Multiple sequence alignment - TraesCS7D01G096200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G096200 chr7D 100.000 2570 0 0 1001 3570 58497247 58494678 0.000000e+00 4747.0
1 TraesCS7D01G096200 chr7D 100.000 564 0 0 1 564 58498247 58497684 0.000000e+00 1042.0
2 TraesCS7D01G096200 chr7D 93.863 277 17 0 76 352 282878112 282878388 5.510000e-113 418.0
3 TraesCS7D01G096200 chr7A 87.046 1019 71 25 1774 2770 62850465 62849486 0.000000e+00 1094.0
4 TraesCS7D01G096200 chr7A 94.555 551 19 5 3023 3570 62848999 62848457 0.000000e+00 841.0
5 TraesCS7D01G096200 chr7A 85.047 535 49 15 1013 1530 62851158 62850638 1.900000e-142 516.0
6 TraesCS7D01G096200 chr7A 93.525 278 17 1 74 350 696328537 696328260 2.560000e-111 412.0
7 TraesCS7D01G096200 chr7A 88.945 199 12 5 371 563 62851734 62851540 1.660000e-58 237.0
8 TraesCS7D01G096200 chr7A 88.945 199 12 5 371 563 62857201 62857007 1.660000e-58 237.0
9 TraesCS7D01G096200 chr7A 88.945 199 12 5 371 563 62861391 62861197 1.660000e-58 237.0
10 TraesCS7D01G096200 chr7A 94.915 59 3 0 2718 2776 62849484 62849426 3.790000e-15 93.5
11 TraesCS7D01G096200 chr4A 87.668 819 56 22 1779 2568 674944359 674943557 0.000000e+00 911.0
12 TraesCS7D01G096200 chr4A 92.376 564 24 9 3018 3570 674942937 674942382 0.000000e+00 785.0
13 TraesCS7D01G096200 chr4A 87.646 429 39 8 1001 1419 674945081 674944657 1.490000e-133 486.0
14 TraesCS7D01G096200 chr4A 89.720 214 13 7 353 564 674945393 674945187 7.600000e-67 265.0
15 TraesCS7D01G096200 chr4A 86.792 106 10 3 1699 1804 715904519 715904418 8.100000e-22 115.0
16 TraesCS7D01G096200 chr5B 95.238 273 12 1 76 348 320411184 320410913 7.080000e-117 431.0
17 TraesCS7D01G096200 chr4D 94.485 272 14 1 76 346 437030173 437030444 5.510000e-113 418.0
18 TraesCS7D01G096200 chr4D 91.579 95 6 2 1691 1783 21147722 21147816 2.890000e-26 130.0
19 TraesCS7D01G096200 chr6A 92.491 293 18 3 56 348 319238084 319238372 1.980000e-112 416.0
20 TraesCS7D01G096200 chr6A 93.258 89 6 0 1695 1783 112005006 112005094 8.040000e-27 132.0
21 TraesCS7D01G096200 chr5A 93.571 280 17 1 76 354 632012436 632012715 1.980000e-112 416.0
22 TraesCS7D01G096200 chr2D 93.885 278 14 3 76 352 170627876 170628151 1.980000e-112 416.0
23 TraesCS7D01G096200 chr2D 95.238 84 4 0 1699 1782 556927093 556927010 2.240000e-27 134.0
24 TraesCS7D01G096200 chr2D 89.000 100 10 1 1684 1783 336511120 336511218 4.840000e-24 122.0
25 TraesCS7D01G096200 chr6D 93.571 280 13 4 74 350 131976982 131977259 2.560000e-111 412.0
26 TraesCS7D01G096200 chr3D 93.238 281 18 1 69 348 145199646 145199366 2.560000e-111 412.0
27 TraesCS7D01G096200 chr3D 87.736 106 9 3 1699 1804 526462571 526462470 1.740000e-23 121.0
28 TraesCS7D01G096200 chr3D 84.946 93 12 2 1695 1786 10669956 10669865 3.790000e-15 93.5
29 TraesCS7D01G096200 chr6B 95.294 85 4 0 1699 1783 172715900 172715816 6.220000e-28 135.0
30 TraesCS7D01G096200 chr6B 83.871 93 10 2 1699 1788 534090328 534090418 2.280000e-12 84.2
31 TraesCS7D01G096200 chr4B 95.294 85 4 0 1699 1783 28724304 28724220 6.220000e-28 135.0
32 TraesCS7D01G096200 chrUn 96.296 81 3 0 1699 1779 95767450 95767530 2.240000e-27 134.0
33 TraesCS7D01G096200 chr3B 94.186 86 5 0 1698 1783 552226406 552226491 8.040000e-27 132.0
34 TraesCS7D01G096200 chr3B 87.097 93 8 3 1712 1804 119469522 119469434 6.310000e-18 102.0
35 TraesCS7D01G096200 chr3A 84.946 93 13 1 1695 1786 17595561 17595653 3.790000e-15 93.5
36 TraesCS7D01G096200 chr2A 94.595 37 2 0 1750 1786 527922738 527922702 1.380000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G096200 chr7D 58494678 58498247 3569 True 2894.50 4747 100.0000 1 3570 2 chr7D.!!$R1 3569
1 TraesCS7D01G096200 chr7A 62848457 62851734 3277 True 556.30 1094 90.1016 371 3570 5 chr7A.!!$R2 3199
2 TraesCS7D01G096200 chr7A 62857007 62861391 4384 True 237.00 237 88.9450 371 563 2 chr7A.!!$R3 192
3 TraesCS7D01G096200 chr4A 674942382 674945393 3011 True 611.75 911 89.3525 353 3570 4 chr4A.!!$R2 3217

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
140 141 0.031716 TGATGAGGTGGAGGGGAGAG 60.032 60.0 0.00 0.0 0.00 3.20 F
144 145 0.041982 GAGGTGGAGGGGAGAGAACT 59.958 60.0 0.00 0.0 0.00 3.01 F
146 147 0.252284 GGTGGAGGGGAGAGAACTCA 60.252 60.0 4.64 0.0 44.22 3.41 F
537 544 0.466124 CTCCCGACCCAAAGATCTCC 59.534 60.0 0.00 0.0 0.00 3.71 F
1088 1095 0.908198 GCTTGTCCTCCTCATCCAGT 59.092 55.0 0.00 0.0 0.00 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1602 1697 0.328592 AGTCTACTGCCTCCGTCTCA 59.671 55.0 0.00 0.0 0.00 3.27 R
2026 2122 0.609662 GCAAATCCATGGCAGGTTGT 59.390 50.0 6.96 0.0 0.00 3.32 R
2031 2127 0.744874 CTCCAGCAAATCCATGGCAG 59.255 55.0 6.96 0.0 33.92 4.85 R
2340 2441 1.043022 ACCGTTTACTGAGGAACCGT 58.957 50.0 0.00 0.0 0.00 4.83 R
3012 3761 0.037975 CTGGAAATGGGCTTGTGTGC 60.038 55.0 0.00 0.0 0.00 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 3.555518 GCACAAGCTTAAAGAAAGGACG 58.444 45.455 0.00 0.00 37.91 4.79
30 31 3.003378 GCACAAGCTTAAAGAAAGGACGT 59.997 43.478 0.00 0.00 37.91 4.34
31 32 4.773510 CACAAGCTTAAAGAAAGGACGTC 58.226 43.478 7.13 7.13 35.58 4.34
32 33 4.272504 CACAAGCTTAAAGAAAGGACGTCA 59.727 41.667 18.91 0.00 35.58 4.35
33 34 5.049405 CACAAGCTTAAAGAAAGGACGTCAT 60.049 40.000 18.91 7.60 35.58 3.06
34 35 5.531287 ACAAGCTTAAAGAAAGGACGTCATT 59.469 36.000 18.91 14.64 35.58 2.57
35 36 6.708949 ACAAGCTTAAAGAAAGGACGTCATTA 59.291 34.615 16.71 0.00 35.58 1.90
36 37 7.390718 ACAAGCTTAAAGAAAGGACGTCATTAT 59.609 33.333 16.71 5.32 35.58 1.28
37 38 7.308782 AGCTTAAAGAAAGGACGTCATTATG 57.691 36.000 16.71 3.78 35.58 1.90
38 39 7.103641 AGCTTAAAGAAAGGACGTCATTATGA 58.896 34.615 16.71 0.00 35.58 2.15
39 40 7.770897 AGCTTAAAGAAAGGACGTCATTATGAT 59.229 33.333 16.71 0.00 35.58 2.45
40 41 8.398665 GCTTAAAGAAAGGACGTCATTATGATT 58.601 33.333 16.71 11.22 35.58 2.57
44 45 9.449719 AAAGAAAGGACGTCATTATGATTAGTT 57.550 29.630 16.71 0.00 0.00 2.24
74 75 5.676532 TGGTGACAAAATTTAGTACCGTG 57.323 39.130 0.00 0.00 37.44 4.94
75 76 5.366460 TGGTGACAAAATTTAGTACCGTGA 58.634 37.500 0.00 0.00 37.44 4.35
76 77 5.467399 TGGTGACAAAATTTAGTACCGTGAG 59.533 40.000 0.00 0.00 37.44 3.51
90 91 1.016627 CGTGAGGGCATGTACAATGG 58.983 55.000 0.00 0.00 0.00 3.16
91 92 1.678728 CGTGAGGGCATGTACAATGGT 60.679 52.381 0.00 0.00 0.00 3.55
92 93 1.745087 GTGAGGGCATGTACAATGGTG 59.255 52.381 0.00 0.00 0.00 4.17
93 94 0.740737 GAGGGCATGTACAATGGTGC 59.259 55.000 10.12 10.12 36.88 5.01
94 95 0.332632 AGGGCATGTACAATGGTGCT 59.667 50.000 16.47 0.00 37.70 4.40
95 96 1.563879 AGGGCATGTACAATGGTGCTA 59.436 47.619 16.47 0.00 37.70 3.49
96 97 2.175499 AGGGCATGTACAATGGTGCTAT 59.825 45.455 16.47 5.35 37.70 2.97
97 98 2.554032 GGGCATGTACAATGGTGCTATC 59.446 50.000 16.47 3.12 37.70 2.08
98 99 3.480470 GGCATGTACAATGGTGCTATCT 58.520 45.455 16.47 0.00 37.70 1.98
99 100 3.885297 GGCATGTACAATGGTGCTATCTT 59.115 43.478 16.47 0.00 37.70 2.40
100 101 5.063204 GGCATGTACAATGGTGCTATCTTA 58.937 41.667 16.47 0.00 37.70 2.10
101 102 5.180117 GGCATGTACAATGGTGCTATCTTAG 59.820 44.000 16.47 0.00 37.70 2.18
102 103 5.180117 GCATGTACAATGGTGCTATCTTAGG 59.820 44.000 11.12 0.00 34.85 2.69
103 104 6.524734 CATGTACAATGGTGCTATCTTAGGA 58.475 40.000 0.00 0.00 0.00 2.94
104 105 6.161855 TGTACAATGGTGCTATCTTAGGAG 57.838 41.667 0.00 0.00 0.00 3.69
105 106 5.661312 TGTACAATGGTGCTATCTTAGGAGT 59.339 40.000 0.00 0.00 0.00 3.85
106 107 5.028549 ACAATGGTGCTATCTTAGGAGTG 57.971 43.478 0.00 0.00 0.00 3.51
107 108 3.760580 ATGGTGCTATCTTAGGAGTGC 57.239 47.619 0.00 0.00 0.00 4.40
108 109 1.762957 TGGTGCTATCTTAGGAGTGCC 59.237 52.381 0.70 0.00 0.00 5.01
109 110 1.762957 GGTGCTATCTTAGGAGTGCCA 59.237 52.381 0.00 0.00 36.29 4.92
110 111 2.370189 GGTGCTATCTTAGGAGTGCCAT 59.630 50.000 0.00 0.00 36.29 4.40
111 112 3.397482 GTGCTATCTTAGGAGTGCCATG 58.603 50.000 0.00 0.00 36.29 3.66
112 113 3.041211 TGCTATCTTAGGAGTGCCATGT 58.959 45.455 0.00 0.00 36.29 3.21
113 114 4.039245 GTGCTATCTTAGGAGTGCCATGTA 59.961 45.833 0.00 0.00 36.29 2.29
114 115 4.281941 TGCTATCTTAGGAGTGCCATGTAG 59.718 45.833 0.00 0.00 36.29 2.74
115 116 4.322349 GCTATCTTAGGAGTGCCATGTAGG 60.322 50.000 0.00 0.00 41.84 3.18
116 117 3.398318 TCTTAGGAGTGCCATGTAGGA 57.602 47.619 0.00 0.00 41.22 2.94
117 118 3.928754 TCTTAGGAGTGCCATGTAGGAT 58.071 45.455 0.00 0.00 41.22 3.24
118 119 5.074746 TCTTAGGAGTGCCATGTAGGATA 57.925 43.478 0.00 0.00 41.22 2.59
119 120 5.464069 TCTTAGGAGTGCCATGTAGGATAA 58.536 41.667 0.00 0.00 41.22 1.75
120 121 5.903010 TCTTAGGAGTGCCATGTAGGATAAA 59.097 40.000 0.00 0.00 41.22 1.40
121 122 6.558775 TCTTAGGAGTGCCATGTAGGATAAAT 59.441 38.462 0.00 0.00 41.22 1.40
122 123 4.978099 AGGAGTGCCATGTAGGATAAATG 58.022 43.478 0.00 0.00 41.22 2.32
123 124 4.660303 AGGAGTGCCATGTAGGATAAATGA 59.340 41.667 0.00 0.00 38.63 2.57
124 125 5.311649 AGGAGTGCCATGTAGGATAAATGAT 59.688 40.000 0.00 0.00 38.63 2.45
125 126 5.413833 GGAGTGCCATGTAGGATAAATGATG 59.586 44.000 0.00 0.00 38.63 3.07
126 127 6.191657 AGTGCCATGTAGGATAAATGATGA 57.808 37.500 0.00 0.00 38.63 2.92
127 128 6.236409 AGTGCCATGTAGGATAAATGATGAG 58.764 40.000 0.00 0.00 38.63 2.90
128 129 5.413833 GTGCCATGTAGGATAAATGATGAGG 59.586 44.000 0.00 0.00 38.63 3.86
129 130 5.073554 TGCCATGTAGGATAAATGATGAGGT 59.926 40.000 0.00 0.00 38.63 3.85
130 131 5.413833 GCCATGTAGGATAAATGATGAGGTG 59.586 44.000 0.00 0.00 38.63 4.00
131 132 5.942236 CCATGTAGGATAAATGATGAGGTGG 59.058 44.000 0.00 0.00 38.63 4.61
132 133 6.239973 CCATGTAGGATAAATGATGAGGTGGA 60.240 42.308 0.00 0.00 38.63 4.02
133 134 6.425210 TGTAGGATAAATGATGAGGTGGAG 57.575 41.667 0.00 0.00 0.00 3.86
134 135 4.989875 AGGATAAATGATGAGGTGGAGG 57.010 45.455 0.00 0.00 0.00 4.30
135 136 3.654806 AGGATAAATGATGAGGTGGAGGG 59.345 47.826 0.00 0.00 0.00 4.30
136 137 3.245052 GGATAAATGATGAGGTGGAGGGG 60.245 52.174 0.00 0.00 0.00 4.79
137 138 1.985622 AAATGATGAGGTGGAGGGGA 58.014 50.000 0.00 0.00 0.00 4.81
138 139 1.516110 AATGATGAGGTGGAGGGGAG 58.484 55.000 0.00 0.00 0.00 4.30
139 140 0.644380 ATGATGAGGTGGAGGGGAGA 59.356 55.000 0.00 0.00 0.00 3.71
140 141 0.031716 TGATGAGGTGGAGGGGAGAG 60.032 60.000 0.00 0.00 0.00 3.20
141 142 0.263172 GATGAGGTGGAGGGGAGAGA 59.737 60.000 0.00 0.00 0.00 3.10
142 143 0.719015 ATGAGGTGGAGGGGAGAGAA 59.281 55.000 0.00 0.00 0.00 2.87
143 144 0.252284 TGAGGTGGAGGGGAGAGAAC 60.252 60.000 0.00 0.00 0.00 3.01
144 145 0.041982 GAGGTGGAGGGGAGAGAACT 59.958 60.000 0.00 0.00 0.00 3.01
145 146 0.041982 AGGTGGAGGGGAGAGAACTC 59.958 60.000 0.00 0.00 41.94 3.01
146 147 0.252284 GGTGGAGGGGAGAGAACTCA 60.252 60.000 4.64 0.00 44.22 3.41
147 148 1.623834 GGTGGAGGGGAGAGAACTCAT 60.624 57.143 4.64 0.00 44.22 2.90
148 149 2.359355 GGTGGAGGGGAGAGAACTCATA 60.359 54.545 4.64 0.00 44.22 2.15
149 150 3.375699 GTGGAGGGGAGAGAACTCATAA 58.624 50.000 4.64 0.00 44.22 1.90
150 151 3.386402 GTGGAGGGGAGAGAACTCATAAG 59.614 52.174 4.64 0.00 44.22 1.73
151 152 3.272285 TGGAGGGGAGAGAACTCATAAGA 59.728 47.826 4.64 0.00 44.22 2.10
152 153 4.264850 TGGAGGGGAGAGAACTCATAAGAA 60.265 45.833 4.64 0.00 44.22 2.52
153 154 4.717280 GGAGGGGAGAGAACTCATAAGAAA 59.283 45.833 4.64 0.00 44.22 2.52
154 155 5.189934 GGAGGGGAGAGAACTCATAAGAAAA 59.810 44.000 4.64 0.00 44.22 2.29
155 156 6.306643 AGGGGAGAGAACTCATAAGAAAAG 57.693 41.667 4.64 0.00 44.22 2.27
156 157 6.026186 AGGGGAGAGAACTCATAAGAAAAGA 58.974 40.000 4.64 0.00 44.22 2.52
157 158 6.070481 AGGGGAGAGAACTCATAAGAAAAGAC 60.070 42.308 4.64 0.00 44.22 3.01
158 159 6.070481 GGGGAGAGAACTCATAAGAAAAGACT 60.070 42.308 4.64 0.00 44.22 3.24
159 160 7.390823 GGGAGAGAACTCATAAGAAAAGACTT 58.609 38.462 4.64 0.00 44.22 3.01
160 161 7.333174 GGGAGAGAACTCATAAGAAAAGACTTG 59.667 40.741 4.64 0.00 44.22 3.16
161 162 7.875554 GGAGAGAACTCATAAGAAAAGACTTGT 59.124 37.037 4.64 0.00 44.22 3.16
162 163 8.825667 AGAGAACTCATAAGAAAAGACTTGTC 57.174 34.615 0.00 0.00 0.00 3.18
163 164 8.646900 AGAGAACTCATAAGAAAAGACTTGTCT 58.353 33.333 1.69 1.69 0.00 3.41
164 165 9.267084 GAGAACTCATAAGAAAAGACTTGTCTT 57.733 33.333 21.59 21.59 35.77 3.01
165 166 9.267084 AGAACTCATAAGAAAAGACTTGTCTTC 57.733 33.333 21.53 8.09 33.70 2.87
166 167 9.267084 GAACTCATAAGAAAAGACTTGTCTTCT 57.733 33.333 21.53 11.28 33.70 2.85
167 168 8.825667 ACTCATAAGAAAAGACTTGTCTTCTC 57.174 34.615 21.53 11.71 33.70 2.87
168 169 8.646900 ACTCATAAGAAAAGACTTGTCTTCTCT 58.353 33.333 21.53 13.63 33.70 3.10
169 170 9.487790 CTCATAAGAAAAGACTTGTCTTCTCTT 57.512 33.333 25.61 25.61 39.50 2.85
211 212 8.464770 GAGATGATCTCTTAGCACAATATGTC 57.535 38.462 14.98 0.00 40.30 3.06
212 213 8.192743 AGATGATCTCTTAGCACAATATGTCT 57.807 34.615 0.00 0.00 0.00 3.41
213 214 8.306038 AGATGATCTCTTAGCACAATATGTCTC 58.694 37.037 0.00 0.00 0.00 3.36
214 215 7.352079 TGATCTCTTAGCACAATATGTCTCA 57.648 36.000 0.00 0.00 0.00 3.27
215 216 7.205992 TGATCTCTTAGCACAATATGTCTCAC 58.794 38.462 0.00 0.00 0.00 3.51
216 217 5.907207 TCTCTTAGCACAATATGTCTCACC 58.093 41.667 0.00 0.00 0.00 4.02
217 218 5.422012 TCTCTTAGCACAATATGTCTCACCA 59.578 40.000 0.00 0.00 0.00 4.17
218 219 6.098838 TCTCTTAGCACAATATGTCTCACCAT 59.901 38.462 0.00 0.00 0.00 3.55
219 220 6.051074 TCTTAGCACAATATGTCTCACCATG 58.949 40.000 0.00 0.00 0.00 3.66
220 221 4.226427 AGCACAATATGTCTCACCATGT 57.774 40.909 0.00 0.00 0.00 3.21
221 222 4.592942 AGCACAATATGTCTCACCATGTT 58.407 39.130 0.00 0.00 0.00 2.71
222 223 5.012239 AGCACAATATGTCTCACCATGTTT 58.988 37.500 0.00 0.00 0.00 2.83
223 224 5.477984 AGCACAATATGTCTCACCATGTTTT 59.522 36.000 0.00 0.00 0.00 2.43
224 225 6.015180 AGCACAATATGTCTCACCATGTTTTT 60.015 34.615 0.00 0.00 0.00 1.94
225 226 7.176515 AGCACAATATGTCTCACCATGTTTTTA 59.823 33.333 0.00 0.00 0.00 1.52
226 227 7.485913 GCACAATATGTCTCACCATGTTTTTAG 59.514 37.037 0.00 0.00 0.00 1.85
227 228 7.970061 CACAATATGTCTCACCATGTTTTTAGG 59.030 37.037 0.00 0.00 0.00 2.69
228 229 7.888021 ACAATATGTCTCACCATGTTTTTAGGA 59.112 33.333 0.00 0.00 0.00 2.94
229 230 8.739039 CAATATGTCTCACCATGTTTTTAGGAA 58.261 33.333 0.00 0.00 0.00 3.36
230 231 9.479549 AATATGTCTCACCATGTTTTTAGGAAT 57.520 29.630 0.00 0.00 0.00 3.01
232 233 7.921786 TGTCTCACCATGTTTTTAGGAATAG 57.078 36.000 0.00 0.00 0.00 1.73
233 234 6.374333 TGTCTCACCATGTTTTTAGGAATAGC 59.626 38.462 0.00 0.00 0.00 2.97
234 235 6.599638 GTCTCACCATGTTTTTAGGAATAGCT 59.400 38.462 0.00 0.00 0.00 3.32
235 236 7.769044 GTCTCACCATGTTTTTAGGAATAGCTA 59.231 37.037 0.00 0.00 0.00 3.32
236 237 7.987458 TCTCACCATGTTTTTAGGAATAGCTAG 59.013 37.037 0.00 0.00 0.00 3.42
237 238 7.630082 TCACCATGTTTTTAGGAATAGCTAGT 58.370 34.615 0.00 0.00 0.00 2.57
238 239 8.107095 TCACCATGTTTTTAGGAATAGCTAGTT 58.893 33.333 0.00 0.00 0.00 2.24
239 240 9.391006 CACCATGTTTTTAGGAATAGCTAGTTA 57.609 33.333 0.00 0.00 0.00 2.24
252 253 9.157104 GGAATAGCTAGTTATTGAAGATAAGGC 57.843 37.037 15.66 0.00 0.00 4.35
253 254 9.936759 GAATAGCTAGTTATTGAAGATAAGGCT 57.063 33.333 15.66 0.00 0.00 4.58
257 258 9.148879 AGCTAGTTATTGAAGATAAGGCTAAGA 57.851 33.333 0.00 0.00 0.00 2.10
258 259 9.418045 GCTAGTTATTGAAGATAAGGCTAAGAG 57.582 37.037 0.00 0.00 0.00 2.85
261 262 9.995003 AGTTATTGAAGATAAGGCTAAGAGATG 57.005 33.333 0.00 0.00 0.00 2.90
262 263 9.988815 GTTATTGAAGATAAGGCTAAGAGATGA 57.011 33.333 0.00 0.00 0.00 2.92
263 264 9.988815 TTATTGAAGATAAGGCTAAGAGATGAC 57.011 33.333 0.00 0.00 0.00 3.06
264 265 6.412362 TGAAGATAAGGCTAAGAGATGACC 57.588 41.667 0.00 0.00 0.00 4.02
265 266 5.305644 TGAAGATAAGGCTAAGAGATGACCC 59.694 44.000 0.00 0.00 0.00 4.46
266 267 4.820775 AGATAAGGCTAAGAGATGACCCA 58.179 43.478 0.00 0.00 0.00 4.51
267 268 5.410602 AGATAAGGCTAAGAGATGACCCAT 58.589 41.667 0.00 0.00 0.00 4.00
268 269 5.848921 AGATAAGGCTAAGAGATGACCCATT 59.151 40.000 0.00 0.00 0.00 3.16
269 270 4.870021 AAGGCTAAGAGATGACCCATTT 57.130 40.909 0.00 0.00 0.00 2.32
270 271 4.870021 AGGCTAAGAGATGACCCATTTT 57.130 40.909 0.00 0.00 0.00 1.82
271 272 5.975988 AGGCTAAGAGATGACCCATTTTA 57.024 39.130 0.00 0.00 0.00 1.52
272 273 6.327386 AGGCTAAGAGATGACCCATTTTAA 57.673 37.500 0.00 0.00 0.00 1.52
273 274 6.731467 AGGCTAAGAGATGACCCATTTTAAA 58.269 36.000 0.00 0.00 0.00 1.52
274 275 6.603599 AGGCTAAGAGATGACCCATTTTAAAC 59.396 38.462 0.00 0.00 0.00 2.01
275 276 6.377146 GGCTAAGAGATGACCCATTTTAAACA 59.623 38.462 0.00 0.00 0.00 2.83
276 277 7.068716 GGCTAAGAGATGACCCATTTTAAACAT 59.931 37.037 0.00 0.00 0.00 2.71
277 278 8.470002 GCTAAGAGATGACCCATTTTAAACATT 58.530 33.333 0.00 0.00 0.00 2.71
309 310 9.624373 AATCATCTCTAAATTACATGCAAGACT 57.376 29.630 0.00 0.00 0.00 3.24
310 311 9.624373 ATCATCTCTAAATTACATGCAAGACTT 57.376 29.630 0.00 0.00 0.00 3.01
344 345 9.884465 GACTATCTTATCAACCATTTTACATGC 57.116 33.333 0.00 0.00 0.00 4.06
345 346 8.850156 ACTATCTTATCAACCATTTTACATGCC 58.150 33.333 0.00 0.00 0.00 4.40
346 347 6.463995 TCTTATCAACCATTTTACATGCCC 57.536 37.500 0.00 0.00 0.00 5.36
347 348 6.194235 TCTTATCAACCATTTTACATGCCCT 58.806 36.000 0.00 0.00 0.00 5.19
348 349 4.741321 ATCAACCATTTTACATGCCCTG 57.259 40.909 0.00 0.00 0.00 4.45
349 350 3.772387 TCAACCATTTTACATGCCCTGA 58.228 40.909 0.00 0.00 0.00 3.86
350 351 3.509575 TCAACCATTTTACATGCCCTGAC 59.490 43.478 0.00 0.00 0.00 3.51
351 352 2.456577 ACCATTTTACATGCCCTGACC 58.543 47.619 0.00 0.00 0.00 4.02
357 358 1.959710 TACATGCCCTGACCCAACTA 58.040 50.000 0.00 0.00 0.00 2.24
429 432 2.103094 CACGAGCCCTTCTGAATATCCA 59.897 50.000 0.00 0.00 0.00 3.41
430 433 2.771943 ACGAGCCCTTCTGAATATCCAA 59.228 45.455 0.00 0.00 0.00 3.53
537 544 0.466124 CTCCCGACCCAAAGATCTCC 59.534 60.000 0.00 0.00 0.00 3.71
1022 1029 1.202973 CCTCATCGTCACATCGCGTC 61.203 60.000 5.77 0.00 0.00 5.19
1082 1089 1.555075 GGTATGTGCTTGTCCTCCTCA 59.445 52.381 0.00 0.00 0.00 3.86
1083 1090 2.171448 GGTATGTGCTTGTCCTCCTCAT 59.829 50.000 0.00 0.00 0.00 2.90
1084 1091 2.706339 ATGTGCTTGTCCTCCTCATC 57.294 50.000 0.00 0.00 0.00 2.92
1088 1095 0.908198 GCTTGTCCTCCTCATCCAGT 59.092 55.000 0.00 0.00 0.00 4.00
1193 1202 2.071540 GTTTACACGGGCCAGTTCTAC 58.928 52.381 5.51 0.00 0.00 2.59
1215 1224 8.522003 TCTACTGAGATTGATATCTGAATGAGC 58.478 37.037 3.98 0.00 41.23 4.26
1219 1235 5.236282 AGATTGATATCTGAATGAGCCACG 58.764 41.667 3.98 0.00 39.66 4.94
1302 1318 5.404946 AGTTTTATCTGCATGATGTTGTGC 58.595 37.500 0.00 0.00 41.61 4.57
1315 1331 2.212652 TGTTGTGCTAGCAGAGTTGTG 58.787 47.619 20.03 0.00 0.00 3.33
1327 1343 3.686726 GCAGAGTTGTGGTCAATCTAAGG 59.313 47.826 0.00 0.00 35.92 2.69
1391 1415 4.154347 CTCCACAGGAGGCTCCGC 62.154 72.222 27.11 5.21 45.43 5.54
1412 1436 4.733405 CGCGATAATCTTTAGGCCAAAAAC 59.267 41.667 5.01 0.00 0.00 2.43
1430 1524 7.484959 GCCAAAAACGAGATAATTCTGTTTAGG 59.515 37.037 0.00 0.00 34.76 2.69
1431 1525 7.484959 CCAAAAACGAGATAATTCTGTTTAGGC 59.515 37.037 0.00 0.00 34.76 3.93
1432 1526 7.681939 AAAACGAGATAATTCTGTTTAGGCA 57.318 32.000 0.00 0.00 34.76 4.75
1433 1527 7.865706 AAACGAGATAATTCTGTTTAGGCAT 57.134 32.000 0.00 0.00 34.42 4.40
1434 1528 7.865706 AACGAGATAATTCTGTTTAGGCATT 57.134 32.000 0.00 0.00 30.30 3.56
1437 1531 9.391006 ACGAGATAATTCTGTTTAGGCATTTAA 57.609 29.630 0.00 0.00 30.30 1.52
1463 1557 3.568007 GTGGTTTGGTTAGTTCTGCATCA 59.432 43.478 0.00 0.00 0.00 3.07
1464 1558 4.218417 GTGGTTTGGTTAGTTCTGCATCAT 59.782 41.667 0.00 0.00 0.00 2.45
1473 1567 6.238759 GGTTAGTTCTGCATCATTGGTTATCC 60.239 42.308 0.00 0.00 0.00 2.59
1479 1573 4.795469 TGCATCATTGGTTATCCTGTGAT 58.205 39.130 0.00 5.30 38.25 3.06
1486 1580 7.999679 TCATTGGTTATCCTGTGATTTCATTC 58.000 34.615 0.00 0.00 32.18 2.67
1490 1584 5.591877 GGTTATCCTGTGATTTCATTCAGCT 59.408 40.000 0.00 0.00 32.18 4.24
1530 1625 4.069304 GTGTTTAAGAGGCCATGTGTACA 58.931 43.478 5.01 0.00 0.00 2.90
1531 1626 4.517453 GTGTTTAAGAGGCCATGTGTACAA 59.483 41.667 5.01 0.00 0.00 2.41
1532 1627 5.009210 GTGTTTAAGAGGCCATGTGTACAAA 59.991 40.000 5.01 0.00 0.00 2.83
1533 1628 5.594725 TGTTTAAGAGGCCATGTGTACAAAA 59.405 36.000 5.01 0.00 0.00 2.44
1534 1629 6.096987 TGTTTAAGAGGCCATGTGTACAAAAA 59.903 34.615 5.01 0.00 0.00 1.94
1536 1631 2.552315 AGAGGCCATGTGTACAAAAACG 59.448 45.455 5.01 0.00 0.00 3.60
1537 1632 2.292292 GAGGCCATGTGTACAAAAACGT 59.708 45.455 5.01 0.00 0.00 3.99
1538 1633 2.292292 AGGCCATGTGTACAAAAACGTC 59.708 45.455 5.01 0.00 0.00 4.34
1539 1634 2.292292 GGCCATGTGTACAAAAACGTCT 59.708 45.455 0.00 0.00 0.00 4.18
1540 1635 3.243267 GGCCATGTGTACAAAAACGTCTT 60.243 43.478 0.00 0.00 0.00 3.01
1541 1636 4.023878 GGCCATGTGTACAAAAACGTCTTA 60.024 41.667 0.00 0.00 0.00 2.10
1542 1637 5.335348 GGCCATGTGTACAAAAACGTCTTAT 60.335 40.000 0.00 0.00 0.00 1.73
1543 1638 5.567534 GCCATGTGTACAAAAACGTCTTATG 59.432 40.000 0.00 0.00 0.00 1.90
1544 1639 6.664515 CCATGTGTACAAAAACGTCTTATGT 58.335 36.000 0.00 0.00 0.00 2.29
1545 1640 7.136119 CCATGTGTACAAAAACGTCTTATGTT 58.864 34.615 0.00 0.00 0.00 2.71
1546 1641 7.646130 CCATGTGTACAAAAACGTCTTATGTTT 59.354 33.333 0.00 0.00 38.84 2.83
1547 1642 9.653067 CATGTGTACAAAAACGTCTTATGTTTA 57.347 29.630 0.00 0.00 36.39 2.01
1548 1643 9.872757 ATGTGTACAAAAACGTCTTATGTTTAG 57.127 29.630 0.00 0.00 36.39 1.85
1549 1644 9.096160 TGTGTACAAAAACGTCTTATGTTTAGA 57.904 29.630 0.00 0.00 36.39 2.10
1550 1645 9.577003 GTGTACAAAAACGTCTTATGTTTAGAG 57.423 33.333 0.00 0.00 36.39 2.43
1556 1651 9.874215 AAAAACGTCTTATGTTTAGAGTTTAGC 57.126 29.630 0.00 0.00 36.39 3.09
1558 1653 6.932947 ACGTCTTATGTTTAGAGTTTAGCCT 58.067 36.000 0.00 0.00 0.00 4.58
1560 1655 7.972832 ACGTCTTATGTTTAGAGTTTAGCCTAC 59.027 37.037 0.00 0.00 0.00 3.18
1562 1657 9.649167 GTCTTATGTTTAGAGTTTAGCCTACAA 57.351 33.333 0.00 0.00 0.00 2.41
1567 1662 7.632721 TGTTTAGAGTTTAGCCTACAAAAACG 58.367 34.615 0.00 0.00 37.99 3.60
1568 1663 7.280652 TGTTTAGAGTTTAGCCTACAAAAACGT 59.719 33.333 0.00 0.00 37.99 3.99
1569 1664 5.919272 AGAGTTTAGCCTACAAAAACGTC 57.081 39.130 0.00 0.00 37.99 4.34
1571 1666 6.053650 AGAGTTTAGCCTACAAAAACGTCTT 58.946 36.000 0.00 0.00 37.99 3.01
1573 1668 7.876582 AGAGTTTAGCCTACAAAAACGTCTTAT 59.123 33.333 0.00 0.00 37.99 1.73
1576 1671 9.911980 GTTTAGCCTACAAAAACGTCTTATATC 57.088 33.333 0.00 0.00 0.00 1.63
1577 1672 9.880157 TTTAGCCTACAAAAACGTCTTATATCT 57.120 29.630 0.00 0.00 0.00 1.98
1580 1675 9.310716 AGCCTACAAAAACGTCTTATATCTAAC 57.689 33.333 0.00 0.00 0.00 2.34
1612 1707 5.178797 ACATCTTATGTTTTGAGACGGAGG 58.821 41.667 0.00 0.00 41.63 4.30
1613 1708 3.596214 TCTTATGTTTTGAGACGGAGGC 58.404 45.455 0.00 0.00 0.00 4.70
1614 1709 3.007506 TCTTATGTTTTGAGACGGAGGCA 59.992 43.478 0.00 0.00 0.00 4.75
1631 1726 4.461081 GGAGGCAGTAGACTATACCATCAG 59.539 50.000 0.00 0.00 28.39 2.90
1675 1771 8.243426 TCCATGTACAAGATTGAAAAATACAGC 58.757 33.333 0.00 0.00 0.00 4.40
1691 1787 3.618690 ACAGCCACATCTAACTTCCTC 57.381 47.619 0.00 0.00 0.00 3.71
1692 1788 2.906389 ACAGCCACATCTAACTTCCTCA 59.094 45.455 0.00 0.00 0.00 3.86
1700 1796 7.626452 GCCACATCTAACTTCCTCAAAATGTAC 60.626 40.741 0.00 0.00 0.00 2.90
1702 1798 8.660373 CACATCTAACTTCCTCAAAATGTACTC 58.340 37.037 0.00 0.00 0.00 2.59
1703 1799 7.824779 ACATCTAACTTCCTCAAAATGTACTCC 59.175 37.037 0.00 0.00 0.00 3.85
1704 1800 6.708285 TCTAACTTCCTCAAAATGTACTCCC 58.292 40.000 0.00 0.00 0.00 4.30
1705 1801 5.584551 AACTTCCTCAAAATGTACTCCCT 57.415 39.130 0.00 0.00 0.00 4.20
1706 1802 5.167303 ACTTCCTCAAAATGTACTCCCTC 57.833 43.478 0.00 0.00 0.00 4.30
1707 1803 4.019231 ACTTCCTCAAAATGTACTCCCTCC 60.019 45.833 0.00 0.00 0.00 4.30
1710 1806 3.307480 CCTCAAAATGTACTCCCTCCGTT 60.307 47.826 0.00 0.00 0.00 4.44
1711 1807 4.324267 CTCAAAATGTACTCCCTCCGTTT 58.676 43.478 0.00 0.00 0.00 3.60
1712 1808 4.320870 TCAAAATGTACTCCCTCCGTTTC 58.679 43.478 0.00 0.00 0.00 2.78
1713 1809 4.041198 TCAAAATGTACTCCCTCCGTTTCT 59.959 41.667 0.00 0.00 0.00 2.52
1714 1810 5.246656 TCAAAATGTACTCCCTCCGTTTCTA 59.753 40.000 0.00 0.00 0.00 2.10
1715 1811 5.750352 AAATGTACTCCCTCCGTTTCTAA 57.250 39.130 0.00 0.00 0.00 2.10
1716 1812 5.750352 AATGTACTCCCTCCGTTTCTAAA 57.250 39.130 0.00 0.00 0.00 1.85
1717 1813 5.952347 ATGTACTCCCTCCGTTTCTAAAT 57.048 39.130 0.00 0.00 0.00 1.40
1718 1814 7.427989 AATGTACTCCCTCCGTTTCTAAATA 57.572 36.000 0.00 0.00 0.00 1.40
1719 1815 6.212888 TGTACTCCCTCCGTTTCTAAATAC 57.787 41.667 0.00 0.00 0.00 1.89
1720 1816 5.716228 TGTACTCCCTCCGTTTCTAAATACA 59.284 40.000 0.00 0.00 0.00 2.29
1721 1817 5.750352 ACTCCCTCCGTTTCTAAATACAA 57.250 39.130 0.00 0.00 0.00 2.41
1722 1818 5.731591 ACTCCCTCCGTTTCTAAATACAAG 58.268 41.667 0.00 0.00 0.00 3.16
1723 1819 4.510571 TCCCTCCGTTTCTAAATACAAGC 58.489 43.478 0.00 0.00 0.00 4.01
1724 1820 3.626217 CCCTCCGTTTCTAAATACAAGCC 59.374 47.826 0.00 0.00 0.00 4.35
1727 1823 5.414765 CCTCCGTTTCTAAATACAAGCCTTT 59.585 40.000 0.00 0.00 0.00 3.11
1728 1824 6.072119 CCTCCGTTTCTAAATACAAGCCTTTT 60.072 38.462 0.00 0.00 0.00 2.27
1729 1825 7.279750 TCCGTTTCTAAATACAAGCCTTTTT 57.720 32.000 0.00 0.00 0.00 1.94
1730 1826 8.393671 TCCGTTTCTAAATACAAGCCTTTTTA 57.606 30.769 0.00 0.00 0.00 1.52
1731 1827 8.508875 TCCGTTTCTAAATACAAGCCTTTTTAG 58.491 33.333 2.15 2.15 34.47 1.85
1732 1828 8.508875 CCGTTTCTAAATACAAGCCTTTTTAGA 58.491 33.333 5.96 5.96 38.33 2.10
1733 1829 9.543018 CGTTTCTAAATACAAGCCTTTTTAGAG 57.457 33.333 8.88 0.00 40.09 2.43
1745 1841 9.578439 CAAGCCTTTTTAGAGATTTCAATAAGG 57.422 33.333 0.00 0.00 0.00 2.69
1746 1842 9.533831 AAGCCTTTTTAGAGATTTCAATAAGGA 57.466 29.630 14.99 0.00 0.00 3.36
1747 1843 8.961634 AGCCTTTTTAGAGATTTCAATAAGGAC 58.038 33.333 14.99 9.85 0.00 3.85
1748 1844 8.961634 GCCTTTTTAGAGATTTCAATAAGGACT 58.038 33.333 14.99 0.00 0.00 3.85
1756 1852 8.361139 AGAGATTTCAATAAGGACTACATACGG 58.639 37.037 0.00 0.00 0.00 4.02
1757 1853 8.246430 AGATTTCAATAAGGACTACATACGGA 57.754 34.615 0.00 0.00 0.00 4.69
1758 1854 8.871125 AGATTTCAATAAGGACTACATACGGAT 58.129 33.333 0.00 0.00 0.00 4.18
1759 1855 8.833231 ATTTCAATAAGGACTACATACGGATG 57.167 34.615 5.94 5.94 39.16 3.51
1761 1857 8.467963 TTCAATAAGGACTACATACGGATGTA 57.532 34.615 19.32 19.32 44.77 2.29
1762 1858 8.645814 TCAATAAGGACTACATACGGATGTAT 57.354 34.615 20.64 11.04 45.42 2.29
1763 1859 9.743581 TCAATAAGGACTACATACGGATGTATA 57.256 33.333 20.64 10.32 45.42 1.47
1768 1864 8.961294 AGGACTACATACGGATGTATATAGAC 57.039 38.462 20.64 10.95 45.42 2.59
1769 1865 7.710044 AGGACTACATACGGATGTATATAGACG 59.290 40.741 20.64 9.79 45.42 4.18
1770 1866 7.493971 GGACTACATACGGATGTATATAGACGT 59.506 40.741 20.64 12.85 45.42 4.34
1771 1867 9.521503 GACTACATACGGATGTATATAGACGTA 57.478 37.037 20.64 9.65 45.42 3.57
1789 1885 5.864474 AGACGTATTTTAGACTGTGCTGAAG 59.136 40.000 0.00 0.00 0.00 3.02
2028 2124 3.199290 CCGGGGGCAAAATGATACA 57.801 52.632 0.00 0.00 0.00 2.29
2031 2127 1.136110 CGGGGGCAAAATGATACAACC 59.864 52.381 0.00 0.00 0.00 3.77
2228 2327 9.802039 TGTTTTTGTAACTCAGGGTATAAGAAT 57.198 29.630 0.00 0.00 0.00 2.40
2283 2382 7.341512 TGATTGTTTTGCTCCCATGATACATTA 59.658 33.333 0.00 0.00 0.00 1.90
2284 2383 7.658525 TTGTTTTGCTCCCATGATACATTAT 57.341 32.000 0.00 0.00 0.00 1.28
2285 2384 8.759481 TTGTTTTGCTCCCATGATACATTATA 57.241 30.769 0.00 0.00 0.00 0.98
2329 2430 6.485313 TGAAACTAGTGTCAGGTACCAAATTG 59.515 38.462 15.94 3.33 0.00 2.32
2331 2432 3.508845 AGTGTCAGGTACCAAATTGCT 57.491 42.857 15.94 1.90 0.00 3.91
2333 2434 2.884639 GTGTCAGGTACCAAATTGCTGT 59.115 45.455 15.94 0.00 0.00 4.40
2334 2435 2.884012 TGTCAGGTACCAAATTGCTGTG 59.116 45.455 15.94 0.00 0.00 3.66
2335 2436 2.884639 GTCAGGTACCAAATTGCTGTGT 59.115 45.455 15.94 0.00 0.00 3.72
2337 2438 3.149196 CAGGTACCAAATTGCTGTGTCT 58.851 45.455 15.94 0.00 0.00 3.41
2338 2439 4.041075 TCAGGTACCAAATTGCTGTGTCTA 59.959 41.667 15.94 0.00 0.00 2.59
2339 2440 4.759693 CAGGTACCAAATTGCTGTGTCTAA 59.240 41.667 15.94 0.00 0.00 2.10
2340 2441 5.240623 CAGGTACCAAATTGCTGTGTCTAAA 59.759 40.000 15.94 0.00 0.00 1.85
2412 2534 5.500290 CGCGACCTATGTTTGTATCTGTTTC 60.500 44.000 0.00 0.00 0.00 2.78
2413 2535 5.350365 GCGACCTATGTTTGTATCTGTTTCA 59.650 40.000 0.00 0.00 0.00 2.69
2415 2537 6.590292 CGACCTATGTTTGTATCTGTTTCACT 59.410 38.462 0.00 0.00 0.00 3.41
2416 2538 7.411912 CGACCTATGTTTGTATCTGTTTCACTG 60.412 40.741 0.00 0.00 0.00 3.66
2418 2540 7.719633 ACCTATGTTTGTATCTGTTTCACTGTT 59.280 33.333 0.00 0.00 0.00 3.16
2421 2543 6.559810 TGTTTGTATCTGTTTCACTGTTTGG 58.440 36.000 0.00 0.00 0.00 3.28
2422 2544 4.829064 TGTATCTGTTTCACTGTTTGGC 57.171 40.909 0.00 0.00 0.00 4.52
2423 2545 4.460263 TGTATCTGTTTCACTGTTTGGCT 58.540 39.130 0.00 0.00 0.00 4.75
2424 2546 5.616270 TGTATCTGTTTCACTGTTTGGCTA 58.384 37.500 0.00 0.00 0.00 3.93
2425 2547 6.237901 TGTATCTGTTTCACTGTTTGGCTAT 58.762 36.000 0.00 0.00 0.00 2.97
2426 2548 5.633830 ATCTGTTTCACTGTTTGGCTATG 57.366 39.130 0.00 0.00 0.00 2.23
2427 2549 4.460263 TCTGTTTCACTGTTTGGCTATGT 58.540 39.130 0.00 0.00 0.00 2.29
2429 2551 4.930963 TGTTTCACTGTTTGGCTATGTTG 58.069 39.130 0.00 0.00 0.00 3.33
2430 2552 3.641437 TTCACTGTTTGGCTATGTTGC 57.359 42.857 0.00 0.00 0.00 4.17
2431 2553 2.862541 TCACTGTTTGGCTATGTTGCT 58.137 42.857 0.00 0.00 0.00 3.91
2462 2584 2.305635 TGGTAAATTCCTGAGCAGCTGA 59.694 45.455 20.43 0.00 0.00 4.26
2516 2638 3.624410 TGCAATCTGTATGTGTCATCTGC 59.376 43.478 0.00 0.00 0.00 4.26
2524 2646 1.971481 TGTGTCATCTGCTTTGCTGT 58.029 45.000 0.00 0.00 0.00 4.40
2525 2647 1.875514 TGTGTCATCTGCTTTGCTGTC 59.124 47.619 0.00 0.00 0.00 3.51
2534 2656 1.242076 GCTTTGCTGTCTGGTGATGT 58.758 50.000 0.00 0.00 0.00 3.06
2558 2680 2.028190 CTATCCAGGGCTCGCACG 59.972 66.667 0.00 0.00 0.00 5.34
2572 2694 2.430075 CACGATGGTGCGACGTCA 60.430 61.111 17.16 0.00 37.35 4.35
2573 2695 2.430244 ACGATGGTGCGACGTCAC 60.430 61.111 17.16 6.48 35.33 3.67
2588 2710 1.974875 TCACGCTCCGCTCCTGTTA 60.975 57.895 0.00 0.00 0.00 2.41
2589 2711 1.805945 CACGCTCCGCTCCTGTTAC 60.806 63.158 0.00 0.00 0.00 2.50
2591 2713 1.805945 CGCTCCGCTCCTGTTACAC 60.806 63.158 0.00 0.00 0.00 2.90
2592 2714 1.292223 GCTCCGCTCCTGTTACACA 59.708 57.895 0.00 0.00 0.00 3.72
2593 2715 0.320421 GCTCCGCTCCTGTTACACAA 60.320 55.000 0.00 0.00 0.00 3.33
2594 2716 1.676014 GCTCCGCTCCTGTTACACAAT 60.676 52.381 0.00 0.00 0.00 2.71
2595 2717 2.002586 CTCCGCTCCTGTTACACAATG 58.997 52.381 0.00 0.00 0.00 2.82
2596 2718 1.621317 TCCGCTCCTGTTACACAATGA 59.379 47.619 0.00 0.00 0.00 2.57
2597 2719 2.236146 TCCGCTCCTGTTACACAATGAT 59.764 45.455 0.00 0.00 0.00 2.45
2598 2720 3.009723 CCGCTCCTGTTACACAATGATT 58.990 45.455 0.00 0.00 0.00 2.57
2599 2721 3.440173 CCGCTCCTGTTACACAATGATTT 59.560 43.478 0.00 0.00 0.00 2.17
2600 2722 4.082787 CCGCTCCTGTTACACAATGATTTT 60.083 41.667 0.00 0.00 0.00 1.82
2601 2723 5.088739 CGCTCCTGTTACACAATGATTTTC 58.911 41.667 0.00 0.00 0.00 2.29
2602 2724 5.402398 GCTCCTGTTACACAATGATTTTCC 58.598 41.667 0.00 0.00 0.00 3.13
2603 2725 5.183904 GCTCCTGTTACACAATGATTTTCCT 59.816 40.000 0.00 0.00 0.00 3.36
2604 2726 6.294731 GCTCCTGTTACACAATGATTTTCCTT 60.295 38.462 0.00 0.00 0.00 3.36
2605 2727 7.595819 TCCTGTTACACAATGATTTTCCTTT 57.404 32.000 0.00 0.00 0.00 3.11
2606 2728 8.017418 TCCTGTTACACAATGATTTTCCTTTT 57.983 30.769 0.00 0.00 0.00 2.27
2607 2729 8.482128 TCCTGTTACACAATGATTTTCCTTTTT 58.518 29.630 0.00 0.00 0.00 1.94
2608 2730 8.764287 CCTGTTACACAATGATTTTCCTTTTTC 58.236 33.333 0.00 0.00 0.00 2.29
2609 2731 9.311916 CTGTTACACAATGATTTTCCTTTTTCA 57.688 29.630 0.00 0.00 0.00 2.69
2610 2732 9.829507 TGTTACACAATGATTTTCCTTTTTCAT 57.170 25.926 0.00 0.00 0.00 2.57
2612 2734 7.967890 ACACAATGATTTTCCTTTTTCATCC 57.032 32.000 0.00 0.00 0.00 3.51
2613 2735 7.738847 ACACAATGATTTTCCTTTTTCATCCT 58.261 30.769 0.00 0.00 0.00 3.24
2614 2736 7.658575 ACACAATGATTTTCCTTTTTCATCCTG 59.341 33.333 0.00 0.00 0.00 3.86
2645 2767 2.143925 GAGACAAGGCCAGTGTGTTAC 58.856 52.381 16.19 2.86 0.00 2.50
2648 2770 3.326588 AGACAAGGCCAGTGTGTTACATA 59.673 43.478 16.19 0.00 0.00 2.29
2650 2772 4.662278 ACAAGGCCAGTGTGTTACATAAT 58.338 39.130 5.01 0.00 0.00 1.28
2656 2779 5.391950 GGCCAGTGTGTTACATAATCTGTTG 60.392 44.000 0.00 0.00 39.39 3.33
2669 2795 6.424509 ACATAATCTGTTGCACAAACCAAATG 59.575 34.615 0.00 0.00 38.06 2.32
2674 2800 3.131933 TGTTGCACAAACCAAATGCTACT 59.868 39.130 10.46 0.00 42.90 2.57
2682 2808 8.137437 GCACAAACCAAATGCTACTAATATCAT 58.863 33.333 0.00 0.00 36.40 2.45
2735 2872 7.807977 ATGTACTGTGATTATTTAAGGGCTG 57.192 36.000 0.00 0.00 0.00 4.85
2773 2964 4.713321 AGTGATTTCTTTTGGGCATAGCAT 59.287 37.500 0.00 0.00 0.00 3.79
2776 2967 4.724074 TTTCTTTTGGGCATAGCATCAG 57.276 40.909 0.00 0.00 0.00 2.90
2777 2968 3.370840 TCTTTTGGGCATAGCATCAGT 57.629 42.857 0.00 0.00 0.00 3.41
2779 2970 4.854173 TCTTTTGGGCATAGCATCAGTTA 58.146 39.130 0.00 0.00 0.00 2.24
2781 2972 4.502105 TTTGGGCATAGCATCAGTTAGA 57.498 40.909 0.00 0.00 0.00 2.10
2782 2973 3.758755 TGGGCATAGCATCAGTTAGAG 57.241 47.619 0.00 0.00 0.00 2.43
2805 3296 1.142688 AGGGGAGGATGCTGTTTGGT 61.143 55.000 0.00 0.00 0.00 3.67
2806 3297 0.251787 GGGGAGGATGCTGTTTGGTT 60.252 55.000 0.00 0.00 0.00 3.67
2807 3298 1.005450 GGGGAGGATGCTGTTTGGTTA 59.995 52.381 0.00 0.00 0.00 2.85
2809 3300 3.365472 GGGAGGATGCTGTTTGGTTATT 58.635 45.455 0.00 0.00 0.00 1.40
2810 3301 4.532834 GGGAGGATGCTGTTTGGTTATTA 58.467 43.478 0.00 0.00 0.00 0.98
2811 3302 4.580580 GGGAGGATGCTGTTTGGTTATTAG 59.419 45.833 0.00 0.00 0.00 1.73
2812 3303 4.580580 GGAGGATGCTGTTTGGTTATTAGG 59.419 45.833 0.00 0.00 0.00 2.69
2813 3304 4.536765 AGGATGCTGTTTGGTTATTAGGG 58.463 43.478 0.00 0.00 0.00 3.53
2814 3305 4.017499 AGGATGCTGTTTGGTTATTAGGGT 60.017 41.667 0.00 0.00 0.00 4.34
2877 3372 4.446371 AGCTAGAATTGGAGACGAATTGG 58.554 43.478 0.00 0.00 0.00 3.16
2885 3380 4.235079 TGGAGACGAATTGGAATTCCAT 57.765 40.909 27.53 14.26 46.97 3.41
2886 3381 4.599041 TGGAGACGAATTGGAATTCCATT 58.401 39.130 27.53 20.76 46.97 3.16
2932 3670 2.627515 AGCTGAACTGAAGCACTGAA 57.372 45.000 0.00 0.00 43.37 3.02
2937 3686 1.942657 GAACTGAAGCACTGAAGCACA 59.057 47.619 0.00 0.00 36.85 4.57
2956 3705 2.158623 ACACAAGACCATTTCCAGCTGA 60.159 45.455 17.39 0.00 0.00 4.26
2962 3711 2.169352 GACCATTTCCAGCTGAGCTAGA 59.831 50.000 17.39 1.31 36.40 2.43
2963 3712 2.573462 ACCATTTCCAGCTGAGCTAGAA 59.427 45.455 17.39 11.22 36.40 2.10
2964 3713 3.201708 ACCATTTCCAGCTGAGCTAGAAT 59.798 43.478 15.64 9.25 36.35 2.40
2965 3714 4.205587 CCATTTCCAGCTGAGCTAGAATT 58.794 43.478 15.64 9.78 36.35 2.17
2966 3715 4.036498 CCATTTCCAGCTGAGCTAGAATTG 59.964 45.833 22.01 22.01 36.35 2.32
2967 3716 2.996249 TCCAGCTGAGCTAGAATTGG 57.004 50.000 17.39 3.92 36.40 3.16
2968 3717 2.470990 TCCAGCTGAGCTAGAATTGGA 58.529 47.619 17.39 6.70 36.40 3.53
2969 3718 2.840038 TCCAGCTGAGCTAGAATTGGAA 59.160 45.455 17.39 0.00 36.40 3.53
2970 3719 3.118482 TCCAGCTGAGCTAGAATTGGAAG 60.118 47.826 17.39 0.00 36.40 3.46
2971 3720 3.118482 CCAGCTGAGCTAGAATTGGAAGA 60.118 47.826 17.39 0.00 36.40 2.87
3019 3768 2.042686 AGCTGAACTGAAGCACACAA 57.957 45.000 0.00 0.00 43.37 3.33
3021 3770 1.598924 GCTGAACTGAAGCACACAAGC 60.599 52.381 0.00 0.00 40.52 4.01
3023 3772 0.312102 GAACTGAAGCACACAAGCCC 59.688 55.000 0.00 0.00 34.23 5.19
3024 3773 0.395586 AACTGAAGCACACAAGCCCA 60.396 50.000 0.00 0.00 34.23 5.36
3025 3774 0.178981 ACTGAAGCACACAAGCCCAT 60.179 50.000 0.00 0.00 34.23 4.00
3027 3776 1.342174 CTGAAGCACACAAGCCCATTT 59.658 47.619 0.00 0.00 34.23 2.32
3028 3777 1.340889 TGAAGCACACAAGCCCATTTC 59.659 47.619 0.00 0.00 34.23 2.17
3029 3778 0.681175 AAGCACACAAGCCCATTTCC 59.319 50.000 0.00 0.00 34.23 3.13
3030 3779 0.469705 AGCACACAAGCCCATTTCCA 60.470 50.000 0.00 0.00 34.23 3.53
3031 3780 0.037975 GCACACAAGCCCATTTCCAG 60.038 55.000 0.00 0.00 0.00 3.86
3043 3792 3.944015 CCCATTTCCAGTTGAGCTAGAAG 59.056 47.826 0.00 0.00 0.00 2.85
3128 3887 1.001393 TCCCCAAAATGGCGTCTCC 60.001 57.895 0.00 0.00 35.79 3.71
3129 3888 1.000896 CCCCAAAATGGCGTCTCCT 60.001 57.895 0.00 0.00 35.79 3.69
3252 4020 2.466982 CGAAGCTGTGATGCGCCAT 61.467 57.895 4.18 0.00 38.13 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 3.003378 ACGTCCTTTCTTTAAGCTTGTGC 59.997 43.478 9.86 0.00 40.05 4.57
9 10 4.272504 TGACGTCCTTTCTTTAAGCTTGTG 59.727 41.667 14.12 0.00 32.19 3.33
10 11 4.448210 TGACGTCCTTTCTTTAAGCTTGT 58.552 39.130 14.12 0.00 32.19 3.16
11 12 5.613358 ATGACGTCCTTTCTTTAAGCTTG 57.387 39.130 14.12 0.00 32.19 4.01
12 13 7.606456 TCATAATGACGTCCTTTCTTTAAGCTT 59.394 33.333 14.12 3.48 32.19 3.74
13 14 7.103641 TCATAATGACGTCCTTTCTTTAAGCT 58.896 34.615 14.12 0.00 32.19 3.74
14 15 7.303634 TCATAATGACGTCCTTTCTTTAAGC 57.696 36.000 14.12 0.00 32.19 3.09
18 19 9.449719 AACTAATCATAATGACGTCCTTTCTTT 57.550 29.630 14.12 4.89 0.00 2.52
45 46 9.758651 GGTACTAAATTTTGTCACCAAAGATTT 57.241 29.630 8.57 0.00 41.37 2.17
46 47 8.079809 CGGTACTAAATTTTGTCACCAAAGATT 58.920 33.333 20.04 0.00 41.37 2.40
47 48 7.229907 ACGGTACTAAATTTTGTCACCAAAGAT 59.770 33.333 20.04 7.22 41.37 2.40
48 49 6.543100 ACGGTACTAAATTTTGTCACCAAAGA 59.457 34.615 20.04 0.46 41.37 2.52
49 50 6.635239 CACGGTACTAAATTTTGTCACCAAAG 59.365 38.462 20.04 12.45 41.37 2.77
50 51 6.318144 TCACGGTACTAAATTTTGTCACCAAA 59.682 34.615 20.04 9.88 38.77 3.28
51 52 5.821470 TCACGGTACTAAATTTTGTCACCAA 59.179 36.000 20.04 10.09 0.00 3.67
52 53 5.366460 TCACGGTACTAAATTTTGTCACCA 58.634 37.500 20.04 7.97 0.00 4.17
53 54 5.106830 CCTCACGGTACTAAATTTTGTCACC 60.107 44.000 8.57 12.66 0.00 4.02
54 55 5.106830 CCCTCACGGTACTAAATTTTGTCAC 60.107 44.000 8.57 6.28 0.00 3.67
55 56 4.998672 CCCTCACGGTACTAAATTTTGTCA 59.001 41.667 8.57 0.00 0.00 3.58
56 57 4.142752 GCCCTCACGGTACTAAATTTTGTC 60.143 45.833 8.57 1.99 0.00 3.18
57 58 3.754850 GCCCTCACGGTACTAAATTTTGT 59.245 43.478 10.11 10.11 0.00 2.83
58 59 3.754323 TGCCCTCACGGTACTAAATTTTG 59.246 43.478 0.00 0.00 0.00 2.44
59 60 4.023726 TGCCCTCACGGTACTAAATTTT 57.976 40.909 0.00 0.00 0.00 1.82
60 61 3.706600 TGCCCTCACGGTACTAAATTT 57.293 42.857 0.00 0.00 0.00 1.82
61 62 3.054655 ACATGCCCTCACGGTACTAAATT 60.055 43.478 0.00 0.00 0.00 1.82
62 63 2.504175 ACATGCCCTCACGGTACTAAAT 59.496 45.455 0.00 0.00 0.00 1.40
63 64 1.903860 ACATGCCCTCACGGTACTAAA 59.096 47.619 0.00 0.00 0.00 1.85
64 65 1.563924 ACATGCCCTCACGGTACTAA 58.436 50.000 0.00 0.00 0.00 2.24
65 66 2.026641 GTACATGCCCTCACGGTACTA 58.973 52.381 0.00 0.00 35.31 1.82
66 67 0.822164 GTACATGCCCTCACGGTACT 59.178 55.000 0.00 0.00 35.31 2.73
67 68 0.533491 TGTACATGCCCTCACGGTAC 59.467 55.000 0.00 0.00 37.09 3.34
68 69 1.268066 TTGTACATGCCCTCACGGTA 58.732 50.000 0.00 0.00 0.00 4.02
69 70 0.618458 ATTGTACATGCCCTCACGGT 59.382 50.000 0.00 0.00 0.00 4.83
70 71 1.016627 CATTGTACATGCCCTCACGG 58.983 55.000 0.00 0.00 0.00 4.94
71 72 1.016627 CCATTGTACATGCCCTCACG 58.983 55.000 0.00 0.00 0.00 4.35
72 73 1.745087 CACCATTGTACATGCCCTCAC 59.255 52.381 0.00 0.00 0.00 3.51
73 74 1.954733 GCACCATTGTACATGCCCTCA 60.955 52.381 7.77 0.00 31.71 3.86
74 75 0.740737 GCACCATTGTACATGCCCTC 59.259 55.000 7.77 0.00 31.71 4.30
75 76 0.332632 AGCACCATTGTACATGCCCT 59.667 50.000 14.08 0.00 38.92 5.19
76 77 2.051334 TAGCACCATTGTACATGCCC 57.949 50.000 14.08 0.00 38.92 5.36
77 78 3.480470 AGATAGCACCATTGTACATGCC 58.520 45.455 14.08 1.71 38.92 4.40
78 79 5.180117 CCTAAGATAGCACCATTGTACATGC 59.820 44.000 10.53 10.53 38.39 4.06
79 80 6.524734 TCCTAAGATAGCACCATTGTACATG 58.475 40.000 0.00 0.00 0.00 3.21
80 81 6.327626 ACTCCTAAGATAGCACCATTGTACAT 59.672 38.462 0.00 0.00 0.00 2.29
81 82 5.661312 ACTCCTAAGATAGCACCATTGTACA 59.339 40.000 0.00 0.00 0.00 2.90
82 83 5.986135 CACTCCTAAGATAGCACCATTGTAC 59.014 44.000 0.00 0.00 0.00 2.90
83 84 5.453339 GCACTCCTAAGATAGCACCATTGTA 60.453 44.000 0.00 0.00 0.00 2.41
84 85 4.684485 GCACTCCTAAGATAGCACCATTGT 60.684 45.833 0.00 0.00 0.00 2.71
85 86 3.812053 GCACTCCTAAGATAGCACCATTG 59.188 47.826 0.00 0.00 0.00 2.82
86 87 3.181450 GGCACTCCTAAGATAGCACCATT 60.181 47.826 0.00 0.00 0.00 3.16
87 88 2.370189 GGCACTCCTAAGATAGCACCAT 59.630 50.000 0.00 0.00 0.00 3.55
88 89 1.762957 GGCACTCCTAAGATAGCACCA 59.237 52.381 0.00 0.00 0.00 4.17
89 90 1.762957 TGGCACTCCTAAGATAGCACC 59.237 52.381 0.00 0.00 0.00 5.01
90 91 3.181461 ACATGGCACTCCTAAGATAGCAC 60.181 47.826 0.00 0.00 0.00 4.40
91 92 3.041211 ACATGGCACTCCTAAGATAGCA 58.959 45.455 0.00 0.00 0.00 3.49
92 93 3.760580 ACATGGCACTCCTAAGATAGC 57.239 47.619 0.00 0.00 0.00 2.97
93 94 5.080337 TCCTACATGGCACTCCTAAGATAG 58.920 45.833 0.00 0.00 35.26 2.08
94 95 5.074746 TCCTACATGGCACTCCTAAGATA 57.925 43.478 0.00 0.00 35.26 1.98
95 96 3.928754 TCCTACATGGCACTCCTAAGAT 58.071 45.455 0.00 0.00 35.26 2.40
96 97 3.398318 TCCTACATGGCACTCCTAAGA 57.602 47.619 0.00 0.00 35.26 2.10
97 98 5.808366 TTATCCTACATGGCACTCCTAAG 57.192 43.478 0.00 0.00 35.26 2.18
98 99 6.328934 TCATTTATCCTACATGGCACTCCTAA 59.671 38.462 0.00 0.00 35.26 2.69
99 100 5.843969 TCATTTATCCTACATGGCACTCCTA 59.156 40.000 0.00 0.00 35.26 2.94
100 101 4.660303 TCATTTATCCTACATGGCACTCCT 59.340 41.667 0.00 0.00 35.26 3.69
101 102 4.973168 TCATTTATCCTACATGGCACTCC 58.027 43.478 0.00 0.00 35.26 3.85
102 103 6.233434 TCATCATTTATCCTACATGGCACTC 58.767 40.000 0.00 0.00 35.26 3.51
103 104 6.191657 TCATCATTTATCCTACATGGCACT 57.808 37.500 0.00 0.00 35.26 4.40
104 105 5.413833 CCTCATCATTTATCCTACATGGCAC 59.586 44.000 0.00 0.00 35.26 5.01
105 106 5.073554 ACCTCATCATTTATCCTACATGGCA 59.926 40.000 0.00 0.00 35.26 4.92
106 107 5.413833 CACCTCATCATTTATCCTACATGGC 59.586 44.000 0.00 0.00 35.26 4.40
107 108 5.942236 CCACCTCATCATTTATCCTACATGG 59.058 44.000 0.00 0.00 37.10 3.66
108 109 6.772605 TCCACCTCATCATTTATCCTACATG 58.227 40.000 0.00 0.00 0.00 3.21
109 110 6.013032 CCTCCACCTCATCATTTATCCTACAT 60.013 42.308 0.00 0.00 0.00 2.29
110 111 5.307976 CCTCCACCTCATCATTTATCCTACA 59.692 44.000 0.00 0.00 0.00 2.74
111 112 5.280215 CCCTCCACCTCATCATTTATCCTAC 60.280 48.000 0.00 0.00 0.00 3.18
112 113 4.846367 CCCTCCACCTCATCATTTATCCTA 59.154 45.833 0.00 0.00 0.00 2.94
113 114 3.654806 CCCTCCACCTCATCATTTATCCT 59.345 47.826 0.00 0.00 0.00 3.24
114 115 3.245052 CCCCTCCACCTCATCATTTATCC 60.245 52.174 0.00 0.00 0.00 2.59
115 116 3.652869 TCCCCTCCACCTCATCATTTATC 59.347 47.826 0.00 0.00 0.00 1.75
116 117 3.654806 CTCCCCTCCACCTCATCATTTAT 59.345 47.826 0.00 0.00 0.00 1.40
117 118 3.048600 CTCCCCTCCACCTCATCATTTA 58.951 50.000 0.00 0.00 0.00 1.40
118 119 1.849039 CTCCCCTCCACCTCATCATTT 59.151 52.381 0.00 0.00 0.00 2.32
119 120 1.010046 TCTCCCCTCCACCTCATCATT 59.990 52.381 0.00 0.00 0.00 2.57
120 121 0.644380 TCTCCCCTCCACCTCATCAT 59.356 55.000 0.00 0.00 0.00 2.45
121 122 0.031716 CTCTCCCCTCCACCTCATCA 60.032 60.000 0.00 0.00 0.00 3.07
122 123 0.263172 TCTCTCCCCTCCACCTCATC 59.737 60.000 0.00 0.00 0.00 2.92
123 124 0.719015 TTCTCTCCCCTCCACCTCAT 59.281 55.000 0.00 0.00 0.00 2.90
124 125 0.252284 GTTCTCTCCCCTCCACCTCA 60.252 60.000 0.00 0.00 0.00 3.86
125 126 0.041982 AGTTCTCTCCCCTCCACCTC 59.958 60.000 0.00 0.00 0.00 3.85
126 127 0.041982 GAGTTCTCTCCCCTCCACCT 59.958 60.000 0.00 0.00 34.87 4.00
127 128 0.252284 TGAGTTCTCTCCCCTCCACC 60.252 60.000 1.53 0.00 39.75 4.61
128 129 1.872773 ATGAGTTCTCTCCCCTCCAC 58.127 55.000 1.53 0.00 39.75 4.02
129 130 3.272285 TCTTATGAGTTCTCTCCCCTCCA 59.728 47.826 1.53 0.00 39.75 3.86
130 131 3.917300 TCTTATGAGTTCTCTCCCCTCC 58.083 50.000 1.53 0.00 39.75 4.30
131 132 5.941555 TTTCTTATGAGTTCTCTCCCCTC 57.058 43.478 1.53 0.00 39.75 4.30
132 133 6.026186 TCTTTTCTTATGAGTTCTCTCCCCT 58.974 40.000 1.53 0.00 39.75 4.79
133 134 6.070481 AGTCTTTTCTTATGAGTTCTCTCCCC 60.070 42.308 1.53 0.00 39.75 4.81
134 135 6.941857 AGTCTTTTCTTATGAGTTCTCTCCC 58.058 40.000 1.53 0.00 39.75 4.30
135 136 7.875554 ACAAGTCTTTTCTTATGAGTTCTCTCC 59.124 37.037 1.53 0.00 39.75 3.71
136 137 8.825667 ACAAGTCTTTTCTTATGAGTTCTCTC 57.174 34.615 1.53 0.00 40.79 3.20
137 138 8.646900 AGACAAGTCTTTTCTTATGAGTTCTCT 58.353 33.333 0.00 0.00 36.31 3.10
138 139 8.825667 AGACAAGTCTTTTCTTATGAGTTCTC 57.174 34.615 0.00 0.00 36.31 2.87
186 187 8.306038 AGACATATTGTGCTAAGAGATCATCTC 58.694 37.037 6.55 6.55 43.70 2.75
187 188 8.192743 AGACATATTGTGCTAAGAGATCATCT 57.807 34.615 0.00 0.00 41.27 2.90
188 189 8.087136 TGAGACATATTGTGCTAAGAGATCATC 58.913 37.037 0.00 0.00 0.00 2.92
189 190 7.871973 GTGAGACATATTGTGCTAAGAGATCAT 59.128 37.037 0.00 0.00 0.00 2.45
190 191 7.205992 GTGAGACATATTGTGCTAAGAGATCA 58.794 38.462 0.00 0.00 0.00 2.92
191 192 6.644592 GGTGAGACATATTGTGCTAAGAGATC 59.355 42.308 0.00 0.00 0.00 2.75
192 193 6.098838 TGGTGAGACATATTGTGCTAAGAGAT 59.901 38.462 0.00 0.00 0.00 2.75
193 194 5.422012 TGGTGAGACATATTGTGCTAAGAGA 59.578 40.000 0.00 0.00 0.00 3.10
194 195 5.664457 TGGTGAGACATATTGTGCTAAGAG 58.336 41.667 0.00 0.00 0.00 2.85
195 196 5.675684 TGGTGAGACATATTGTGCTAAGA 57.324 39.130 0.00 0.00 0.00 2.10
196 197 5.819379 ACATGGTGAGACATATTGTGCTAAG 59.181 40.000 0.00 0.00 0.00 2.18
197 198 5.744171 ACATGGTGAGACATATTGTGCTAA 58.256 37.500 0.00 0.00 0.00 3.09
198 199 5.357742 ACATGGTGAGACATATTGTGCTA 57.642 39.130 0.00 0.00 0.00 3.49
199 200 4.226427 ACATGGTGAGACATATTGTGCT 57.774 40.909 0.00 0.00 0.00 4.40
200 201 4.970662 AACATGGTGAGACATATTGTGC 57.029 40.909 0.00 0.00 0.00 4.57
201 202 7.970061 CCTAAAAACATGGTGAGACATATTGTG 59.030 37.037 0.00 0.00 0.00 3.33
202 203 7.888021 TCCTAAAAACATGGTGAGACATATTGT 59.112 33.333 0.00 0.00 0.00 2.71
203 204 8.279970 TCCTAAAAACATGGTGAGACATATTG 57.720 34.615 0.00 0.00 0.00 1.90
204 205 8.877864 TTCCTAAAAACATGGTGAGACATATT 57.122 30.769 0.00 0.00 0.00 1.28
206 207 9.613428 CTATTCCTAAAAACATGGTGAGACATA 57.387 33.333 0.00 0.00 0.00 2.29
207 208 7.067494 GCTATTCCTAAAAACATGGTGAGACAT 59.933 37.037 0.00 0.00 0.00 3.06
208 209 6.374333 GCTATTCCTAAAAACATGGTGAGACA 59.626 38.462 0.00 0.00 0.00 3.41
209 210 6.599638 AGCTATTCCTAAAAACATGGTGAGAC 59.400 38.462 0.00 0.00 0.00 3.36
210 211 6.721318 AGCTATTCCTAAAAACATGGTGAGA 58.279 36.000 0.00 0.00 0.00 3.27
211 212 7.770897 ACTAGCTATTCCTAAAAACATGGTGAG 59.229 37.037 0.00 0.00 0.00 3.51
212 213 7.630082 ACTAGCTATTCCTAAAAACATGGTGA 58.370 34.615 0.00 0.00 0.00 4.02
213 214 7.865706 ACTAGCTATTCCTAAAAACATGGTG 57.134 36.000 0.00 0.00 0.00 4.17
226 227 9.157104 GCCTTATCTTCAATAACTAGCTATTCC 57.843 37.037 0.00 0.00 0.00 3.01
227 228 9.936759 AGCCTTATCTTCAATAACTAGCTATTC 57.063 33.333 0.00 0.00 0.00 1.75
231 232 9.148879 TCTTAGCCTTATCTTCAATAACTAGCT 57.851 33.333 0.00 0.00 0.00 3.32
232 233 9.418045 CTCTTAGCCTTATCTTCAATAACTAGC 57.582 37.037 0.00 0.00 0.00 3.42
235 236 9.995003 CATCTCTTAGCCTTATCTTCAATAACT 57.005 33.333 0.00 0.00 0.00 2.24
236 237 9.988815 TCATCTCTTAGCCTTATCTTCAATAAC 57.011 33.333 0.00 0.00 0.00 1.89
237 238 9.988815 GTCATCTCTTAGCCTTATCTTCAATAA 57.011 33.333 0.00 0.00 0.00 1.40
238 239 8.589338 GGTCATCTCTTAGCCTTATCTTCAATA 58.411 37.037 0.00 0.00 0.00 1.90
239 240 7.449247 GGTCATCTCTTAGCCTTATCTTCAAT 58.551 38.462 0.00 0.00 0.00 2.57
240 241 6.183361 GGGTCATCTCTTAGCCTTATCTTCAA 60.183 42.308 0.00 0.00 0.00 2.69
241 242 5.305644 GGGTCATCTCTTAGCCTTATCTTCA 59.694 44.000 0.00 0.00 0.00 3.02
242 243 5.305644 TGGGTCATCTCTTAGCCTTATCTTC 59.694 44.000 0.00 0.00 34.30 2.87
243 244 5.219739 TGGGTCATCTCTTAGCCTTATCTT 58.780 41.667 0.00 0.00 34.30 2.40
244 245 4.820775 TGGGTCATCTCTTAGCCTTATCT 58.179 43.478 0.00 0.00 34.30 1.98
245 246 5.753721 ATGGGTCATCTCTTAGCCTTATC 57.246 43.478 0.00 0.00 34.30 1.75
246 247 6.521527 AAATGGGTCATCTCTTAGCCTTAT 57.478 37.500 0.00 0.00 34.30 1.73
247 248 5.975988 AAATGGGTCATCTCTTAGCCTTA 57.024 39.130 0.00 0.00 34.30 2.69
248 249 4.870021 AAATGGGTCATCTCTTAGCCTT 57.130 40.909 0.00 0.00 34.30 4.35
249 250 4.870021 AAAATGGGTCATCTCTTAGCCT 57.130 40.909 0.00 0.00 34.30 4.58
250 251 6.377146 TGTTTAAAATGGGTCATCTCTTAGCC 59.623 38.462 0.00 0.00 0.00 3.93
251 252 7.391148 TGTTTAAAATGGGTCATCTCTTAGC 57.609 36.000 0.00 0.00 0.00 3.09
283 284 9.624373 AGTCTTGCATGTAATTTAGAGATGATT 57.376 29.630 0.00 0.00 0.00 2.57
284 285 9.624373 AAGTCTTGCATGTAATTTAGAGATGAT 57.376 29.630 0.00 0.00 0.00 2.45
318 319 9.884465 GCATGTAAAATGGTTGATAAGATAGTC 57.116 33.333 0.00 0.00 0.00 2.59
319 320 8.850156 GGCATGTAAAATGGTTGATAAGATAGT 58.150 33.333 0.00 0.00 0.00 2.12
320 321 8.299570 GGGCATGTAAAATGGTTGATAAGATAG 58.700 37.037 0.00 0.00 0.00 2.08
321 322 8.004215 AGGGCATGTAAAATGGTTGATAAGATA 58.996 33.333 0.00 0.00 0.00 1.98
322 323 6.840705 AGGGCATGTAAAATGGTTGATAAGAT 59.159 34.615 0.00 0.00 0.00 2.40
323 324 6.096705 CAGGGCATGTAAAATGGTTGATAAGA 59.903 38.462 0.00 0.00 0.00 2.10
324 325 6.096705 TCAGGGCATGTAAAATGGTTGATAAG 59.903 38.462 0.00 0.00 0.00 1.73
325 326 5.954752 TCAGGGCATGTAAAATGGTTGATAA 59.045 36.000 0.00 0.00 0.00 1.75
326 327 5.359576 GTCAGGGCATGTAAAATGGTTGATA 59.640 40.000 0.00 0.00 0.00 2.15
327 328 4.160252 GTCAGGGCATGTAAAATGGTTGAT 59.840 41.667 0.00 0.00 0.00 2.57
328 329 3.509575 GTCAGGGCATGTAAAATGGTTGA 59.490 43.478 0.00 0.00 0.00 3.18
329 330 3.368323 GGTCAGGGCATGTAAAATGGTTG 60.368 47.826 0.00 0.00 0.00 3.77
330 331 2.831526 GGTCAGGGCATGTAAAATGGTT 59.168 45.455 0.00 0.00 0.00 3.67
331 332 2.456577 GGTCAGGGCATGTAAAATGGT 58.543 47.619 0.00 0.00 0.00 3.55
332 333 1.756538 GGGTCAGGGCATGTAAAATGG 59.243 52.381 0.00 0.00 0.00 3.16
333 334 2.455557 TGGGTCAGGGCATGTAAAATG 58.544 47.619 0.00 0.00 0.00 2.32
334 335 2.831526 GTTGGGTCAGGGCATGTAAAAT 59.168 45.455 0.00 0.00 0.00 1.82
335 336 2.158385 AGTTGGGTCAGGGCATGTAAAA 60.158 45.455 0.00 0.00 0.00 1.52
336 337 1.427368 AGTTGGGTCAGGGCATGTAAA 59.573 47.619 0.00 0.00 0.00 2.01
337 338 1.072266 AGTTGGGTCAGGGCATGTAA 58.928 50.000 0.00 0.00 0.00 2.41
338 339 1.959710 TAGTTGGGTCAGGGCATGTA 58.040 50.000 0.00 0.00 0.00 2.29
339 340 1.072266 TTAGTTGGGTCAGGGCATGT 58.928 50.000 0.00 0.00 0.00 3.21
340 341 2.026641 CATTAGTTGGGTCAGGGCATG 58.973 52.381 0.00 0.00 0.00 4.06
341 342 1.922447 TCATTAGTTGGGTCAGGGCAT 59.078 47.619 0.00 0.00 0.00 4.40
342 343 1.004277 GTCATTAGTTGGGTCAGGGCA 59.996 52.381 0.00 0.00 0.00 5.36
343 344 1.004277 TGTCATTAGTTGGGTCAGGGC 59.996 52.381 0.00 0.00 0.00 5.19
344 345 3.433306 TTGTCATTAGTTGGGTCAGGG 57.567 47.619 0.00 0.00 0.00 4.45
345 346 4.022329 GGTTTTGTCATTAGTTGGGTCAGG 60.022 45.833 0.00 0.00 0.00 3.86
346 347 4.320202 CGGTTTTGTCATTAGTTGGGTCAG 60.320 45.833 0.00 0.00 0.00 3.51
347 348 3.566322 CGGTTTTGTCATTAGTTGGGTCA 59.434 43.478 0.00 0.00 0.00 4.02
348 349 3.816523 TCGGTTTTGTCATTAGTTGGGTC 59.183 43.478 0.00 0.00 0.00 4.46
349 350 3.822940 TCGGTTTTGTCATTAGTTGGGT 58.177 40.909 0.00 0.00 0.00 4.51
350 351 6.503589 TTATCGGTTTTGTCATTAGTTGGG 57.496 37.500 0.00 0.00 0.00 4.12
351 352 8.696175 GTTTTTATCGGTTTTGTCATTAGTTGG 58.304 33.333 0.00 0.00 0.00 3.77
357 358 5.224135 CGGGTTTTTATCGGTTTTGTCATT 58.776 37.500 0.00 0.00 0.00 2.57
387 388 0.508641 GCATATGCTTCCGCGTGTAG 59.491 55.000 20.64 0.92 39.65 2.74
440 443 2.430694 GTGGCTTGAAGAGTTGGGTTTT 59.569 45.455 0.00 0.00 0.00 2.43
444 447 0.954452 GTGTGGCTTGAAGAGTTGGG 59.046 55.000 0.00 0.00 0.00 4.12
445 448 1.334869 GTGTGTGGCTTGAAGAGTTGG 59.665 52.381 0.00 0.00 0.00 3.77
457 460 2.412937 GCTTGTGGTGTGTGTGGC 59.587 61.111 0.00 0.00 0.00 5.01
1040 1047 2.966309 GAACCCAAAGACTGCGGCG 61.966 63.158 0.51 0.51 0.00 6.46
1082 1089 2.434702 GGGGTTCGACTAATCACTGGAT 59.565 50.000 0.00 0.00 34.43 3.41
1083 1090 1.829222 GGGGTTCGACTAATCACTGGA 59.171 52.381 0.00 0.00 0.00 3.86
1084 1091 1.553248 TGGGGTTCGACTAATCACTGG 59.447 52.381 0.00 0.00 0.00 4.00
1088 1095 2.901192 TCAAGTGGGGTTCGACTAATCA 59.099 45.455 0.00 0.00 31.59 2.57
1150 1157 1.842007 CAGGGGTGGATCTGGATGG 59.158 63.158 0.00 0.00 0.00 3.51
1193 1202 6.369340 GTGGCTCATTCAGATATCAATCTCAG 59.631 42.308 5.32 0.00 40.65 3.35
1206 1215 1.073964 CTCACACGTGGCTCATTCAG 58.926 55.000 21.57 0.00 0.00 3.02
1208 1217 1.795768 TTCTCACACGTGGCTCATTC 58.204 50.000 21.57 0.00 0.00 2.67
1209 1218 2.079158 CATTCTCACACGTGGCTCATT 58.921 47.619 21.57 0.00 0.00 2.57
1210 1219 1.276138 TCATTCTCACACGTGGCTCAT 59.724 47.619 21.57 2.08 0.00 2.90
1211 1220 0.678950 TCATTCTCACACGTGGCTCA 59.321 50.000 21.57 0.00 0.00 4.26
1212 1221 1.662629 CATCATTCTCACACGTGGCTC 59.337 52.381 21.57 0.00 0.00 4.70
1213 1222 1.730501 CATCATTCTCACACGTGGCT 58.269 50.000 21.57 0.00 0.00 4.75
1215 1224 1.441738 TGCATCATTCTCACACGTGG 58.558 50.000 21.57 9.11 0.00 4.94
1302 1318 4.199432 AGATTGACCACAACTCTGCTAG 57.801 45.455 0.00 0.00 38.90 3.42
1315 1331 0.919710 AGCACCCCCTTAGATTGACC 59.080 55.000 0.00 0.00 0.00 4.02
1327 1343 3.223589 AAACGCACCAAGCACCCC 61.224 61.111 0.00 0.00 46.13 4.95
1389 1413 4.545823 TTTTGGCCTAAAGATTATCGCG 57.454 40.909 8.37 0.00 0.00 5.87
1391 1415 6.036735 TCTCGTTTTTGGCCTAAAGATTATCG 59.963 38.462 12.16 11.01 0.00 2.92
1392 1416 7.316544 TCTCGTTTTTGGCCTAAAGATTATC 57.683 36.000 12.16 1.26 0.00 1.75
1412 1436 9.869844 CTTAAATGCCTAAACAGAATTATCTCG 57.130 33.333 0.00 0.00 32.03 4.04
1430 1524 3.385193 ACCAAACCACTGCTTAAATGC 57.615 42.857 0.00 0.00 0.00 3.56
1431 1525 6.084326 ACTAACCAAACCACTGCTTAAATG 57.916 37.500 0.00 0.00 0.00 2.32
1432 1526 6.549736 AGAACTAACCAAACCACTGCTTAAAT 59.450 34.615 0.00 0.00 0.00 1.40
1433 1527 5.889289 AGAACTAACCAAACCACTGCTTAAA 59.111 36.000 0.00 0.00 0.00 1.52
1434 1528 5.298276 CAGAACTAACCAAACCACTGCTTAA 59.702 40.000 0.00 0.00 0.00 1.85
1437 1531 3.214328 CAGAACTAACCAAACCACTGCT 58.786 45.455 0.00 0.00 0.00 4.24
1463 1557 7.417116 GCTGAATGAAATCACAGGATAACCAAT 60.417 37.037 0.00 0.00 38.94 3.16
1464 1558 6.127647 GCTGAATGAAATCACAGGATAACCAA 60.128 38.462 0.00 0.00 38.94 3.67
1473 1567 7.080353 TGTGAATAGCTGAATGAAATCACAG 57.920 36.000 0.00 0.00 40.48 3.66
1479 1573 5.416639 ACATGCTGTGAATAGCTGAATGAAA 59.583 36.000 0.00 0.00 44.01 2.69
1530 1625 9.874215 GCTAAACTCTAAACATAAGACGTTTTT 57.126 29.630 0.00 0.00 37.69 1.94
1531 1626 8.501580 GGCTAAACTCTAAACATAAGACGTTTT 58.498 33.333 0.00 0.00 37.69 2.43
1532 1627 7.876582 AGGCTAAACTCTAAACATAAGACGTTT 59.123 33.333 0.00 0.00 39.75 3.60
1533 1628 7.384477 AGGCTAAACTCTAAACATAAGACGTT 58.616 34.615 0.00 0.00 0.00 3.99
1534 1629 6.932947 AGGCTAAACTCTAAACATAAGACGT 58.067 36.000 0.00 0.00 0.00 4.34
1536 1631 9.649167 TTGTAGGCTAAACTCTAAACATAAGAC 57.351 33.333 0.00 0.00 0.00 3.01
1541 1636 8.287503 CGTTTTTGTAGGCTAAACTCTAAACAT 58.712 33.333 0.00 0.00 31.33 2.71
1542 1637 7.280652 ACGTTTTTGTAGGCTAAACTCTAAACA 59.719 33.333 0.00 0.00 31.33 2.83
1543 1638 7.633621 ACGTTTTTGTAGGCTAAACTCTAAAC 58.366 34.615 0.00 1.60 31.33 2.01
1544 1639 7.712205 AGACGTTTTTGTAGGCTAAACTCTAAA 59.288 33.333 0.00 0.00 31.33 1.85
1545 1640 7.212274 AGACGTTTTTGTAGGCTAAACTCTAA 58.788 34.615 0.00 0.00 31.33 2.10
1546 1641 6.752168 AGACGTTTTTGTAGGCTAAACTCTA 58.248 36.000 0.00 0.00 31.33 2.43
1547 1642 5.608449 AGACGTTTTTGTAGGCTAAACTCT 58.392 37.500 0.00 2.04 31.33 3.24
1548 1643 5.919272 AGACGTTTTTGTAGGCTAAACTC 57.081 39.130 0.00 0.00 31.33 3.01
1549 1644 7.974482 ATAAGACGTTTTTGTAGGCTAAACT 57.026 32.000 0.00 0.00 31.33 2.66
1550 1645 9.911980 GATATAAGACGTTTTTGTAGGCTAAAC 57.088 33.333 0.00 0.00 0.00 2.01
1555 1650 8.546244 GGTTAGATATAAGACGTTTTTGTAGGC 58.454 37.037 0.00 0.00 0.00 3.93
1556 1651 9.813446 AGGTTAGATATAAGACGTTTTTGTAGG 57.187 33.333 0.00 0.00 0.00 3.18
1590 1685 4.034510 GCCTCCGTCTCAAAACATAAGATG 59.965 45.833 0.00 0.00 0.00 2.90
1592 1687 3.007506 TGCCTCCGTCTCAAAACATAAGA 59.992 43.478 0.00 0.00 0.00 2.10
1593 1688 3.334691 TGCCTCCGTCTCAAAACATAAG 58.665 45.455 0.00 0.00 0.00 1.73
1594 1689 3.244422 ACTGCCTCCGTCTCAAAACATAA 60.244 43.478 0.00 0.00 0.00 1.90
1595 1690 2.301870 ACTGCCTCCGTCTCAAAACATA 59.698 45.455 0.00 0.00 0.00 2.29
1598 1693 2.029290 TCTACTGCCTCCGTCTCAAAAC 60.029 50.000 0.00 0.00 0.00 2.43
1599 1694 2.029290 GTCTACTGCCTCCGTCTCAAAA 60.029 50.000 0.00 0.00 0.00 2.44
1600 1695 1.544691 GTCTACTGCCTCCGTCTCAAA 59.455 52.381 0.00 0.00 0.00 2.69
1601 1696 1.174783 GTCTACTGCCTCCGTCTCAA 58.825 55.000 0.00 0.00 0.00 3.02
1602 1697 0.328592 AGTCTACTGCCTCCGTCTCA 59.671 55.000 0.00 0.00 0.00 3.27
1603 1698 2.328819 TAGTCTACTGCCTCCGTCTC 57.671 55.000 0.00 0.00 0.00 3.36
1604 1699 3.496515 GGTATAGTCTACTGCCTCCGTCT 60.497 52.174 0.00 0.00 0.00 4.18
1605 1700 2.813172 GGTATAGTCTACTGCCTCCGTC 59.187 54.545 0.00 0.00 0.00 4.79
1606 1701 2.174210 TGGTATAGTCTACTGCCTCCGT 59.826 50.000 0.00 0.00 0.00 4.69
1607 1702 2.860009 TGGTATAGTCTACTGCCTCCG 58.140 52.381 0.00 0.00 0.00 4.63
1608 1703 4.408276 TGATGGTATAGTCTACTGCCTCC 58.592 47.826 0.00 0.00 0.00 4.30
1609 1704 5.074115 ACTGATGGTATAGTCTACTGCCTC 58.926 45.833 0.00 0.00 0.00 4.70
1610 1705 5.068215 ACTGATGGTATAGTCTACTGCCT 57.932 43.478 0.00 0.00 0.00 4.75
1611 1706 5.793030 AACTGATGGTATAGTCTACTGCC 57.207 43.478 0.00 0.00 0.00 4.85
1612 1707 7.982354 AGAAAAACTGATGGTATAGTCTACTGC 59.018 37.037 0.00 0.00 0.00 4.40
1613 1708 9.877178 AAGAAAAACTGATGGTATAGTCTACTG 57.123 33.333 0.00 0.00 0.00 2.74
1649 1744 8.243426 GCTGTATTTTTCAATCTTGTACATGGA 58.757 33.333 8.74 5.37 0.00 3.41
1657 1752 7.318141 AGATGTGGCTGTATTTTTCAATCTTG 58.682 34.615 0.00 0.00 0.00 3.02
1675 1771 6.824305 ACATTTTGAGGAAGTTAGATGTGG 57.176 37.500 0.00 0.00 0.00 4.17
1691 1787 4.324267 AGAAACGGAGGGAGTACATTTTG 58.676 43.478 0.00 0.00 0.00 2.44
1692 1788 4.635699 AGAAACGGAGGGAGTACATTTT 57.364 40.909 0.00 0.00 0.00 1.82
1700 1796 4.571176 GCTTGTATTTAGAAACGGAGGGAG 59.429 45.833 0.00 0.00 0.00 4.30
1702 1798 3.626217 GGCTTGTATTTAGAAACGGAGGG 59.374 47.826 0.00 0.00 0.00 4.30
1703 1799 4.514401 AGGCTTGTATTTAGAAACGGAGG 58.486 43.478 0.00 0.00 0.00 4.30
1704 1800 6.496338 AAAGGCTTGTATTTAGAAACGGAG 57.504 37.500 0.00 0.00 0.00 4.63
1705 1801 6.887626 AAAAGGCTTGTATTTAGAAACGGA 57.112 33.333 0.00 0.00 0.00 4.69
1706 1802 8.508875 TCTAAAAAGGCTTGTATTTAGAAACGG 58.491 33.333 21.64 4.97 39.89 4.44
1707 1803 9.543018 CTCTAAAAAGGCTTGTATTTAGAAACG 57.457 33.333 22.99 13.87 41.34 3.60
1719 1815 9.578439 CCTTATTGAAATCTCTAAAAAGGCTTG 57.422 33.333 0.00 0.00 0.00 4.01
1720 1816 9.533831 TCCTTATTGAAATCTCTAAAAAGGCTT 57.466 29.630 0.00 0.00 32.75 4.35
1721 1817 8.961634 GTCCTTATTGAAATCTCTAAAAAGGCT 58.038 33.333 0.00 0.00 32.75 4.58
1722 1818 8.961634 AGTCCTTATTGAAATCTCTAAAAAGGC 58.038 33.333 0.00 0.00 32.75 4.35
1730 1826 8.361139 CCGTATGTAGTCCTTATTGAAATCTCT 58.639 37.037 0.00 0.00 0.00 3.10
1731 1827 8.358148 TCCGTATGTAGTCCTTATTGAAATCTC 58.642 37.037 0.00 0.00 0.00 2.75
1732 1828 8.246430 TCCGTATGTAGTCCTTATTGAAATCT 57.754 34.615 0.00 0.00 0.00 2.40
1733 1829 8.926710 CATCCGTATGTAGTCCTTATTGAAATC 58.073 37.037 0.00 0.00 0.00 2.17
1734 1830 8.429641 ACATCCGTATGTAGTCCTTATTGAAAT 58.570 33.333 0.00 0.00 44.66 2.17
1735 1831 7.788026 ACATCCGTATGTAGTCCTTATTGAAA 58.212 34.615 0.00 0.00 44.66 2.69
1736 1832 7.356089 ACATCCGTATGTAGTCCTTATTGAA 57.644 36.000 0.00 0.00 44.66 2.69
1737 1833 6.971726 ACATCCGTATGTAGTCCTTATTGA 57.028 37.500 0.00 0.00 44.66 2.57
1758 1854 9.888878 GCACAGTCTAAAATACGTCTATATACA 57.111 33.333 0.00 0.00 0.00 2.29
1761 1857 8.847196 TCAGCACAGTCTAAAATACGTCTATAT 58.153 33.333 0.00 0.00 0.00 0.86
1762 1858 8.217131 TCAGCACAGTCTAAAATACGTCTATA 57.783 34.615 0.00 0.00 0.00 1.31
1763 1859 7.096884 TCAGCACAGTCTAAAATACGTCTAT 57.903 36.000 0.00 0.00 0.00 1.98
1764 1860 6.505044 TCAGCACAGTCTAAAATACGTCTA 57.495 37.500 0.00 0.00 0.00 2.59
1765 1861 5.386958 TCAGCACAGTCTAAAATACGTCT 57.613 39.130 0.00 0.00 0.00 4.18
1766 1862 5.634020 ACTTCAGCACAGTCTAAAATACGTC 59.366 40.000 0.00 0.00 0.00 4.34
1767 1863 5.539048 ACTTCAGCACAGTCTAAAATACGT 58.461 37.500 0.00 0.00 0.00 3.57
1768 1864 6.299604 CAACTTCAGCACAGTCTAAAATACG 58.700 40.000 0.00 0.00 0.00 3.06
1769 1865 6.073003 AGCAACTTCAGCACAGTCTAAAATAC 60.073 38.462 0.00 0.00 0.00 1.89
1770 1866 5.997746 AGCAACTTCAGCACAGTCTAAAATA 59.002 36.000 0.00 0.00 0.00 1.40
1771 1867 4.823989 AGCAACTTCAGCACAGTCTAAAAT 59.176 37.500 0.00 0.00 0.00 1.82
1772 1868 4.199310 AGCAACTTCAGCACAGTCTAAAA 58.801 39.130 0.00 0.00 0.00 1.52
1773 1869 3.808728 AGCAACTTCAGCACAGTCTAAA 58.191 40.909 0.00 0.00 0.00 1.85
1774 1870 3.181466 TGAGCAACTTCAGCACAGTCTAA 60.181 43.478 0.00 0.00 0.00 2.10
1775 1871 2.365293 TGAGCAACTTCAGCACAGTCTA 59.635 45.455 0.00 0.00 0.00 2.59
1776 1872 1.139654 TGAGCAACTTCAGCACAGTCT 59.860 47.619 0.00 0.00 0.00 3.24
1777 1873 1.586422 TGAGCAACTTCAGCACAGTC 58.414 50.000 0.00 0.00 0.00 3.51
1988 2084 3.129638 GCTTTTGGTTATCATTACCCGCA 59.870 43.478 0.00 0.00 34.66 5.69
2020 2116 3.668141 TCCATGGCAGGTTGTATCATT 57.332 42.857 6.96 0.00 0.00 2.57
2022 2118 3.668141 AATCCATGGCAGGTTGTATCA 57.332 42.857 6.96 0.00 0.00 2.15
2023 2119 3.491447 GCAAATCCATGGCAGGTTGTATC 60.491 47.826 6.96 0.00 0.00 2.24
2026 2122 0.609662 GCAAATCCATGGCAGGTTGT 59.390 50.000 6.96 0.00 0.00 3.32
2027 2123 0.899720 AGCAAATCCATGGCAGGTTG 59.100 50.000 6.96 9.26 0.00 3.77
2028 2124 0.899720 CAGCAAATCCATGGCAGGTT 59.100 50.000 6.96 0.00 0.00 3.50
2031 2127 0.744874 CTCCAGCAAATCCATGGCAG 59.255 55.000 6.96 0.00 33.92 4.85
2152 2248 8.711457 GCAAAACTTATTTATTGTGAATGCAGT 58.289 29.630 0.00 0.00 0.00 4.40
2154 2250 7.658982 TGGCAAAACTTATTTATTGTGAATGCA 59.341 29.630 0.00 0.00 0.00 3.96
2235 2334 9.531158 AATCAAGAAGAAGAAGAAAATCAGGAT 57.469 29.630 0.00 0.00 0.00 3.24
2236 2335 8.790718 CAATCAAGAAGAAGAAGAAAATCAGGA 58.209 33.333 0.00 0.00 0.00 3.86
2237 2336 8.574737 ACAATCAAGAAGAAGAAGAAAATCAGG 58.425 33.333 0.00 0.00 0.00 3.86
2242 2341 8.872845 GCAAAACAATCAAGAAGAAGAAGAAAA 58.127 29.630 0.00 0.00 0.00 2.29
2246 2345 6.640092 GGAGCAAAACAATCAAGAAGAAGAAG 59.360 38.462 0.00 0.00 0.00 2.85
2255 2354 4.524316 TCATGGGAGCAAAACAATCAAG 57.476 40.909 0.00 0.00 0.00 3.02
2283 2382 2.648059 GGGCACTTCAGCACTGATTAT 58.352 47.619 0.31 0.00 39.64 1.28
2284 2383 2.113860 GGGCACTTCAGCACTGATTA 57.886 50.000 0.31 0.00 39.64 1.75
2285 2384 2.952714 GGGCACTTCAGCACTGATT 58.047 52.632 0.31 0.00 39.64 2.57
2320 2421 4.214545 CCGTTTAGACACAGCAATTTGGTA 59.785 41.667 0.00 0.00 0.00 3.25
2329 2430 2.067013 GAGGAACCGTTTAGACACAGC 58.933 52.381 0.00 0.00 0.00 4.40
2331 2432 2.696707 ACTGAGGAACCGTTTAGACACA 59.303 45.455 0.00 0.00 0.00 3.72
2333 2434 5.291971 GTTTACTGAGGAACCGTTTAGACA 58.708 41.667 0.00 0.00 0.00 3.41
2334 2435 4.383948 CGTTTACTGAGGAACCGTTTAGAC 59.616 45.833 0.00 0.00 0.00 2.59
2335 2436 4.549458 CGTTTACTGAGGAACCGTTTAGA 58.451 43.478 0.00 0.00 0.00 2.10
2337 2438 3.069443 ACCGTTTACTGAGGAACCGTTTA 59.931 43.478 0.00 0.00 0.00 2.01
2338 2439 2.158914 ACCGTTTACTGAGGAACCGTTT 60.159 45.455 0.00 0.00 0.00 3.60
2339 2440 1.413812 ACCGTTTACTGAGGAACCGTT 59.586 47.619 0.00 0.00 0.00 4.44
2340 2441 1.043022 ACCGTTTACTGAGGAACCGT 58.957 50.000 0.00 0.00 0.00 4.83
2412 2534 2.553602 TGAGCAACATAGCCAAACAGTG 59.446 45.455 0.00 0.00 34.23 3.66
2413 2535 2.554032 GTGAGCAACATAGCCAAACAGT 59.446 45.455 0.00 0.00 34.23 3.55
2415 2537 2.862541 AGTGAGCAACATAGCCAAACA 58.137 42.857 0.00 0.00 34.23 2.83
2416 2538 3.568538 CAAGTGAGCAACATAGCCAAAC 58.431 45.455 0.00 0.00 34.23 2.93
2418 2540 1.541147 GCAAGTGAGCAACATAGCCAA 59.459 47.619 0.00 0.00 34.23 4.52
2429 2551 4.082026 AGGAATTTACCATTGCAAGTGAGC 60.082 41.667 4.94 0.00 0.00 4.26
2430 2552 5.183713 TCAGGAATTTACCATTGCAAGTGAG 59.816 40.000 4.94 0.00 0.00 3.51
2431 2553 5.076182 TCAGGAATTTACCATTGCAAGTGA 58.924 37.500 4.94 0.00 0.00 3.41
2443 2565 4.880696 AGAATCAGCTGCTCAGGAATTTAC 59.119 41.667 9.47 0.00 0.00 2.01
2516 2638 2.030540 CCAACATCACCAGACAGCAAAG 60.031 50.000 0.00 0.00 0.00 2.77
2524 2646 1.357137 TAGGCACCAACATCACCAGA 58.643 50.000 0.00 0.00 0.00 3.86
2525 2647 2.292267 GATAGGCACCAACATCACCAG 58.708 52.381 0.00 0.00 0.00 4.00
2588 2710 7.658575 CAGGATGAAAAAGGAAAATCATTGTGT 59.341 33.333 0.00 0.00 39.69 3.72
2589 2711 7.874016 TCAGGATGAAAAAGGAAAATCATTGTG 59.126 33.333 0.00 0.00 45.97 3.33
2609 2731 0.341258 TCTCAGCCTTCCCTCAGGAT 59.659 55.000 0.00 0.00 43.54 3.24
2610 2732 0.616111 GTCTCAGCCTTCCCTCAGGA 60.616 60.000 0.00 0.00 41.88 3.86
2611 2733 0.906756 TGTCTCAGCCTTCCCTCAGG 60.907 60.000 0.00 0.00 36.95 3.86
2612 2734 0.979665 TTGTCTCAGCCTTCCCTCAG 59.020 55.000 0.00 0.00 0.00 3.35
2613 2735 0.979665 CTTGTCTCAGCCTTCCCTCA 59.020 55.000 0.00 0.00 0.00 3.86
2614 2736 0.251634 CCTTGTCTCAGCCTTCCCTC 59.748 60.000 0.00 0.00 0.00 4.30
2656 2779 7.479980 TGATATTAGTAGCATTTGGTTTGTGC 58.520 34.615 0.00 0.00 39.10 4.57
2710 2837 7.444183 GCAGCCCTTAAATAATCACAGTACATA 59.556 37.037 0.00 0.00 0.00 2.29
2735 2872 3.969802 ACTGCTTGTTGCTGCGGC 61.970 61.111 11.65 11.65 43.25 6.53
2773 2964 1.571457 CCTCCCCTCCTCTCTAACTGA 59.429 57.143 0.00 0.00 0.00 3.41
2776 2967 2.604139 CATCCTCCCCTCCTCTCTAAC 58.396 57.143 0.00 0.00 0.00 2.34
2777 2968 1.133009 GCATCCTCCCCTCCTCTCTAA 60.133 57.143 0.00 0.00 0.00 2.10
2779 2970 1.235696 GCATCCTCCCCTCCTCTCT 59.764 63.158 0.00 0.00 0.00 3.10
2781 2972 1.074623 CAGCATCCTCCCCTCCTCT 60.075 63.158 0.00 0.00 0.00 3.69
2782 2973 0.985490 AACAGCATCCTCCCCTCCTC 60.985 60.000 0.00 0.00 0.00 3.71
2805 3296 6.323739 GGCTTCAATTCCAATCACCCTAATAA 59.676 38.462 0.00 0.00 0.00 1.40
2806 3297 5.833131 GGCTTCAATTCCAATCACCCTAATA 59.167 40.000 0.00 0.00 0.00 0.98
2807 3298 4.651045 GGCTTCAATTCCAATCACCCTAAT 59.349 41.667 0.00 0.00 0.00 1.73
2809 3300 3.627237 GGGCTTCAATTCCAATCACCCTA 60.627 47.826 0.00 0.00 31.84 3.53
2810 3301 2.460669 GGCTTCAATTCCAATCACCCT 58.539 47.619 0.00 0.00 0.00 4.34
2811 3302 1.482182 GGGCTTCAATTCCAATCACCC 59.518 52.381 0.00 0.00 0.00 4.61
2812 3303 2.178580 TGGGCTTCAATTCCAATCACC 58.821 47.619 0.00 0.00 0.00 4.02
2813 3304 4.476628 AATGGGCTTCAATTCCAATCAC 57.523 40.909 0.00 0.00 33.90 3.06
2814 3305 5.088680 GAAATGGGCTTCAATTCCAATCA 57.911 39.130 0.00 0.00 33.90 2.57
2891 3386 5.301835 TGGAATTCCAATTTTGCTCCAAA 57.698 34.783 25.13 0.00 44.35 3.28
2897 3392 3.929094 TCAGCTGGAATTCCAATTTTGC 58.071 40.909 26.87 24.16 46.97 3.68
2899 3394 5.305128 TCAGTTCAGCTGGAATTCCAATTTT 59.695 36.000 26.87 10.64 46.97 1.82
2900 3395 4.834496 TCAGTTCAGCTGGAATTCCAATTT 59.166 37.500 26.87 13.01 46.97 1.82
2925 3663 0.308993 GGTCTTGTGTGCTTCAGTGC 59.691 55.000 0.00 0.00 0.00 4.40
2930 3668 2.622942 TGGAAATGGTCTTGTGTGCTTC 59.377 45.455 0.00 0.00 0.00 3.86
2931 3669 2.624838 CTGGAAATGGTCTTGTGTGCTT 59.375 45.455 0.00 0.00 0.00 3.91
2932 3670 2.233271 CTGGAAATGGTCTTGTGTGCT 58.767 47.619 0.00 0.00 0.00 4.40
2937 3686 2.787994 CTCAGCTGGAAATGGTCTTGT 58.212 47.619 15.13 0.00 0.00 3.16
2956 3705 7.781324 TCCAATTTTTCTTCCAATTCTAGCT 57.219 32.000 0.00 0.00 0.00 3.32
2962 3711 8.439172 TCTGGAATTCCAATTTTTCTTCCAATT 58.561 29.630 26.87 0.00 46.97 2.32
2963 3712 7.976712 TCTGGAATTCCAATTTTTCTTCCAAT 58.023 30.769 26.87 0.00 46.97 3.16
2964 3713 7.071071 ACTCTGGAATTCCAATTTTTCTTCCAA 59.929 33.333 26.87 0.06 46.97 3.53
2965 3714 6.554605 ACTCTGGAATTCCAATTTTTCTTCCA 59.445 34.615 26.87 2.02 46.97 3.53
2966 3715 6.997655 ACTCTGGAATTCCAATTTTTCTTCC 58.002 36.000 26.87 0.00 46.97 3.46
2967 3716 7.386025 CCAACTCTGGAATTCCAATTTTTCTTC 59.614 37.037 26.87 0.00 46.92 2.87
2968 3717 7.219322 CCAACTCTGGAATTCCAATTTTTCTT 58.781 34.615 26.87 9.37 46.92 2.52
2969 3718 6.762333 CCAACTCTGGAATTCCAATTTTTCT 58.238 36.000 26.87 6.46 46.92 2.52
2988 3737 3.152341 CAGTTCAGCTGGATTTCCAACT 58.848 45.455 15.13 11.20 46.97 3.16
2989 3738 3.149196 TCAGTTCAGCTGGATTTCCAAC 58.851 45.455 15.13 8.94 46.97 3.77
2991 3740 3.415212 CTTCAGTTCAGCTGGATTTCCA 58.585 45.455 15.13 0.00 45.08 3.53
2992 3741 2.163211 GCTTCAGTTCAGCTGGATTTCC 59.837 50.000 15.13 0.00 45.08 3.13
2994 3743 2.555757 GTGCTTCAGTTCAGCTGGATTT 59.444 45.455 15.13 0.00 45.08 2.17
2995 3744 2.157738 GTGCTTCAGTTCAGCTGGATT 58.842 47.619 15.13 0.00 45.08 3.01
2996 3745 1.072806 TGTGCTTCAGTTCAGCTGGAT 59.927 47.619 15.13 0.00 45.08 3.41
2997 3746 0.469494 TGTGCTTCAGTTCAGCTGGA 59.531 50.000 15.13 0.46 45.08 3.86
2998 3747 0.590195 GTGTGCTTCAGTTCAGCTGG 59.410 55.000 15.13 0.00 45.08 4.85
2999 3748 1.302366 TGTGTGCTTCAGTTCAGCTG 58.698 50.000 7.63 7.63 46.34 4.24
3002 3751 1.002033 GGCTTGTGTGCTTCAGTTCAG 60.002 52.381 0.00 0.00 0.00 3.02
3003 3752 1.024271 GGCTTGTGTGCTTCAGTTCA 58.976 50.000 0.00 0.00 0.00 3.18
3005 3754 0.395586 TGGGCTTGTGTGCTTCAGTT 60.396 50.000 0.00 0.00 0.00 3.16
3006 3755 0.178981 ATGGGCTTGTGTGCTTCAGT 60.179 50.000 0.00 0.00 0.00 3.41
3007 3756 0.963962 AATGGGCTTGTGTGCTTCAG 59.036 50.000 0.00 0.00 0.00 3.02
3008 3757 1.340889 GAAATGGGCTTGTGTGCTTCA 59.659 47.619 0.00 0.00 0.00 3.02
3009 3758 1.337167 GGAAATGGGCTTGTGTGCTTC 60.337 52.381 0.00 0.00 0.00 3.86
3012 3761 0.037975 CTGGAAATGGGCTTGTGTGC 60.038 55.000 0.00 0.00 0.00 4.57
3014 3763 1.688197 CAACTGGAAATGGGCTTGTGT 59.312 47.619 0.00 0.00 0.00 3.72
3016 3765 2.242043 CTCAACTGGAAATGGGCTTGT 58.758 47.619 0.00 0.00 0.00 3.16
3017 3766 1.067354 GCTCAACTGGAAATGGGCTTG 60.067 52.381 0.00 0.00 39.96 4.01
3019 3768 2.967270 GCTCAACTGGAAATGGGCT 58.033 52.632 0.00 0.00 39.96 5.19
3021 3770 3.634397 TCTAGCTCAACTGGAAATGGG 57.366 47.619 0.00 0.00 32.07 4.00
3023 3772 4.394300 CCACTTCTAGCTCAACTGGAAATG 59.606 45.833 0.00 0.00 44.34 2.32
3024 3773 4.287067 TCCACTTCTAGCTCAACTGGAAAT 59.713 41.667 0.00 0.00 44.34 2.17
3025 3774 3.646162 TCCACTTCTAGCTCAACTGGAAA 59.354 43.478 0.00 0.00 44.34 3.13
3027 3776 2.889512 TCCACTTCTAGCTCAACTGGA 58.110 47.619 0.00 0.00 33.39 3.86
3028 3777 3.685139 TTCCACTTCTAGCTCAACTGG 57.315 47.619 0.00 0.00 0.00 4.00
3029 3778 5.240891 TCAATTCCACTTCTAGCTCAACTG 58.759 41.667 0.00 0.00 0.00 3.16
3030 3779 5.489792 TCAATTCCACTTCTAGCTCAACT 57.510 39.130 0.00 0.00 0.00 3.16
3031 3780 5.391416 GCTTCAATTCCACTTCTAGCTCAAC 60.391 44.000 0.00 0.00 0.00 3.18
3043 3792 2.099098 CGGTTATGGGCTTCAATTCCAC 59.901 50.000 0.00 0.00 32.90 4.02
3128 3887 2.708132 TAGGGGAGGGGAGGGGAG 60.708 72.222 0.00 0.00 0.00 4.30
3129 3888 3.040814 GTAGGGGAGGGGAGGGGA 61.041 72.222 0.00 0.00 0.00 4.81


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.