Multiple sequence alignment - TraesCS7D01G092100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G092100 chr7D 100.000 3329 0 0 1 3329 55075071 55071743 0.000000e+00 6148.0
1 TraesCS7D01G092100 chr7A 91.225 2792 185 26 1 2769 58841368 58844122 0.000000e+00 3744.0
2 TraesCS7D01G092100 chr6D 85.189 1823 207 28 978 2770 98031146 98032935 0.000000e+00 1812.0
3 TraesCS7D01G092100 chr6B 84.071 1921 230 32 978 2868 183279528 183281402 0.000000e+00 1783.0
4 TraesCS7D01G092100 chr6A 83.971 1909 247 31 978 2868 117056821 117058688 0.000000e+00 1775.0
5 TraesCS7D01G092100 chr6A 98.824 85 1 0 3245 3329 70934037 70933953 5.750000e-33 152.0
6 TraesCS7D01G092100 chr3A 89.866 523 48 4 233 755 728270976 728271493 0.000000e+00 667.0
7 TraesCS7D01G092100 chr3A 96.154 52 2 0 1132 1183 728271495 728271546 5.920000e-13 86.1
8 TraesCS7D01G092100 chr4A 93.143 175 11 1 3069 3243 670974325 670974498 4.260000e-64 255.0
9 TraesCS7D01G092100 chr2B 75.683 366 65 16 90 445 632520485 632520134 9.560000e-36 161.0
10 TraesCS7D01G092100 chr5B 98.810 84 1 0 3246 3329 501473760 501473677 2.070000e-32 150.0
11 TraesCS7D01G092100 chr5B 76.667 240 38 11 85 315 679964445 679964675 2.100000e-22 117.0
12 TraesCS7D01G092100 chr7B 94.792 96 4 1 3234 3329 297402306 297402212 7.440000e-32 148.0
13 TraesCS7D01G092100 chr7B 98.795 83 1 0 3247 3329 730205222 730205140 7.440000e-32 148.0
14 TraesCS7D01G092100 chr7B 97.647 85 2 0 3245 3329 614401866 614401782 2.680000e-31 147.0
15 TraesCS7D01G092100 chr1D 96.667 90 2 1 3240 3329 19774674 19774762 7.440000e-32 148.0
16 TraesCS7D01G092100 chr1D 97.647 85 2 0 3245 3329 414643238 414643322 2.680000e-31 147.0
17 TraesCS7D01G092100 chr3B 93.000 100 4 3 3233 3329 129718521 129718422 3.460000e-30 143.0
18 TraesCS7D01G092100 chr3D 94.505 91 5 0 3239 3329 107065504 107065414 1.250000e-29 141.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G092100 chr7D 55071743 55075071 3328 True 6148.00 6148 100.000 1 3329 1 chr7D.!!$R1 3328
1 TraesCS7D01G092100 chr7A 58841368 58844122 2754 False 3744.00 3744 91.225 1 2769 1 chr7A.!!$F1 2768
2 TraesCS7D01G092100 chr6D 98031146 98032935 1789 False 1812.00 1812 85.189 978 2770 1 chr6D.!!$F1 1792
3 TraesCS7D01G092100 chr6B 183279528 183281402 1874 False 1783.00 1783 84.071 978 2868 1 chr6B.!!$F1 1890
4 TraesCS7D01G092100 chr6A 117056821 117058688 1867 False 1775.00 1775 83.971 978 2868 1 chr6A.!!$F1 1890
5 TraesCS7D01G092100 chr3A 728270976 728271546 570 False 376.55 667 93.010 233 1183 2 chr3A.!!$F1 950

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
783 795 0.171231 GAATGCCCCGAGCTTGAAAC 59.829 55.0 1.22 0.00 44.23 2.78 F
1423 1436 0.250727 TGGTTTTGCGAGGCTAGCTT 60.251 50.0 20.26 6.94 35.28 3.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2070 2083 0.176910 TCGCACACACCTCAAAGTCA 59.823 50.0 0.0 0.0 0.00 3.41 R
2849 2910 0.110486 GGAGCTTGGAACTTCCCACA 59.890 55.0 5.3 0.0 35.03 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 4.571250 CTGCGAGTTGGAGCGTTA 57.429 55.556 0.00 0.00 35.87 3.18
43 44 4.100808 ACCCTATGAAAGATCTGCTCAGAC 59.899 45.833 12.08 0.00 40.75 3.51
52 53 5.317600 AGATCTGCTCAGACTAGGTATGA 57.682 43.478 1.15 0.00 40.75 2.15
54 55 5.769662 AGATCTGCTCAGACTAGGTATGAAG 59.230 44.000 1.15 0.00 40.75 3.02
59 60 4.202070 GCTCAGACTAGGTATGAAGGACAC 60.202 50.000 0.00 0.00 33.32 3.67
70 71 3.245668 AAGGACACCGGCTCAGCTG 62.246 63.158 7.63 7.63 34.23 4.24
82 83 0.873054 CTCAGCTGCTGTGTTCTTGG 59.127 55.000 27.24 0.44 32.61 3.61
127 130 3.814283 CAGCTTCTGCCAGATCTAAATCC 59.186 47.826 0.00 0.00 40.80 3.01
132 135 6.519721 GCTTCTGCCAGATCTAAATCCATAGA 60.520 42.308 0.00 0.00 36.41 1.98
135 138 6.327365 TCTGCCAGATCTAAATCCATAGACAA 59.673 38.462 0.00 0.00 34.86 3.18
137 140 6.994496 TGCCAGATCTAAATCCATAGACAAAG 59.006 38.462 0.00 0.00 34.86 2.77
194 197 8.789825 ATATGATTTGCAAAGCCATTTGTTAA 57.210 26.923 23.58 10.26 46.26 2.01
238 241 5.380043 TCTCTCCTGCAAAAGTCAAGATTT 58.620 37.500 0.00 0.00 0.00 2.17
315 326 2.761208 AGTGACCAGTATGTCAGGCTAC 59.239 50.000 0.00 0.00 45.40 3.58
410 421 6.070366 AGGTGGTGTTAGGATAGTTAAACTCC 60.070 42.308 0.00 0.00 36.50 3.85
417 428 8.534496 TGTTAGGATAGTTAAACTCCTTACACC 58.466 37.037 13.10 0.00 41.35 4.16
586 598 9.253832 AGATAGTTCATCTATGAGGGAATACAG 57.746 37.037 0.00 0.00 42.49 2.74
621 633 7.491696 GGTTGTATGTAGTCACTTGGTAGATTC 59.508 40.741 0.00 0.00 0.00 2.52
653 665 5.731406 GCATGTGAAGTGTGGCAGTATAATG 60.731 44.000 0.00 0.00 0.00 1.90
711 723 2.289532 GCAGCCTCTCTGGTGGAGT 61.290 63.158 0.00 0.00 43.06 3.85
772 784 6.667558 ATACTACTAGTAACTGAATGCCCC 57.332 41.667 3.76 0.00 33.89 5.80
783 795 0.171231 GAATGCCCCGAGCTTGAAAC 59.829 55.000 1.22 0.00 44.23 2.78
795 807 5.642063 CCGAGCTTGAAACCTAATTTACTCA 59.358 40.000 1.22 0.00 0.00 3.41
844 856 3.823873 TCCAAGCGTGTTTGGTTATTGAT 59.176 39.130 14.05 0.00 46.23 2.57
845 857 4.279671 TCCAAGCGTGTTTGGTTATTGATT 59.720 37.500 14.05 0.00 46.23 2.57
853 865 7.627513 GCGTGTTTGGTTATTGATTCCATTAGA 60.628 37.037 0.00 0.00 0.00 2.10
862 874 3.954200 TGATTCCATTAGAGTTGCAGCA 58.046 40.909 2.55 0.00 0.00 4.41
890 902 4.502016 TGCACTTCAACAGCAAAATGAAA 58.498 34.783 0.00 0.00 34.97 2.69
891 903 4.567558 TGCACTTCAACAGCAAAATGAAAG 59.432 37.500 0.00 0.00 34.97 2.62
899 911 4.067192 ACAGCAAAATGAAAGGGAAATGC 58.933 39.130 0.00 0.00 0.00 3.56
902 914 3.437741 GCAAAATGAAAGGGAAATGCTGG 59.562 43.478 0.00 0.00 0.00 4.85
913 925 1.479323 GAAATGCTGGTCATGTGCCAT 59.521 47.619 11.10 0.00 35.13 4.40
918 930 1.259609 CTGGTCATGTGCCATTGGTT 58.740 50.000 4.26 0.00 35.19 3.67
932 944 5.105392 TGCCATTGGTTTTGGAATGAGATAC 60.105 40.000 4.26 0.00 36.26 2.24
944 957 4.454678 GAATGAGATACCTGCACCATTGA 58.545 43.478 0.00 0.00 0.00 2.57
1006 1019 7.169813 GGAATCAAAGAACTGTTTCAATGAACC 59.830 37.037 0.00 0.00 34.30 3.62
1011 1024 4.823989 AGAACTGTTTCAATGAACCTCCTG 59.176 41.667 0.00 0.00 33.72 3.86
1034 1047 4.442753 GCTAGACCTTAAGCATCTCAAGCT 60.443 45.833 15.74 0.00 45.97 3.74
1078 1091 4.808558 TGTCATTTGCAAATGCCTTCTAC 58.191 39.130 36.52 29.09 44.15 2.59
1275 1288 2.749044 AGGGCATGCTTGACTGCG 60.749 61.111 18.92 0.00 39.30 5.18
1288 1301 2.844946 TGACTGCGAAATTCCTGAACA 58.155 42.857 0.00 0.00 0.00 3.18
1308 1321 1.375098 GGTCTCTGCTCATGCCAAGC 61.375 60.000 0.00 0.00 40.26 4.01
1407 1420 2.048023 CAATGCCCGCTGTCATGGT 61.048 57.895 0.00 0.00 0.00 3.55
1413 1426 1.442520 CCGCTGTCATGGTTTTGCG 60.443 57.895 0.00 0.00 42.52 4.85
1423 1436 0.250727 TGGTTTTGCGAGGCTAGCTT 60.251 50.000 20.26 6.94 35.28 3.74
1431 1444 1.394618 CGAGGCTAGCTTGGTACTCT 58.605 55.000 15.72 0.00 0.00 3.24
1452 1465 7.378966 ACTCTGAAGTTTCGAATCATACTGAA 58.621 34.615 8.83 0.00 28.74 3.02
1464 1477 8.358148 TCGAATCATACTGAACCCTATAAACTC 58.642 37.037 0.00 0.00 0.00 3.01
1498 1511 0.614979 TAGGAGGTGGACAGTGGAGC 60.615 60.000 0.00 0.00 0.00 4.70
1533 1546 0.316841 TGCAAGAATCCAAAACGGGC 59.683 50.000 0.00 0.00 34.36 6.13
1761 1774 5.207110 AGAGGATAGATGATGGTTCGTTG 57.793 43.478 0.00 0.00 0.00 4.10
1845 1858 1.446272 GAAGTGGGAGAAGCGGTCG 60.446 63.158 0.00 0.00 0.00 4.79
2013 2026 5.991606 CGGTATGATTGCCTATGAGAAGAAA 59.008 40.000 0.00 0.00 0.00 2.52
2038 2051 7.549147 AAACTTGGAGTTACTGACCTATACA 57.451 36.000 0.00 0.00 37.47 2.29
2052 2065 4.235372 ACCTATACAAGAGGCAGCCTTAT 58.765 43.478 17.46 11.88 37.63 1.73
2070 2083 7.446625 CAGCCTTATCTTATAAAGTCTGCCATT 59.553 37.037 0.00 0.00 0.00 3.16
2085 2098 1.956477 GCCATTGACTTTGAGGTGTGT 59.044 47.619 0.00 0.00 0.00 3.72
2161 2174 7.788026 TGTAGTTTTGTCTAGAACAGAAAGGA 58.212 34.615 0.00 0.00 39.58 3.36
2217 2230 1.933853 GATGTTGGGCTGTCGTCATAC 59.066 52.381 0.00 0.00 0.00 2.39
2253 2266 2.192979 GATGATGGCGGGCCTCAA 59.807 61.111 13.06 0.00 36.94 3.02
2341 2354 2.016604 GCCACTGACAGTTGGTTGACA 61.017 52.381 19.07 0.00 0.00 3.58
2343 2356 1.327460 CACTGACAGTTGGTTGACACG 59.673 52.381 5.04 0.00 0.00 4.49
2361 2374 3.928992 ACACGCATAACATCTGACTGAAG 59.071 43.478 0.00 0.00 0.00 3.02
2368 2381 4.761235 AACATCTGACTGAAGCACAATG 57.239 40.909 0.00 0.00 0.00 2.82
2370 2383 3.244665 ACATCTGACTGAAGCACAATGGA 60.245 43.478 0.00 0.00 0.00 3.41
2373 2386 1.872952 TGACTGAAGCACAATGGAACG 59.127 47.619 0.00 0.00 0.00 3.95
2380 2393 0.387239 GCACAATGGAACGCAGGAAC 60.387 55.000 0.00 0.00 0.00 3.62
2401 2415 6.127842 GGAACATAGTTTTTGGCCGAATCTTA 60.128 38.462 6.16 0.00 0.00 2.10
2410 2424 6.920569 TTTGGCCGAATCTTATCTAGAAAC 57.079 37.500 0.00 0.00 36.22 2.78
2411 2425 5.871396 TGGCCGAATCTTATCTAGAAACT 57.129 39.130 0.00 0.00 36.22 2.66
2466 2489 2.838360 AGCCACACTGACATGCCA 59.162 55.556 0.00 0.00 0.00 4.92
2472 2495 0.887836 ACACTGACATGCCAGCACTG 60.888 55.000 9.17 2.84 37.68 3.66
2499 2522 1.419762 TGAGTTTGGCCAAGAGCTGTA 59.580 47.619 19.48 0.00 43.05 2.74
2504 2527 2.691409 TGGCCAAGAGCTGTATGTAC 57.309 50.000 0.61 0.00 43.05 2.90
2527 2550 6.608610 ACTTTGTGAGTGTGTACAAAAGTTC 58.391 36.000 11.86 1.49 43.69 3.01
2538 2561 5.297029 GTGTACAAAAGTTCTTTCCTGAGCT 59.703 40.000 0.00 0.00 0.00 4.09
2563 2601 5.941948 TTTTTAGTTTGCAGAGCTAGACC 57.058 39.130 0.00 0.00 0.00 3.85
2573 2611 1.889829 AGAGCTAGACCTGTGTGACAC 59.110 52.381 9.14 9.14 34.56 3.67
2576 2624 2.700897 AGCTAGACCTGTGTGACACTTT 59.299 45.455 17.47 0.51 35.11 2.66
2577 2625 3.060602 GCTAGACCTGTGTGACACTTTC 58.939 50.000 17.47 10.01 35.11 2.62
2578 2626 3.243907 GCTAGACCTGTGTGACACTTTCT 60.244 47.826 17.47 16.09 35.11 2.52
2579 2627 3.914426 AGACCTGTGTGACACTTTCTT 57.086 42.857 17.47 0.00 35.11 2.52
2580 2628 4.222124 AGACCTGTGTGACACTTTCTTT 57.778 40.909 17.47 0.00 35.11 2.52
2581 2629 3.941483 AGACCTGTGTGACACTTTCTTTG 59.059 43.478 17.47 0.48 35.11 2.77
2582 2630 2.423538 ACCTGTGTGACACTTTCTTTGC 59.576 45.455 17.47 0.00 35.11 3.68
2583 2631 2.684881 CCTGTGTGACACTTTCTTTGCT 59.315 45.455 17.47 0.00 35.11 3.91
2584 2632 3.876914 CCTGTGTGACACTTTCTTTGCTA 59.123 43.478 17.47 0.00 35.11 3.49
2585 2633 4.516698 CCTGTGTGACACTTTCTTTGCTAT 59.483 41.667 17.47 0.00 35.11 2.97
2586 2634 5.334414 CCTGTGTGACACTTTCTTTGCTATC 60.334 44.000 17.47 0.00 35.11 2.08
2607 2655 9.311916 GCTATCTATATGGTTTATTGAGAGCAG 57.688 37.037 14.39 0.00 40.77 4.24
2611 2659 8.213679 TCTATATGGTTTATTGAGAGCAGCTTT 58.786 33.333 0.00 0.00 0.00 3.51
2612 2660 4.771590 TGGTTTATTGAGAGCAGCTTTG 57.228 40.909 0.00 0.00 0.00 2.77
2615 2663 4.321527 GGTTTATTGAGAGCAGCTTTGCTT 60.322 41.667 1.54 0.00 46.36 3.91
2616 2664 4.691860 TTATTGAGAGCAGCTTTGCTTC 57.308 40.909 1.54 3.29 46.36 3.86
2617 2665 1.971481 TTGAGAGCAGCTTTGCTTCA 58.029 45.000 1.54 5.56 46.36 3.02
2618 2666 1.233019 TGAGAGCAGCTTTGCTTCAC 58.767 50.000 1.54 0.00 46.36 3.18
2619 2667 1.233019 GAGAGCAGCTTTGCTTCACA 58.767 50.000 1.54 0.00 46.36 3.58
2620 2668 0.950116 AGAGCAGCTTTGCTTCACAC 59.050 50.000 1.54 0.00 46.36 3.82
2621 2669 0.950116 GAGCAGCTTTGCTTCACACT 59.050 50.000 1.54 0.00 46.36 3.55
2622 2670 0.950116 AGCAGCTTTGCTTCACACTC 59.050 50.000 0.00 0.00 43.52 3.51
2624 2672 1.336125 GCAGCTTTGCTTCACACTCTT 59.664 47.619 0.00 0.00 36.40 2.85
2628 2676 2.287248 GCTTTGCTTCACACTCTTGGAC 60.287 50.000 0.00 0.00 0.00 4.02
2629 2677 2.708216 TTGCTTCACACTCTTGGACA 57.292 45.000 0.00 0.00 0.00 4.02
2633 2681 4.713553 TGCTTCACACTCTTGGACAATTA 58.286 39.130 0.00 0.00 0.00 1.40
2637 2685 6.094603 GCTTCACACTCTTGGACAATTATGAT 59.905 38.462 0.00 0.00 0.00 2.45
2652 2702 0.679002 ATGATGCTGCCACTGTCACC 60.679 55.000 0.00 0.00 0.00 4.02
2676 2727 6.309494 CCTGAACATTTGTATGAAGTGCATTG 59.691 38.462 0.00 0.00 38.44 2.82
2686 2737 3.884169 TGAAGTGCATTGTTTCGCTTAC 58.116 40.909 0.00 0.00 33.68 2.34
2694 2755 3.508648 TTGTTTCGCTTACGCTGTTAC 57.491 42.857 0.00 0.00 39.84 2.50
2695 2756 2.746269 TGTTTCGCTTACGCTGTTACT 58.254 42.857 0.00 0.00 39.84 2.24
2696 2757 3.899734 TGTTTCGCTTACGCTGTTACTA 58.100 40.909 0.00 0.00 39.84 1.82
2697 2758 3.670055 TGTTTCGCTTACGCTGTTACTAC 59.330 43.478 0.00 0.00 39.84 2.73
2698 2759 3.557577 TTCGCTTACGCTGTTACTACA 57.442 42.857 0.00 0.00 39.84 2.74
2699 2760 3.770263 TCGCTTACGCTGTTACTACAT 57.230 42.857 0.00 0.00 39.84 2.29
2700 2761 3.688272 TCGCTTACGCTGTTACTACATC 58.312 45.455 0.00 0.00 39.84 3.06
2701 2762 2.462927 CGCTTACGCTGTTACTACATCG 59.537 50.000 0.00 0.00 46.31 3.84
2702 2763 2.787680 GCTTACGCTGTTACTACATCGG 59.212 50.000 6.50 0.00 45.46 4.18
2703 2764 3.488047 GCTTACGCTGTTACTACATCGGA 60.488 47.826 6.50 0.00 45.46 4.55
2705 2766 3.146618 ACGCTGTTACTACATCGGAAG 57.853 47.619 6.50 0.00 45.46 3.46
2722 2783 3.367806 CGGAAGACTCTTGATTCTGCAGA 60.368 47.826 13.74 13.74 0.00 4.26
2723 2784 4.183101 GGAAGACTCTTGATTCTGCAGAG 58.817 47.826 17.43 4.96 0.00 3.35
2733 2794 7.105588 TCTTGATTCTGCAGAGCTTTGTAATA 58.894 34.615 17.43 0.00 0.00 0.98
2737 2798 4.708177 TCTGCAGAGCTTTGTAATATCCC 58.292 43.478 13.74 0.00 0.00 3.85
2738 2799 3.466836 TGCAGAGCTTTGTAATATCCCG 58.533 45.455 6.08 0.00 0.00 5.14
2768 2829 7.357951 AGATTCTTCTTTCGATGTGTTCTTC 57.642 36.000 0.00 0.00 0.00 2.87
2771 2832 5.611374 TCTTCTTTCGATGTGTTCTTCCTT 58.389 37.500 0.00 0.00 0.00 3.36
2772 2833 5.466728 TCTTCTTTCGATGTGTTCTTCCTTG 59.533 40.000 0.00 0.00 0.00 3.61
2779 2840 5.355630 TCGATGTGTTCTTCCTTGACAAAAA 59.644 36.000 0.00 0.00 0.00 1.94
2796 2857 3.537471 AAAAACACGCGTGGTAAGC 57.463 47.368 39.21 0.00 34.19 3.09
2806 2867 1.071814 GTGGTAAGCGGGGTCACAA 59.928 57.895 0.00 0.00 0.00 3.33
2816 2877 2.033299 GCGGGGTCACAAACATCATATG 59.967 50.000 0.00 0.00 0.00 1.78
2817 2878 2.033299 CGGGGTCACAAACATCATATGC 59.967 50.000 0.00 0.00 0.00 3.14
2820 2881 3.067180 GGGTCACAAACATCATATGCCAG 59.933 47.826 0.00 0.00 0.00 4.85
2823 2884 3.129113 TCACAAACATCATATGCCAGCAC 59.871 43.478 0.00 0.00 0.00 4.40
2829 2890 0.107066 TCATATGCCAGCACCTGTGG 60.107 55.000 0.00 0.00 38.21 4.17
2831 2892 0.107017 ATATGCCAGCACCTGTGGAC 60.107 55.000 0.00 0.00 37.23 4.02
2833 2894 1.200760 ATGCCAGCACCTGTGGACTA 61.201 55.000 0.00 0.00 37.23 2.59
2836 2897 1.813513 CCAGCACCTGTGGACTAAAG 58.186 55.000 0.00 0.00 37.23 1.85
2837 2898 1.347707 CCAGCACCTGTGGACTAAAGA 59.652 52.381 0.00 0.00 37.23 2.52
2840 2901 2.706190 AGCACCTGTGGACTAAAGAAGT 59.294 45.455 0.00 0.00 42.80 3.01
2844 2905 5.163550 GCACCTGTGGACTAAAGAAGTTTTT 60.164 40.000 0.00 0.00 39.07 1.94
2845 2906 6.265577 CACCTGTGGACTAAAGAAGTTTTTG 58.734 40.000 0.00 0.00 39.07 2.44
2846 2907 6.094881 CACCTGTGGACTAAAGAAGTTTTTGA 59.905 38.462 0.00 0.00 39.07 2.69
2847 2908 6.833933 ACCTGTGGACTAAAGAAGTTTTTGAT 59.166 34.615 0.00 0.00 39.07 2.57
2848 2909 7.141363 CCTGTGGACTAAAGAAGTTTTTGATG 58.859 38.462 0.00 0.00 39.07 3.07
2849 2910 7.201821 CCTGTGGACTAAAGAAGTTTTTGATGT 60.202 37.037 0.00 0.00 39.07 3.06
2850 2911 7.479980 TGTGGACTAAAGAAGTTTTTGATGTG 58.520 34.615 0.00 0.00 39.07 3.21
2851 2912 7.122055 TGTGGACTAAAGAAGTTTTTGATGTGT 59.878 33.333 0.00 0.00 39.07 3.72
2860 2921 5.262588 AGTTTTTGATGTGTGGGAAGTTC 57.737 39.130 0.00 0.00 0.00 3.01
2861 2922 4.099419 AGTTTTTGATGTGTGGGAAGTTCC 59.901 41.667 13.99 13.99 35.23 3.62
2868 2929 0.110486 TGTGGGAAGTTCCAAGCTCC 59.890 55.000 23.33 5.50 38.64 4.70
2869 2930 0.402121 GTGGGAAGTTCCAAGCTCCT 59.598 55.000 23.33 0.00 38.64 3.69
2870 2931 0.401738 TGGGAAGTTCCAAGCTCCTG 59.598 55.000 23.33 0.00 38.64 3.86
2871 2932 0.962855 GGGAAGTTCCAAGCTCCTGC 60.963 60.000 23.33 0.00 38.64 4.85
2872 2933 1.301677 GGAAGTTCCAAGCTCCTGCG 61.302 60.000 17.44 0.00 39.44 5.18
2873 2934 0.320771 GAAGTTCCAAGCTCCTGCGA 60.321 55.000 0.00 0.00 45.42 5.10
2874 2935 0.326264 AAGTTCCAAGCTCCTGCGAT 59.674 50.000 0.00 0.00 45.42 4.58
2875 2936 0.326264 AGTTCCAAGCTCCTGCGATT 59.674 50.000 0.00 0.00 45.42 3.34
2876 2937 0.449388 GTTCCAAGCTCCTGCGATTG 59.551 55.000 0.00 0.00 45.42 2.67
2877 2938 0.324614 TTCCAAGCTCCTGCGATTGA 59.675 50.000 0.00 0.00 45.42 2.57
2878 2939 0.391661 TCCAAGCTCCTGCGATTGAC 60.392 55.000 0.00 0.00 45.42 3.18
2879 2940 0.674581 CCAAGCTCCTGCGATTGACA 60.675 55.000 0.00 0.00 45.42 3.58
2880 2941 1.159285 CAAGCTCCTGCGATTGACAA 58.841 50.000 0.00 0.00 45.42 3.18
2881 2942 1.129998 CAAGCTCCTGCGATTGACAAG 59.870 52.381 0.00 0.00 45.42 3.16
2882 2943 0.392193 AGCTCCTGCGATTGACAAGG 60.392 55.000 0.00 0.00 45.42 3.61
2883 2944 0.391661 GCTCCTGCGATTGACAAGGA 60.392 55.000 0.00 0.00 0.00 3.36
2884 2945 1.945819 GCTCCTGCGATTGACAAGGAA 60.946 52.381 0.00 0.00 0.00 3.36
2885 2946 1.734465 CTCCTGCGATTGACAAGGAAC 59.266 52.381 0.00 0.00 0.00 3.62
2886 2947 1.071542 TCCTGCGATTGACAAGGAACA 59.928 47.619 0.00 0.00 0.00 3.18
2887 2948 1.466167 CCTGCGATTGACAAGGAACAG 59.534 52.381 0.00 0.00 0.00 3.16
2888 2949 2.416747 CTGCGATTGACAAGGAACAGA 58.583 47.619 0.00 0.00 0.00 3.41
2889 2950 2.414481 CTGCGATTGACAAGGAACAGAG 59.586 50.000 0.00 0.00 0.00 3.35
2890 2951 1.734465 GCGATTGACAAGGAACAGAGG 59.266 52.381 0.00 0.00 0.00 3.69
2891 2952 2.350522 CGATTGACAAGGAACAGAGGG 58.649 52.381 0.00 0.00 0.00 4.30
2892 2953 2.716217 GATTGACAAGGAACAGAGGGG 58.284 52.381 0.00 0.00 0.00 4.79
2893 2954 0.771127 TTGACAAGGAACAGAGGGGG 59.229 55.000 0.00 0.00 0.00 5.40
2909 2970 1.338107 GGGGGAAAGGTTGTTTCTGG 58.662 55.000 0.00 0.00 0.00 3.86
2910 2971 1.338107 GGGGAAAGGTTGTTTCTGGG 58.662 55.000 0.00 0.00 0.00 4.45
2911 2972 1.133294 GGGGAAAGGTTGTTTCTGGGA 60.133 52.381 0.00 0.00 0.00 4.37
2912 2973 2.673258 GGGAAAGGTTGTTTCTGGGAA 58.327 47.619 0.00 0.00 0.00 3.97
2913 2974 2.364324 GGGAAAGGTTGTTTCTGGGAAC 59.636 50.000 0.00 0.00 0.00 3.62
2914 2975 3.028130 GGAAAGGTTGTTTCTGGGAACA 58.972 45.455 0.00 0.00 37.73 3.18
2915 2976 3.181479 GGAAAGGTTGTTTCTGGGAACAC 60.181 47.826 0.00 0.00 39.11 3.32
2916 2977 2.818751 AGGTTGTTTCTGGGAACACA 57.181 45.000 0.00 0.00 39.11 3.72
2917 2978 3.312736 AGGTTGTTTCTGGGAACACAT 57.687 42.857 0.00 0.00 39.11 3.21
2918 2979 3.222603 AGGTTGTTTCTGGGAACACATC 58.777 45.455 0.00 0.00 39.11 3.06
2919 2980 2.955660 GGTTGTTTCTGGGAACACATCA 59.044 45.455 0.00 0.00 39.11 3.07
2920 2981 3.004734 GGTTGTTTCTGGGAACACATCAG 59.995 47.826 0.00 0.00 39.11 2.90
2921 2982 3.576078 TGTTTCTGGGAACACATCAGT 57.424 42.857 0.00 0.00 34.77 3.41
2922 2983 3.897239 TGTTTCTGGGAACACATCAGTT 58.103 40.909 0.00 0.00 34.77 3.16
2923 2984 3.631686 TGTTTCTGGGAACACATCAGTTG 59.368 43.478 0.00 0.00 34.77 3.16
2924 2985 3.576078 TTCTGGGAACACATCAGTTGT 57.424 42.857 0.00 0.00 39.91 3.32
2925 2986 4.698201 TTCTGGGAACACATCAGTTGTA 57.302 40.909 0.00 0.00 36.57 2.41
2926 2987 4.002906 TCTGGGAACACATCAGTTGTAC 57.997 45.455 0.00 0.00 36.57 2.90
2927 2988 3.646162 TCTGGGAACACATCAGTTGTACT 59.354 43.478 0.00 0.00 36.57 2.73
2928 2989 3.738982 TGGGAACACATCAGTTGTACTG 58.261 45.455 0.40 0.40 41.08 2.74
2948 3009 9.639601 TGTACTGATATGTACAGAAAAACAGAG 57.360 33.333 17.44 2.77 45.16 3.35
2949 3010 7.602517 ACTGATATGTACAGAAAAACAGAGC 57.397 36.000 17.44 0.00 38.55 4.09
2950 3011 7.161404 ACTGATATGTACAGAAAAACAGAGCA 58.839 34.615 17.44 0.00 38.55 4.26
2951 3012 7.601073 TGATATGTACAGAAAAACAGAGCAG 57.399 36.000 0.33 0.00 29.24 4.24
2952 3013 7.161404 TGATATGTACAGAAAAACAGAGCAGT 58.839 34.615 0.33 0.00 29.24 4.40
2953 3014 7.661437 TGATATGTACAGAAAAACAGAGCAGTT 59.339 33.333 0.33 0.00 29.24 3.16
2954 3015 6.699575 ATGTACAGAAAAACAGAGCAGTTT 57.300 33.333 0.33 0.00 43.13 2.66
2964 3025 5.888412 AACAGAGCAGTTTTTATTTTGCG 57.112 34.783 0.00 0.00 41.27 4.85
2965 3026 4.932146 ACAGAGCAGTTTTTATTTTGCGT 58.068 34.783 0.00 0.00 41.27 5.24
2966 3027 4.739716 ACAGAGCAGTTTTTATTTTGCGTG 59.260 37.500 0.00 0.00 41.27 5.34
2967 3028 4.739716 CAGAGCAGTTTTTATTTTGCGTGT 59.260 37.500 0.00 0.00 41.27 4.49
2968 3029 4.739716 AGAGCAGTTTTTATTTTGCGTGTG 59.260 37.500 0.00 0.00 41.27 3.82
2969 3030 4.677584 AGCAGTTTTTATTTTGCGTGTGA 58.322 34.783 0.00 0.00 41.27 3.58
2970 3031 5.288804 AGCAGTTTTTATTTTGCGTGTGAT 58.711 33.333 0.00 0.00 41.27 3.06
2971 3032 6.442952 AGCAGTTTTTATTTTGCGTGTGATA 58.557 32.000 0.00 0.00 41.27 2.15
2972 3033 6.920758 AGCAGTTTTTATTTTGCGTGTGATAA 59.079 30.769 0.00 0.00 41.27 1.75
2973 3034 7.436673 AGCAGTTTTTATTTTGCGTGTGATAAA 59.563 29.630 0.00 0.00 41.27 1.40
2974 3035 8.058915 GCAGTTTTTATTTTGCGTGTGATAAAA 58.941 29.630 0.00 0.00 34.14 1.52
2975 3036 9.907576 CAGTTTTTATTTTGCGTGTGATAAAAA 57.092 25.926 12.92 12.92 39.60 1.94
2978 3039 9.907576 TTTTTATTTTGCGTGTGATAAAAACAG 57.092 25.926 12.92 0.00 38.23 3.16
2979 3040 8.858003 TTTATTTTGCGTGTGATAAAAACAGA 57.142 26.923 0.00 0.00 0.00 3.41
2980 3041 6.991485 ATTTTGCGTGTGATAAAAACAGAG 57.009 33.333 0.00 0.00 0.00 3.35
2981 3042 3.536158 TGCGTGTGATAAAAACAGAGC 57.464 42.857 0.00 0.00 34.68 4.09
2982 3043 2.875317 TGCGTGTGATAAAAACAGAGCA 59.125 40.909 0.00 0.00 38.94 4.26
2983 3044 3.058983 TGCGTGTGATAAAAACAGAGCAG 60.059 43.478 0.00 0.00 37.42 4.24
2984 3045 3.058914 GCGTGTGATAAAAACAGAGCAGT 60.059 43.478 0.00 0.00 34.42 4.40
2985 3046 4.554723 GCGTGTGATAAAAACAGAGCAGTT 60.555 41.667 0.00 0.00 34.42 3.16
2986 3047 4.905866 CGTGTGATAAAAACAGAGCAGTTG 59.094 41.667 0.00 0.00 0.00 3.16
2987 3048 5.504010 CGTGTGATAAAAACAGAGCAGTTGT 60.504 40.000 0.00 0.00 0.00 3.32
2988 3049 6.265577 GTGTGATAAAAACAGAGCAGTTGTT 58.734 36.000 0.00 0.00 40.30 2.83
2990 3051 6.972328 TGTGATAAAAACAGAGCAGTTGTTTC 59.028 34.615 11.85 3.37 45.28 2.78
2991 3052 6.972328 GTGATAAAAACAGAGCAGTTGTTTCA 59.028 34.615 11.85 5.36 45.28 2.69
2992 3053 7.487829 GTGATAAAAACAGAGCAGTTGTTTCAA 59.512 33.333 11.85 5.89 45.28 2.69
2993 3054 8.196771 TGATAAAAACAGAGCAGTTGTTTCAAT 58.803 29.630 11.85 9.21 45.28 2.57
2994 3055 6.892310 AAAAACAGAGCAGTTGTTTCAATC 57.108 33.333 11.85 0.00 45.28 2.67
2995 3056 5.581126 AAACAGAGCAGTTGTTTCAATCA 57.419 34.783 7.23 0.00 43.26 2.57
2996 3057 5.581126 AACAGAGCAGTTGTTTCAATCAA 57.419 34.783 0.00 0.00 35.32 2.57
2997 3058 5.179045 ACAGAGCAGTTGTTTCAATCAAG 57.821 39.130 0.00 0.00 0.00 3.02
2998 3059 4.883585 ACAGAGCAGTTGTTTCAATCAAGA 59.116 37.500 0.00 0.00 0.00 3.02
2999 3060 5.210715 CAGAGCAGTTGTTTCAATCAAGAC 58.789 41.667 0.00 0.00 0.00 3.01
3000 3061 4.883585 AGAGCAGTTGTTTCAATCAAGACA 59.116 37.500 0.00 0.00 0.00 3.41
3001 3062 5.357878 AGAGCAGTTGTTTCAATCAAGACAA 59.642 36.000 0.00 0.00 0.00 3.18
3006 3067 6.976350 GTTGTTTCAATCAAGACAACTAGC 57.024 37.500 10.08 0.00 45.05 3.42
3007 3068 6.494842 GTTGTTTCAATCAAGACAACTAGCA 58.505 36.000 10.08 0.00 45.05 3.49
3008 3069 6.304356 TGTTTCAATCAAGACAACTAGCAG 57.696 37.500 0.00 0.00 0.00 4.24
3009 3070 5.149977 GTTTCAATCAAGACAACTAGCAGC 58.850 41.667 0.00 0.00 0.00 5.25
3010 3071 4.006780 TCAATCAAGACAACTAGCAGCA 57.993 40.909 0.00 0.00 0.00 4.41
3011 3072 4.582869 TCAATCAAGACAACTAGCAGCAT 58.417 39.130 0.00 0.00 0.00 3.79
3012 3073 4.633126 TCAATCAAGACAACTAGCAGCATC 59.367 41.667 0.00 0.00 0.00 3.91
3013 3074 3.683365 TCAAGACAACTAGCAGCATCA 57.317 42.857 0.00 0.00 0.00 3.07
3014 3075 4.212143 TCAAGACAACTAGCAGCATCAT 57.788 40.909 0.00 0.00 0.00 2.45
3015 3076 5.343307 TCAAGACAACTAGCAGCATCATA 57.657 39.130 0.00 0.00 0.00 2.15
3016 3077 5.733676 TCAAGACAACTAGCAGCATCATAA 58.266 37.500 0.00 0.00 0.00 1.90
3017 3078 6.351711 TCAAGACAACTAGCAGCATCATAAT 58.648 36.000 0.00 0.00 0.00 1.28
3018 3079 6.825213 TCAAGACAACTAGCAGCATCATAATT 59.175 34.615 0.00 0.00 0.00 1.40
3019 3080 7.986889 TCAAGACAACTAGCAGCATCATAATTA 59.013 33.333 0.00 0.00 0.00 1.40
3020 3081 8.781196 CAAGACAACTAGCAGCATCATAATTAT 58.219 33.333 0.00 0.00 0.00 1.28
3021 3082 8.545229 AGACAACTAGCAGCATCATAATTATC 57.455 34.615 0.00 0.00 0.00 1.75
3022 3083 8.373981 AGACAACTAGCAGCATCATAATTATCT 58.626 33.333 0.00 0.00 0.00 1.98
3023 3084 8.915057 ACAACTAGCAGCATCATAATTATCTT 57.085 30.769 0.00 0.00 0.00 2.40
3048 3109 7.883229 ATTATTAAAGAAAAACACTTGGCGG 57.117 32.000 0.00 0.00 0.00 6.13
3049 3110 1.934589 AAAGAAAAACACTTGGCGGC 58.065 45.000 0.00 0.00 0.00 6.53
3050 3111 0.820871 AAGAAAAACACTTGGCGGCA 59.179 45.000 7.97 7.97 0.00 5.69
3051 3112 0.820871 AGAAAAACACTTGGCGGCAA 59.179 45.000 24.02 24.02 0.00 4.52
3052 3113 1.205893 AGAAAAACACTTGGCGGCAAA 59.794 42.857 25.45 9.56 0.00 3.68
3053 3114 2.158971 AGAAAAACACTTGGCGGCAAAT 60.159 40.909 25.45 13.68 0.00 2.32
3054 3115 2.323968 AAAACACTTGGCGGCAAATT 57.676 40.000 25.45 16.31 0.00 1.82
3055 3116 1.864565 AAACACTTGGCGGCAAATTC 58.135 45.000 25.45 0.00 0.00 2.17
3056 3117 1.039856 AACACTTGGCGGCAAATTCT 58.960 45.000 25.45 7.95 0.00 2.40
3057 3118 0.598065 ACACTTGGCGGCAAATTCTC 59.402 50.000 25.45 0.00 0.00 2.87
3058 3119 0.883833 CACTTGGCGGCAAATTCTCT 59.116 50.000 25.45 1.22 0.00 3.10
3059 3120 0.883833 ACTTGGCGGCAAATTCTCTG 59.116 50.000 25.45 13.95 0.00 3.35
3060 3121 0.457337 CTTGGCGGCAAATTCTCTGC 60.457 55.000 25.45 2.95 39.16 4.26
3066 3127 2.555123 GCAAATTCTCTGCCCGACA 58.445 52.632 0.00 0.00 33.51 4.35
3067 3128 0.881118 GCAAATTCTCTGCCCGACAA 59.119 50.000 0.00 0.00 33.51 3.18
3068 3129 1.135575 GCAAATTCTCTGCCCGACAAG 60.136 52.381 0.00 0.00 33.51 3.16
3069 3130 2.426522 CAAATTCTCTGCCCGACAAGA 58.573 47.619 0.00 0.00 0.00 3.02
3070 3131 2.100605 AATTCTCTGCCCGACAAGAC 57.899 50.000 0.00 0.00 0.00 3.01
3071 3132 0.976641 ATTCTCTGCCCGACAAGACA 59.023 50.000 0.00 0.00 0.00 3.41
3072 3133 0.756294 TTCTCTGCCCGACAAGACAA 59.244 50.000 0.00 0.00 0.00 3.18
3073 3134 0.976641 TCTCTGCCCGACAAGACAAT 59.023 50.000 0.00 0.00 0.00 2.71
3074 3135 1.347707 TCTCTGCCCGACAAGACAATT 59.652 47.619 0.00 0.00 0.00 2.32
3075 3136 2.565391 TCTCTGCCCGACAAGACAATTA 59.435 45.455 0.00 0.00 0.00 1.40
3076 3137 2.932614 CTCTGCCCGACAAGACAATTAG 59.067 50.000 0.00 0.00 0.00 1.73
3077 3138 1.398390 CTGCCCGACAAGACAATTAGC 59.602 52.381 0.00 0.00 0.00 3.09
3078 3139 1.271108 TGCCCGACAAGACAATTAGCA 60.271 47.619 0.00 0.00 0.00 3.49
3079 3140 1.810151 GCCCGACAAGACAATTAGCAA 59.190 47.619 0.00 0.00 0.00 3.91
3080 3141 2.414161 GCCCGACAAGACAATTAGCAAC 60.414 50.000 0.00 0.00 0.00 4.17
3081 3142 2.811431 CCCGACAAGACAATTAGCAACA 59.189 45.455 0.00 0.00 0.00 3.33
3082 3143 3.440173 CCCGACAAGACAATTAGCAACAT 59.560 43.478 0.00 0.00 0.00 2.71
3083 3144 4.634004 CCCGACAAGACAATTAGCAACATA 59.366 41.667 0.00 0.00 0.00 2.29
3084 3145 5.123186 CCCGACAAGACAATTAGCAACATAA 59.877 40.000 0.00 0.00 0.00 1.90
3085 3146 6.183360 CCCGACAAGACAATTAGCAACATAAT 60.183 38.462 0.00 0.00 0.00 1.28
3086 3147 6.907212 CCGACAAGACAATTAGCAACATAATC 59.093 38.462 0.00 0.00 0.00 1.75
3087 3148 6.907212 CGACAAGACAATTAGCAACATAATCC 59.093 38.462 0.00 0.00 0.00 3.01
3088 3149 7.201644 CGACAAGACAATTAGCAACATAATCCT 60.202 37.037 0.00 0.00 0.00 3.24
3089 3150 8.353423 ACAAGACAATTAGCAACATAATCCTT 57.647 30.769 0.00 0.00 0.00 3.36
3090 3151 8.806146 ACAAGACAATTAGCAACATAATCCTTT 58.194 29.630 0.00 0.00 0.00 3.11
3091 3152 9.643693 CAAGACAATTAGCAACATAATCCTTTT 57.356 29.630 0.00 0.00 0.00 2.27
3132 3193 8.585471 TGAGAAAAAGAAATCAGCATAATCCT 57.415 30.769 0.00 0.00 0.00 3.24
3133 3194 9.028284 TGAGAAAAAGAAATCAGCATAATCCTT 57.972 29.630 0.00 0.00 0.00 3.36
3134 3195 9.866798 GAGAAAAAGAAATCAGCATAATCCTTT 57.133 29.630 0.00 0.00 0.00 3.11
3142 3203 9.189723 GAAATCAGCATAATCCTTTTAATGAGC 57.810 33.333 0.00 0.00 0.00 4.26
3143 3204 7.828508 ATCAGCATAATCCTTTTAATGAGCA 57.171 32.000 0.00 0.00 0.00 4.26
3144 3205 7.828508 TCAGCATAATCCTTTTAATGAGCAT 57.171 32.000 0.00 0.00 0.00 3.79
3145 3206 7.654568 TCAGCATAATCCTTTTAATGAGCATG 58.345 34.615 0.00 0.00 0.00 4.06
3146 3207 6.866770 CAGCATAATCCTTTTAATGAGCATGG 59.133 38.462 0.00 0.00 0.00 3.66
3147 3208 5.636543 GCATAATCCTTTTAATGAGCATGGC 59.363 40.000 0.00 0.00 0.00 4.40
3148 3209 6.739286 GCATAATCCTTTTAATGAGCATGGCA 60.739 38.462 0.00 0.00 0.00 4.92
3149 3210 5.881923 AATCCTTTTAATGAGCATGGCAT 57.118 34.783 0.00 0.00 0.00 4.40
3150 3211 4.659111 TCCTTTTAATGAGCATGGCATG 57.341 40.909 22.99 22.99 0.00 4.06
3151 3212 4.025360 TCCTTTTAATGAGCATGGCATGT 58.975 39.130 26.94 14.72 0.00 3.21
3152 3213 4.467082 TCCTTTTAATGAGCATGGCATGTT 59.533 37.500 26.94 22.43 0.00 2.71
3153 3214 5.046448 TCCTTTTAATGAGCATGGCATGTTT 60.046 36.000 26.94 16.49 0.00 2.83
3154 3215 6.154192 TCCTTTTAATGAGCATGGCATGTTTA 59.846 34.615 26.94 19.17 0.00 2.01
3155 3216 6.256321 CCTTTTAATGAGCATGGCATGTTTAC 59.744 38.462 26.94 16.06 0.00 2.01
3156 3217 5.911378 TTAATGAGCATGGCATGTTTACA 57.089 34.783 26.94 20.27 0.00 2.41
3157 3218 4.804868 AATGAGCATGGCATGTTTACAA 57.195 36.364 26.94 10.19 0.00 2.41
3158 3219 3.853831 TGAGCATGGCATGTTTACAAG 57.146 42.857 26.94 1.03 0.00 3.16
3159 3220 2.492881 TGAGCATGGCATGTTTACAAGG 59.507 45.455 26.94 0.28 0.00 3.61
3160 3221 1.826720 AGCATGGCATGTTTACAAGGG 59.173 47.619 26.94 0.00 0.00 3.95
3161 3222 1.550072 GCATGGCATGTTTACAAGGGT 59.450 47.619 26.94 0.00 0.00 4.34
3162 3223 2.417243 GCATGGCATGTTTACAAGGGTC 60.417 50.000 26.94 3.65 0.00 4.46
3163 3224 2.666272 TGGCATGTTTACAAGGGTCA 57.334 45.000 0.00 0.00 0.00 4.02
3164 3225 2.513753 TGGCATGTTTACAAGGGTCAG 58.486 47.619 0.00 0.00 0.00 3.51
3165 3226 2.107378 TGGCATGTTTACAAGGGTCAGA 59.893 45.455 0.00 0.00 0.00 3.27
3166 3227 3.245229 TGGCATGTTTACAAGGGTCAGAT 60.245 43.478 0.00 0.00 0.00 2.90
3167 3228 3.129287 GGCATGTTTACAAGGGTCAGATG 59.871 47.826 0.00 0.00 0.00 2.90
3168 3229 3.758554 GCATGTTTACAAGGGTCAGATGT 59.241 43.478 0.00 0.00 0.00 3.06
3169 3230 4.379813 GCATGTTTACAAGGGTCAGATGTG 60.380 45.833 0.00 0.00 0.00 3.21
3170 3231 4.431416 TGTTTACAAGGGTCAGATGTGT 57.569 40.909 0.00 0.00 0.00 3.72
3171 3232 4.385825 TGTTTACAAGGGTCAGATGTGTC 58.614 43.478 0.00 0.00 0.00 3.67
3172 3233 4.102524 TGTTTACAAGGGTCAGATGTGTCT 59.897 41.667 0.00 0.00 34.14 3.41
3187 3248 3.532892 GTGTCTGCACATCTGAAGTTG 57.467 47.619 0.00 0.00 44.64 3.16
3188 3249 3.133691 GTGTCTGCACATCTGAAGTTGA 58.866 45.455 0.00 0.00 44.64 3.18
3189 3250 3.750130 GTGTCTGCACATCTGAAGTTGAT 59.250 43.478 0.00 0.00 44.64 2.57
3190 3251 4.214971 GTGTCTGCACATCTGAAGTTGATT 59.785 41.667 0.00 0.00 44.64 2.57
3191 3252 4.823442 TGTCTGCACATCTGAAGTTGATTT 59.177 37.500 0.00 0.00 0.00 2.17
3192 3253 5.300034 TGTCTGCACATCTGAAGTTGATTTT 59.700 36.000 0.00 0.00 0.00 1.82
3193 3254 6.486320 TGTCTGCACATCTGAAGTTGATTTTA 59.514 34.615 0.00 0.00 0.00 1.52
3194 3255 7.175467 TGTCTGCACATCTGAAGTTGATTTTAT 59.825 33.333 0.00 0.00 0.00 1.40
3195 3256 7.484007 GTCTGCACATCTGAAGTTGATTTTATG 59.516 37.037 0.00 0.00 0.00 1.90
3196 3257 7.391275 TCTGCACATCTGAAGTTGATTTTATGA 59.609 33.333 0.00 0.00 0.00 2.15
3197 3258 7.532571 TGCACATCTGAAGTTGATTTTATGAG 58.467 34.615 0.00 0.00 0.00 2.90
3198 3259 6.471519 GCACATCTGAAGTTGATTTTATGAGC 59.528 38.462 0.00 0.00 0.00 4.26
3199 3260 6.971184 CACATCTGAAGTTGATTTTATGAGCC 59.029 38.462 0.00 0.00 0.00 4.70
3200 3261 6.096001 ACATCTGAAGTTGATTTTATGAGCCC 59.904 38.462 0.00 0.00 0.00 5.19
3201 3262 5.569355 TCTGAAGTTGATTTTATGAGCCCA 58.431 37.500 0.00 0.00 0.00 5.36
3202 3263 5.415701 TCTGAAGTTGATTTTATGAGCCCAC 59.584 40.000 0.00 0.00 0.00 4.61
3203 3264 5.076182 TGAAGTTGATTTTATGAGCCCACA 58.924 37.500 0.00 0.00 0.00 4.17
3204 3265 5.716228 TGAAGTTGATTTTATGAGCCCACAT 59.284 36.000 0.00 0.00 0.00 3.21
3205 3266 5.587388 AGTTGATTTTATGAGCCCACATG 57.413 39.130 0.00 0.00 0.00 3.21
3206 3267 5.263599 AGTTGATTTTATGAGCCCACATGA 58.736 37.500 0.00 0.00 0.00 3.07
3207 3268 5.716228 AGTTGATTTTATGAGCCCACATGAA 59.284 36.000 0.00 0.00 0.00 2.57
3208 3269 5.581126 TGATTTTATGAGCCCACATGAAC 57.419 39.130 0.00 0.00 0.00 3.18
3209 3270 4.096231 TGATTTTATGAGCCCACATGAACG 59.904 41.667 0.00 0.00 0.00 3.95
3210 3271 3.342377 TTTATGAGCCCACATGAACGA 57.658 42.857 0.00 0.00 0.00 3.85
3211 3272 3.342377 TTATGAGCCCACATGAACGAA 57.658 42.857 0.00 0.00 0.00 3.85
3212 3273 2.198827 ATGAGCCCACATGAACGAAA 57.801 45.000 0.00 0.00 0.00 3.46
3213 3274 1.234821 TGAGCCCACATGAACGAAAC 58.765 50.000 0.00 0.00 0.00 2.78
3214 3275 1.234821 GAGCCCACATGAACGAAACA 58.765 50.000 0.00 0.00 0.00 2.83
3215 3276 1.197721 GAGCCCACATGAACGAAACAG 59.802 52.381 0.00 0.00 0.00 3.16
3216 3277 1.202758 AGCCCACATGAACGAAACAGA 60.203 47.619 0.00 0.00 0.00 3.41
3217 3278 1.197721 GCCCACATGAACGAAACAGAG 59.802 52.381 0.00 0.00 0.00 3.35
3218 3279 1.197721 CCCACATGAACGAAACAGAGC 59.802 52.381 0.00 0.00 0.00 4.09
3219 3280 1.197721 CCACATGAACGAAACAGAGCC 59.802 52.381 0.00 0.00 0.00 4.70
3220 3281 2.146342 CACATGAACGAAACAGAGCCT 58.854 47.619 0.00 0.00 0.00 4.58
3221 3282 2.158449 CACATGAACGAAACAGAGCCTC 59.842 50.000 0.00 0.00 0.00 4.70
3222 3283 2.037772 ACATGAACGAAACAGAGCCTCT 59.962 45.455 0.00 0.00 0.00 3.69
3223 3284 2.910688 TGAACGAAACAGAGCCTCTT 57.089 45.000 0.00 0.00 0.00 2.85
3224 3285 3.194005 TGAACGAAACAGAGCCTCTTT 57.806 42.857 0.00 0.00 0.00 2.52
3225 3286 2.872245 TGAACGAAACAGAGCCTCTTTG 59.128 45.455 0.00 0.00 0.00 2.77
3226 3287 1.884235 ACGAAACAGAGCCTCTTTGG 58.116 50.000 0.00 0.00 39.35 3.28
3243 3304 8.917415 CCTCTTTGGCTAAAATTGTATCTTTC 57.083 34.615 0.00 0.00 0.00 2.62
3244 3305 8.743714 CCTCTTTGGCTAAAATTGTATCTTTCT 58.256 33.333 0.00 0.00 0.00 2.52
3256 3317 9.674068 AAATTGTATCTTTCTTTCTACTCCCTC 57.326 33.333 0.00 0.00 0.00 4.30
3257 3318 6.793505 TGTATCTTTCTTTCTACTCCCTCC 57.206 41.667 0.00 0.00 0.00 4.30
3258 3319 5.360144 TGTATCTTTCTTTCTACTCCCTCCG 59.640 44.000 0.00 0.00 0.00 4.63
3259 3320 3.775910 TCTTTCTTTCTACTCCCTCCGT 58.224 45.455 0.00 0.00 0.00 4.69
3260 3321 4.158015 TCTTTCTTTCTACTCCCTCCGTT 58.842 43.478 0.00 0.00 0.00 4.44
3261 3322 4.220163 TCTTTCTTTCTACTCCCTCCGTTC 59.780 45.833 0.00 0.00 0.00 3.95
3262 3323 2.089980 TCTTTCTACTCCCTCCGTTCG 58.910 52.381 0.00 0.00 0.00 3.95
3263 3324 1.134560 CTTTCTACTCCCTCCGTTCGG 59.865 57.143 4.74 4.74 0.00 4.30
3264 3325 0.329261 TTCTACTCCCTCCGTTCGGA 59.671 55.000 13.34 13.34 0.00 4.55
3265 3326 0.329261 TCTACTCCCTCCGTTCGGAA 59.671 55.000 14.79 0.04 33.41 4.30
3266 3327 1.064166 TCTACTCCCTCCGTTCGGAAT 60.064 52.381 14.79 2.09 33.41 3.01
3267 3328 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
3268 3329 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
3269 3330 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
3270 3331 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
3271 3332 1.753073 TCCCTCCGTTCGGAATTACTC 59.247 52.381 14.79 0.00 33.41 2.59
3272 3333 1.535437 CCCTCCGTTCGGAATTACTCG 60.535 57.143 14.79 1.97 33.41 4.18
3273 3334 1.133790 CCTCCGTTCGGAATTACTCGT 59.866 52.381 14.79 0.00 33.41 4.18
3274 3335 2.448219 CTCCGTTCGGAATTACTCGTC 58.552 52.381 14.79 0.00 33.41 4.20
3275 3336 1.133025 TCCGTTCGGAATTACTCGTCC 59.867 52.381 11.66 0.00 0.00 4.79
3276 3337 1.135315 CCGTTCGGAATTACTCGTCCA 60.135 52.381 5.19 0.00 33.10 4.02
3277 3338 2.598589 CGTTCGGAATTACTCGTCCAA 58.401 47.619 0.00 0.00 33.10 3.53
3278 3339 2.597305 CGTTCGGAATTACTCGTCCAAG 59.403 50.000 0.00 0.00 33.10 3.61
3279 3340 3.671433 CGTTCGGAATTACTCGTCCAAGA 60.671 47.826 0.00 0.00 33.10 3.02
3280 3341 4.240096 GTTCGGAATTACTCGTCCAAGAA 58.760 43.478 0.00 0.00 33.10 2.52
3281 3342 4.524316 TCGGAATTACTCGTCCAAGAAA 57.476 40.909 0.00 0.00 33.10 2.52
3282 3343 5.080969 TCGGAATTACTCGTCCAAGAAAT 57.919 39.130 0.00 0.00 33.10 2.17
3283 3344 4.868171 TCGGAATTACTCGTCCAAGAAATG 59.132 41.667 0.00 0.00 33.10 2.32
3284 3345 4.868171 CGGAATTACTCGTCCAAGAAATGA 59.132 41.667 0.00 0.00 33.10 2.57
3285 3346 5.350365 CGGAATTACTCGTCCAAGAAATGAA 59.650 40.000 0.00 0.00 33.10 2.57
3286 3347 6.037172 CGGAATTACTCGTCCAAGAAATGAAT 59.963 38.462 0.00 0.00 33.10 2.57
3287 3348 7.189512 GGAATTACTCGTCCAAGAAATGAATG 58.810 38.462 0.00 0.00 33.79 2.67
3288 3349 7.148239 GGAATTACTCGTCCAAGAAATGAATGT 60.148 37.037 0.00 0.00 33.79 2.71
3289 3350 8.786826 AATTACTCGTCCAAGAAATGAATGTA 57.213 30.769 0.00 0.00 0.00 2.29
3290 3351 8.964476 ATTACTCGTCCAAGAAATGAATGTAT 57.036 30.769 0.00 0.00 0.00 2.29
3291 3352 6.910536 ACTCGTCCAAGAAATGAATGTATC 57.089 37.500 0.00 0.00 0.00 2.24
3292 3353 6.644347 ACTCGTCCAAGAAATGAATGTATCT 58.356 36.000 0.00 0.00 0.00 1.98
3293 3354 7.782049 ACTCGTCCAAGAAATGAATGTATCTA 58.218 34.615 0.00 0.00 0.00 1.98
3294 3355 7.923344 ACTCGTCCAAGAAATGAATGTATCTAG 59.077 37.037 0.00 0.00 0.00 2.43
3295 3356 8.007405 TCGTCCAAGAAATGAATGTATCTAGA 57.993 34.615 0.00 0.00 0.00 2.43
3296 3357 8.642432 TCGTCCAAGAAATGAATGTATCTAGAT 58.358 33.333 10.73 10.73 0.00 1.98
3297 3358 8.920665 CGTCCAAGAAATGAATGTATCTAGATC 58.079 37.037 8.95 2.00 0.00 2.75
3298 3359 9.995003 GTCCAAGAAATGAATGTATCTAGATCT 57.005 33.333 8.95 0.00 0.00 2.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 1.373748 GGTAACGCTCCAACTCGCA 60.374 57.895 0.00 0.00 0.00 5.10
7 8 2.429610 TCATAGGGTAACGCTCCAACTC 59.570 50.000 0.00 0.00 37.60 3.01
17 18 5.918608 TGAGCAGATCTTTCATAGGGTAAC 58.081 41.667 0.00 0.00 0.00 2.50
20 21 4.100808 GTCTGAGCAGATCTTTCATAGGGT 59.899 45.833 3.19 0.00 39.97 4.34
43 44 1.068741 GCCGGTGTCCTTCATACCTAG 59.931 57.143 1.90 0.00 32.28 3.02
52 53 2.925170 AGCTGAGCCGGTGTCCTT 60.925 61.111 1.90 0.00 0.00 3.36
59 60 4.694233 ACACAGCAGCTGAGCCGG 62.694 66.667 29.70 13.96 35.18 6.13
108 111 6.873076 GTCTATGGATTTAGATCTGGCAGAAG 59.127 42.308 22.84 9.57 31.19 2.85
127 130 6.253746 GCAAGCAATCACTACTTTGTCTATG 58.746 40.000 0.00 0.00 0.00 2.23
132 135 2.558359 GGGCAAGCAATCACTACTTTGT 59.442 45.455 0.00 0.00 0.00 2.83
135 138 2.716217 GAGGGCAAGCAATCACTACTT 58.284 47.619 0.00 0.00 0.00 2.24
137 140 1.009829 CGAGGGCAAGCAATCACTAC 58.990 55.000 0.00 0.00 0.00 2.73
169 172 8.789825 TTAACAAATGGCTTTGCAAATCATAT 57.210 26.923 20.98 10.73 44.63 1.78
174 177 6.016108 AGCAATTAACAAATGGCTTTGCAAAT 60.016 30.769 13.23 0.00 44.63 2.32
214 217 4.422073 TCTTGACTTTTGCAGGAGAGAA 57.578 40.909 5.52 0.00 0.00 2.87
215 218 4.630644 ATCTTGACTTTTGCAGGAGAGA 57.369 40.909 5.52 0.00 0.00 3.10
216 219 5.702349 AAATCTTGACTTTTGCAGGAGAG 57.298 39.130 5.52 0.00 0.00 3.20
217 220 7.765695 AATAAATCTTGACTTTTGCAGGAGA 57.234 32.000 5.52 0.00 0.00 3.71
238 241 6.246163 TCACTGGTCACTACTCAGAGAAATA 58.754 40.000 3.79 0.00 31.86 1.40
297 301 2.108168 TGGTAGCCTGACATACTGGTC 58.892 52.381 0.00 0.00 39.38 4.02
315 326 5.533528 TCATTTCATATGGAAGTCAGCATGG 59.466 40.000 2.23 0.00 36.72 3.66
359 370 3.005684 CCAGCAGCTTTTGTACATCCAAA 59.994 43.478 0.00 0.00 32.70 3.28
410 421 8.965172 GTTATACTCATACATGTTCGGTGTAAG 58.035 37.037 2.30 0.00 35.84 2.34
417 428 6.701841 AGCAAGGTTATACTCATACATGTTCG 59.298 38.462 2.30 0.00 0.00 3.95
563 575 8.004801 TGACTGTATTCCCTCATAGATGAACTA 58.995 37.037 0.00 0.00 36.18 2.24
621 633 3.985279 CCACACTTCACATGCAATTTCAG 59.015 43.478 0.00 0.00 0.00 3.02
653 665 4.965119 AACAAAGACACAACTCAAGGTC 57.035 40.909 0.00 0.00 0.00 3.85
772 784 6.721571 TGAGTAAATTAGGTTTCAAGCTCG 57.278 37.500 0.00 0.00 37.92 5.03
783 795 7.346471 TCTTCCTGGGAAATGAGTAAATTAGG 58.654 38.462 3.55 0.00 33.34 2.69
844 856 3.076621 CTGTGCTGCAACTCTAATGGAA 58.923 45.455 2.77 0.00 0.00 3.53
845 857 2.038952 ACTGTGCTGCAACTCTAATGGA 59.961 45.455 2.77 0.00 0.00 3.41
862 874 1.818060 TGCTGTTGAAGTGCAAACTGT 59.182 42.857 0.00 0.00 38.44 3.55
870 882 4.508861 CCCTTTCATTTTGCTGTTGAAGTG 59.491 41.667 0.00 0.00 31.54 3.16
877 889 4.067192 GCATTTCCCTTTCATTTTGCTGT 58.933 39.130 0.00 0.00 0.00 4.40
880 892 3.437741 CCAGCATTTCCCTTTCATTTTGC 59.562 43.478 0.00 0.00 0.00 3.68
890 902 1.843368 CACATGACCAGCATTTCCCT 58.157 50.000 0.00 0.00 34.15 4.20
891 903 0.174162 GCACATGACCAGCATTTCCC 59.826 55.000 0.00 0.00 34.15 3.97
913 925 4.462483 GCAGGTATCTCATTCCAAAACCAA 59.538 41.667 0.00 0.00 0.00 3.67
918 930 3.010027 TGGTGCAGGTATCTCATTCCAAA 59.990 43.478 0.00 0.00 0.00 3.28
932 944 5.125900 TGATTTTATCACTCAATGGTGCAGG 59.874 40.000 0.00 0.00 37.16 4.85
971 984 5.065914 CAGTTCTTTGATTCCTTCCTGTCA 58.934 41.667 0.00 0.00 0.00 3.58
975 988 6.129179 TGAAACAGTTCTTTGATTCCTTCCT 58.871 36.000 0.00 0.00 34.60 3.36
1011 1024 3.807071 GCTTGAGATGCTTAAGGTCTAGC 59.193 47.826 4.29 0.00 37.89 3.42
1034 1047 0.179111 CCTCGTCGGCAAGCTAATGA 60.179 55.000 0.00 0.00 0.00 2.57
1275 1288 3.438434 GCAGAGACCTGTTCAGGAATTTC 59.562 47.826 23.45 11.45 42.35 2.17
1288 1301 0.252479 CTTGGCATGAGCAGAGACCT 59.748 55.000 0.00 0.00 44.61 3.85
1308 1321 4.380531 TGTAGAAAAGTGAAGCACTCAGG 58.619 43.478 0.00 0.00 44.62 3.86
1407 1420 0.250727 ACCAAGCTAGCCTCGCAAAA 60.251 50.000 12.13 0.00 0.00 2.44
1413 1426 2.379972 TCAGAGTACCAAGCTAGCCTC 58.620 52.381 12.13 9.64 0.00 4.70
1423 1436 5.462530 TGATTCGAAACTTCAGAGTACCA 57.537 39.130 0.00 0.00 34.21 3.25
1452 1465 5.315109 ACTTCCCTTTTGGAGTTTATAGGGT 59.685 40.000 0.00 0.00 46.24 4.34
1464 1477 2.290960 CCTCCTACCACTTCCCTTTTGG 60.291 54.545 0.00 0.00 39.97 3.28
1498 1511 0.108472 TGCAGCTGATCCAAGTCTCG 60.108 55.000 20.43 0.00 0.00 4.04
1519 1532 1.800681 CCTCGCCCGTTTTGGATTC 59.199 57.895 0.00 0.00 42.00 2.52
1533 1546 3.644884 ACTTGATAGTTATCGGCCTCG 57.355 47.619 0.00 0.00 35.48 4.63
1543 1556 7.554118 CCCAGTGACATGAATTACTTGATAGTT 59.446 37.037 0.00 0.00 35.78 2.24
1544 1557 7.050377 CCCAGTGACATGAATTACTTGATAGT 58.950 38.462 0.00 0.00 38.44 2.12
1845 1858 4.813027 TGCTGCAGATTTCCTTCAAATTC 58.187 39.130 20.43 0.00 34.60 2.17
1954 1967 7.038302 ACCACTGGTTACTGAATCATCTTCTAA 60.038 37.037 0.00 0.00 27.29 2.10
1989 2002 5.139435 TCTTCTCATAGGCAATCATACCG 57.861 43.478 0.00 0.00 0.00 4.02
2013 2026 7.970102 TGTATAGGTCAGTAACTCCAAGTTTT 58.030 34.615 0.00 0.00 39.51 2.43
2032 2045 5.736951 AGATAAGGCTGCCTCTTGTATAG 57.263 43.478 23.61 0.00 30.89 1.31
2038 2051 7.071824 AGACTTTATAAGATAAGGCTGCCTCTT 59.928 37.037 23.61 21.98 38.30 2.85
2070 2083 0.176910 TCGCACACACCTCAAAGTCA 59.823 50.000 0.00 0.00 0.00 3.41
2085 2098 1.150827 CAAACACATCTGCTCTCGCA 58.849 50.000 0.00 0.00 45.60 5.10
2161 2174 2.206322 TCCACCCCCAGCTTATACAT 57.794 50.000 0.00 0.00 0.00 2.29
2217 2230 0.846401 CTCCGATGACATTGTACGCG 59.154 55.000 3.53 3.53 0.00 6.01
2253 2266 6.126681 TGTCCAACATATCTGTCATCCATCTT 60.127 38.462 0.00 0.00 33.36 2.40
2341 2354 2.932614 GCTTCAGTCAGATGTTATGCGT 59.067 45.455 0.00 0.00 0.00 5.24
2343 2356 3.686241 TGTGCTTCAGTCAGATGTTATGC 59.314 43.478 0.00 0.00 0.00 3.14
2361 2374 0.387239 GTTCCTGCGTTCCATTGTGC 60.387 55.000 0.00 0.00 0.00 4.57
2368 2381 4.226761 CAAAAACTATGTTCCTGCGTTCC 58.773 43.478 0.00 0.00 0.00 3.62
2370 2383 3.552068 GCCAAAAACTATGTTCCTGCGTT 60.552 43.478 0.00 0.00 0.00 4.84
2373 2386 2.671070 CGGCCAAAAACTATGTTCCTGC 60.671 50.000 2.24 0.00 0.00 4.85
2380 2393 7.264373 AGATAAGATTCGGCCAAAAACTATG 57.736 36.000 2.24 0.00 0.00 2.23
2401 2415 3.002862 CGTCGAGCAGCTAGTTTCTAGAT 59.997 47.826 0.00 0.00 0.00 1.98
2410 2424 0.733729 AAGTACCGTCGAGCAGCTAG 59.266 55.000 0.00 0.00 0.00 3.42
2411 2425 1.131883 GAAAGTACCGTCGAGCAGCTA 59.868 52.381 0.00 0.00 0.00 3.32
2459 2482 1.913778 TTTCATCAGTGCTGGCATGT 58.086 45.000 0.00 0.00 0.00 3.21
2464 2487 4.482386 CAAACTCATTTCATCAGTGCTGG 58.518 43.478 0.00 0.00 0.00 4.85
2466 2489 3.057033 GCCAAACTCATTTCATCAGTGCT 60.057 43.478 0.00 0.00 0.00 4.40
2472 2495 4.741342 CTCTTGGCCAAACTCATTTCATC 58.259 43.478 20.91 0.00 0.00 2.92
2499 2522 7.335924 ACTTTTGTACACACTCACAAAGTACAT 59.664 33.333 14.79 0.00 43.41 2.29
2504 2527 6.842163 AGAACTTTTGTACACACTCACAAAG 58.158 36.000 10.84 10.84 43.41 2.77
2563 2601 5.468072 AGATAGCAAAGAAAGTGTCACACAG 59.532 40.000 11.40 0.00 36.74 3.66
2579 2627 9.658799 GCTCTCAATAAACCATATAGATAGCAA 57.341 33.333 0.00 0.00 0.00 3.91
2580 2628 8.815912 TGCTCTCAATAAACCATATAGATAGCA 58.184 33.333 0.00 0.00 0.00 3.49
2581 2629 9.311916 CTGCTCTCAATAAACCATATAGATAGC 57.688 37.037 0.00 0.00 0.00 2.97
2582 2630 9.311916 GCTGCTCTCAATAAACCATATAGATAG 57.688 37.037 0.00 0.00 0.00 2.08
2583 2631 9.040259 AGCTGCTCTCAATAAACCATATAGATA 57.960 33.333 0.00 0.00 0.00 1.98
2584 2632 7.915930 AGCTGCTCTCAATAAACCATATAGAT 58.084 34.615 0.00 0.00 0.00 1.98
2585 2633 7.308450 AGCTGCTCTCAATAAACCATATAGA 57.692 36.000 0.00 0.00 0.00 1.98
2586 2634 7.976135 AAGCTGCTCTCAATAAACCATATAG 57.024 36.000 1.00 0.00 0.00 1.31
2607 2655 1.949525 TCCAAGAGTGTGAAGCAAAGC 59.050 47.619 0.00 0.00 0.00 3.51
2611 2659 2.708216 TTGTCCAAGAGTGTGAAGCA 57.292 45.000 0.00 0.00 0.00 3.91
2612 2660 5.412594 TCATAATTGTCCAAGAGTGTGAAGC 59.587 40.000 0.00 0.00 0.00 3.86
2615 2663 5.355071 GCATCATAATTGTCCAAGAGTGTGA 59.645 40.000 0.00 0.00 0.00 3.58
2616 2664 5.356190 AGCATCATAATTGTCCAAGAGTGTG 59.644 40.000 0.00 0.00 0.00 3.82
2617 2665 5.356190 CAGCATCATAATTGTCCAAGAGTGT 59.644 40.000 0.00 0.00 0.00 3.55
2618 2666 5.732528 GCAGCATCATAATTGTCCAAGAGTG 60.733 44.000 0.00 0.00 0.00 3.51
2619 2667 4.337555 GCAGCATCATAATTGTCCAAGAGT 59.662 41.667 0.00 0.00 0.00 3.24
2620 2668 4.261489 GGCAGCATCATAATTGTCCAAGAG 60.261 45.833 0.00 0.00 0.00 2.85
2621 2669 3.633525 GGCAGCATCATAATTGTCCAAGA 59.366 43.478 0.00 0.00 0.00 3.02
2622 2670 3.382227 TGGCAGCATCATAATTGTCCAAG 59.618 43.478 0.00 0.00 0.00 3.61
2624 2672 2.689471 GTGGCAGCATCATAATTGTCCA 59.311 45.455 0.00 0.00 0.00 4.02
2628 2676 3.379057 TGACAGTGGCAGCATCATAATTG 59.621 43.478 0.00 0.00 0.00 2.32
2629 2677 3.379372 GTGACAGTGGCAGCATCATAATT 59.621 43.478 0.00 0.00 0.00 1.40
2633 2681 0.679002 GGTGACAGTGGCAGCATCAT 60.679 55.000 23.24 0.00 34.13 2.45
2637 2685 1.981951 TTCAGGTGACAGTGGCAGCA 61.982 55.000 28.97 7.56 36.28 4.41
2652 2702 6.864685 ACAATGCACTTCATACAAATGTTCAG 59.135 34.615 0.00 0.00 34.33 3.02
2694 2755 5.976534 CAGAATCAAGAGTCTTCCGATGTAG 59.023 44.000 1.26 0.00 32.93 2.74
2695 2756 5.679894 GCAGAATCAAGAGTCTTCCGATGTA 60.680 44.000 1.26 0.00 32.93 2.29
2696 2757 4.753233 CAGAATCAAGAGTCTTCCGATGT 58.247 43.478 1.26 0.00 32.93 3.06
2697 2758 3.555139 GCAGAATCAAGAGTCTTCCGATG 59.445 47.826 1.26 0.29 32.93 3.84
2698 2759 3.196469 TGCAGAATCAAGAGTCTTCCGAT 59.804 43.478 1.26 1.03 32.93 4.18
2699 2760 2.562738 TGCAGAATCAAGAGTCTTCCGA 59.437 45.455 1.26 0.00 32.93 4.55
2700 2761 2.928757 CTGCAGAATCAAGAGTCTTCCG 59.071 50.000 8.42 0.00 32.93 4.30
2701 2762 4.183101 CTCTGCAGAATCAAGAGTCTTCC 58.817 47.826 18.85 0.00 32.93 3.46
2702 2763 3.618150 GCTCTGCAGAATCAAGAGTCTTC 59.382 47.826 18.85 0.00 32.93 2.87
2703 2764 3.261390 AGCTCTGCAGAATCAAGAGTCTT 59.739 43.478 18.85 0.00 32.93 3.01
2705 2766 3.249986 AGCTCTGCAGAATCAAGAGTC 57.750 47.619 18.85 1.17 0.00 3.36
2722 2783 6.650120 TCTTTCTTCGGGATATTACAAAGCT 58.350 36.000 0.00 0.00 0.00 3.74
2723 2784 6.920569 TCTTTCTTCGGGATATTACAAAGC 57.079 37.500 0.00 0.00 0.00 3.51
2756 2817 4.811555 TTTGTCAAGGAAGAACACATCG 57.188 40.909 0.00 0.00 0.00 3.84
2779 2840 1.277440 CGCTTACCACGCGTGTTTT 59.723 52.632 34.81 21.79 45.13 2.43
2780 2841 2.932905 CGCTTACCACGCGTGTTT 59.067 55.556 34.81 24.20 45.13 2.83
2786 2847 4.382320 TGACCCCGCTTACCACGC 62.382 66.667 0.00 0.00 0.00 5.34
2789 2850 0.535553 GTTTGTGACCCCGCTTACCA 60.536 55.000 0.00 0.00 0.00 3.25
2790 2851 0.535553 TGTTTGTGACCCCGCTTACC 60.536 55.000 0.00 0.00 0.00 2.85
2795 2856 1.745232 TATGATGTTTGTGACCCCGC 58.255 50.000 0.00 0.00 0.00 6.13
2796 2857 2.033299 GCATATGATGTTTGTGACCCCG 59.967 50.000 6.97 0.00 0.00 5.73
2797 2858 2.362077 GGCATATGATGTTTGTGACCCC 59.638 50.000 6.97 0.00 0.00 4.95
2798 2859 3.023119 TGGCATATGATGTTTGTGACCC 58.977 45.455 6.97 0.00 0.00 4.46
2799 2860 3.489738 GCTGGCATATGATGTTTGTGACC 60.490 47.826 6.97 0.00 0.00 4.02
2800 2861 3.129113 TGCTGGCATATGATGTTTGTGAC 59.871 43.478 6.97 0.00 0.00 3.67
2806 2867 2.304092 CAGGTGCTGGCATATGATGTT 58.696 47.619 6.97 0.00 0.00 2.71
2816 2877 0.250727 TTTAGTCCACAGGTGCTGGC 60.251 55.000 0.00 0.00 35.51 4.85
2817 2878 1.347707 TCTTTAGTCCACAGGTGCTGG 59.652 52.381 0.00 0.00 35.51 4.85
2820 2881 3.127425 ACTTCTTTAGTCCACAGGTGC 57.873 47.619 0.00 0.00 28.23 5.01
2823 2884 6.693315 TCAAAAACTTCTTTAGTCCACAGG 57.307 37.500 0.00 0.00 35.54 4.00
2829 2890 6.918022 CCCACACATCAAAAACTTCTTTAGTC 59.082 38.462 0.00 0.00 35.54 2.59
2831 2892 7.038154 TCCCACACATCAAAAACTTCTTTAG 57.962 36.000 0.00 0.00 0.00 1.85
2833 2894 5.930837 TCCCACACATCAAAAACTTCTTT 57.069 34.783 0.00 0.00 0.00 2.52
2836 2897 5.262588 ACTTCCCACACATCAAAAACTTC 57.737 39.130 0.00 0.00 0.00 3.01
2837 2898 5.395214 GGAACTTCCCACACATCAAAAACTT 60.395 40.000 0.00 0.00 0.00 2.66
2840 2901 4.026744 TGGAACTTCCCACACATCAAAAA 58.973 39.130 5.30 0.00 35.03 1.94
2844 2905 2.862541 CTTGGAACTTCCCACACATCA 58.137 47.619 5.30 0.00 35.03 3.07
2845 2906 1.541588 GCTTGGAACTTCCCACACATC 59.458 52.381 5.30 0.00 35.03 3.06
2846 2907 1.145738 AGCTTGGAACTTCCCACACAT 59.854 47.619 5.30 0.00 35.03 3.21
2847 2908 0.550914 AGCTTGGAACTTCCCACACA 59.449 50.000 5.30 0.00 35.03 3.72
2848 2909 1.239347 GAGCTTGGAACTTCCCACAC 58.761 55.000 5.30 0.00 35.03 3.82
2849 2910 0.110486 GGAGCTTGGAACTTCCCACA 59.890 55.000 5.30 0.00 35.03 4.17
2850 2911 0.402121 AGGAGCTTGGAACTTCCCAC 59.598 55.000 5.30 0.00 35.03 4.61
2851 2912 0.401738 CAGGAGCTTGGAACTTCCCA 59.598 55.000 5.30 0.00 35.03 4.37
2860 2921 0.674581 TGTCAATCGCAGGAGCTTGG 60.675 55.000 0.00 0.00 39.10 3.61
2861 2922 1.129998 CTTGTCAATCGCAGGAGCTTG 59.870 52.381 0.00 0.00 39.10 4.01
2868 2929 2.414481 CTCTGTTCCTTGTCAATCGCAG 59.586 50.000 0.00 0.00 0.00 5.18
2869 2930 2.416747 CTCTGTTCCTTGTCAATCGCA 58.583 47.619 0.00 0.00 0.00 5.10
2870 2931 1.734465 CCTCTGTTCCTTGTCAATCGC 59.266 52.381 0.00 0.00 0.00 4.58
2871 2932 2.350522 CCCTCTGTTCCTTGTCAATCG 58.649 52.381 0.00 0.00 0.00 3.34
2872 2933 2.619074 CCCCCTCTGTTCCTTGTCAATC 60.619 54.545 0.00 0.00 0.00 2.67
2873 2934 1.355720 CCCCCTCTGTTCCTTGTCAAT 59.644 52.381 0.00 0.00 0.00 2.57
2874 2935 0.771127 CCCCCTCTGTTCCTTGTCAA 59.229 55.000 0.00 0.00 0.00 3.18
2875 2936 2.463441 CCCCCTCTGTTCCTTGTCA 58.537 57.895 0.00 0.00 0.00 3.58
2890 2951 1.338107 CCAGAAACAACCTTTCCCCC 58.662 55.000 0.00 0.00 0.00 5.40
2891 2952 1.133294 TCCCAGAAACAACCTTTCCCC 60.133 52.381 0.00 0.00 0.00 4.81
2892 2953 2.364324 GTTCCCAGAAACAACCTTTCCC 59.636 50.000 0.00 0.00 0.00 3.97
2893 2954 3.028130 TGTTCCCAGAAACAACCTTTCC 58.972 45.455 0.00 0.00 36.25 3.13
2894 2955 3.445805 TGTGTTCCCAGAAACAACCTTTC 59.554 43.478 0.00 0.00 40.62 2.62
2895 2956 3.436243 TGTGTTCCCAGAAACAACCTTT 58.564 40.909 0.00 0.00 40.62 3.11
2896 2957 3.094484 TGTGTTCCCAGAAACAACCTT 57.906 42.857 0.00 0.00 40.62 3.50
2897 2958 2.818751 TGTGTTCCCAGAAACAACCT 57.181 45.000 0.00 0.00 40.62 3.50
2898 2959 2.955660 TGATGTGTTCCCAGAAACAACC 59.044 45.455 0.00 0.00 40.62 3.77
2899 2960 3.632145 ACTGATGTGTTCCCAGAAACAAC 59.368 43.478 0.00 0.00 40.62 3.32
2900 2961 3.897239 ACTGATGTGTTCCCAGAAACAA 58.103 40.909 0.00 0.00 40.62 2.83
2901 2962 3.576078 ACTGATGTGTTCCCAGAAACA 57.424 42.857 0.00 0.00 36.82 2.83
2902 2963 3.632145 ACAACTGATGTGTTCCCAGAAAC 59.368 43.478 0.00 0.00 41.93 2.78
2903 2964 3.897239 ACAACTGATGTGTTCCCAGAAA 58.103 40.909 0.00 0.00 41.93 2.52
2904 2965 3.576078 ACAACTGATGTGTTCCCAGAA 57.424 42.857 0.00 0.00 41.93 3.02
2905 2966 3.646162 AGTACAACTGATGTGTTCCCAGA 59.354 43.478 0.34 0.00 43.77 3.86
2906 2967 4.008074 AGTACAACTGATGTGTTCCCAG 57.992 45.455 0.34 0.00 43.77 4.45
2923 2984 8.596380 GCTCTGTTTTTCTGTACATATCAGTAC 58.404 37.037 0.00 0.00 43.58 2.73
2924 2985 8.311109 TGCTCTGTTTTTCTGTACATATCAGTA 58.689 33.333 0.00 0.00 34.86 2.74
2925 2986 7.161404 TGCTCTGTTTTTCTGTACATATCAGT 58.839 34.615 0.00 0.00 34.86 3.41
2926 2987 7.332926 ACTGCTCTGTTTTTCTGTACATATCAG 59.667 37.037 0.00 0.72 0.00 2.90
2927 2988 7.161404 ACTGCTCTGTTTTTCTGTACATATCA 58.839 34.615 0.00 0.00 0.00 2.15
2928 2989 7.602517 ACTGCTCTGTTTTTCTGTACATATC 57.397 36.000 0.00 0.00 0.00 1.63
2929 2990 7.986085 AACTGCTCTGTTTTTCTGTACATAT 57.014 32.000 0.00 0.00 0.00 1.78
2930 2991 7.801716 AAACTGCTCTGTTTTTCTGTACATA 57.198 32.000 0.00 0.00 36.86 2.29
2931 2992 6.699575 AAACTGCTCTGTTTTTCTGTACAT 57.300 33.333 0.00 0.00 36.86 2.29
2932 2993 6.509418 AAAACTGCTCTGTTTTTCTGTACA 57.491 33.333 10.49 0.00 44.65 2.90
2941 3002 5.810074 ACGCAAAATAAAAACTGCTCTGTTT 59.190 32.000 0.00 0.00 41.32 2.83
2942 3003 5.231991 CACGCAAAATAAAAACTGCTCTGTT 59.768 36.000 0.00 0.00 32.52 3.16
2943 3004 4.739716 CACGCAAAATAAAAACTGCTCTGT 59.260 37.500 0.00 0.00 32.52 3.41
2944 3005 4.739716 ACACGCAAAATAAAAACTGCTCTG 59.260 37.500 0.00 0.00 32.52 3.35
2945 3006 4.739716 CACACGCAAAATAAAAACTGCTCT 59.260 37.500 0.00 0.00 32.52 4.09
2946 3007 4.737765 TCACACGCAAAATAAAAACTGCTC 59.262 37.500 0.00 0.00 32.52 4.26
2947 3008 4.677584 TCACACGCAAAATAAAAACTGCT 58.322 34.783 0.00 0.00 32.52 4.24
2948 3009 5.574815 ATCACACGCAAAATAAAAACTGC 57.425 34.783 0.00 0.00 0.00 4.40
2949 3010 9.907576 TTTTTATCACACGCAAAATAAAAACTG 57.092 25.926 11.76 0.00 38.05 3.16
2952 3013 9.907576 CTGTTTTTATCACACGCAAAATAAAAA 57.092 25.926 11.76 11.76 39.44 1.94
2953 3014 9.302345 TCTGTTTTTATCACACGCAAAATAAAA 57.698 25.926 0.00 0.00 33.83 1.52
2954 3015 8.858003 TCTGTTTTTATCACACGCAAAATAAA 57.142 26.923 0.00 0.00 0.00 1.40
2955 3016 7.114247 GCTCTGTTTTTATCACACGCAAAATAA 59.886 33.333 0.00 0.00 0.00 1.40
2956 3017 6.580791 GCTCTGTTTTTATCACACGCAAAATA 59.419 34.615 0.00 0.00 0.00 1.40
2957 3018 5.402270 GCTCTGTTTTTATCACACGCAAAAT 59.598 36.000 0.00 0.00 0.00 1.82
2958 3019 4.737765 GCTCTGTTTTTATCACACGCAAAA 59.262 37.500 0.00 0.00 0.00 2.44
2959 3020 4.201960 TGCTCTGTTTTTATCACACGCAAA 60.202 37.500 0.00 0.00 0.00 3.68
2960 3021 3.313803 TGCTCTGTTTTTATCACACGCAA 59.686 39.130 0.00 0.00 0.00 4.85
2961 3022 2.875317 TGCTCTGTTTTTATCACACGCA 59.125 40.909 0.00 0.00 0.00 5.24
2962 3023 3.058914 ACTGCTCTGTTTTTATCACACGC 60.059 43.478 0.00 0.00 0.00 5.34
2963 3024 4.732285 ACTGCTCTGTTTTTATCACACG 57.268 40.909 0.00 0.00 0.00 4.49
2964 3025 5.821204 ACAACTGCTCTGTTTTTATCACAC 58.179 37.500 0.00 0.00 0.00 3.82
2965 3026 6.449635 AACAACTGCTCTGTTTTTATCACA 57.550 33.333 0.00 0.00 33.16 3.58
2966 3027 6.972328 TGAAACAACTGCTCTGTTTTTATCAC 59.028 34.615 11.08 1.68 44.85 3.06
2967 3028 7.094508 TGAAACAACTGCTCTGTTTTTATCA 57.905 32.000 11.08 4.43 44.85 2.15
2968 3029 7.985634 TTGAAACAACTGCTCTGTTTTTATC 57.014 32.000 11.08 2.47 44.85 1.75
2969 3030 8.196771 TGATTGAAACAACTGCTCTGTTTTTAT 58.803 29.630 11.08 8.51 44.85 1.40
2970 3031 7.542890 TGATTGAAACAACTGCTCTGTTTTTA 58.457 30.769 11.08 5.26 44.85 1.52
2971 3032 6.397272 TGATTGAAACAACTGCTCTGTTTTT 58.603 32.000 11.08 5.74 44.85 1.94
2972 3033 5.964758 TGATTGAAACAACTGCTCTGTTTT 58.035 33.333 11.08 0.00 44.85 2.43
2973 3034 5.581126 TGATTGAAACAACTGCTCTGTTT 57.419 34.783 10.00 10.00 46.89 2.83
2974 3035 5.357878 TCTTGATTGAAACAACTGCTCTGTT 59.642 36.000 0.00 0.00 38.65 3.16
2975 3036 4.883585 TCTTGATTGAAACAACTGCTCTGT 59.116 37.500 0.00 0.00 0.00 3.41
2976 3037 5.210715 GTCTTGATTGAAACAACTGCTCTG 58.789 41.667 0.00 0.00 0.00 3.35
2977 3038 4.883585 TGTCTTGATTGAAACAACTGCTCT 59.116 37.500 0.00 0.00 0.00 4.09
2978 3039 5.173774 TGTCTTGATTGAAACAACTGCTC 57.826 39.130 0.00 0.00 0.00 4.26
2979 3040 5.343249 GTTGTCTTGATTGAAACAACTGCT 58.657 37.500 9.34 0.00 44.98 4.24
2980 3041 5.626258 GTTGTCTTGATTGAAACAACTGC 57.374 39.130 9.34 0.00 44.98 4.40
2984 3045 6.691754 TGCTAGTTGTCTTGATTGAAACAA 57.308 33.333 0.00 0.00 0.00 2.83
2985 3046 5.277974 GCTGCTAGTTGTCTTGATTGAAACA 60.278 40.000 0.00 0.00 0.00 2.83
2986 3047 5.149977 GCTGCTAGTTGTCTTGATTGAAAC 58.850 41.667 0.00 0.00 0.00 2.78
2987 3048 4.821260 TGCTGCTAGTTGTCTTGATTGAAA 59.179 37.500 0.00 0.00 0.00 2.69
2988 3049 4.388485 TGCTGCTAGTTGTCTTGATTGAA 58.612 39.130 0.00 0.00 0.00 2.69
2989 3050 4.006780 TGCTGCTAGTTGTCTTGATTGA 57.993 40.909 0.00 0.00 0.00 2.57
2990 3051 4.393990 TGATGCTGCTAGTTGTCTTGATTG 59.606 41.667 0.00 0.00 0.00 2.67
2991 3052 4.582869 TGATGCTGCTAGTTGTCTTGATT 58.417 39.130 0.00 0.00 0.00 2.57
2992 3053 4.212143 TGATGCTGCTAGTTGTCTTGAT 57.788 40.909 0.00 0.00 0.00 2.57
2993 3054 3.683365 TGATGCTGCTAGTTGTCTTGA 57.317 42.857 0.00 0.00 0.00 3.02
2994 3055 6.615264 ATTATGATGCTGCTAGTTGTCTTG 57.385 37.500 0.00 0.00 0.00 3.02
2995 3056 8.915057 ATAATTATGATGCTGCTAGTTGTCTT 57.085 30.769 0.00 0.00 0.00 3.01
2996 3057 8.373981 AGATAATTATGATGCTGCTAGTTGTCT 58.626 33.333 1.78 0.00 0.00 3.41
2997 3058 8.545229 AGATAATTATGATGCTGCTAGTTGTC 57.455 34.615 1.78 0.00 0.00 3.18
2998 3059 8.915057 AAGATAATTATGATGCTGCTAGTTGT 57.085 30.769 1.78 0.00 0.00 3.32
3022 3083 9.413048 CCGCCAAGTGTTTTTCTTTAATAATAA 57.587 29.630 0.00 0.00 0.00 1.40
3023 3084 7.542824 GCCGCCAAGTGTTTTTCTTTAATAATA 59.457 33.333 0.00 0.00 0.00 0.98
3024 3085 6.367695 GCCGCCAAGTGTTTTTCTTTAATAAT 59.632 34.615 0.00 0.00 0.00 1.28
3025 3086 5.692654 GCCGCCAAGTGTTTTTCTTTAATAA 59.307 36.000 0.00 0.00 0.00 1.40
3026 3087 5.221263 TGCCGCCAAGTGTTTTTCTTTAATA 60.221 36.000 0.00 0.00 0.00 0.98
3027 3088 4.055360 GCCGCCAAGTGTTTTTCTTTAAT 58.945 39.130 0.00 0.00 0.00 1.40
3028 3089 3.119101 TGCCGCCAAGTGTTTTTCTTTAA 60.119 39.130 0.00 0.00 0.00 1.52
3029 3090 2.427453 TGCCGCCAAGTGTTTTTCTTTA 59.573 40.909 0.00 0.00 0.00 1.85
3030 3091 1.205893 TGCCGCCAAGTGTTTTTCTTT 59.794 42.857 0.00 0.00 0.00 2.52
3031 3092 0.820871 TGCCGCCAAGTGTTTTTCTT 59.179 45.000 0.00 0.00 0.00 2.52
3032 3093 0.820871 TTGCCGCCAAGTGTTTTTCT 59.179 45.000 0.00 0.00 0.00 2.52
3033 3094 1.646189 TTTGCCGCCAAGTGTTTTTC 58.354 45.000 0.00 0.00 31.52 2.29
3034 3095 2.323968 ATTTGCCGCCAAGTGTTTTT 57.676 40.000 0.00 0.00 31.52 1.94
3035 3096 2.158971 AGAATTTGCCGCCAAGTGTTTT 60.159 40.909 0.00 0.00 31.52 2.43
3036 3097 1.412343 AGAATTTGCCGCCAAGTGTTT 59.588 42.857 0.00 0.00 31.52 2.83
3037 3098 1.000274 GAGAATTTGCCGCCAAGTGTT 60.000 47.619 0.00 0.00 31.52 3.32
3038 3099 0.598065 GAGAATTTGCCGCCAAGTGT 59.402 50.000 0.00 0.00 31.52 3.55
3039 3100 0.883833 AGAGAATTTGCCGCCAAGTG 59.116 50.000 0.00 0.00 31.52 3.16
3040 3101 0.883833 CAGAGAATTTGCCGCCAAGT 59.116 50.000 0.00 0.00 31.52 3.16
3041 3102 0.457337 GCAGAGAATTTGCCGCCAAG 60.457 55.000 0.00 0.00 35.54 3.61
3042 3103 1.586028 GCAGAGAATTTGCCGCCAA 59.414 52.632 0.00 0.00 35.54 4.52
3043 3104 3.277133 GCAGAGAATTTGCCGCCA 58.723 55.556 0.00 0.00 35.54 5.69
3048 3109 0.881118 TTGTCGGGCAGAGAATTTGC 59.119 50.000 0.00 0.00 40.80 3.68
3049 3110 2.160417 GTCTTGTCGGGCAGAGAATTTG 59.840 50.000 0.00 0.00 31.33 2.32
3050 3111 2.224523 TGTCTTGTCGGGCAGAGAATTT 60.225 45.455 0.00 0.00 31.33 1.82
3051 3112 1.347707 TGTCTTGTCGGGCAGAGAATT 59.652 47.619 0.00 0.00 31.33 2.17
3052 3113 0.976641 TGTCTTGTCGGGCAGAGAAT 59.023 50.000 0.00 0.00 31.33 2.40
3053 3114 0.756294 TTGTCTTGTCGGGCAGAGAA 59.244 50.000 0.00 0.00 0.00 2.87
3054 3115 0.976641 ATTGTCTTGTCGGGCAGAGA 59.023 50.000 0.00 0.00 0.00 3.10
3055 3116 1.813513 AATTGTCTTGTCGGGCAGAG 58.186 50.000 0.00 0.00 0.00 3.35
3056 3117 2.935238 GCTAATTGTCTTGTCGGGCAGA 60.935 50.000 0.00 0.00 0.00 4.26
3057 3118 1.398390 GCTAATTGTCTTGTCGGGCAG 59.602 52.381 0.00 0.00 0.00 4.85
3058 3119 1.271108 TGCTAATTGTCTTGTCGGGCA 60.271 47.619 0.00 0.00 0.00 5.36
3059 3120 1.448985 TGCTAATTGTCTTGTCGGGC 58.551 50.000 0.00 0.00 0.00 6.13
3060 3121 2.811431 TGTTGCTAATTGTCTTGTCGGG 59.189 45.455 0.00 0.00 0.00 5.14
3061 3122 4.685169 ATGTTGCTAATTGTCTTGTCGG 57.315 40.909 0.00 0.00 0.00 4.79
3062 3123 6.907212 GGATTATGTTGCTAATTGTCTTGTCG 59.093 38.462 0.00 0.00 0.00 4.35
3063 3124 7.989826 AGGATTATGTTGCTAATTGTCTTGTC 58.010 34.615 0.00 0.00 0.00 3.18
3064 3125 7.944729 AGGATTATGTTGCTAATTGTCTTGT 57.055 32.000 0.00 0.00 0.00 3.16
3065 3126 9.643693 AAAAGGATTATGTTGCTAATTGTCTTG 57.356 29.630 0.00 0.00 0.00 3.02
3106 3167 9.198475 AGGATTATGCTGATTTCTTTTTCTCAT 57.802 29.630 0.00 0.00 0.00 2.90
3107 3168 8.585471 AGGATTATGCTGATTTCTTTTTCTCA 57.415 30.769 0.00 0.00 0.00 3.27
3108 3169 9.866798 AAAGGATTATGCTGATTTCTTTTTCTC 57.133 29.630 0.00 0.00 0.00 2.87
3116 3177 9.189723 GCTCATTAAAAGGATTATGCTGATTTC 57.810 33.333 0.00 0.00 0.00 2.17
3117 3178 8.698210 TGCTCATTAAAAGGATTATGCTGATTT 58.302 29.630 0.00 0.00 0.00 2.17
3118 3179 8.241497 TGCTCATTAAAAGGATTATGCTGATT 57.759 30.769 0.00 0.00 0.00 2.57
3119 3180 7.828508 TGCTCATTAAAAGGATTATGCTGAT 57.171 32.000 0.00 0.00 0.00 2.90
3120 3181 7.255695 CCATGCTCATTAAAAGGATTATGCTGA 60.256 37.037 0.00 0.00 0.00 4.26
3121 3182 6.866770 CCATGCTCATTAAAAGGATTATGCTG 59.133 38.462 0.00 0.00 0.00 4.41
3122 3183 6.517864 GCCATGCTCATTAAAAGGATTATGCT 60.518 38.462 0.00 0.00 0.00 3.79
3123 3184 5.636543 GCCATGCTCATTAAAAGGATTATGC 59.363 40.000 0.00 0.00 0.00 3.14
3124 3185 6.751157 TGCCATGCTCATTAAAAGGATTATG 58.249 36.000 0.00 0.00 0.00 1.90
3125 3186 6.982160 TGCCATGCTCATTAAAAGGATTAT 57.018 33.333 0.00 0.00 0.00 1.28
3126 3187 6.324512 ACATGCCATGCTCATTAAAAGGATTA 59.675 34.615 4.17 0.00 0.00 1.75
3127 3188 5.129815 ACATGCCATGCTCATTAAAAGGATT 59.870 36.000 4.17 0.00 0.00 3.01
3128 3189 4.652421 ACATGCCATGCTCATTAAAAGGAT 59.348 37.500 4.17 0.00 0.00 3.24
3129 3190 4.025360 ACATGCCATGCTCATTAAAAGGA 58.975 39.130 4.17 0.00 0.00 3.36
3130 3191 4.395959 ACATGCCATGCTCATTAAAAGG 57.604 40.909 4.17 0.00 0.00 3.11
3131 3192 6.812656 TGTAAACATGCCATGCTCATTAAAAG 59.187 34.615 4.17 0.00 0.00 2.27
3132 3193 6.695429 TGTAAACATGCCATGCTCATTAAAA 58.305 32.000 4.17 0.00 0.00 1.52
3133 3194 6.278172 TGTAAACATGCCATGCTCATTAAA 57.722 33.333 4.17 0.00 0.00 1.52
3134 3195 5.911378 TGTAAACATGCCATGCTCATTAA 57.089 34.783 4.17 0.00 0.00 1.40
3135 3196 5.163530 CCTTGTAAACATGCCATGCTCATTA 60.164 40.000 4.17 0.00 0.00 1.90
3136 3197 4.382254 CCTTGTAAACATGCCATGCTCATT 60.382 41.667 4.17 0.00 0.00 2.57
3137 3198 3.131577 CCTTGTAAACATGCCATGCTCAT 59.868 43.478 4.17 0.00 0.00 2.90
3138 3199 2.492881 CCTTGTAAACATGCCATGCTCA 59.507 45.455 4.17 0.00 0.00 4.26
3139 3200 2.159198 CCCTTGTAAACATGCCATGCTC 60.159 50.000 4.17 0.00 0.00 4.26
3140 3201 1.826720 CCCTTGTAAACATGCCATGCT 59.173 47.619 4.17 0.00 0.00 3.79
3141 3202 1.550072 ACCCTTGTAAACATGCCATGC 59.450 47.619 4.17 0.00 0.00 4.06
3142 3203 2.824936 TGACCCTTGTAAACATGCCATG 59.175 45.455 2.40 2.40 0.00 3.66
3143 3204 3.091545 CTGACCCTTGTAAACATGCCAT 58.908 45.455 0.00 0.00 0.00 4.40
3144 3205 2.107378 TCTGACCCTTGTAAACATGCCA 59.893 45.455 0.00 0.00 0.00 4.92
3145 3206 2.790433 TCTGACCCTTGTAAACATGCC 58.210 47.619 0.00 0.00 0.00 4.40
3146 3207 3.758554 ACATCTGACCCTTGTAAACATGC 59.241 43.478 0.00 0.00 0.00 4.06
3147 3208 4.761739 ACACATCTGACCCTTGTAAACATG 59.238 41.667 0.00 0.00 0.00 3.21
3148 3209 4.985538 ACACATCTGACCCTTGTAAACAT 58.014 39.130 0.00 0.00 0.00 2.71
3149 3210 4.102524 AGACACATCTGACCCTTGTAAACA 59.897 41.667 0.00 0.00 32.29 2.83
3150 3211 4.642429 AGACACATCTGACCCTTGTAAAC 58.358 43.478 0.00 0.00 32.29 2.01
3151 3212 4.974645 AGACACATCTGACCCTTGTAAA 57.025 40.909 0.00 0.00 32.29 2.01
3168 3229 3.473923 TCAACTTCAGATGTGCAGACA 57.526 42.857 0.00 0.00 36.22 3.41
3169 3230 5.368256 AAATCAACTTCAGATGTGCAGAC 57.632 39.130 0.00 0.00 0.00 3.51
3170 3231 7.391275 TCATAAAATCAACTTCAGATGTGCAGA 59.609 33.333 0.00 0.00 0.00 4.26
3171 3232 7.532571 TCATAAAATCAACTTCAGATGTGCAG 58.467 34.615 0.00 0.00 0.00 4.41
3172 3233 7.451501 TCATAAAATCAACTTCAGATGTGCA 57.548 32.000 0.00 0.00 0.00 4.57
3173 3234 6.471519 GCTCATAAAATCAACTTCAGATGTGC 59.528 38.462 0.00 0.00 0.00 4.57
3174 3235 6.971184 GGCTCATAAAATCAACTTCAGATGTG 59.029 38.462 0.00 0.00 0.00 3.21
3175 3236 6.096001 GGGCTCATAAAATCAACTTCAGATGT 59.904 38.462 0.00 0.00 0.00 3.06
3176 3237 6.095860 TGGGCTCATAAAATCAACTTCAGATG 59.904 38.462 0.00 0.00 0.00 2.90
3177 3238 6.096001 GTGGGCTCATAAAATCAACTTCAGAT 59.904 38.462 0.00 0.00 0.00 2.90
3178 3239 5.415701 GTGGGCTCATAAAATCAACTTCAGA 59.584 40.000 0.00 0.00 0.00 3.27
3179 3240 5.183713 TGTGGGCTCATAAAATCAACTTCAG 59.816 40.000 0.00 0.00 0.00 3.02
3180 3241 5.076182 TGTGGGCTCATAAAATCAACTTCA 58.924 37.500 0.00 0.00 0.00 3.02
3181 3242 5.643379 TGTGGGCTCATAAAATCAACTTC 57.357 39.130 0.00 0.00 0.00 3.01
3182 3243 5.716228 TCATGTGGGCTCATAAAATCAACTT 59.284 36.000 0.00 0.00 0.00 2.66
3183 3244 5.263599 TCATGTGGGCTCATAAAATCAACT 58.736 37.500 0.00 0.00 0.00 3.16
3184 3245 5.581126 TCATGTGGGCTCATAAAATCAAC 57.419 39.130 0.00 0.00 0.00 3.18
3185 3246 5.392919 CGTTCATGTGGGCTCATAAAATCAA 60.393 40.000 0.00 0.00 0.00 2.57
3186 3247 4.096231 CGTTCATGTGGGCTCATAAAATCA 59.904 41.667 0.00 0.00 0.00 2.57
3187 3248 4.335315 TCGTTCATGTGGGCTCATAAAATC 59.665 41.667 0.00 0.00 0.00 2.17
3188 3249 4.269183 TCGTTCATGTGGGCTCATAAAAT 58.731 39.130 0.00 0.00 0.00 1.82
3189 3250 3.680490 TCGTTCATGTGGGCTCATAAAA 58.320 40.909 0.00 0.00 0.00 1.52
3190 3251 3.342377 TCGTTCATGTGGGCTCATAAA 57.658 42.857 0.00 0.00 0.00 1.40
3191 3252 3.342377 TTCGTTCATGTGGGCTCATAA 57.658 42.857 0.00 0.00 0.00 1.90
3192 3253 3.006940 GTTTCGTTCATGTGGGCTCATA 58.993 45.455 0.00 0.00 0.00 2.15
3193 3254 1.812571 GTTTCGTTCATGTGGGCTCAT 59.187 47.619 0.00 0.00 0.00 2.90
3194 3255 1.234821 GTTTCGTTCATGTGGGCTCA 58.765 50.000 0.00 0.00 0.00 4.26
3195 3256 1.197721 CTGTTTCGTTCATGTGGGCTC 59.802 52.381 0.00 0.00 0.00 4.70
3196 3257 1.202758 TCTGTTTCGTTCATGTGGGCT 60.203 47.619 0.00 0.00 0.00 5.19
3197 3258 1.197721 CTCTGTTTCGTTCATGTGGGC 59.802 52.381 0.00 0.00 0.00 5.36
3198 3259 1.197721 GCTCTGTTTCGTTCATGTGGG 59.802 52.381 0.00 0.00 0.00 4.61
3199 3260 1.197721 GGCTCTGTTTCGTTCATGTGG 59.802 52.381 0.00 0.00 0.00 4.17
3200 3261 2.146342 AGGCTCTGTTTCGTTCATGTG 58.854 47.619 0.00 0.00 0.00 3.21
3201 3262 2.037772 AGAGGCTCTGTTTCGTTCATGT 59.962 45.455 17.96 0.00 0.00 3.21
3202 3263 2.693069 AGAGGCTCTGTTTCGTTCATG 58.307 47.619 17.96 0.00 0.00 3.07
3203 3264 3.409026 AAGAGGCTCTGTTTCGTTCAT 57.591 42.857 19.53 0.00 0.00 2.57
3204 3265 2.872245 CAAAGAGGCTCTGTTTCGTTCA 59.128 45.455 19.53 0.00 0.00 3.18
3205 3266 2.224314 CCAAAGAGGCTCTGTTTCGTTC 59.776 50.000 19.53 0.00 0.00 3.95
3206 3267 2.222027 CCAAAGAGGCTCTGTTTCGTT 58.778 47.619 19.53 4.26 0.00 3.85
3207 3268 1.884235 CCAAAGAGGCTCTGTTTCGT 58.116 50.000 19.53 0.00 0.00 3.85
3218 3279 8.743714 AGAAAGATACAATTTTAGCCAAAGAGG 58.256 33.333 0.00 0.00 41.84 3.69
3230 3291 9.674068 GAGGGAGTAGAAAGAAAGATACAATTT 57.326 33.333 0.00 0.00 0.00 1.82
3231 3292 8.268605 GGAGGGAGTAGAAAGAAAGATACAATT 58.731 37.037 0.00 0.00 0.00 2.32
3232 3293 7.418025 CGGAGGGAGTAGAAAGAAAGATACAAT 60.418 40.741 0.00 0.00 0.00 2.71
3233 3294 6.127423 CGGAGGGAGTAGAAAGAAAGATACAA 60.127 42.308 0.00 0.00 0.00 2.41
3234 3295 5.360144 CGGAGGGAGTAGAAAGAAAGATACA 59.640 44.000 0.00 0.00 0.00 2.29
3235 3296 5.360429 ACGGAGGGAGTAGAAAGAAAGATAC 59.640 44.000 0.00 0.00 0.00 2.24
3236 3297 5.516984 ACGGAGGGAGTAGAAAGAAAGATA 58.483 41.667 0.00 0.00 0.00 1.98
3237 3298 4.354662 ACGGAGGGAGTAGAAAGAAAGAT 58.645 43.478 0.00 0.00 0.00 2.40
3238 3299 3.775910 ACGGAGGGAGTAGAAAGAAAGA 58.224 45.455 0.00 0.00 0.00 2.52
3239 3300 4.496360 GAACGGAGGGAGTAGAAAGAAAG 58.504 47.826 0.00 0.00 0.00 2.62
3240 3301 3.057033 CGAACGGAGGGAGTAGAAAGAAA 60.057 47.826 0.00 0.00 0.00 2.52
3241 3302 2.490903 CGAACGGAGGGAGTAGAAAGAA 59.509 50.000 0.00 0.00 0.00 2.52
3242 3303 2.089980 CGAACGGAGGGAGTAGAAAGA 58.910 52.381 0.00 0.00 0.00 2.52
3243 3304 1.134560 CCGAACGGAGGGAGTAGAAAG 59.865 57.143 7.53 0.00 37.50 2.62
3244 3305 1.180029 CCGAACGGAGGGAGTAGAAA 58.820 55.000 7.53 0.00 37.50 2.52
3245 3306 0.329261 TCCGAACGGAGGGAGTAGAA 59.671 55.000 12.04 0.00 39.76 2.10
3246 3307 0.329261 TTCCGAACGGAGGGAGTAGA 59.671 55.000 15.34 0.00 46.06 2.59
3247 3308 1.400737 ATTCCGAACGGAGGGAGTAG 58.599 55.000 15.34 0.00 46.06 2.57
3248 3309 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
3249 3310 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
3250 3311 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
3251 3312 1.753073 GAGTAATTCCGAACGGAGGGA 59.247 52.381 15.34 2.49 46.06 4.20
3252 3313 1.535437 CGAGTAATTCCGAACGGAGGG 60.535 57.143 15.34 0.00 46.06 4.30
3253 3314 1.133790 ACGAGTAATTCCGAACGGAGG 59.866 52.381 15.34 4.28 46.06 4.30
3254 3315 2.448219 GACGAGTAATTCCGAACGGAG 58.552 52.381 15.34 5.60 46.06 4.63
3255 3316 1.133025 GGACGAGTAATTCCGAACGGA 59.867 52.381 12.04 12.04 43.52 4.69
3256 3317 1.135315 TGGACGAGTAATTCCGAACGG 60.135 52.381 6.94 6.94 0.00 4.44
3257 3318 2.267188 TGGACGAGTAATTCCGAACG 57.733 50.000 0.00 0.00 0.00 3.95
3258 3319 3.841643 TCTTGGACGAGTAATTCCGAAC 58.158 45.455 0.00 0.00 0.00 3.95
3259 3320 4.524316 TTCTTGGACGAGTAATTCCGAA 57.476 40.909 0.00 0.00 0.00 4.30
3260 3321 4.524316 TTTCTTGGACGAGTAATTCCGA 57.476 40.909 0.00 0.00 0.00 4.55
3261 3322 4.868171 TCATTTCTTGGACGAGTAATTCCG 59.132 41.667 0.00 0.00 0.00 4.30
3262 3323 6.737254 TTCATTTCTTGGACGAGTAATTCC 57.263 37.500 0.00 0.00 0.00 3.01
3263 3324 7.752695 ACATTCATTTCTTGGACGAGTAATTC 58.247 34.615 0.00 0.00 0.00 2.17
3264 3325 7.687941 ACATTCATTTCTTGGACGAGTAATT 57.312 32.000 0.00 0.00 0.00 1.40
3265 3326 8.964476 ATACATTCATTTCTTGGACGAGTAAT 57.036 30.769 0.00 0.00 0.00 1.89
3266 3327 8.258007 AGATACATTCATTTCTTGGACGAGTAA 58.742 33.333 0.00 0.00 0.00 2.24
3267 3328 7.782049 AGATACATTCATTTCTTGGACGAGTA 58.218 34.615 0.00 0.00 0.00 2.59
3268 3329 6.644347 AGATACATTCATTTCTTGGACGAGT 58.356 36.000 0.00 0.00 0.00 4.18
3269 3330 8.138074 TCTAGATACATTCATTTCTTGGACGAG 58.862 37.037 0.00 0.00 0.00 4.18
3270 3331 8.007405 TCTAGATACATTCATTTCTTGGACGA 57.993 34.615 0.00 0.00 0.00 4.20
3271 3332 8.824159 ATCTAGATACATTCATTTCTTGGACG 57.176 34.615 2.53 0.00 0.00 4.79
3272 3333 9.995003 AGATCTAGATACATTCATTTCTTGGAC 57.005 33.333 4.89 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.