GGCGGTTCAGAGTAGCCAA 59.705 57.895 7.11 0.00 46.48 4.52
2799 3052 2.202756 CGGCGGTTCAGAGTAGCC 60.203 66.667 0.00 2.89 44.00 3.93
2802 3055 1.721664 CGATCCGGCGGTTCAGAGTA 61.722 60.000 30.12 9.80 0.00 2.59
2821 3074 3.887621 TGACTTAGGCCACTCACATAC 57.112 47.619 5.01 0.00 0.00 2.39
2824 3077 3.072330 TGAAATGACTTAGGCCACTCACA 59.928 43.478 5.01 0.00 0.00 3.58
2829 3082 3.412386 ACAGTGAAATGACTTAGGCCAC 58.588 45.455 5.01 0.00 0.00 5.01
2864 3117 4.935205 TGATTTCAAATCAACGACTCGGAT 59.065 37.500 10.55 0.00 0.00 4.18
2867 3120 5.308927 GTCTGATTTCAAATCAACGACTCG 58.691 41.667 18.71 6.23 0.00 4.18
2904 3157 2.216898 GCTGACTTGAAGCTGACTTGT 58.783 47.619 0.00 0.00 35.82 3.16
2926 3191 1.532794 TTGCAGTTTGCCGGGGATT 60.533 52.632 2.18 0.00 44.23 3.01
2947 3212 1.021202 TTTCGTGTTTGGCTGACTGG 58.979 50.000 0.00 0.00 0.00 4.00
2954 3219 1.260297 GCAACCATTTTCGTGTTTGGC 59.740 47.619 0.00 0.00 32.26 4.52
2955 3220 2.544685 TGCAACCATTTTCGTGTTTGG 58.455 42.857 0.00 0.00 35.31 3.28
2956 3221 4.269603 TCATTGCAACCATTTTCGTGTTTG 59.730 37.500 0.00 0.00 0.00 2.93
2958 3223 4.052159 TCATTGCAACCATTTTCGTGTT 57.948 36.364 0.00 0.00 0.00 3.32
2959 3224 3.724508 TCATTGCAACCATTTTCGTGT 57.275 38.095 0.00 0.00 0.00 4.49
2960 3225 5.177142 TCATTTCATTGCAACCATTTTCGTG 59.823 36.000 0.00 0.00 0.00 4.35
2961 3226 5.295950 TCATTTCATTGCAACCATTTTCGT 58.704 33.333 0.00 0.00 0.00 3.85
2962 3227 5.842619 TCATTTCATTGCAACCATTTTCG 57.157 34.783 0.00 0.00 0.00 3.46
2963 3228 8.885722 ACATATCATTTCATTGCAACCATTTTC 58.114 29.630 0.00 0.00 0.00 2.29
2964 3229 8.795842 ACATATCATTTCATTGCAACCATTTT 57.204 26.923 0.00 0.00 0.00 1.82
2988 3273 2.132740 TGCGATTCAAAACTGCCAAC 57.867 45.000 0.00 0.00 0.00 3.77
3014 3304 2.838202 TGGAGGTACTGAATTGGAGACC 59.162 50.000 0.00 0.00 41.55 3.85
3021 3311 6.838382 AGTTGTAAGTTGGAGGTACTGAATT 58.162 36.000 0.00 0.00 41.55 2.17
3048 3338 8.970691 ATCAAAAGACAAAATCAAATACGGAG 57.029 30.769 0.00 0.00 0.00 4.63
3164 5012 3.693807 TGCCAGCTTCTTGATCTTTCAT 58.306 40.909 0.00 0.00 0.00 2.57
3193 5041 9.765795 ATAGCGCTTTAGACTTGTTAATTCTAT 57.234 29.630 18.68 0.00 0.00 1.98
3194 5042 9.031360 CATAGCGCTTTAGACTTGTTAATTCTA 57.969 33.333 18.68 0.00 0.00 2.10
3281 5494 5.123227 TCAACTAACTTAGCAGTGCAAACT 58.877 37.500 19.20 0.00 31.60 2.66
3418 5632 3.518634 TTGGGCACAAGTTTTCTTCAC 57.481 42.857 0.00 0.00 38.17 3.18
3436 5650 7.703621 CAGCTTGGGAAACATAAGACATAATTG 59.296 37.037 0.00 0.00 0.00 2.32
3574 5792 2.833794 CACGAGAGTTTGTTTCTCCCA 58.166 47.619 0.00 0.00 46.40 4.37
3691 5909 3.320541 TGATGACCAAATGACCAAACACC 59.679 43.478 0.00 0.00 0.00 4.16
3695 5913 5.804944 AATGTGATGACCAAATGACCAAA 57.195 34.783 0.00 0.00 0.00 3.28
3696 5914 5.804944 AAATGTGATGACCAAATGACCAA 57.195 34.783 0.00 0.00 0.00 3.67
3697 5915 5.804944 AAAATGTGATGACCAAATGACCA 57.195 34.783 0.00 0.00 0.00 4.02
3698 5916 5.807011 GCTAAAATGTGATGACCAAATGACC 59.193 40.000 0.00 0.00 0.00 4.02
3699 5917 6.389091 TGCTAAAATGTGATGACCAAATGAC 58.611 36.000 0.00 0.00 0.00 3.06
3700 5918 6.587206 TGCTAAAATGTGATGACCAAATGA 57.413 33.333 0.00 0.00 0.00 2.57
3701 5919 6.256975 CCATGCTAAAATGTGATGACCAAATG 59.743 38.462 0.00 0.00 0.00 2.32
3702 5920 6.154877 TCCATGCTAAAATGTGATGACCAAAT 59.845 34.615 0.00 0.00 0.00 2.32
3728 5946 7.220030 TGGCCATGTTTACATTGTACAATTTT 58.780 30.769 18.50 10.96 33.61 1.82
3737 5955 3.316071 TGCTTGGCCATGTTTACATTG 57.684 42.857 19.05 0.00 33.61 2.82
3752 5970 7.224362 TGAACCTCATGTTACAAATTTTGCTTG 59.776 33.333 9.04 2.81 37.29 4.01
3894 7632 0.810648 GATTGTGATTTGAGGGCGCA 59.189 50.000 10.83 0.00 0.00 6.09
3910 7650 1.680735 ACATGTGCGTGTGTTTGGATT 59.319 42.857 0.00 0.00 0.00 3.01
3913 7653 1.069296 CCTACATGTGCGTGTGTTTGG 60.069 52.381 9.11 1.68 33.62 3.28
3981 7729 5.646215 ACCCCGATTAAATAAATGGGCATA 58.354 37.500 7.31 0.00 41.02 3.14
3986 7734 5.631119 AGAGGACCCCGATTAAATAAATGG 58.369 41.667 0.00 0.00 0.00 3.16
3989 7737 5.903589 AGAGAGAGGACCCCGATTAAATAAA 59.096 40.000 0.00 0.00 0.00 1.40
4001 7749 0.825840 CCGATGGAGAGAGAGGACCC 60.826 65.000 0.00 0.00 0.00 4.46
4036 7784 5.728637 AACTTTCCACTCCATTTTCATCC 57.271 39.130 0.00 0.00 0.00 3.51
4037 7785 6.865205 CAGAAACTTTCCACTCCATTTTCATC 59.135 38.462 0.00 0.00 0.00 2.92
4038 7786 6.739565 GCAGAAACTTTCCACTCCATTTTCAT 60.740 38.462 0.00 0.00 0.00 2.57
4039 7787 5.451798 GCAGAAACTTTCCACTCCATTTTCA 60.452 40.000 0.00 0.00 0.00 2.69
4040 7788 4.984785 GCAGAAACTTTCCACTCCATTTTC 59.015 41.667 0.00 0.00 0.00 2.29
4041 7789 4.651045 AGCAGAAACTTTCCACTCCATTTT 59.349 37.500 0.00 0.00 0.00 1.82
4042 7790 4.218312 AGCAGAAACTTTCCACTCCATTT 58.782 39.130 0.00 0.00 0.00 2.32
4043 7791 3.837355 AGCAGAAACTTTCCACTCCATT 58.163 40.909 0.00 0.00 0.00 3.16
4044 7792 3.515602 AGCAGAAACTTTCCACTCCAT 57.484 42.857 0.00 0.00 0.00 3.41
4045 7793 3.297134 AAGCAGAAACTTTCCACTCCA 57.703 42.857 0.00 0.00 0.00 3.86
4046 7794 4.499865 GGAAAAGCAGAAACTTTCCACTCC 60.500 45.833 7.72 0.00 38.92 3.85
4047 7795 4.611943 GGAAAAGCAGAAACTTTCCACTC 58.388 43.478 7.72 0.00 38.92 3.51
4048 7796 3.066760 CGGAAAAGCAGAAACTTTCCACT 59.933 43.478 12.05 0.00 38.92 4.00
4049 7797 3.372060 CGGAAAAGCAGAAACTTTCCAC 58.628 45.455 12.05 0.00 38.92 4.02
4050 7798 2.360801 CCGGAAAAGCAGAAACTTTCCA 59.639 45.455 0.00 0.00 38.92 3.53
4051 7799 2.621526 TCCGGAAAAGCAGAAACTTTCC 59.378 45.455 0.00 3.24 38.92 3.13
4052 7800 3.304726 CCTCCGGAAAAGCAGAAACTTTC 60.305 47.826 5.23 0.00 38.92 2.62
4053 7801 2.623416 CCTCCGGAAAAGCAGAAACTTT 59.377 45.455 5.23 0.00 41.60 2.66
4054 7802 2.158667 TCCTCCGGAAAAGCAGAAACTT 60.159 45.455 5.23 0.00 0.00 2.66
4055 7803 1.420138 TCCTCCGGAAAAGCAGAAACT 59.580 47.619 5.23 0.00 0.00 2.66
4056 7804 1.892209 TCCTCCGGAAAAGCAGAAAC 58.108 50.000 5.23 0.00 0.00 2.78
4057 7805 2.649531 TTCCTCCGGAAAAGCAGAAA 57.350 45.000 5.23 0.00 38.93 2.52
4066 7814 3.004944 CCGTTTTCATTTTTCCTCCGGAA 59.995 43.478 5.23 0.00 40.27 4.30
4067 7815 2.554893 CCGTTTTCATTTTTCCTCCGGA 59.445 45.455 2.93 2.93 35.04 5.14
4068 7816 2.554893 TCCGTTTTCATTTTTCCTCCGG 59.445 45.455 0.00 0.00 0.00 5.14
4069 7817 3.500680 TCTCCGTTTTCATTTTTCCTCCG 59.499 43.478 0.00 0.00 0.00 4.63
4070 7818 4.760204 TCTCTCCGTTTTCATTTTTCCTCC 59.240 41.667 0.00 0.00 0.00 4.30
4071 7819 5.941948 TCTCTCCGTTTTCATTTTTCCTC 57.058 39.130 0.00 0.00 0.00 3.71
4072 7820 6.709018 TTTCTCTCCGTTTTCATTTTTCCT 57.291 33.333 0.00 0.00 0.00 3.36
4073 7821 7.946655 ATTTTCTCTCCGTTTTCATTTTTCC 57.053 32.000 0.00 0.00 0.00 3.13
4080 7828 9.624697 CATTTTCATATTTTCTCTCCGTTTTCA 57.375 29.630 0.00 0.00 0.00 2.69
4081 7829 9.840427 TCATTTTCATATTTTCTCTCCGTTTTC 57.160 29.630 0.00 0.00 0.00 2.29
4085 7833 9.626045 GTTTTCATTTTCATATTTTCTCTCCGT 57.374 29.630 0.00 0.00 0.00 4.69
4086 7834 8.788813 CGTTTTCATTTTCATATTTTCTCTCCG 58.211 33.333 0.00 0.00 0.00 4.63
4087 7835 9.840427 TCGTTTTCATTTTCATATTTTCTCTCC 57.160 29.630 0.00 0.00 0.00 3.71
4098 7846 9.565213 TTTGCAAATTTTCGTTTTCATTTTCAT 57.435 22.222 8.05 0.00 0.00 2.57
4099 7847 8.955061 TTTGCAAATTTTCGTTTTCATTTTCA 57.045 23.077 8.05 0.00 0.00 2.69
4100 7848 9.655507 GTTTTGCAAATTTTCGTTTTCATTTTC 57.344 25.926 13.65 0.00 0.00 2.29
4101 7849 8.361579 CGTTTTGCAAATTTTCGTTTTCATTTT 58.638 25.926 13.65 0.00 0.00 1.82
4102 7850 7.007815 CCGTTTTGCAAATTTTCGTTTTCATTT 59.992 29.630 13.65 0.00 0.00 2.32
4103 7851 6.467364 CCGTTTTGCAAATTTTCGTTTTCATT 59.533 30.769 13.65 0.00 0.00 2.57
4104 7852 5.962423 CCGTTTTGCAAATTTTCGTTTTCAT 59.038 32.000 13.65 0.00 0.00 2.57
4105 7853 5.120208 TCCGTTTTGCAAATTTTCGTTTTCA 59.880 32.000 13.65 0.00 0.00 2.69
4106 7854 5.551893 TCCGTTTTGCAAATTTTCGTTTTC 58.448 33.333 13.65 0.00 0.00 2.29
4107 7855 5.532025 TCCGTTTTGCAAATTTTCGTTTT 57.468 30.435 13.65 0.00 0.00 2.43
4108 7856 5.532025 TTCCGTTTTGCAAATTTTCGTTT 57.468 30.435 13.65 0.00 0.00 3.60
4109 7857 5.532025 TTTCCGTTTTGCAAATTTTCGTT 57.468 30.435 13.65 0.00 0.00 3.85
4110 7858 5.497273 CATTTCCGTTTTGCAAATTTTCGT 58.503 33.333 13.65 0.00 0.00 3.85
4111 7859 4.903016 CCATTTCCGTTTTGCAAATTTTCG 59.097 37.500 13.65 14.40 0.00 3.46
4112 7860 6.054035 TCCATTTCCGTTTTGCAAATTTTC 57.946 33.333 13.65 3.71 0.00 2.29
4113 7861 6.442513 TTCCATTTCCGTTTTGCAAATTTT 57.557 29.167 13.65 0.00 0.00 1.82
4114 7862 6.442513 TTTCCATTTCCGTTTTGCAAATTT 57.557 29.167 13.65 0.00 0.00 1.82
4115 7863 6.437094 CATTTCCATTTCCGTTTTGCAAATT 58.563 32.000 13.65 0.00 0.00 1.82
4116 7864 5.048852 CCATTTCCATTTCCGTTTTGCAAAT 60.049 36.000 13.65 0.00 0.00 2.32
4117 7865 4.274459 CCATTTCCATTTCCGTTTTGCAAA 59.726 37.500 8.05 8.05 0.00 3.68
4118 7866 3.812053 CCATTTCCATTTCCGTTTTGCAA 59.188 39.130 0.00 0.00 0.00 4.08
4119 7867 3.070159 TCCATTTCCATTTCCGTTTTGCA 59.930 39.130 0.00 0.00 0.00 4.08
4120 7868 3.658709 TCCATTTCCATTTCCGTTTTGC 58.341 40.909 0.00 0.00 0.00 3.68
4121 7869 6.799926 AATTCCATTTCCATTTCCGTTTTG 57.200 33.333 0.00 0.00 0.00 2.44
4122 7870 7.815840 AAAATTCCATTTCCATTTCCGTTTT 57.184 28.000 0.00 0.00 0.00 2.43
4123 7871 7.815840 AAAAATTCCATTTCCATTTCCGTTT 57.184 28.000 0.00 0.00 0.00 3.60
4144 7892 6.642683 TTTGTTTTCGTTTCCGCATAAAAA 57.357 29.167 0.00 0.00 0.00 1.94
4145 7893 6.642683 TTTTGTTTTCGTTTCCGCATAAAA 57.357 29.167 0.00 0.00 0.00 1.52
4146 7894 6.467648 GTTTTTGTTTTCGTTTCCGCATAAA 58.532 32.000 0.00 0.00 0.00 1.40
4147 7895 5.275788 CGTTTTTGTTTTCGTTTCCGCATAA 60.276 36.000 0.00 0.00 0.00 1.90
4148 7896 4.204573 CGTTTTTGTTTTCGTTTCCGCATA 59.795 37.500 0.00 0.00 0.00 3.14
4149 7897 3.000575 CGTTTTTGTTTTCGTTTCCGCAT 60.001 39.130 0.00 0.00 0.00 4.73
4150 7898 2.341760 CGTTTTTGTTTTCGTTTCCGCA 59.658 40.909 0.00 0.00 0.00 5.69
4151 7899 2.284571 CCGTTTTTGTTTTCGTTTCCGC 60.285 45.455 0.00 0.00 0.00 5.54
4152 7900 3.169733 TCCGTTTTTGTTTTCGTTTCCG 58.830 40.909 0.00 0.00 0.00 4.30
4153 7901 5.288952 TCATTCCGTTTTTGTTTTCGTTTCC 59.711 36.000 0.00 0.00 0.00 3.13
4154 7902 6.320551 TCATTCCGTTTTTGTTTTCGTTTC 57.679 33.333 0.00 0.00 0.00 2.78
4155 7903 6.311690 ACATCATTCCGTTTTTGTTTTCGTTT 59.688 30.769 0.00 0.00 0.00 3.60
4156 7904 5.808030 ACATCATTCCGTTTTTGTTTTCGTT 59.192 32.000 0.00 0.00 0.00 3.85
4157 7905 5.344884 ACATCATTCCGTTTTTGTTTTCGT 58.655 33.333 0.00 0.00 0.00 3.85
4158 7906 5.881637 ACATCATTCCGTTTTTGTTTTCG 57.118 34.783 0.00 0.00 0.00 3.46
4160 7908 7.468441 GGAAAACATCATTCCGTTTTTGTTTT 58.532 30.769 10.35 10.35 43.46 2.43
4161 7909 7.010697 GGAAAACATCATTCCGTTTTTGTTT 57.989 32.000 0.00 0.00 43.46 2.83
4162 7910 6.597262 GGAAAACATCATTCCGTTTTTGTT 57.403 33.333 0.00 0.00 43.46 2.83
4171 7919 2.442413 TCCACCGGAAAACATCATTCC 58.558 47.619 9.46 0.00 42.41 3.01
4172 7920 3.254657 TGTTCCACCGGAAAACATCATTC 59.745 43.478 9.46 0.00 43.86 2.67
4173 7921 3.005367 GTGTTCCACCGGAAAACATCATT 59.995 43.478 9.46 0.00 46.26 2.57
4174 7922 2.556622 GTGTTCCACCGGAAAACATCAT 59.443 45.455 9.46 0.00 46.26 2.45
4175 7923 1.950909 GTGTTCCACCGGAAAACATCA 59.049 47.619 9.46 0.00 46.26 3.07
4176 7924 2.699251 GTGTTCCACCGGAAAACATC 57.301 50.000 9.46 6.79 46.26 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.