Multiple sequence alignment - TraesCS7D01G098600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G098600 chr7D 100.000 4500 0 0 573 5072 59094360 59089861 0.000000e+00 8311.0
1 TraesCS7D01G098600 chr7D 89.384 584 48 7 3367 3938 58992889 58992308 0.000000e+00 723.0
2 TraesCS7D01G098600 chr7D 84.453 759 84 21 3176 3919 58938190 58937451 0.000000e+00 717.0
3 TraesCS7D01G098600 chr7D 100.000 221 0 0 1 221 59094932 59094712 4.730000e-110 409.0
4 TraesCS7D01G098600 chr7D 92.920 226 16 0 3106 3331 58993475 58993250 3.790000e-86 329.0
5 TraesCS7D01G098600 chr7D 96.774 62 2 0 3049 3110 58993801 58993740 2.500000e-18 104.0
6 TraesCS7D01G098600 chr7A 87.444 3584 282 83 573 4120 63707658 63711109 0.000000e+00 3971.0
7 TraesCS7D01G098600 chr7A 87.646 858 89 13 3176 4020 63554360 63553507 0.000000e+00 981.0
8 TraesCS7D01G098600 chr7A 88.795 589 52 7 3351 3927 63577864 63577278 0.000000e+00 710.0
9 TraesCS7D01G098600 chr7A 95.146 206 10 0 16 221 63707378 63707583 4.900000e-85 326.0
10 TraesCS7D01G098600 chr7A 89.362 188 13 2 3049 3229 63578468 63578281 3.950000e-56 230.0
11 TraesCS7D01G098600 chr7A 89.189 111 10 2 2937 3047 63578673 63578565 2.460000e-28 137.0
12 TraesCS7D01G098600 chr7A 96.104 77 3 0 3255 3331 63578282 63578206 5.330000e-25 126.0
13 TraesCS7D01G098600 chr7A 87.037 54 7 0 4690 4743 252214160 252214213 1.520000e-05 62.1
14 TraesCS7D01G098600 chr4A 87.610 2728 180 72 648 3331 676531302 676528689 0.000000e+00 3020.0
15 TraesCS7D01G098600 chr4A 91.009 1001 67 8 3049 4034 676456803 676455811 0.000000e+00 1328.0
16 TraesCS7D01G098600 chr4A 94.498 727 34 3 3351 4076 676528352 676527631 0.000000e+00 1116.0
17 TraesCS7D01G098600 chr4A 91.304 253 15 3 3799 4044 676362453 676362201 6.290000e-89 339.0
18 TraesCS7D01G098600 chr4A 92.857 224 8 3 6 221 676531876 676531653 8.190000e-83 318.0
19 TraesCS7D01G098600 chr4A 73.000 700 139 40 4394 5061 693228244 693228925 3.100000e-47 200.0
20 TraesCS7D01G098600 chr4A 93.694 111 6 1 2937 3047 676493823 676493714 1.130000e-36 165.0
21 TraesCS7D01G098600 chr4A 90.991 111 8 2 2937 3047 676457008 676456900 1.140000e-31 148.0
22 TraesCS7D01G098600 chr4A 94.000 50 3 0 4062 4111 676505078 676505029 5.450000e-10 76.8
23 TraesCS7D01G098600 chr2D 96.714 700 10 2 4386 5072 600580591 600581290 0.000000e+00 1153.0
24 TraesCS7D01G098600 chr2D 96.839 696 9 2 4390 5072 535233354 535234049 0.000000e+00 1151.0
25 TraesCS7D01G098600 chr6B 94.971 696 22 2 4390 5072 136357767 136357072 0.000000e+00 1079.0
26 TraesCS7D01G098600 chr5B 73.163 667 143 27 4396 5037 17592250 17592905 1.850000e-49 207.0
27 TraesCS7D01G098600 chr5B 73.563 522 109 26 4394 4900 493583248 493583755 6.750000e-39 172.0
28 TraesCS7D01G098600 chr5B 72.470 672 137 33 4396 5037 671131796 671132449 6.750000e-39 172.0
29 TraesCS7D01G098600 chr7B 72.795 533 115 29 4393 4909 382340727 382340209 2.450000e-33 154.0
30 TraesCS7D01G098600 chr2B 71.218 542 130 23 4394 4923 91026575 91026048 4.150000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G098600 chr7D 59089861 59094932 5071 True 4360.000000 8311 100.0000 1 5072 2 chr7D.!!$R3 5071
1 TraesCS7D01G098600 chr7D 58937451 58938190 739 True 717.000000 717 84.4530 3176 3919 1 chr7D.!!$R1 743
2 TraesCS7D01G098600 chr7D 58992308 58993801 1493 True 385.333333 723 93.0260 3049 3938 3 chr7D.!!$R2 889
3 TraesCS7D01G098600 chr7A 63707378 63711109 3731 False 2148.500000 3971 91.2950 16 4120 2 chr7A.!!$F2 4104
4 TraesCS7D01G098600 chr7A 63553507 63554360 853 True 981.000000 981 87.6460 3176 4020 1 chr7A.!!$R1 844
5 TraesCS7D01G098600 chr7A 63577278 63578673 1395 True 300.750000 710 90.8625 2937 3927 4 chr7A.!!$R2 990
6 TraesCS7D01G098600 chr4A 676527631 676531876 4245 True 1484.666667 3020 91.6550 6 4076 3 chr4A.!!$R5 4070
7 TraesCS7D01G098600 chr4A 676455811 676457008 1197 True 738.000000 1328 91.0000 2937 4034 2 chr4A.!!$R4 1097
8 TraesCS7D01G098600 chr2D 600580591 600581290 699 False 1153.000000 1153 96.7140 4386 5072 1 chr2D.!!$F2 686
9 TraesCS7D01G098600 chr2D 535233354 535234049 695 False 1151.000000 1151 96.8390 4390 5072 1 chr2D.!!$F1 682
10 TraesCS7D01G098600 chr6B 136357072 136357767 695 True 1079.000000 1079 94.9710 4390 5072 1 chr6B.!!$R1 682
11 TraesCS7D01G098600 chr5B 17592250 17592905 655 False 207.000000 207 73.1630 4396 5037 1 chr5B.!!$F1 641

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
986 1202 0.035630 CTGCAGGGGAAGAAGTGGAG 60.036 60.0 5.57 0.00 0.00 3.86 F
1538 1783 0.178992 TGGTTTGTCTCCAGGCTTGG 60.179 55.0 8.96 8.96 46.49 3.61 F
2604 2867 0.745845 CCCTGCCACTGAGTACATGC 60.746 60.0 0.00 0.00 0.00 4.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2884 3148 0.033920 CTACACAGCAGTCCAGCACA 59.966 55.0 0.0 0.0 36.85 4.57 R
2885 3149 0.034059 ACTACACAGCAGTCCAGCAC 59.966 55.0 0.0 0.0 36.85 4.40 R
4367 5364 0.037605 CGGTGGCGTTTTCCTAGTCT 60.038 55.0 0.0 0.0 0.00 3.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 56 4.035843 GGAGGAGATCCGTGTGGT 57.964 61.111 0.00 0.00 38.67 4.16
56 65 4.602259 CCGTGTGGTGTGGAGCGT 62.602 66.667 0.00 0.00 0.00 5.07
667 877 1.004560 ATGCAGTGGAGTCGGTGTG 60.005 57.895 0.00 0.00 0.00 3.82
707 917 2.099062 GCACTGAGCGCCGATTTG 59.901 61.111 2.29 0.00 0.00 2.32
709 919 3.127533 ACTGAGCGCCGATTTGCC 61.128 61.111 2.29 0.00 0.00 4.52
710 920 4.228097 CTGAGCGCCGATTTGCCG 62.228 66.667 2.29 0.00 0.00 5.69
712 922 4.223964 GAGCGCCGATTTGCCGTC 62.224 66.667 2.29 0.00 0.00 4.79
746 958 2.579738 GCCACCTCGGTTCTCCTC 59.420 66.667 0.00 0.00 36.97 3.71
747 959 3.020237 GCCACCTCGGTTCTCCTCC 62.020 68.421 0.00 0.00 36.97 4.30
792 1004 2.951745 GAGCATCCGAGTCACGCG 60.952 66.667 3.53 3.53 41.07 6.01
973 1189 2.433838 CACTGACCGAGCTGCAGG 60.434 66.667 17.12 11.76 34.05 4.85
982 1198 1.682257 GAGCTGCAGGGGAAGAAGT 59.318 57.895 17.12 0.00 0.00 3.01
986 1202 0.035630 CTGCAGGGGAAGAAGTGGAG 60.036 60.000 5.57 0.00 0.00 3.86
1025 1247 4.847444 GAGAGGAAGCGCTGCCCC 62.847 72.222 31.70 21.08 0.00 5.80
1071 1296 2.716017 CGTGCTCCTCCTCCTGGTC 61.716 68.421 0.00 0.00 34.23 4.02
1074 1299 2.363018 CTCCTCCTCCTGGTCGCA 60.363 66.667 0.00 0.00 34.23 5.10
1230 1455 2.045926 CCGCCCTCCAAGAAGGTG 60.046 66.667 0.00 0.00 39.02 4.00
1236 1461 1.239968 CCTCCAAGAAGGTGCTGTGC 61.240 60.000 0.00 0.00 39.02 4.57
1244 1469 2.158696 AGAAGGTGCTGTGCTTCTTCTT 60.159 45.455 15.89 0.00 41.52 2.52
1245 1470 3.071602 AGAAGGTGCTGTGCTTCTTCTTA 59.928 43.478 15.89 0.00 41.52 2.10
1247 1472 3.341823 AGGTGCTGTGCTTCTTCTTATG 58.658 45.455 0.00 0.00 0.00 1.90
1248 1473 2.159462 GGTGCTGTGCTTCTTCTTATGC 60.159 50.000 0.00 0.00 0.00 3.14
1249 1474 2.746362 GTGCTGTGCTTCTTCTTATGCT 59.254 45.455 0.00 0.00 0.00 3.79
1250 1475 2.745821 TGCTGTGCTTCTTCTTATGCTG 59.254 45.455 0.00 0.00 0.00 4.41
1251 1476 2.477525 GCTGTGCTTCTTCTTATGCTGC 60.478 50.000 0.00 0.00 0.00 5.25
1252 1477 3.008330 CTGTGCTTCTTCTTATGCTGCT 58.992 45.455 0.00 0.00 0.00 4.24
1253 1478 2.745821 TGTGCTTCTTCTTATGCTGCTG 59.254 45.455 0.00 0.00 0.00 4.41
1254 1479 3.005554 GTGCTTCTTCTTATGCTGCTGA 58.994 45.455 0.00 0.00 0.00 4.26
1255 1480 3.626670 GTGCTTCTTCTTATGCTGCTGAT 59.373 43.478 0.00 0.00 0.00 2.90
1256 1481 3.626217 TGCTTCTTCTTATGCTGCTGATG 59.374 43.478 0.00 0.00 0.00 3.07
1257 1482 3.548415 GCTTCTTCTTATGCTGCTGATGC 60.548 47.826 0.00 0.00 40.20 3.91
1258 1483 3.555527 TCTTCTTATGCTGCTGATGCT 57.444 42.857 0.00 0.00 40.48 3.79
1259 1484 3.203716 TCTTCTTATGCTGCTGATGCTG 58.796 45.455 0.00 0.00 40.48 4.41
1260 1485 1.963172 TCTTATGCTGCTGATGCTGG 58.037 50.000 0.00 0.00 40.48 4.85
1261 1486 0.311165 CTTATGCTGCTGATGCTGGC 59.689 55.000 0.00 0.00 40.48 4.85
1262 1487 1.441732 TTATGCTGCTGATGCTGGCG 61.442 55.000 0.00 0.00 39.78 5.69
1270 1495 0.957395 CTGATGCTGGCGTCTGGTTT 60.957 55.000 14.64 0.00 33.41 3.27
1287 1512 0.679640 TTTGGCGGGCGAATTCTGAT 60.680 50.000 3.52 0.00 0.00 2.90
1288 1513 1.375853 TTGGCGGGCGAATTCTGATG 61.376 55.000 3.52 0.00 0.00 3.07
1289 1514 1.523711 GGCGGGCGAATTCTGATGA 60.524 57.895 3.52 0.00 0.00 2.92
1291 1516 0.811616 GCGGGCGAATTCTGATGAGT 60.812 55.000 3.52 0.00 0.00 3.41
1293 1518 1.212616 GGGCGAATTCTGATGAGTCG 58.787 55.000 3.52 0.00 35.80 4.18
1294 1519 1.202417 GGGCGAATTCTGATGAGTCGA 60.202 52.381 3.52 0.00 35.14 4.20
1295 1520 2.123342 GGCGAATTCTGATGAGTCGAG 58.877 52.381 3.52 0.00 35.14 4.04
1296 1521 2.223595 GGCGAATTCTGATGAGTCGAGA 60.224 50.000 3.52 0.00 35.14 4.04
1298 1523 3.488384 GCGAATTCTGATGAGTCGAGAGT 60.488 47.826 3.52 0.00 35.14 3.24
1299 1524 4.667262 CGAATTCTGATGAGTCGAGAGTT 58.333 43.478 3.52 0.00 35.14 3.01
1302 1527 3.839051 TCTGATGAGTCGAGAGTTGTG 57.161 47.619 0.00 0.00 0.00 3.33
1303 1528 3.149981 TCTGATGAGTCGAGAGTTGTGT 58.850 45.455 0.00 0.00 0.00 3.72
1304 1529 3.057946 TCTGATGAGTCGAGAGTTGTGTG 60.058 47.826 0.00 0.00 0.00 3.82
1305 1530 2.623416 TGATGAGTCGAGAGTTGTGTGT 59.377 45.455 0.00 0.00 0.00 3.72
1306 1531 2.492019 TGAGTCGAGAGTTGTGTGTG 57.508 50.000 0.00 0.00 0.00 3.82
1307 1532 1.749063 TGAGTCGAGAGTTGTGTGTGT 59.251 47.619 0.00 0.00 0.00 3.72
1308 1533 2.120232 GAGTCGAGAGTTGTGTGTGTG 58.880 52.381 0.00 0.00 0.00 3.82
1309 1534 0.577269 GTCGAGAGTTGTGTGTGTGC 59.423 55.000 0.00 0.00 0.00 4.57
1310 1535 0.869880 TCGAGAGTTGTGTGTGTGCG 60.870 55.000 0.00 0.00 0.00 5.34
1311 1536 1.821241 CGAGAGTTGTGTGTGTGCGG 61.821 60.000 0.00 0.00 0.00 5.69
1312 1537 1.498865 GAGAGTTGTGTGTGTGCGGG 61.499 60.000 0.00 0.00 0.00 6.13
1313 1538 2.515991 AGTTGTGTGTGTGCGGGG 60.516 61.111 0.00 0.00 0.00 5.73
1314 1539 3.591835 GTTGTGTGTGTGCGGGGG 61.592 66.667 0.00 0.00 0.00 5.40
1471 1707 2.511879 GCGGATTCGTGCGTTTTTAAT 58.488 42.857 0.00 0.00 38.89 1.40
1495 1733 1.471684 GCTGACAGGAAATTGCTCTGG 59.528 52.381 4.26 0.00 33.19 3.86
1496 1734 2.877300 GCTGACAGGAAATTGCTCTGGA 60.877 50.000 4.26 0.00 33.19 3.86
1514 1759 3.538591 TGGATGAGCTATGAACTGCTTG 58.461 45.455 0.00 0.00 39.91 4.01
1523 1768 0.752743 TGAACTGCTTGCTGCTGGTT 60.753 50.000 0.00 11.50 40.70 3.67
1524 1769 0.386838 GAACTGCTTGCTGCTGGTTT 59.613 50.000 0.00 1.34 40.70 3.27
1526 1771 1.039233 ACTGCTTGCTGCTGGTTTGT 61.039 50.000 0.00 0.00 43.66 2.83
1536 1781 3.733709 CTGGTTTGTCTCCAGGCTT 57.266 52.632 4.27 0.00 46.03 4.35
1537 1782 1.242076 CTGGTTTGTCTCCAGGCTTG 58.758 55.000 4.27 0.00 46.03 4.01
1538 1783 0.178992 TGGTTTGTCTCCAGGCTTGG 60.179 55.000 8.96 8.96 46.49 3.61
1568 1814 8.181904 TCCAAAAGATTTAAATCTGCTTCACT 57.818 30.769 27.25 10.33 44.67 3.41
1576 1822 0.330604 ATCTGCTTCACTGCCACCAT 59.669 50.000 0.00 0.00 0.00 3.55
1595 1841 4.342951 ACCATGTGCAATGCTAAATGCTAT 59.657 37.500 6.82 0.00 42.97 2.97
1596 1842 4.684242 CCATGTGCAATGCTAAATGCTATG 59.316 41.667 6.82 0.00 42.97 2.23
1597 1843 3.708890 TGTGCAATGCTAAATGCTATGC 58.291 40.909 6.82 9.84 46.43 3.14
1601 1847 5.074430 GCAATGCTAAATGCTATGCAAAC 57.926 39.130 0.00 0.00 45.94 2.93
1602 1848 4.567558 GCAATGCTAAATGCTATGCAAACA 59.432 37.500 0.00 0.00 45.94 2.83
1603 1849 5.276678 GCAATGCTAAATGCTATGCAAACAG 60.277 40.000 0.00 0.00 45.94 3.16
1604 1850 5.587388 ATGCTAAATGCTATGCAAACAGT 57.413 34.783 0.00 0.00 43.62 3.55
1605 1851 5.389859 TGCTAAATGCTATGCAAACAGTT 57.610 34.783 0.00 0.00 43.62 3.16
1606 1852 5.401550 TGCTAAATGCTATGCAAACAGTTC 58.598 37.500 0.00 0.00 43.62 3.01
1607 1853 5.048154 TGCTAAATGCTATGCAAACAGTTCA 60.048 36.000 0.00 0.00 43.62 3.18
1608 1854 5.863397 GCTAAATGCTATGCAAACAGTTCAA 59.137 36.000 0.00 0.00 43.62 2.69
1609 1855 6.365789 GCTAAATGCTATGCAAACAGTTCAAA 59.634 34.615 0.00 0.00 43.62 2.69
1610 1856 7.095691 GCTAAATGCTATGCAAACAGTTCAAAA 60.096 33.333 0.00 0.00 43.62 2.44
1611 1857 7.551035 AAATGCTATGCAAACAGTTCAAAAA 57.449 28.000 0.00 0.00 43.62 1.94
1657 1903 6.291164 GCGACTCAGATCGTATACTTTGTTTC 60.291 42.308 0.56 0.00 44.13 2.78
1662 1908 3.959535 TCGTATACTTTGTTTCCCCGT 57.040 42.857 0.56 0.00 0.00 5.28
1666 1912 3.495434 ATACTTTGTTTCCCCGTGTGA 57.505 42.857 0.00 0.00 0.00 3.58
1672 1918 1.631388 TGTTTCCCCGTGTGACCATAT 59.369 47.619 0.00 0.00 0.00 1.78
1679 1925 2.422127 CCCGTGTGACCATATTTGGAAC 59.578 50.000 9.40 7.39 46.92 3.62
1680 1926 3.078097 CCGTGTGACCATATTTGGAACA 58.922 45.455 9.40 9.74 46.92 3.18
1688 1934 5.010516 TGACCATATTTGGAACACAACCAAG 59.989 40.000 9.40 0.00 46.92 3.61
1693 1939 2.719531 TGGAACACAACCAAGCAGTA 57.280 45.000 0.00 0.00 34.25 2.74
1702 1948 5.068987 ACACAACCAAGCAGTAATCAAACAT 59.931 36.000 0.00 0.00 0.00 2.71
1719 1965 9.787532 AATCAAACATATTGACAATCTAAACGG 57.212 29.630 3.36 0.00 0.00 4.44
1753 1999 8.893563 ATTGGATGGTTTCATTTAGGAAGTTA 57.106 30.769 0.00 0.00 32.98 2.24
1778 2024 6.310711 ACTTATTCTTTAACTCGGCGAAGAAG 59.689 38.462 21.15 16.59 40.30 2.85
1788 2034 1.721926 CGGCGAAGAAGTTGACTCTTC 59.278 52.381 0.00 3.05 42.67 2.87
1842 2096 9.945904 CTAGTTTTGTTTCCTCCTAGAAATACT 57.054 33.333 0.00 0.00 38.01 2.12
1847 2101 9.681062 TTTGTTTCCTCCTAGAAATACTATTGG 57.319 33.333 0.00 0.00 38.01 3.16
1850 2104 9.901172 GTTTCCTCCTAGAAATACTATTGGAAA 57.099 33.333 0.00 0.00 38.95 3.13
1891 2145 7.589958 AGTCATCTTCAGTAGGTATAACTGG 57.410 40.000 0.00 0.00 43.69 4.00
1892 2146 6.041069 AGTCATCTTCAGTAGGTATAACTGGC 59.959 42.308 0.00 0.00 43.69 4.85
1893 2147 5.304614 TCATCTTCAGTAGGTATAACTGGCC 59.695 44.000 0.00 0.00 43.69 5.36
1894 2148 4.616553 TCTTCAGTAGGTATAACTGGCCA 58.383 43.478 4.71 4.71 43.69 5.36
1895 2149 4.404715 TCTTCAGTAGGTATAACTGGCCAC 59.595 45.833 0.00 0.00 43.69 5.01
1896 2150 3.715287 TCAGTAGGTATAACTGGCCACA 58.285 45.455 0.00 0.00 43.69 4.17
1931 2185 3.138884 TGCACAAACCTAGCATCTCAA 57.861 42.857 0.00 0.00 32.55 3.02
1944 2198 8.874156 ACCTAGCATCTCAATCACATTCTAATA 58.126 33.333 0.00 0.00 0.00 0.98
1947 2201 8.375608 AGCATCTCAATCACATTCTAATACAC 57.624 34.615 0.00 0.00 0.00 2.90
1952 2206 9.685276 TCTCAATCACATTCTAATACACCAAAT 57.315 29.630 0.00 0.00 0.00 2.32
1995 2249 3.118531 AGATGAGGAAGGGCACTGTAAT 58.881 45.455 0.00 0.00 0.00 1.89
2001 2255 2.280628 GAAGGGCACTGTAATTCGGAG 58.719 52.381 0.00 0.00 0.00 4.63
2041 2295 1.211212 CATGCCAGGAGGTGAAGATCA 59.789 52.381 0.00 0.00 37.19 2.92
2050 2304 7.683578 CCAGGAGGTGAAGATCAATTCATATA 58.316 38.462 0.00 0.00 41.05 0.86
2171 2429 9.453572 AACATCACTGTTGAGTAAATGATATGT 57.546 29.630 0.00 0.00 43.92 2.29
2268 2529 8.430063 CCACAATATTTAATAGTTACGTAGCGG 58.570 37.037 3.64 0.00 0.00 5.52
2269 2530 7.948363 CACAATATTTAATAGTTACGTAGCGGC 59.052 37.037 3.64 0.00 0.00 6.53
2297 2558 5.163513 CAGCACCATTATTTCTGTTGAACC 58.836 41.667 0.00 0.00 31.02 3.62
2302 2563 6.808212 CACCATTATTTCTGTTGAACCATGTC 59.192 38.462 0.00 0.00 31.02 3.06
2321 2584 3.755905 TGTCAACTTGTGCTCAACTGAAA 59.244 39.130 9.12 3.49 0.00 2.69
2464 2727 1.078426 CGATCCACCACCAGTTCCC 60.078 63.158 0.00 0.00 0.00 3.97
2496 2759 0.178992 CCCAGTCTTGTTTCTGCCCA 60.179 55.000 0.00 0.00 0.00 5.36
2512 2775 8.528643 GTTTCTGCCCACTTAATTAGGTTATTT 58.471 33.333 0.00 0.00 0.00 1.40
2546 2809 2.510613 GGCAAGTAGGCAGGTTTTACA 58.489 47.619 0.00 0.00 43.51 2.41
2556 2819 3.372060 GCAGGTTTTACAACTTCAGTGC 58.628 45.455 0.00 0.00 32.90 4.40
2577 2840 9.340695 CAGTGCGAAATAAATGTCAAATTAGAA 57.659 29.630 0.00 0.00 0.00 2.10
2602 2865 1.556911 CTTCCCTGCCACTGAGTACAT 59.443 52.381 0.00 0.00 0.00 2.29
2604 2867 0.745845 CCCTGCCACTGAGTACATGC 60.746 60.000 0.00 0.00 0.00 4.06
2639 2902 6.532988 TCAATCATGGAATTTGCAAGATGA 57.467 33.333 9.01 2.85 27.05 2.92
2729 2993 9.087871 TGGATACTATACTAGTCTTAGTCGAGT 57.912 37.037 17.31 0.00 40.14 4.18
2853 3117 9.982651 GGTATTAACTATTAAGATCAGAGCACA 57.017 33.333 0.00 0.00 0.00 4.57
2875 3139 4.558226 AGACCACACAGAAATGCATCTA 57.442 40.909 0.00 0.00 0.00 1.98
2876 3140 5.108187 AGACCACACAGAAATGCATCTAT 57.892 39.130 0.00 0.00 0.00 1.98
2878 3142 5.356190 AGACCACACAGAAATGCATCTATTG 59.644 40.000 0.00 0.00 0.00 1.90
2879 3143 5.255687 ACCACACAGAAATGCATCTATTGA 58.744 37.500 0.00 0.00 0.00 2.57
2880 3144 5.889853 ACCACACAGAAATGCATCTATTGAT 59.110 36.000 0.00 0.00 0.00 2.57
2881 3145 7.056006 ACCACACAGAAATGCATCTATTGATA 58.944 34.615 0.00 0.00 0.00 2.15
2882 3146 7.722728 ACCACACAGAAATGCATCTATTGATAT 59.277 33.333 0.00 0.00 0.00 1.63
2883 3147 8.021396 CCACACAGAAATGCATCTATTGATATG 58.979 37.037 0.00 0.00 0.00 1.78
2884 3148 8.565416 CACACAGAAATGCATCTATTGATATGT 58.435 33.333 0.00 0.00 0.00 2.29
2885 3149 8.565416 ACACAGAAATGCATCTATTGATATGTG 58.435 33.333 0.00 7.94 0.00 3.21
2886 3150 8.565416 CACAGAAATGCATCTATTGATATGTGT 58.435 33.333 0.00 0.00 0.00 3.72
2887 3151 8.565416 ACAGAAATGCATCTATTGATATGTGTG 58.435 33.333 0.00 0.00 0.00 3.82
2888 3152 7.537649 CAGAAATGCATCTATTGATATGTGTGC 59.462 37.037 0.00 0.00 0.00 4.57
2889 3153 7.447545 AGAAATGCATCTATTGATATGTGTGCT 59.552 33.333 0.00 0.00 0.00 4.40
2890 3154 5.934935 TGCATCTATTGATATGTGTGCTG 57.065 39.130 0.00 0.00 0.00 4.41
2891 3155 4.758165 TGCATCTATTGATATGTGTGCTGG 59.242 41.667 0.00 0.00 0.00 4.85
2892 3156 4.999311 GCATCTATTGATATGTGTGCTGGA 59.001 41.667 0.00 0.00 0.00 3.86
2918 3182 7.915397 ACTGCTGTGTAGTAAATTCAGTTTTTG 59.085 33.333 0.00 0.00 30.30 2.44
2920 3184 7.700234 TGCTGTGTAGTAAATTCAGTTTTTGTG 59.300 33.333 0.00 0.00 0.00 3.33
2922 3186 8.903570 TGTGTAGTAAATTCAGTTTTTGTGTG 57.096 30.769 0.00 0.00 0.00 3.82
2923 3187 8.516234 TGTGTAGTAAATTCAGTTTTTGTGTGT 58.484 29.630 0.00 0.00 0.00 3.72
2924 3188 8.794406 GTGTAGTAAATTCAGTTTTTGTGTGTG 58.206 33.333 0.00 0.00 0.00 3.82
2925 3189 8.516234 TGTAGTAAATTCAGTTTTTGTGTGTGT 58.484 29.630 0.00 0.00 0.00 3.72
2926 3190 7.810766 AGTAAATTCAGTTTTTGTGTGTGTG 57.189 32.000 0.00 0.00 0.00 3.82
2927 3191 7.375053 AGTAAATTCAGTTTTTGTGTGTGTGT 58.625 30.769 0.00 0.00 0.00 3.72
2928 3192 6.464895 AAATTCAGTTTTTGTGTGTGTGTG 57.535 33.333 0.00 0.00 0.00 3.82
2929 3193 4.576216 TTCAGTTTTTGTGTGTGTGTGT 57.424 36.364 0.00 0.00 0.00 3.72
2930 3194 3.894920 TCAGTTTTTGTGTGTGTGTGTG 58.105 40.909 0.00 0.00 0.00 3.82
2931 3195 3.316588 TCAGTTTTTGTGTGTGTGTGTGT 59.683 39.130 0.00 0.00 0.00 3.72
2932 3196 3.424861 CAGTTTTTGTGTGTGTGTGTGTG 59.575 43.478 0.00 0.00 0.00 3.82
2933 3197 3.316588 AGTTTTTGTGTGTGTGTGTGTGA 59.683 39.130 0.00 0.00 0.00 3.58
2934 3198 3.990318 TTTTGTGTGTGTGTGTGTGAA 57.010 38.095 0.00 0.00 0.00 3.18
2935 3199 4.511617 TTTTGTGTGTGTGTGTGTGAAT 57.488 36.364 0.00 0.00 0.00 2.57
2943 3207 7.148239 TGTGTGTGTGTGTGTGAATTTATTACA 60.148 33.333 0.00 0.00 0.00 2.41
2946 3210 7.860373 GTGTGTGTGTGTGAATTTATTACATGT 59.140 33.333 2.69 2.69 0.00 3.21
3047 3314 3.475566 TCAGCCATGTAAGCAGATACC 57.524 47.619 0.00 0.00 0.00 2.73
3111 3735 3.748048 TGTCTGAATGCTCTGCTTGTAAC 59.252 43.478 0.00 0.00 0.00 2.50
3118 3749 5.869753 ATGCTCTGCTTGTAACTGTTAAG 57.130 39.130 1.10 0.37 0.00 1.85
3129 3760 2.620251 ACTGTTAAGTGTCTGCTGCA 57.380 45.000 0.88 0.88 34.48 4.41
3146 3777 5.683681 TGCTGCAAATAAGTATCTGGATGA 58.316 37.500 0.00 0.00 0.00 2.92
3151 3782 6.327365 TGCAAATAAGTATCTGGATGAGAGGA 59.673 38.462 0.00 0.00 32.80 3.71
3194 3825 5.239359 TGCATTTCTGACATACAGCAATC 57.761 39.130 0.00 0.00 45.38 2.67
3357 4314 9.239002 GCAAAAATACAACTGTTACATTACACA 57.761 29.630 0.00 0.00 0.00 3.72
3413 4378 6.805016 AACATGAAGATGTACTCCAGAGAT 57.195 37.500 0.00 0.00 42.30 2.75
3443 4408 2.844122 AGAACAACTTTGGCGTTGAC 57.156 45.000 10.29 4.68 45.40 3.18
3476 4441 5.634439 GGATGATGAAGATGACGATGAAGAG 59.366 44.000 0.00 0.00 0.00 2.85
3546 4523 0.981277 TGTTACTAGGGCTGGCTCCC 60.981 60.000 7.23 7.23 46.93 4.30
3557 4534 1.152030 TGGCTCCCCACAGTTCTCT 60.152 57.895 0.00 0.00 35.79 3.10
3606 4586 4.365514 TGAACTGCTGAGGGTTAAATCA 57.634 40.909 0.00 0.00 0.00 2.57
3609 4589 5.880332 TGAACTGCTGAGGGTTAAATCATAC 59.120 40.000 0.00 0.00 0.00 2.39
3685 4666 2.238353 CTGAAGCAACAGGTCGTGG 58.762 57.895 0.00 0.00 34.64 4.94
3738 4719 0.607489 GGCATGTGAGCAAGGTGTCT 60.607 55.000 0.00 0.00 35.83 3.41
3762 4743 4.810345 AGGTGGTAAAGAATTGGTGGAAA 58.190 39.130 0.00 0.00 0.00 3.13
3779 4760 2.224892 GGAAAGGGAAGAAGAAGCCTGT 60.225 50.000 0.00 0.00 0.00 4.00
3780 4761 2.575805 AAGGGAAGAAGAAGCCTGTG 57.424 50.000 0.00 0.00 0.00 3.66
3830 4819 1.358046 GGCAGCATCCTCAAATCGC 59.642 57.895 0.00 0.00 0.00 4.58
3903 4899 3.331150 ACGTGCACGATGATTTTAAGGA 58.669 40.909 42.94 0.00 43.02 3.36
4041 5038 4.106029 TGAGCGGACATACTCTGTAAAC 57.894 45.455 0.00 0.00 38.54 2.01
4042 5039 3.762288 TGAGCGGACATACTCTGTAAACT 59.238 43.478 0.00 0.00 38.54 2.66
4106 5103 3.407657 GCGAGAGGCAGAGCAATG 58.592 61.111 0.00 0.00 42.87 2.82
4109 5106 1.088340 CGAGAGGCAGAGCAATGTGG 61.088 60.000 0.00 0.00 0.00 4.17
4112 5109 3.455469 GGCAGAGCAATGTGGGCC 61.455 66.667 0.00 0.00 0.00 5.80
4129 5126 3.403057 CGCGTCCGGACAACTGTG 61.403 66.667 32.80 19.24 0.00 3.66
4130 5127 2.028484 GCGTCCGGACAACTGTGA 59.972 61.111 32.80 0.00 0.00 3.58
4131 5128 2.022129 GCGTCCGGACAACTGTGAG 61.022 63.158 32.80 15.60 0.00 3.51
4132 5129 1.372997 CGTCCGGACAACTGTGAGG 60.373 63.158 32.80 10.53 0.00 3.86
4133 5130 1.004918 GTCCGGACAACTGTGAGGG 60.005 63.158 29.75 0.00 0.00 4.30
4134 5131 2.358737 CCGGACAACTGTGAGGGC 60.359 66.667 0.00 0.00 0.00 5.19
4135 5132 2.425592 CGGACAACTGTGAGGGCA 59.574 61.111 0.00 0.00 0.00 5.36
4136 5133 1.669115 CGGACAACTGTGAGGGCAG 60.669 63.158 0.00 0.00 41.92 4.85
4137 5134 1.968540 GGACAACTGTGAGGGCAGC 60.969 63.158 0.00 0.00 39.96 5.25
4138 5135 1.072159 GACAACTGTGAGGGCAGCT 59.928 57.895 0.00 0.00 39.96 4.24
4139 5136 1.228063 ACAACTGTGAGGGCAGCTG 60.228 57.895 10.11 10.11 39.96 4.24
4140 5137 1.071987 CAACTGTGAGGGCAGCTGA 59.928 57.895 20.43 0.00 39.96 4.26
4141 5138 1.072159 AACTGTGAGGGCAGCTGAC 59.928 57.895 20.43 16.66 39.96 3.51
4142 5139 2.433838 CTGTGAGGGCAGCTGACG 60.434 66.667 20.43 0.00 0.00 4.35
4143 5140 3.231889 CTGTGAGGGCAGCTGACGT 62.232 63.158 20.43 18.29 0.00 4.34
4144 5141 2.031163 GTGAGGGCAGCTGACGTT 59.969 61.111 20.43 6.37 0.00 3.99
4145 5142 1.292223 GTGAGGGCAGCTGACGTTA 59.708 57.895 20.43 10.94 0.00 3.18
4146 5143 1.014564 GTGAGGGCAGCTGACGTTAC 61.015 60.000 19.74 19.74 0.00 2.50
4147 5144 1.292223 GAGGGCAGCTGACGTTACA 59.708 57.895 20.43 0.00 0.00 2.41
4148 5145 1.004918 AGGGCAGCTGACGTTACAC 60.005 57.895 20.43 0.00 0.00 2.90
4158 5155 3.955775 CGTTACACGTCCCAACCC 58.044 61.111 0.00 0.00 36.74 4.11
4159 5156 1.668793 CGTTACACGTCCCAACCCC 60.669 63.158 0.00 0.00 36.74 4.95
4160 5157 1.451072 GTTACACGTCCCAACCCCA 59.549 57.895 0.00 0.00 0.00 4.96
4161 5158 0.886043 GTTACACGTCCCAACCCCAC 60.886 60.000 0.00 0.00 0.00 4.61
4162 5159 2.054473 TTACACGTCCCAACCCCACC 62.054 60.000 0.00 0.00 0.00 4.61
4163 5160 2.968902 TACACGTCCCAACCCCACCT 62.969 60.000 0.00 0.00 0.00 4.00
4164 5161 3.566210 ACGTCCCAACCCCACCTG 61.566 66.667 0.00 0.00 0.00 4.00
4165 5162 3.566210 CGTCCCAACCCCACCTGT 61.566 66.667 0.00 0.00 0.00 4.00
4166 5163 2.115266 GTCCCAACCCCACCTGTG 59.885 66.667 0.00 0.00 0.00 3.66
4167 5164 2.039298 TCCCAACCCCACCTGTGA 60.039 61.111 0.00 0.00 0.00 3.58
4168 5165 1.465188 TCCCAACCCCACCTGTGAT 60.465 57.895 0.00 0.00 0.00 3.06
4169 5166 0.178858 TCCCAACCCCACCTGTGATA 60.179 55.000 0.00 0.00 0.00 2.15
4170 5167 0.926293 CCCAACCCCACCTGTGATAT 59.074 55.000 0.00 0.00 0.00 1.63
4171 5168 1.287739 CCCAACCCCACCTGTGATATT 59.712 52.381 0.00 0.00 0.00 1.28
4172 5169 2.292192 CCCAACCCCACCTGTGATATTT 60.292 50.000 0.00 0.00 0.00 1.40
4173 5170 3.023832 CCAACCCCACCTGTGATATTTC 58.976 50.000 0.00 0.00 0.00 2.17
4174 5171 3.563261 CCAACCCCACCTGTGATATTTCA 60.563 47.826 0.00 0.00 0.00 2.69
4193 5190 4.696078 GCATTACGCGAGACCGTA 57.304 55.556 15.93 0.00 42.20 4.02
4194 5191 2.201817 GCATTACGCGAGACCGTAC 58.798 57.895 15.93 0.00 42.68 3.67
4195 5192 1.526617 GCATTACGCGAGACCGTACG 61.527 60.000 15.93 8.69 42.68 3.67
4196 5193 0.247814 CATTACGCGAGACCGTACGT 60.248 55.000 15.93 2.02 42.68 3.57
4197 5194 1.005032 CATTACGCGAGACCGTACGTA 60.005 52.381 15.93 0.00 42.68 3.57
4198 5195 0.645355 TTACGCGAGACCGTACGTAG 59.355 55.000 15.93 1.90 42.68 3.51
4199 5196 0.457853 TACGCGAGACCGTACGTAGT 60.458 55.000 15.93 5.63 42.20 2.73
4200 5197 1.291877 ACGCGAGACCGTACGTAGTT 61.292 55.000 15.93 0.00 40.08 2.24
4201 5198 0.179215 CGCGAGACCGTACGTAGTTT 60.179 55.000 15.21 0.67 38.00 2.66
4202 5199 1.528748 GCGAGACCGTACGTAGTTTC 58.471 55.000 15.21 9.48 38.00 2.78
4203 5200 1.790696 CGAGACCGTACGTAGTTTCG 58.209 55.000 18.02 18.02 37.78 3.46
4204 5201 1.528748 GAGACCGTACGTAGTTTCGC 58.471 55.000 15.21 0.81 37.78 4.70
4205 5202 0.169009 AGACCGTACGTAGTTTCGCC 59.831 55.000 15.21 0.00 37.78 5.54
4206 5203 1.128147 GACCGTACGTAGTTTCGCCG 61.128 60.000 15.21 0.00 37.78 6.46
4207 5204 2.499603 CCGTACGTAGTTTCGCCGC 61.500 63.158 15.21 0.00 37.78 6.53
4208 5205 2.828011 CGTACGTAGTTTCGCCGCG 61.828 63.158 6.39 6.39 37.78 6.46
4209 5206 1.511887 GTACGTAGTTTCGCCGCGA 60.512 57.895 12.39 12.39 37.78 5.87
4210 5207 1.226101 TACGTAGTTTCGCCGCGAG 60.226 57.895 16.14 5.74 37.78 5.03
4211 5208 3.898640 CGTAGTTTCGCCGCGAGC 61.899 66.667 16.14 12.77 37.14 5.03
4212 5209 2.506438 GTAGTTTCGCCGCGAGCT 60.506 61.111 16.14 18.76 40.39 4.09
4213 5210 2.092882 GTAGTTTCGCCGCGAGCTT 61.093 57.895 21.34 11.95 40.39 3.74
4214 5211 0.799534 GTAGTTTCGCCGCGAGCTTA 60.800 55.000 21.34 11.13 40.39 3.09
4215 5212 0.109179 TAGTTTCGCCGCGAGCTTAA 60.109 50.000 21.34 9.76 40.39 1.85
4216 5213 0.947180 AGTTTCGCCGCGAGCTTAAA 60.947 50.000 16.14 9.87 40.39 1.52
4217 5214 0.788276 GTTTCGCCGCGAGCTTAAAC 60.788 55.000 16.14 17.04 40.39 2.01
4218 5215 1.222766 TTTCGCCGCGAGCTTAAACA 61.223 50.000 16.14 0.00 40.39 2.83
4219 5216 1.623081 TTCGCCGCGAGCTTAAACAG 61.623 55.000 16.14 0.00 40.39 3.16
4220 5217 2.380410 CGCCGCGAGCTTAAACAGT 61.380 57.895 8.23 0.00 40.39 3.55
4221 5218 1.074319 CGCCGCGAGCTTAAACAGTA 61.074 55.000 8.23 0.00 40.39 2.74
4222 5219 1.287425 GCCGCGAGCTTAAACAGTAT 58.713 50.000 8.23 0.00 38.99 2.12
4223 5220 1.258197 GCCGCGAGCTTAAACAGTATC 59.742 52.381 8.23 0.00 38.99 2.24
4224 5221 1.517276 CCGCGAGCTTAAACAGTATCG 59.483 52.381 8.23 0.00 37.08 2.92
4225 5222 1.517276 CGCGAGCTTAAACAGTATCGG 59.483 52.381 0.00 0.00 35.52 4.18
4226 5223 1.859080 GCGAGCTTAAACAGTATCGGG 59.141 52.381 0.00 0.00 35.52 5.14
4227 5224 1.859080 CGAGCTTAAACAGTATCGGGC 59.141 52.381 0.00 0.00 32.93 6.13
4228 5225 2.210961 GAGCTTAAACAGTATCGGGCC 58.789 52.381 0.00 0.00 0.00 5.80
4229 5226 0.935196 GCTTAAACAGTATCGGGCCG 59.065 55.000 22.51 22.51 0.00 6.13
4230 5227 1.578583 CTTAAACAGTATCGGGCCGG 58.421 55.000 27.98 12.18 0.00 6.13
4231 5228 0.462403 TTAAACAGTATCGGGCCGGC 60.462 55.000 27.98 21.18 0.00 6.13
4232 5229 1.332144 TAAACAGTATCGGGCCGGCT 61.332 55.000 28.56 18.52 0.00 5.52
4233 5230 2.588856 AAACAGTATCGGGCCGGCTC 62.589 60.000 28.56 24.23 0.00 4.70
4234 5231 3.536917 CAGTATCGGGCCGGCTCA 61.537 66.667 29.20 14.45 0.00 4.26
4235 5232 3.537874 AGTATCGGGCCGGCTCAC 61.538 66.667 29.20 17.77 0.00 3.51
4236 5233 3.537874 GTATCGGGCCGGCTCACT 61.538 66.667 29.20 15.46 0.00 3.41
4237 5234 3.224324 TATCGGGCCGGCTCACTC 61.224 66.667 29.20 9.42 0.00 3.51
4247 5244 3.038417 GCTCACTCGCGCACACTT 61.038 61.111 8.75 0.00 0.00 3.16
4248 5245 2.598632 GCTCACTCGCGCACACTTT 61.599 57.895 8.75 0.00 0.00 2.66
4249 5246 1.282248 GCTCACTCGCGCACACTTTA 61.282 55.000 8.75 0.00 0.00 1.85
4250 5247 1.136690 CTCACTCGCGCACACTTTAA 58.863 50.000 8.75 0.00 0.00 1.52
4251 5248 1.525197 CTCACTCGCGCACACTTTAAA 59.475 47.619 8.75 0.00 0.00 1.52
4252 5249 1.525197 TCACTCGCGCACACTTTAAAG 59.475 47.619 13.76 13.76 0.00 1.85
4253 5250 0.865769 ACTCGCGCACACTTTAAAGG 59.134 50.000 19.14 10.48 0.00 3.11
4254 5251 1.144969 CTCGCGCACACTTTAAAGGA 58.855 50.000 19.14 4.35 0.00 3.36
4255 5252 1.529438 CTCGCGCACACTTTAAAGGAA 59.471 47.619 19.14 0.00 0.00 3.36
4256 5253 1.941294 TCGCGCACACTTTAAAGGAAA 59.059 42.857 19.14 0.00 0.00 3.13
4257 5254 2.355132 TCGCGCACACTTTAAAGGAAAA 59.645 40.909 19.14 0.00 0.00 2.29
4258 5255 3.109619 CGCGCACACTTTAAAGGAAAAA 58.890 40.909 19.14 0.00 0.00 1.94
4259 5256 3.733727 CGCGCACACTTTAAAGGAAAAAT 59.266 39.130 19.14 0.00 0.00 1.82
4260 5257 4.912766 CGCGCACACTTTAAAGGAAAAATA 59.087 37.500 19.14 0.00 0.00 1.40
4261 5258 5.059221 CGCGCACACTTTAAAGGAAAAATAG 59.941 40.000 19.14 4.46 0.00 1.73
4262 5259 5.918576 GCGCACACTTTAAAGGAAAAATAGT 59.081 36.000 19.14 2.50 0.00 2.12
4263 5260 6.129194 GCGCACACTTTAAAGGAAAAATAGTG 60.129 38.462 19.14 13.31 0.00 2.74
4264 5261 7.136119 CGCACACTTTAAAGGAAAAATAGTGA 58.864 34.615 19.14 0.00 0.00 3.41
4265 5262 7.646130 CGCACACTTTAAAGGAAAAATAGTGAA 59.354 33.333 19.14 0.00 0.00 3.18
4266 5263 9.308318 GCACACTTTAAAGGAAAAATAGTGAAA 57.692 29.630 19.14 0.00 0.00 2.69
4275 5272 7.220741 AGGAAAAATAGTGAAAAAGGAGAGC 57.779 36.000 0.00 0.00 0.00 4.09
4276 5273 7.007116 AGGAAAAATAGTGAAAAAGGAGAGCT 58.993 34.615 0.00 0.00 0.00 4.09
4277 5274 7.040132 AGGAAAAATAGTGAAAAAGGAGAGCTG 60.040 37.037 0.00 0.00 0.00 4.24
4278 5275 7.255625 GGAAAAATAGTGAAAAAGGAGAGCTGT 60.256 37.037 0.00 0.00 0.00 4.40
4279 5276 6.566197 AAATAGTGAAAAAGGAGAGCTGTG 57.434 37.500 0.00 0.00 0.00 3.66
4280 5277 2.856222 AGTGAAAAAGGAGAGCTGTGG 58.144 47.619 0.00 0.00 0.00 4.17
4281 5278 1.268079 GTGAAAAAGGAGAGCTGTGGC 59.732 52.381 0.00 0.00 39.06 5.01
4291 5288 3.169198 GCTGTGGCTAACTCGTGC 58.831 61.111 0.00 0.00 35.22 5.34
4292 5289 1.667830 GCTGTGGCTAACTCGTGCA 60.668 57.895 0.00 0.00 35.22 4.57
4293 5290 1.901650 GCTGTGGCTAACTCGTGCAC 61.902 60.000 6.82 6.82 35.22 4.57
4294 5291 0.599991 CTGTGGCTAACTCGTGCACA 60.600 55.000 18.64 3.15 0.00 4.57
4295 5292 0.878523 TGTGGCTAACTCGTGCACAC 60.879 55.000 18.64 4.47 33.88 3.82
4296 5293 0.600255 GTGGCTAACTCGTGCACACT 60.600 55.000 18.64 0.00 32.07 3.55
4297 5294 0.105964 TGGCTAACTCGTGCACACTT 59.894 50.000 18.64 6.76 0.00 3.16
4298 5295 1.226746 GGCTAACTCGTGCACACTTT 58.773 50.000 18.64 8.28 0.00 2.66
4299 5296 2.224090 TGGCTAACTCGTGCACACTTTA 60.224 45.455 18.64 9.00 0.00 1.85
4300 5297 2.803956 GGCTAACTCGTGCACACTTTAA 59.196 45.455 18.64 0.00 0.00 1.52
4301 5298 3.249080 GGCTAACTCGTGCACACTTTAAA 59.751 43.478 18.64 0.00 0.00 1.52
4302 5299 4.260866 GGCTAACTCGTGCACACTTTAAAA 60.261 41.667 18.64 0.00 0.00 1.52
4303 5300 4.904154 GCTAACTCGTGCACACTTTAAAAG 59.096 41.667 18.64 4.53 0.00 2.27
4304 5301 5.277154 GCTAACTCGTGCACACTTTAAAAGA 60.277 40.000 18.64 1.27 0.00 2.52
4305 5302 5.554822 AACTCGTGCACACTTTAAAAGAA 57.445 34.783 18.64 0.00 0.00 2.52
4306 5303 5.554822 ACTCGTGCACACTTTAAAAGAAA 57.445 34.783 18.64 0.00 0.00 2.52
4307 5304 5.945155 ACTCGTGCACACTTTAAAAGAAAA 58.055 33.333 18.64 0.00 0.00 2.29
4308 5305 6.560711 ACTCGTGCACACTTTAAAAGAAAAT 58.439 32.000 18.64 0.00 0.00 1.82
4309 5306 7.699566 ACTCGTGCACACTTTAAAAGAAAATA 58.300 30.769 18.64 0.00 0.00 1.40
4310 5307 7.855904 ACTCGTGCACACTTTAAAAGAAAATAG 59.144 33.333 18.64 0.00 0.00 1.73
4311 5308 7.699566 TCGTGCACACTTTAAAAGAAAATAGT 58.300 30.769 18.64 0.00 0.00 2.12
4312 5309 8.185505 TCGTGCACACTTTAAAAGAAAATAGTT 58.814 29.630 18.64 0.00 0.00 2.24
4313 5310 8.469125 CGTGCACACTTTAAAAGAAAATAGTTC 58.531 33.333 18.64 0.00 0.00 3.01
4314 5311 9.516314 GTGCACACTTTAAAAGAAAATAGTTCT 57.484 29.630 13.17 0.00 0.00 3.01
4315 5312 9.730420 TGCACACTTTAAAAGAAAATAGTTCTC 57.270 29.630 0.00 0.00 0.00 2.87
4316 5313 8.892905 GCACACTTTAAAAGAAAATAGTTCTCG 58.107 33.333 0.00 0.00 0.00 4.04
4317 5314 8.892905 CACACTTTAAAAGAAAATAGTTCTCGC 58.107 33.333 0.00 0.00 0.00 5.03
4318 5315 8.617809 ACACTTTAAAAGAAAATAGTTCTCGCA 58.382 29.630 0.00 0.00 0.00 5.10
4319 5316 8.892905 CACTTTAAAAGAAAATAGTTCTCGCAC 58.107 33.333 0.00 0.00 0.00 5.34
4320 5317 8.617809 ACTTTAAAAGAAAATAGTTCTCGCACA 58.382 29.630 0.00 0.00 0.00 4.57
4321 5318 8.776680 TTTAAAAGAAAATAGTTCTCGCACAC 57.223 30.769 0.00 0.00 0.00 3.82
4322 5319 6.619801 AAAAGAAAATAGTTCTCGCACACT 57.380 33.333 0.00 0.00 0.00 3.55
4323 5320 6.619801 AAAGAAAATAGTTCTCGCACACTT 57.380 33.333 0.00 0.00 0.00 3.16
4324 5321 6.619801 AAGAAAATAGTTCTCGCACACTTT 57.380 33.333 0.00 0.00 0.00 2.66
4325 5322 7.724305 AAGAAAATAGTTCTCGCACACTTTA 57.276 32.000 0.00 0.00 0.00 1.85
4326 5323 7.724305 AGAAAATAGTTCTCGCACACTTTAA 57.276 32.000 0.00 0.00 0.00 1.52
4327 5324 8.149973 AGAAAATAGTTCTCGCACACTTTAAA 57.850 30.769 0.00 0.00 0.00 1.52
4328 5325 8.283291 AGAAAATAGTTCTCGCACACTTTAAAG 58.717 33.333 13.76 13.76 0.00 1.85
4329 5326 6.481954 AATAGTTCTCGCACACTTTAAAGG 57.518 37.500 19.14 10.48 0.00 3.11
4330 5327 3.805207 AGTTCTCGCACACTTTAAAGGT 58.195 40.909 19.14 11.07 0.00 3.50
4331 5328 4.196971 AGTTCTCGCACACTTTAAAGGTT 58.803 39.130 19.14 2.74 0.00 3.50
4332 5329 4.638865 AGTTCTCGCACACTTTAAAGGTTT 59.361 37.500 19.14 0.23 0.00 3.27
4333 5330 5.818857 AGTTCTCGCACACTTTAAAGGTTTA 59.181 36.000 19.14 0.00 0.00 2.01
4334 5331 6.485648 AGTTCTCGCACACTTTAAAGGTTTAT 59.514 34.615 19.14 0.00 0.00 1.40
4335 5332 6.236017 TCTCGCACACTTTAAAGGTTTATG 57.764 37.500 19.14 10.15 0.00 1.90
4336 5333 5.761234 TCTCGCACACTTTAAAGGTTTATGT 59.239 36.000 19.14 10.76 0.00 2.29
4337 5334 6.930164 TCTCGCACACTTTAAAGGTTTATGTA 59.070 34.615 19.14 0.00 0.00 2.29
4338 5335 7.117236 TCTCGCACACTTTAAAGGTTTATGTAG 59.883 37.037 19.14 10.70 0.00 2.74
4339 5336 6.707161 TCGCACACTTTAAAGGTTTATGTAGT 59.293 34.615 19.14 1.57 0.00 2.73
4340 5337 7.871973 TCGCACACTTTAAAGGTTTATGTAGTA 59.128 33.333 19.14 1.10 0.00 1.82
4341 5338 8.166706 CGCACACTTTAAAGGTTTATGTAGTAG 58.833 37.037 19.14 4.03 0.00 2.57
4342 5339 8.996271 GCACACTTTAAAGGTTTATGTAGTAGT 58.004 33.333 19.14 0.00 0.00 2.73
4344 5341 8.996271 ACACTTTAAAGGTTTATGTAGTAGTGC 58.004 33.333 19.14 0.00 0.00 4.40
4345 5342 8.166706 CACTTTAAAGGTTTATGTAGTAGTGCG 58.833 37.037 19.14 0.00 0.00 5.34
4346 5343 7.874528 ACTTTAAAGGTTTATGTAGTAGTGCGT 59.125 33.333 19.14 0.00 0.00 5.24
4347 5344 9.357652 CTTTAAAGGTTTATGTAGTAGTGCGTA 57.642 33.333 7.37 0.00 0.00 4.42
4348 5345 8.915871 TTAAAGGTTTATGTAGTAGTGCGTAG 57.084 34.615 0.00 0.00 0.00 3.51
4349 5346 6.764308 AAGGTTTATGTAGTAGTGCGTAGA 57.236 37.500 0.00 0.00 0.00 2.59
4350 5347 6.374565 AGGTTTATGTAGTAGTGCGTAGAG 57.625 41.667 0.00 0.00 0.00 2.43
4351 5348 5.884792 AGGTTTATGTAGTAGTGCGTAGAGT 59.115 40.000 0.00 0.00 0.00 3.24
4352 5349 7.050377 AGGTTTATGTAGTAGTGCGTAGAGTA 58.950 38.462 0.00 0.00 0.00 2.59
4353 5350 7.554118 AGGTTTATGTAGTAGTGCGTAGAGTAA 59.446 37.037 0.00 0.00 0.00 2.24
4354 5351 7.854916 GGTTTATGTAGTAGTGCGTAGAGTAAG 59.145 40.741 0.00 0.00 0.00 2.34
4355 5352 8.394121 GTTTATGTAGTAGTGCGTAGAGTAAGT 58.606 37.037 0.00 0.00 0.00 2.24
4356 5353 9.599866 TTTATGTAGTAGTGCGTAGAGTAAGTA 57.400 33.333 0.00 0.00 0.00 2.24
4357 5354 7.712264 ATGTAGTAGTGCGTAGAGTAAGTAG 57.288 40.000 0.00 0.00 0.00 2.57
4358 5355 5.521735 TGTAGTAGTGCGTAGAGTAAGTAGC 59.478 44.000 0.00 0.00 0.00 3.58
4359 5356 4.511527 AGTAGTGCGTAGAGTAAGTAGCA 58.488 43.478 0.00 0.00 0.00 3.49
4360 5357 5.124645 AGTAGTGCGTAGAGTAAGTAGCAT 58.875 41.667 0.00 0.00 36.96 3.79
4361 5358 6.286758 AGTAGTGCGTAGAGTAAGTAGCATA 58.713 40.000 0.00 0.00 36.96 3.14
4362 5359 6.765036 AGTAGTGCGTAGAGTAAGTAGCATAA 59.235 38.462 0.00 0.00 36.96 1.90
4363 5360 5.819059 AGTGCGTAGAGTAAGTAGCATAAC 58.181 41.667 0.00 0.00 36.96 1.89
4364 5361 4.974888 GTGCGTAGAGTAAGTAGCATAACC 59.025 45.833 0.00 0.00 36.96 2.85
4365 5362 4.641541 TGCGTAGAGTAAGTAGCATAACCA 59.358 41.667 0.00 0.00 0.00 3.67
4366 5363 4.974888 GCGTAGAGTAAGTAGCATAACCAC 59.025 45.833 0.00 0.00 0.00 4.16
4367 5364 5.449588 GCGTAGAGTAAGTAGCATAACCACA 60.450 44.000 0.00 0.00 0.00 4.17
4368 5365 6.200100 CGTAGAGTAAGTAGCATAACCACAG 58.800 44.000 0.00 0.00 0.00 3.66
4369 5366 6.037940 CGTAGAGTAAGTAGCATAACCACAGA 59.962 42.308 0.00 0.00 0.00 3.41
4370 5367 6.210287 AGAGTAAGTAGCATAACCACAGAC 57.790 41.667 0.00 0.00 0.00 3.51
4371 5368 5.952947 AGAGTAAGTAGCATAACCACAGACT 59.047 40.000 0.00 0.00 0.00 3.24
4372 5369 7.117397 AGAGTAAGTAGCATAACCACAGACTA 58.883 38.462 0.00 0.00 0.00 2.59
4373 5370 7.283580 AGAGTAAGTAGCATAACCACAGACTAG 59.716 40.741 0.00 0.00 0.00 2.57
4374 5371 5.599999 AAGTAGCATAACCACAGACTAGG 57.400 43.478 0.00 0.00 0.00 3.02
4375 5372 4.868268 AGTAGCATAACCACAGACTAGGA 58.132 43.478 0.00 0.00 0.00 2.94
4376 5373 5.269991 AGTAGCATAACCACAGACTAGGAA 58.730 41.667 0.00 0.00 0.00 3.36
4377 5374 5.720041 AGTAGCATAACCACAGACTAGGAAA 59.280 40.000 0.00 0.00 0.00 3.13
4378 5375 5.499004 AGCATAACCACAGACTAGGAAAA 57.501 39.130 0.00 0.00 0.00 2.29
4379 5376 5.246307 AGCATAACCACAGACTAGGAAAAC 58.754 41.667 0.00 0.00 0.00 2.43
4380 5377 4.092968 GCATAACCACAGACTAGGAAAACG 59.907 45.833 0.00 0.00 0.00 3.60
4381 5378 2.165319 ACCACAGACTAGGAAAACGC 57.835 50.000 0.00 0.00 0.00 4.84
4382 5379 1.270678 ACCACAGACTAGGAAAACGCC 60.271 52.381 0.00 0.00 0.00 5.68
4383 5380 1.270625 CCACAGACTAGGAAAACGCCA 60.271 52.381 0.00 0.00 0.00 5.69
4384 5381 1.798813 CACAGACTAGGAAAACGCCAC 59.201 52.381 0.00 0.00 0.00 5.01
4385 5382 1.270678 ACAGACTAGGAAAACGCCACC 60.271 52.381 0.00 0.00 0.00 4.61
4386 5383 0.037605 AGACTAGGAAAACGCCACCG 60.038 55.000 0.00 0.00 41.14 4.94
4694 5703 2.644676 TGATCGGACGACTGAATCTCT 58.355 47.619 0.00 0.00 34.89 3.10
4738 5747 4.009675 TGAACTTTGATGAGGAATTCCCG 58.990 43.478 21.22 2.56 40.87 5.14
4914 5923 1.230324 GTGAACTGCTTGGGTGACTC 58.770 55.000 0.00 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.494484 TGTGCCGCACATGATATATACTC 58.506 43.478 22.32 0.00 39.62 2.59
1 2 4.498241 CTGTGCCGCACATGATATATACT 58.502 43.478 25.89 0.00 43.71 2.12
4 5 2.038952 ACCTGTGCCGCACATGATATAT 59.961 45.455 28.73 8.90 43.71 0.86
17 18 0.181350 CTCCTCCCAATACCTGTGCC 59.819 60.000 0.00 0.00 0.00 5.01
25 26 2.039418 CACACGGATCTCCTCCCAATA 58.961 52.381 0.00 0.00 41.49 1.90
43 44 3.851845 TACGCACGCTCCACACCAC 62.852 63.158 0.00 0.00 0.00 4.16
47 56 3.299977 AGGTACGCACGCTCCACA 61.300 61.111 6.82 0.00 0.00 4.17
642 844 1.367659 GACTCCACTGCATCTGCTTC 58.632 55.000 3.53 0.00 42.66 3.86
643 845 0.390866 CGACTCCACTGCATCTGCTT 60.391 55.000 3.53 0.00 42.66 3.91
646 856 0.738762 CACCGACTCCACTGCATCTG 60.739 60.000 0.00 0.00 0.00 2.90
677 887 0.671796 TCAGTGCGTTCTTCGAAGGA 59.328 50.000 24.37 14.37 42.86 3.36
678 888 1.063806 CTCAGTGCGTTCTTCGAAGG 58.936 55.000 24.37 10.20 42.86 3.46
679 889 0.436531 GCTCAGTGCGTTCTTCGAAG 59.563 55.000 19.35 19.35 42.86 3.79
680 890 2.517598 GCTCAGTGCGTTCTTCGAA 58.482 52.632 0.00 0.00 42.86 3.71
681 891 4.245054 GCTCAGTGCGTTCTTCGA 57.755 55.556 0.00 0.00 42.86 3.71
773 985 2.791927 CGTGACTCGGATGCTCGA 59.208 61.111 0.00 0.00 37.60 4.04
833 1045 2.276740 CAATGGGAGGGAGGCACC 59.723 66.667 0.00 0.00 38.08 5.01
877 1089 3.234730 GATCGGAGGGCACGGGAT 61.235 66.667 0.00 0.00 0.00 3.85
973 1189 2.222227 AATTGCCTCCACTTCTTCCC 57.778 50.000 0.00 0.00 0.00 3.97
982 1198 0.623194 TCCGATGGAAATTGCCTCCA 59.377 50.000 3.49 1.50 46.86 3.86
986 1202 1.610522 CCATCTCCGATGGAAATTGCC 59.389 52.381 16.03 0.00 41.64 4.52
1212 1437 3.330720 ACCTTCTTGGAGGGCGGG 61.331 66.667 0.00 0.00 41.31 6.13
1230 1455 2.477525 GCAGCATAAGAAGAAGCACAGC 60.478 50.000 0.00 0.00 0.00 4.40
1236 1461 3.878103 AGCATCAGCAGCATAAGAAGAAG 59.122 43.478 0.00 0.00 45.49 2.85
1244 1469 1.890510 CGCCAGCATCAGCAGCATA 60.891 57.895 0.00 0.00 45.49 3.14
1245 1470 3.209812 CGCCAGCATCAGCAGCAT 61.210 61.111 0.00 0.00 45.49 3.79
1247 1472 3.873883 GACGCCAGCATCAGCAGC 61.874 66.667 0.00 0.00 45.49 5.25
1248 1473 2.125229 AGACGCCAGCATCAGCAG 60.125 61.111 0.00 0.00 45.49 4.24
1249 1474 2.435410 CAGACGCCAGCATCAGCA 60.435 61.111 0.00 0.00 45.49 4.41
1250 1475 3.200593 CCAGACGCCAGCATCAGC 61.201 66.667 0.00 0.00 42.56 4.26
1251 1476 0.957395 AAACCAGACGCCAGCATCAG 60.957 55.000 0.00 0.00 0.00 2.90
1252 1477 1.073025 AAACCAGACGCCAGCATCA 59.927 52.632 0.00 0.00 0.00 3.07
1253 1478 1.503542 CAAACCAGACGCCAGCATC 59.496 57.895 0.00 0.00 0.00 3.91
1254 1479 1.973281 CCAAACCAGACGCCAGCAT 60.973 57.895 0.00 0.00 0.00 3.79
1255 1480 2.594303 CCAAACCAGACGCCAGCA 60.594 61.111 0.00 0.00 0.00 4.41
1256 1481 4.043200 GCCAAACCAGACGCCAGC 62.043 66.667 0.00 0.00 0.00 4.85
1257 1482 3.726517 CGCCAAACCAGACGCCAG 61.727 66.667 0.00 0.00 0.00 4.85
1270 1495 1.819208 CATCAGAATTCGCCCGCCA 60.819 57.895 0.00 0.00 0.00 5.69
1287 1512 1.749063 ACACACACAACTCTCGACTCA 59.251 47.619 0.00 0.00 0.00 3.41
1288 1513 2.120232 CACACACACAACTCTCGACTC 58.880 52.381 0.00 0.00 0.00 3.36
1289 1514 1.802880 GCACACACACAACTCTCGACT 60.803 52.381 0.00 0.00 0.00 4.18
1291 1516 0.869880 CGCACACACACAACTCTCGA 60.870 55.000 0.00 0.00 0.00 4.04
1293 1518 1.498865 CCCGCACACACACAACTCTC 61.499 60.000 0.00 0.00 0.00 3.20
1294 1519 1.523711 CCCGCACACACACAACTCT 60.524 57.895 0.00 0.00 0.00 3.24
1295 1520 2.542907 CCCCGCACACACACAACTC 61.543 63.158 0.00 0.00 0.00 3.01
1296 1521 2.515991 CCCCGCACACACACAACT 60.516 61.111 0.00 0.00 0.00 3.16
1314 1539 2.027751 GATCTCCGGCACCTACGC 59.972 66.667 0.00 0.00 0.00 4.42
1315 1540 2.119147 CTCGATCTCCGGCACCTACG 62.119 65.000 0.00 0.00 39.14 3.51
1316 1541 0.818445 TCTCGATCTCCGGCACCTAC 60.818 60.000 0.00 0.00 39.14 3.18
1471 1707 2.816087 GAGCAATTTCCTGTCAGCAGAA 59.184 45.455 0.00 0.00 45.28 3.02
1495 1733 3.002451 CAGCAAGCAGTTCATAGCTCATC 59.998 47.826 0.00 0.00 40.90 2.92
1496 1734 2.943690 CAGCAAGCAGTTCATAGCTCAT 59.056 45.455 0.00 0.00 40.90 2.90
1514 1759 2.251600 CTGGAGACAAACCAGCAGC 58.748 57.895 0.00 0.00 46.30 5.25
1536 1781 7.094205 GCAGATTTAAATCTTTTGGAGACTCCA 60.094 37.037 24.94 20.74 43.13 3.86
1537 1782 7.121907 AGCAGATTTAAATCTTTTGGAGACTCC 59.878 37.037 24.94 15.13 42.96 3.85
1538 1783 8.049655 AGCAGATTTAAATCTTTTGGAGACTC 57.950 34.615 24.94 4.93 42.96 3.36
1539 1784 8.414629 AAGCAGATTTAAATCTTTTGGAGACT 57.585 30.769 24.94 12.48 42.96 3.24
1540 1785 8.299570 TGAAGCAGATTTAAATCTTTTGGAGAC 58.700 33.333 24.94 11.98 42.96 3.36
1541 1786 8.299570 GTGAAGCAGATTTAAATCTTTTGGAGA 58.700 33.333 24.94 6.51 42.96 3.71
1542 1787 8.302438 AGTGAAGCAGATTTAAATCTTTTGGAG 58.698 33.333 24.94 15.01 42.96 3.86
1543 1788 8.084073 CAGTGAAGCAGATTTAAATCTTTTGGA 58.916 33.333 24.94 9.27 42.96 3.53
1568 1814 0.611340 TAGCATTGCACATGGTGGCA 60.611 50.000 11.91 0.73 38.46 4.92
1657 1903 1.388547 CCAAATATGGTCACACGGGG 58.611 55.000 0.00 0.00 42.18 5.73
1672 1918 2.175202 ACTGCTTGGTTGTGTTCCAAA 58.825 42.857 0.00 0.00 43.16 3.28
1679 1925 4.930963 TGTTTGATTACTGCTTGGTTGTG 58.069 39.130 0.00 0.00 0.00 3.33
1680 1926 5.789643 ATGTTTGATTACTGCTTGGTTGT 57.210 34.783 0.00 0.00 0.00 3.32
1693 1939 9.787532 CCGTTTAGATTGTCAATATGTTTGATT 57.212 29.630 2.89 0.00 0.00 2.57
1702 1948 7.269316 TCATACTGCCGTTTAGATTGTCAATA 58.731 34.615 0.00 0.00 0.00 1.90
1719 1965 5.581126 TGAAACCATCCAATTCATACTGC 57.419 39.130 0.00 0.00 0.00 4.40
1753 1999 5.717119 TCTTCGCCGAGTTAAAGAATAAGT 58.283 37.500 0.00 0.00 0.00 2.24
1822 2076 9.053472 TCCAATAGTATTTCTAGGAGGAAACAA 57.947 33.333 0.00 0.00 37.91 2.83
1883 2137 3.761897 ACAAAAGCTGTGGCCAGTTATA 58.238 40.909 5.11 0.00 41.02 0.98
1884 2138 2.597455 ACAAAAGCTGTGGCCAGTTAT 58.403 42.857 5.11 0.00 41.02 1.89
1885 2139 2.065899 ACAAAAGCTGTGGCCAGTTA 57.934 45.000 5.11 0.00 41.02 2.24
1886 2140 2.900547 ACAAAAGCTGTGGCCAGTT 58.099 47.368 5.11 0.00 41.02 3.16
1887 2141 4.684623 ACAAAAGCTGTGGCCAGT 57.315 50.000 5.11 0.00 41.02 4.00
1894 2148 3.631686 TGTGCAAGTATCACAAAAGCTGT 59.368 39.130 0.00 0.00 41.01 4.40
1895 2149 4.227512 TGTGCAAGTATCACAAAAGCTG 57.772 40.909 0.00 0.00 41.01 4.24
1944 2198 6.928492 CCACAAGCTGTAAAATAATTTGGTGT 59.072 34.615 0.00 0.00 0.00 4.16
1947 2201 6.589907 GGTCCACAAGCTGTAAAATAATTTGG 59.410 38.462 0.00 0.00 0.00 3.28
1995 2249 1.071542 TCAATGGTCTTGCACTCCGAA 59.928 47.619 0.00 0.00 0.00 4.30
2001 2255 0.110056 CACGCTCAATGGTCTTGCAC 60.110 55.000 0.00 0.00 0.00 4.57
2100 2357 7.011857 CACCTCTAAAGAAACCAAGATCATAGC 59.988 40.741 0.00 0.00 0.00 2.97
2104 2361 6.433847 TCACCTCTAAAGAAACCAAGATCA 57.566 37.500 0.00 0.00 0.00 2.92
2199 2457 9.941325 AATTTGAACAATTGGCATAGATAAACA 57.059 25.926 10.83 0.00 0.00 2.83
2268 2529 2.167075 AGAAATAATGGTGCTGCCTTGC 59.833 45.455 0.00 0.00 38.35 4.01
2269 2530 3.194116 ACAGAAATAATGGTGCTGCCTTG 59.806 43.478 0.00 0.00 38.35 3.61
2297 2558 3.313249 TCAGTTGAGCACAAGTTGACATG 59.687 43.478 10.54 0.00 37.54 3.21
2321 2584 7.432148 AACCCATCACCTAAAAAGAGTTTTT 57.568 32.000 3.11 3.11 44.43 1.94
2464 2727 4.520492 ACAAGACTGGGAATGCTTACTTTG 59.480 41.667 0.00 0.00 0.00 2.77
2512 2775 6.003950 GCCTACTTGCCCAATATTCATAGAA 58.996 40.000 0.00 0.00 0.00 2.10
2546 2809 6.312399 TGACATTTATTTCGCACTGAAGTT 57.688 33.333 0.00 0.00 37.99 2.66
2577 2840 1.558756 CTCAGTGGCAGGGAAGAAGAT 59.441 52.381 0.00 0.00 0.00 2.40
2602 2865 1.552792 TGATTGATCACCACTACGGCA 59.447 47.619 0.00 0.00 39.03 5.69
2604 2867 3.133691 CCATGATTGATCACCACTACGG 58.866 50.000 0.00 0.00 40.03 4.02
2639 2902 6.128007 CCTCGATGCAAGTACCAAAATAAAGT 60.128 38.462 0.00 0.00 0.00 2.66
2729 2993 9.807921 AAAGACCTGGAAAGATAACAGATAAAA 57.192 29.630 0.00 0.00 34.21 1.52
2835 3099 6.478344 GTGGTCTTGTGCTCTGATCTTAATAG 59.522 42.308 0.00 0.00 0.00 1.73
2836 3100 6.070824 TGTGGTCTTGTGCTCTGATCTTAATA 60.071 38.462 0.00 0.00 0.00 0.98
2837 3101 5.181748 GTGGTCTTGTGCTCTGATCTTAAT 58.818 41.667 0.00 0.00 0.00 1.40
2838 3102 4.040339 TGTGGTCTTGTGCTCTGATCTTAA 59.960 41.667 0.00 0.00 0.00 1.85
2839 3103 3.578282 TGTGGTCTTGTGCTCTGATCTTA 59.422 43.478 0.00 0.00 0.00 2.10
2840 3104 2.369860 TGTGGTCTTGTGCTCTGATCTT 59.630 45.455 0.00 0.00 0.00 2.40
2841 3105 1.973515 TGTGGTCTTGTGCTCTGATCT 59.026 47.619 0.00 0.00 0.00 2.75
2844 3108 0.829990 TGTGTGGTCTTGTGCTCTGA 59.170 50.000 0.00 0.00 0.00 3.27
2849 3113 2.859806 GCATTTCTGTGTGGTCTTGTGC 60.860 50.000 0.00 0.00 0.00 4.57
2853 3117 3.759581 AGATGCATTTCTGTGTGGTCTT 58.240 40.909 0.00 0.00 0.00 3.01
2875 3139 2.947652 GCAGTCCAGCACACATATCAAT 59.052 45.455 0.00 0.00 0.00 2.57
2876 3140 2.026915 AGCAGTCCAGCACACATATCAA 60.027 45.455 0.00 0.00 36.85 2.57
2878 3142 1.938577 CAGCAGTCCAGCACACATATC 59.061 52.381 0.00 0.00 36.85 1.63
2879 3143 1.280133 ACAGCAGTCCAGCACACATAT 59.720 47.619 0.00 0.00 36.85 1.78
2880 3144 0.686789 ACAGCAGTCCAGCACACATA 59.313 50.000 0.00 0.00 36.85 2.29
2881 3145 0.887836 CACAGCAGTCCAGCACACAT 60.888 55.000 0.00 0.00 36.85 3.21
2882 3146 1.524393 CACAGCAGTCCAGCACACA 60.524 57.895 0.00 0.00 36.85 3.72
2883 3147 0.249868 TACACAGCAGTCCAGCACAC 60.250 55.000 0.00 0.00 36.85 3.82
2884 3148 0.033920 CTACACAGCAGTCCAGCACA 59.966 55.000 0.00 0.00 36.85 4.57
2885 3149 0.034059 ACTACACAGCAGTCCAGCAC 59.966 55.000 0.00 0.00 36.85 4.40
2886 3150 1.627864 TACTACACAGCAGTCCAGCA 58.372 50.000 0.00 0.00 36.85 4.41
2887 3151 2.743636 TTACTACACAGCAGTCCAGC 57.256 50.000 0.00 0.00 0.00 4.85
2888 3152 5.237815 TGAATTTACTACACAGCAGTCCAG 58.762 41.667 0.00 0.00 0.00 3.86
2889 3153 5.221641 ACTGAATTTACTACACAGCAGTCCA 60.222 40.000 0.00 0.00 30.22 4.02
2890 3154 5.238583 ACTGAATTTACTACACAGCAGTCC 58.761 41.667 0.00 0.00 30.22 3.85
2891 3155 6.787085 AACTGAATTTACTACACAGCAGTC 57.213 37.500 0.00 0.00 34.59 3.51
2892 3156 7.568199 AAAACTGAATTTACTACACAGCAGT 57.432 32.000 0.00 0.00 36.98 4.40
2918 3182 7.190191 TGTAATAAATTCACACACACACACAC 58.810 34.615 0.00 0.00 0.00 3.82
2920 3184 7.860373 ACATGTAATAAATTCACACACACACAC 59.140 33.333 0.00 0.00 0.00 3.82
2922 3186 8.689954 CAACATGTAATAAATTCACACACACAC 58.310 33.333 0.00 0.00 0.00 3.82
2923 3187 8.624776 TCAACATGTAATAAATTCACACACACA 58.375 29.630 0.00 0.00 0.00 3.72
2924 3188 9.624697 ATCAACATGTAATAAATTCACACACAC 57.375 29.630 0.00 0.00 0.00 3.82
2925 3189 9.623350 CATCAACATGTAATAAATTCACACACA 57.377 29.630 0.00 0.00 0.00 3.72
2926 3190 8.586273 GCATCAACATGTAATAAATTCACACAC 58.414 33.333 0.00 0.00 31.86 3.82
2927 3191 7.484324 CGCATCAACATGTAATAAATTCACACA 59.516 33.333 0.00 0.00 31.86 3.72
2928 3192 7.513505 GCGCATCAACATGTAATAAATTCACAC 60.514 37.037 0.30 0.00 31.86 3.82
2929 3193 6.471841 GCGCATCAACATGTAATAAATTCACA 59.528 34.615 0.30 0.00 31.86 3.58
2930 3194 6.471841 TGCGCATCAACATGTAATAAATTCAC 59.528 34.615 5.66 0.00 31.86 3.18
2931 3195 6.558909 TGCGCATCAACATGTAATAAATTCA 58.441 32.000 5.66 0.00 31.86 2.57
2932 3196 7.627585 ATGCGCATCAACATGTAATAAATTC 57.372 32.000 19.28 0.00 31.86 2.17
2933 3197 7.705752 TCAATGCGCATCAACATGTAATAAATT 59.294 29.630 25.53 0.00 31.86 1.82
2934 3198 7.201835 TCAATGCGCATCAACATGTAATAAAT 58.798 30.769 25.53 0.00 31.86 1.40
2935 3199 6.558909 TCAATGCGCATCAACATGTAATAAA 58.441 32.000 25.53 0.00 31.86 1.40
2943 3207 4.635833 TTGTATCAATGCGCATCAACAT 57.364 36.364 25.53 14.84 0.00 2.71
2946 3210 5.042593 GGAATTTGTATCAATGCGCATCAA 58.957 37.500 25.53 19.46 0.00 2.57
2988 3252 9.014297 ACTCCTTTCACTTATAGGAAATGTTTG 57.986 33.333 0.00 0.00 37.61 2.93
3006 3270 7.148222 GGCTGAAGGTTCTATTAAACTCCTTTC 60.148 40.741 0.00 0.00 35.76 2.62
3017 3284 4.884164 GCTTACATGGCTGAAGGTTCTATT 59.116 41.667 0.00 0.00 0.00 1.73
3047 3314 5.603170 AAATCATGCCCTGGTTTTATGAG 57.397 39.130 0.00 0.00 34.42 2.90
3111 3735 3.969117 TTTGCAGCAGACACTTAACAG 57.031 42.857 0.00 0.00 0.00 3.16
3118 3749 5.220739 CCAGATACTTATTTGCAGCAGACAC 60.221 44.000 0.00 0.00 0.00 3.67
3129 3760 8.814931 CAGATCCTCTCATCCAGATACTTATTT 58.185 37.037 0.00 0.00 0.00 1.40
3194 3825 5.102313 GGATTCGGTCCTGCAATTTTTAAG 58.898 41.667 0.00 0.00 44.16 1.85
3357 4314 2.093869 GCATGCCCTGTCATCAACAATT 60.094 45.455 6.36 0.00 37.45 2.32
3413 4378 5.048504 GCCAAAGTTGTTCTTCATCAGATCA 60.049 40.000 0.00 0.00 35.02 2.92
3443 4408 3.740631 TCTTCATCATCCTCATCACCG 57.259 47.619 0.00 0.00 0.00 4.94
3476 4441 5.695424 AGTTCTTGGGTAAGTTATCCTCC 57.305 43.478 13.43 0.00 35.38 4.30
3557 4534 7.759489 AAACATATTTGGCTGAGAAGTTACA 57.241 32.000 0.00 0.00 0.00 2.41
3606 4586 4.751767 CTGGAAGGAGCAGAGAAAGTAT 57.248 45.455 0.00 0.00 0.00 2.12
3685 4666 2.158957 TGCCGGTATCCTTGATCTGTTC 60.159 50.000 1.90 0.00 0.00 3.18
3738 4719 5.586155 TCCACCAATTCTTTACCACCTTA 57.414 39.130 0.00 0.00 0.00 2.69
3762 4743 1.734655 TCACAGGCTTCTTCTTCCCT 58.265 50.000 0.00 0.00 0.00 4.20
3779 4760 1.068333 GCTCGCTTTTGCTGGATTTCA 60.068 47.619 0.00 0.00 44.80 2.69
3780 4761 1.200948 AGCTCGCTTTTGCTGGATTTC 59.799 47.619 0.00 0.00 44.80 2.17
3830 4819 1.021390 AGAAGGTTGATGCGCCGAAG 61.021 55.000 4.18 0.00 0.00 3.79
4041 5038 8.139989 ACGTTAAAATAGTATGGCCACTAGTAG 58.860 37.037 8.16 0.00 34.59 2.57
4042 5039 7.922278 CACGTTAAAATAGTATGGCCACTAGTA 59.078 37.037 8.16 9.71 34.59 1.82
4080 5077 0.952497 CTGCCTCTCGCTTTGCTTCA 60.952 55.000 0.00 0.00 38.78 3.02
4089 5086 1.449246 ACATTGCTCTGCCTCTCGC 60.449 57.895 0.00 0.00 38.31 5.03
4112 5109 3.403057 CACAGTTGTCCGGACGCG 61.403 66.667 28.70 18.47 0.00 6.01
4116 5113 2.879233 GCCCTCACAGTTGTCCGGA 61.879 63.158 0.00 0.00 0.00 5.14
4120 5117 1.072159 AGCTGCCCTCACAGTTGTC 59.928 57.895 0.00 0.00 39.96 3.18
4121 5118 1.228063 CAGCTGCCCTCACAGTTGT 60.228 57.895 0.00 0.00 42.12 3.32
4122 5119 1.071987 TCAGCTGCCCTCACAGTTG 59.928 57.895 9.47 2.40 46.67 3.16
4123 5120 1.072159 GTCAGCTGCCCTCACAGTT 59.928 57.895 9.47 0.00 39.96 3.16
4124 5121 2.746359 GTCAGCTGCCCTCACAGT 59.254 61.111 9.47 0.00 39.96 3.55
4125 5122 2.433838 CGTCAGCTGCCCTCACAG 60.434 66.667 9.47 0.00 40.80 3.66
4126 5123 1.468506 TAACGTCAGCTGCCCTCACA 61.469 55.000 9.47 0.00 0.00 3.58
4127 5124 1.014564 GTAACGTCAGCTGCCCTCAC 61.015 60.000 9.47 0.00 0.00 3.51
4128 5125 1.292223 GTAACGTCAGCTGCCCTCA 59.708 57.895 9.47 0.00 0.00 3.86
4129 5126 1.014564 GTGTAACGTCAGCTGCCCTC 61.015 60.000 9.47 0.00 0.00 4.30
4130 5127 1.004918 GTGTAACGTCAGCTGCCCT 60.005 57.895 9.47 0.00 0.00 5.19
4131 5128 3.562635 GTGTAACGTCAGCTGCCC 58.437 61.111 9.47 0.46 0.00 5.36
4142 5139 0.886043 GTGGGGTTGGGACGTGTAAC 60.886 60.000 0.00 0.00 0.00 2.50
4143 5140 1.451072 GTGGGGTTGGGACGTGTAA 59.549 57.895 0.00 0.00 0.00 2.41
4144 5141 2.518709 GGTGGGGTTGGGACGTGTA 61.519 63.158 0.00 0.00 0.00 2.90
4145 5142 3.881104 GGTGGGGTTGGGACGTGT 61.881 66.667 0.00 0.00 0.00 4.49
4146 5143 3.566210 AGGTGGGGTTGGGACGTG 61.566 66.667 0.00 0.00 0.00 4.49
4147 5144 3.566210 CAGGTGGGGTTGGGACGT 61.566 66.667 0.00 0.00 0.00 4.34
4148 5145 3.566210 ACAGGTGGGGTTGGGACG 61.566 66.667 0.00 0.00 0.00 4.79
4149 5146 1.789576 ATCACAGGTGGGGTTGGGAC 61.790 60.000 0.00 0.00 27.81 4.46
4150 5147 0.178858 TATCACAGGTGGGGTTGGGA 60.179 55.000 0.00 0.00 0.00 4.37
4151 5148 0.926293 ATATCACAGGTGGGGTTGGG 59.074 55.000 0.00 0.00 0.00 4.12
4152 5149 2.826674 AATATCACAGGTGGGGTTGG 57.173 50.000 0.00 0.00 0.00 3.77
4153 5150 3.696045 TGAAATATCACAGGTGGGGTTG 58.304 45.455 0.00 0.00 0.00 3.77
4176 5173 1.526617 CGTACGGTCTCGCGTAATGC 61.527 60.000 7.57 0.00 40.63 3.56
4177 5174 0.247814 ACGTACGGTCTCGCGTAATG 60.248 55.000 21.06 0.00 40.63 1.90
4178 5175 1.258982 CTACGTACGGTCTCGCGTAAT 59.741 52.381 21.06 0.00 37.09 1.89
4179 5176 0.645355 CTACGTACGGTCTCGCGTAA 59.355 55.000 21.06 0.00 37.09 3.18
4180 5177 0.457853 ACTACGTACGGTCTCGCGTA 60.458 55.000 21.06 0.00 40.63 4.42
4181 5178 1.291877 AACTACGTACGGTCTCGCGT 61.292 55.000 21.06 0.00 40.63 6.01
4182 5179 0.179215 AAACTACGTACGGTCTCGCG 60.179 55.000 21.06 0.00 40.63 5.87
4183 5180 1.528748 GAAACTACGTACGGTCTCGC 58.471 55.000 21.06 0.88 40.63 5.03
4184 5181 1.790696 CGAAACTACGTACGGTCTCG 58.209 55.000 21.06 12.66 43.02 4.04
4185 5182 1.528748 GCGAAACTACGTACGGTCTC 58.471 55.000 21.06 4.09 35.59 3.36
4186 5183 0.169009 GGCGAAACTACGTACGGTCT 59.831 55.000 21.06 0.51 35.59 3.85
4187 5184 1.128147 CGGCGAAACTACGTACGGTC 61.128 60.000 21.06 7.55 34.40 4.79
4188 5185 1.154225 CGGCGAAACTACGTACGGT 60.154 57.895 21.06 5.72 34.40 4.83
4189 5186 2.499603 GCGGCGAAACTACGTACGG 61.500 63.158 21.06 5.00 36.75 4.02
4190 5187 2.828011 CGCGGCGAAACTACGTACG 61.828 63.158 19.16 15.01 38.18 3.67
4191 5188 1.458993 CTCGCGGCGAAACTACGTAC 61.459 60.000 26.28 0.00 34.74 3.67
4192 5189 1.226101 CTCGCGGCGAAACTACGTA 60.226 57.895 26.28 0.11 34.74 3.57
4193 5190 2.503375 CTCGCGGCGAAACTACGT 60.503 61.111 26.28 0.00 34.74 3.57
4194 5191 3.898640 GCTCGCGGCGAAACTACG 61.899 66.667 26.28 14.14 34.74 3.51
4203 5200 1.258197 GATACTGTTTAAGCTCGCGGC 59.742 52.381 6.13 9.11 42.19 6.53
4204 5201 1.517276 CGATACTGTTTAAGCTCGCGG 59.483 52.381 6.13 0.00 30.49 6.46
4205 5202 1.517276 CCGATACTGTTTAAGCTCGCG 59.483 52.381 0.00 0.00 34.59 5.87
4206 5203 1.859080 CCCGATACTGTTTAAGCTCGC 59.141 52.381 0.00 0.00 34.59 5.03
4207 5204 1.859080 GCCCGATACTGTTTAAGCTCG 59.141 52.381 0.00 0.00 35.30 5.03
4208 5205 2.210961 GGCCCGATACTGTTTAAGCTC 58.789 52.381 0.00 0.00 0.00 4.09
4209 5206 1.472728 CGGCCCGATACTGTTTAAGCT 60.473 52.381 0.00 0.00 0.00 3.74
4210 5207 0.935196 CGGCCCGATACTGTTTAAGC 59.065 55.000 0.00 0.00 0.00 3.09
4211 5208 1.578583 CCGGCCCGATACTGTTTAAG 58.421 55.000 3.71 0.00 0.00 1.85
4212 5209 0.462403 GCCGGCCCGATACTGTTTAA 60.462 55.000 18.11 0.00 0.00 1.52
4213 5210 1.144496 GCCGGCCCGATACTGTTTA 59.856 57.895 18.11 0.00 0.00 2.01
4214 5211 2.124860 GCCGGCCCGATACTGTTT 60.125 61.111 18.11 0.00 0.00 2.83
4215 5212 3.081409 AGCCGGCCCGATACTGTT 61.081 61.111 26.15 0.00 0.00 3.16
4216 5213 3.537874 GAGCCGGCCCGATACTGT 61.538 66.667 26.15 0.00 0.00 3.55
4217 5214 3.536917 TGAGCCGGCCCGATACTG 61.537 66.667 26.15 0.00 0.00 2.74
4218 5215 3.537874 GTGAGCCGGCCCGATACT 61.538 66.667 26.15 0.94 0.00 2.12
4219 5216 3.501458 GAGTGAGCCGGCCCGATAC 62.501 68.421 26.15 15.05 0.00 2.24
4220 5217 3.224324 GAGTGAGCCGGCCCGATA 61.224 66.667 26.15 1.58 0.00 2.92
4230 5227 1.282248 TAAAGTGTGCGCGAGTGAGC 61.282 55.000 12.10 0.00 41.80 4.26
4231 5228 1.136690 TTAAAGTGTGCGCGAGTGAG 58.863 50.000 12.10 0.00 0.00 3.51
4232 5229 1.525197 CTTTAAAGTGTGCGCGAGTGA 59.475 47.619 12.10 0.00 0.00 3.41
4233 5230 1.398451 CCTTTAAAGTGTGCGCGAGTG 60.398 52.381 12.10 0.00 0.00 3.51
4234 5231 0.865769 CCTTTAAAGTGTGCGCGAGT 59.134 50.000 12.10 0.00 0.00 4.18
4235 5232 1.144969 TCCTTTAAAGTGTGCGCGAG 58.855 50.000 12.10 0.00 0.00 5.03
4236 5233 1.584175 TTCCTTTAAAGTGTGCGCGA 58.416 45.000 12.10 0.00 0.00 5.87
4237 5234 2.392933 TTTCCTTTAAAGTGTGCGCG 57.607 45.000 14.03 0.00 0.00 6.86
4238 5235 5.918576 ACTATTTTTCCTTTAAAGTGTGCGC 59.081 36.000 14.03 0.00 0.00 6.09
4239 5236 7.136119 TCACTATTTTTCCTTTAAAGTGTGCG 58.864 34.615 14.03 0.00 0.00 5.34
4240 5237 8.865590 TTCACTATTTTTCCTTTAAAGTGTGC 57.134 30.769 14.03 0.00 0.00 4.57
4249 5246 8.144478 GCTCTCCTTTTTCACTATTTTTCCTTT 58.856 33.333 0.00 0.00 0.00 3.11
4250 5247 7.507277 AGCTCTCCTTTTTCACTATTTTTCCTT 59.493 33.333 0.00 0.00 0.00 3.36
4251 5248 7.007116 AGCTCTCCTTTTTCACTATTTTTCCT 58.993 34.615 0.00 0.00 0.00 3.36
4252 5249 7.087007 CAGCTCTCCTTTTTCACTATTTTTCC 58.913 38.462 0.00 0.00 0.00 3.13
4253 5250 7.592903 CACAGCTCTCCTTTTTCACTATTTTTC 59.407 37.037 0.00 0.00 0.00 2.29
4254 5251 7.428826 CACAGCTCTCCTTTTTCACTATTTTT 58.571 34.615 0.00 0.00 0.00 1.94
4255 5252 6.015940 CCACAGCTCTCCTTTTTCACTATTTT 60.016 38.462 0.00 0.00 0.00 1.82
4256 5253 5.474876 CCACAGCTCTCCTTTTTCACTATTT 59.525 40.000 0.00 0.00 0.00 1.40
4257 5254 5.006386 CCACAGCTCTCCTTTTTCACTATT 58.994 41.667 0.00 0.00 0.00 1.73
4258 5255 4.583871 CCACAGCTCTCCTTTTTCACTAT 58.416 43.478 0.00 0.00 0.00 2.12
4259 5256 3.807209 GCCACAGCTCTCCTTTTTCACTA 60.807 47.826 0.00 0.00 35.50 2.74
4260 5257 2.856222 CCACAGCTCTCCTTTTTCACT 58.144 47.619 0.00 0.00 0.00 3.41
4261 5258 1.268079 GCCACAGCTCTCCTTTTTCAC 59.732 52.381 0.00 0.00 35.50 3.18
4262 5259 1.609208 GCCACAGCTCTCCTTTTTCA 58.391 50.000 0.00 0.00 35.50 2.69
4274 5271 1.667830 TGCACGAGTTAGCCACAGC 60.668 57.895 0.00 0.00 40.32 4.40
4275 5272 0.599991 TGTGCACGAGTTAGCCACAG 60.600 55.000 13.13 0.00 0.00 3.66
4276 5273 0.878523 GTGTGCACGAGTTAGCCACA 60.879 55.000 13.13 0.00 34.36 4.17
4277 5274 0.600255 AGTGTGCACGAGTTAGCCAC 60.600 55.000 13.13 1.00 36.20 5.01
4278 5275 0.105964 AAGTGTGCACGAGTTAGCCA 59.894 50.000 13.13 0.00 36.20 4.75
4279 5276 1.226746 AAAGTGTGCACGAGTTAGCC 58.773 50.000 13.13 0.00 36.20 3.93
4280 5277 4.461992 TTTAAAGTGTGCACGAGTTAGC 57.538 40.909 13.13 0.00 36.20 3.09
4281 5278 6.281848 TCTTTTAAAGTGTGCACGAGTTAG 57.718 37.500 13.13 5.46 36.20 2.34
4282 5279 6.665474 TTCTTTTAAAGTGTGCACGAGTTA 57.335 33.333 13.13 7.06 36.20 2.24
4283 5280 5.554822 TTCTTTTAAAGTGTGCACGAGTT 57.445 34.783 13.13 8.07 36.20 3.01
4284 5281 5.554822 TTTCTTTTAAAGTGTGCACGAGT 57.445 34.783 13.13 1.51 36.20 4.18
4285 5282 7.855904 ACTATTTTCTTTTAAAGTGTGCACGAG 59.144 33.333 13.13 0.26 36.20 4.18
4286 5283 7.699566 ACTATTTTCTTTTAAAGTGTGCACGA 58.300 30.769 13.13 0.00 36.20 4.35
4287 5284 7.908193 ACTATTTTCTTTTAAAGTGTGCACG 57.092 32.000 13.13 0.00 36.20 5.34
4288 5285 9.516314 AGAACTATTTTCTTTTAAAGTGTGCAC 57.484 29.630 10.75 10.75 0.00 4.57
4289 5286 9.730420 GAGAACTATTTTCTTTTAAAGTGTGCA 57.270 29.630 4.53 0.00 0.00 4.57
4290 5287 8.892905 CGAGAACTATTTTCTTTTAAAGTGTGC 58.107 33.333 4.53 0.00 0.00 4.57
4291 5288 8.892905 GCGAGAACTATTTTCTTTTAAAGTGTG 58.107 33.333 4.53 0.00 0.00 3.82
4292 5289 8.617809 TGCGAGAACTATTTTCTTTTAAAGTGT 58.382 29.630 4.53 0.00 0.00 3.55
4293 5290 8.892905 GTGCGAGAACTATTTTCTTTTAAAGTG 58.107 33.333 4.53 0.00 0.00 3.16
4294 5291 8.617809 TGTGCGAGAACTATTTTCTTTTAAAGT 58.382 29.630 4.53 0.00 0.00 2.66
4295 5292 8.892905 GTGTGCGAGAACTATTTTCTTTTAAAG 58.107 33.333 0.00 0.00 0.00 1.85
4296 5293 8.617809 AGTGTGCGAGAACTATTTTCTTTTAAA 58.382 29.630 0.00 0.00 0.00 1.52
4297 5294 8.149973 AGTGTGCGAGAACTATTTTCTTTTAA 57.850 30.769 0.00 0.00 0.00 1.52
4298 5295 7.724305 AGTGTGCGAGAACTATTTTCTTTTA 57.276 32.000 0.00 0.00 0.00 1.52
4299 5296 6.619801 AGTGTGCGAGAACTATTTTCTTTT 57.380 33.333 0.00 0.00 0.00 2.27
4300 5297 6.619801 AAGTGTGCGAGAACTATTTTCTTT 57.380 33.333 0.00 0.00 0.00 2.52
4301 5298 6.619801 AAAGTGTGCGAGAACTATTTTCTT 57.380 33.333 0.00 0.00 0.00 2.52
4302 5299 7.724305 TTAAAGTGTGCGAGAACTATTTTCT 57.276 32.000 0.00 0.00 0.00 2.52
4303 5300 7.534239 CCTTTAAAGTGTGCGAGAACTATTTTC 59.466 37.037 14.03 0.00 0.00 2.29
4304 5301 7.012989 ACCTTTAAAGTGTGCGAGAACTATTTT 59.987 33.333 14.03 0.00 0.00 1.82
4305 5302 6.485648 ACCTTTAAAGTGTGCGAGAACTATTT 59.514 34.615 14.03 0.00 0.00 1.40
4306 5303 5.995897 ACCTTTAAAGTGTGCGAGAACTATT 59.004 36.000 14.03 0.00 0.00 1.73
4307 5304 5.548406 ACCTTTAAAGTGTGCGAGAACTAT 58.452 37.500 14.03 0.00 0.00 2.12
4308 5305 4.952460 ACCTTTAAAGTGTGCGAGAACTA 58.048 39.130 14.03 0.00 0.00 2.24
4309 5306 3.805207 ACCTTTAAAGTGTGCGAGAACT 58.195 40.909 14.03 0.00 0.00 3.01
4310 5307 4.547406 AACCTTTAAAGTGTGCGAGAAC 57.453 40.909 14.03 0.00 0.00 3.01
4311 5308 6.261381 ACATAAACCTTTAAAGTGTGCGAGAA 59.739 34.615 14.03 0.00 0.00 2.87
4312 5309 5.761234 ACATAAACCTTTAAAGTGTGCGAGA 59.239 36.000 14.03 0.00 0.00 4.04
4313 5310 5.997385 ACATAAACCTTTAAAGTGTGCGAG 58.003 37.500 14.03 0.00 0.00 5.03
4314 5311 6.707161 ACTACATAAACCTTTAAAGTGTGCGA 59.293 34.615 14.03 2.48 0.00 5.10
4315 5312 6.894828 ACTACATAAACCTTTAAAGTGTGCG 58.105 36.000 14.03 9.05 0.00 5.34
4316 5313 8.996271 ACTACTACATAAACCTTTAAAGTGTGC 58.004 33.333 14.03 0.00 0.00 4.57
4318 5315 8.996271 GCACTACTACATAAACCTTTAAAGTGT 58.004 33.333 14.03 12.70 0.00 3.55
4319 5316 8.166706 CGCACTACTACATAAACCTTTAAAGTG 58.833 37.037 14.03 7.69 0.00 3.16
4320 5317 7.874528 ACGCACTACTACATAAACCTTTAAAGT 59.125 33.333 14.03 0.00 0.00 2.66
4321 5318 8.248117 ACGCACTACTACATAAACCTTTAAAG 57.752 34.615 8.32 8.32 0.00 1.85
4322 5319 9.357652 CTACGCACTACTACATAAACCTTTAAA 57.642 33.333 0.00 0.00 0.00 1.52
4323 5320 8.739039 TCTACGCACTACTACATAAACCTTTAA 58.261 33.333 0.00 0.00 0.00 1.52
4324 5321 8.279970 TCTACGCACTACTACATAAACCTTTA 57.720 34.615 0.00 0.00 0.00 1.85
4325 5322 7.094032 ACTCTACGCACTACTACATAAACCTTT 60.094 37.037 0.00 0.00 0.00 3.11
4326 5323 6.376581 ACTCTACGCACTACTACATAAACCTT 59.623 38.462 0.00 0.00 0.00 3.50
4327 5324 5.884792 ACTCTACGCACTACTACATAAACCT 59.115 40.000 0.00 0.00 0.00 3.50
4328 5325 6.129053 ACTCTACGCACTACTACATAAACC 57.871 41.667 0.00 0.00 0.00 3.27
4329 5326 8.394121 ACTTACTCTACGCACTACTACATAAAC 58.606 37.037 0.00 0.00 0.00 2.01
4330 5327 8.498054 ACTTACTCTACGCACTACTACATAAA 57.502 34.615 0.00 0.00 0.00 1.40
4331 5328 9.254133 CTACTTACTCTACGCACTACTACATAA 57.746 37.037 0.00 0.00 0.00 1.90
4332 5329 7.383572 GCTACTTACTCTACGCACTACTACATA 59.616 40.741 0.00 0.00 0.00 2.29
4333 5330 6.202570 GCTACTTACTCTACGCACTACTACAT 59.797 42.308 0.00 0.00 0.00 2.29
4334 5331 5.521735 GCTACTTACTCTACGCACTACTACA 59.478 44.000 0.00 0.00 0.00 2.74
4335 5332 5.521735 TGCTACTTACTCTACGCACTACTAC 59.478 44.000 0.00 0.00 0.00 2.73
4336 5333 5.664457 TGCTACTTACTCTACGCACTACTA 58.336 41.667 0.00 0.00 0.00 1.82
4337 5334 4.511527 TGCTACTTACTCTACGCACTACT 58.488 43.478 0.00 0.00 0.00 2.57
4338 5335 4.871993 TGCTACTTACTCTACGCACTAC 57.128 45.455 0.00 0.00 0.00 2.73
4339 5336 6.017605 GGTTATGCTACTTACTCTACGCACTA 60.018 42.308 0.00 0.00 0.00 2.74
4340 5337 5.221009 GGTTATGCTACTTACTCTACGCACT 60.221 44.000 0.00 0.00 0.00 4.40
4341 5338 4.974888 GGTTATGCTACTTACTCTACGCAC 59.025 45.833 0.00 0.00 0.00 5.34
4342 5339 4.641541 TGGTTATGCTACTTACTCTACGCA 59.358 41.667 0.00 0.00 0.00 5.24
4343 5340 4.974888 GTGGTTATGCTACTTACTCTACGC 59.025 45.833 0.00 0.00 0.00 4.42
4344 5341 6.037940 TCTGTGGTTATGCTACTTACTCTACG 59.962 42.308 0.00 0.00 0.00 3.51
4345 5342 7.067251 AGTCTGTGGTTATGCTACTTACTCTAC 59.933 40.741 0.00 0.00 0.00 2.59
4346 5343 7.117397 AGTCTGTGGTTATGCTACTTACTCTA 58.883 38.462 0.00 0.00 0.00 2.43
4347 5344 5.952947 AGTCTGTGGTTATGCTACTTACTCT 59.047 40.000 0.00 0.00 0.00 3.24
4348 5345 6.210287 AGTCTGTGGTTATGCTACTTACTC 57.790 41.667 0.00 0.00 0.00 2.59
4349 5346 6.321690 CCTAGTCTGTGGTTATGCTACTTACT 59.678 42.308 0.00 0.00 32.47 2.24
4350 5347 6.320672 TCCTAGTCTGTGGTTATGCTACTTAC 59.679 42.308 0.00 0.00 0.00 2.34
4351 5348 6.429151 TCCTAGTCTGTGGTTATGCTACTTA 58.571 40.000 0.00 0.00 0.00 2.24
4352 5349 5.269991 TCCTAGTCTGTGGTTATGCTACTT 58.730 41.667 0.00 0.00 0.00 2.24
4353 5350 4.868268 TCCTAGTCTGTGGTTATGCTACT 58.132 43.478 0.00 0.00 0.00 2.57
4354 5351 5.593679 TTCCTAGTCTGTGGTTATGCTAC 57.406 43.478 0.00 0.00 0.00 3.58
4355 5352 6.403878 GTTTTCCTAGTCTGTGGTTATGCTA 58.596 40.000 0.00 0.00 0.00 3.49
4356 5353 5.246307 GTTTTCCTAGTCTGTGGTTATGCT 58.754 41.667 0.00 0.00 0.00 3.79
4357 5354 4.092968 CGTTTTCCTAGTCTGTGGTTATGC 59.907 45.833 0.00 0.00 0.00 3.14
4358 5355 4.092968 GCGTTTTCCTAGTCTGTGGTTATG 59.907 45.833 0.00 0.00 0.00 1.90
4359 5356 4.251268 GCGTTTTCCTAGTCTGTGGTTAT 58.749 43.478 0.00 0.00 0.00 1.89
4360 5357 3.555586 GGCGTTTTCCTAGTCTGTGGTTA 60.556 47.826 0.00 0.00 0.00 2.85
4361 5358 2.490991 GCGTTTTCCTAGTCTGTGGTT 58.509 47.619 0.00 0.00 0.00 3.67
4362 5359 1.270678 GGCGTTTTCCTAGTCTGTGGT 60.271 52.381 0.00 0.00 0.00 4.16
4363 5360 1.270625 TGGCGTTTTCCTAGTCTGTGG 60.271 52.381 0.00 0.00 0.00 4.17
4364 5361 1.798813 GTGGCGTTTTCCTAGTCTGTG 59.201 52.381 0.00 0.00 0.00 3.66
4365 5362 1.270678 GGTGGCGTTTTCCTAGTCTGT 60.271 52.381 0.00 0.00 0.00 3.41
4366 5363 1.439679 GGTGGCGTTTTCCTAGTCTG 58.560 55.000 0.00 0.00 0.00 3.51
4367 5364 0.037605 CGGTGGCGTTTTCCTAGTCT 60.038 55.000 0.00 0.00 0.00 3.24
4368 5365 0.320160 ACGGTGGCGTTTTCCTAGTC 60.320 55.000 0.00 0.00 0.00 2.59
4369 5366 0.601841 CACGGTGGCGTTTTCCTAGT 60.602 55.000 0.00 0.00 0.00 2.57
4370 5367 0.320073 TCACGGTGGCGTTTTCCTAG 60.320 55.000 8.50 0.00 0.00 3.02
4371 5368 0.322322 ATCACGGTGGCGTTTTCCTA 59.678 50.000 8.50 0.00 0.00 2.94
4372 5369 0.953960 GATCACGGTGGCGTTTTCCT 60.954 55.000 8.50 0.00 0.00 3.36
4373 5370 0.953960 AGATCACGGTGGCGTTTTCC 60.954 55.000 8.50 0.00 0.00 3.13
4374 5371 0.872388 AAGATCACGGTGGCGTTTTC 59.128 50.000 8.50 0.00 0.00 2.29
4375 5372 0.872388 GAAGATCACGGTGGCGTTTT 59.128 50.000 8.50 0.00 0.00 2.43
4376 5373 0.953960 GGAAGATCACGGTGGCGTTT 60.954 55.000 8.50 0.00 0.00 3.60
4377 5374 1.375523 GGAAGATCACGGTGGCGTT 60.376 57.895 8.50 0.00 0.00 4.84
4378 5375 2.264794 GGAAGATCACGGTGGCGT 59.735 61.111 8.50 0.00 0.00 5.68
4379 5376 2.511600 GGGAAGATCACGGTGGCG 60.512 66.667 8.50 0.00 0.00 5.69
4380 5377 2.124695 GGGGAAGATCACGGTGGC 60.125 66.667 8.50 1.07 0.00 5.01
4381 5378 1.221840 CAGGGGAAGATCACGGTGG 59.778 63.158 8.50 0.00 0.00 4.61
4382 5379 1.221840 CCAGGGGAAGATCACGGTG 59.778 63.158 0.56 0.56 0.00 4.94
4383 5380 2.670148 GCCAGGGGAAGATCACGGT 61.670 63.158 0.00 0.00 0.00 4.83
4384 5381 2.190578 GCCAGGGGAAGATCACGG 59.809 66.667 0.00 0.00 0.00 4.94
4385 5382 2.202932 CGCCAGGGGAAGATCACG 60.203 66.667 0.00 0.00 0.00 4.35
4386 5383 2.190578 CCGCCAGGGGAAGATCAC 59.809 66.667 4.70 0.00 0.00 3.06
4387 5384 3.797353 GCCGCCAGGGGAAGATCA 61.797 66.667 4.70 0.00 38.20 2.92
4694 5703 5.610557 TCAGATCATCCTCTTCTCTCTCCTA 59.389 44.000 0.00 0.00 0.00 2.94
4738 5747 1.556911 TCAGCTTCCTCCACTTCATCC 59.443 52.381 0.00 0.00 0.00 3.51
4807 5816 7.606349 CCATCTTCATCGTATCATAGAAGGAA 58.394 38.462 0.00 0.00 37.04 3.36
4914 5923 1.418908 ATAACCATGGCCCCTCCTCG 61.419 60.000 13.04 0.00 35.26 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.