Multiple sequence alignment - TraesCS7D01G091200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G091200 chr7D 100.000 3443 0 0 1 3443 54660055 54656613 0.000000e+00 6359.0
1 TraesCS7D01G091200 chr7D 81.792 2455 225 91 667 2998 54748955 54751310 0.000000e+00 1853.0
2 TraesCS7D01G091200 chr7D 91.441 444 25 7 3004 3443 163616379 163615945 7.040000e-167 597.0
3 TraesCS7D01G091200 chr7D 96.386 332 5 4 3004 3332 113149796 113149469 1.200000e-149 540.0
4 TraesCS7D01G091200 chr7D 100.000 151 0 0 3655 3805 54656401 54656251 2.890000e-71 279.0
5 TraesCS7D01G091200 chr7D 98.675 151 2 0 3655 3805 113136311 113136161 6.270000e-68 268.0
6 TraesCS7D01G091200 chr7D 98.013 151 3 0 3655 3805 163615902 163615752 2.910000e-66 263.0
7 TraesCS7D01G091200 chr7D 95.690 116 2 2 3328 3443 113136466 113136354 2.330000e-42 183.0
8 TraesCS7D01G091200 chr7D 81.277 235 32 9 156 388 54748644 54748868 3.020000e-41 180.0
9 TraesCS7D01G091200 chr7A 81.588 2292 216 115 805 2994 58386953 58384766 0.000000e+00 1705.0
10 TraesCS7D01G091200 chr7A 90.858 886 31 18 1004 1859 58356622 58357487 0.000000e+00 1142.0
11 TraesCS7D01G091200 chr7A 90.931 408 12 7 608 997 58336273 58336673 3.370000e-145 525.0
12 TraesCS7D01G091200 chr7A 90.288 278 22 5 154 429 58336008 58336282 3.610000e-95 359.0
13 TraesCS7D01G091200 chr7A 88.889 180 13 4 2826 2998 58384164 58383985 8.280000e-52 215.0
14 TraesCS7D01G091200 chr7A 92.517 147 11 0 47 193 58335861 58336007 1.070000e-50 211.0
15 TraesCS7D01G091200 chr7A 97.619 42 1 0 7 48 58335788 58335829 5.270000e-09 73.1
16 TraesCS7D01G091200 chr1D 96.396 444 5 5 3004 3443 385124933 385124497 0.000000e+00 721.0
17 TraesCS7D01G091200 chr1D 85.647 425 54 5 2998 3420 457119224 457119643 1.250000e-119 440.0
18 TraesCS7D01G091200 chr1D 98.675 151 2 0 3655 3805 385124456 385124306 6.270000e-68 268.0
19 TraesCS7D01G091200 chr1D 91.710 193 13 3 426 617 84405632 84405822 8.100000e-67 265.0
20 TraesCS7D01G091200 chr1D 90.728 151 14 0 3655 3805 457119704 457119854 6.450000e-48 202.0
21 TraesCS7D01G091200 chr2D 95.701 442 10 4 3004 3443 601588612 601588178 0.000000e+00 702.0
22 TraesCS7D01G091200 chr2D 90.909 198 13 3 420 616 11483960 11484153 1.050000e-65 261.0
23 TraesCS7D01G091200 chr2D 97.351 151 4 0 3655 3805 601588131 601587981 1.360000e-64 257.0
24 TraesCS7D01G091200 chr2D 76.142 394 85 8 3027 3415 572402531 572402142 8.340000e-47 198.0
25 TraesCS7D01G091200 chr2D 88.660 97 9 2 256 351 75753114 75753019 2.400000e-22 117.0
26 TraesCS7D01G091200 chr3D 95.023 442 14 4 3004 3443 433168249 433167814 0.000000e+00 688.0
27 TraesCS7D01G091200 chr3D 94.475 181 7 2 430 607 506177311 506177131 3.740000e-70 276.0
28 TraesCS7D01G091200 chr3D 98.013 151 3 0 3655 3805 433167770 433167620 2.910000e-66 263.0
29 TraesCS7D01G091200 chr4D 95.034 443 10 4 3005 3443 496025882 496025448 0.000000e+00 686.0
30 TraesCS7D01G091200 chr4D 99.338 151 1 0 3655 3805 496025405 496025255 1.350000e-69 274.0
31 TraesCS7D01G091200 chr5D 95.631 412 11 5 3004 3411 562022670 562022262 0.000000e+00 654.0
32 TraesCS7D01G091200 chr5D 99.338 151 1 0 3655 3805 562021984 562021834 1.350000e-69 274.0
33 TraesCS7D01G091200 chr4A 94.054 185 10 1 426 609 712846560 712846744 2.890000e-71 279.0
34 TraesCS7D01G091200 chr4A 90.909 143 10 1 2859 2998 670967241 670967099 5.020000e-44 189.0
35 TraesCS7D01G091200 chr6A 93.158 190 11 2 430 618 109973947 109973759 1.040000e-70 278.0
36 TraesCS7D01G091200 chr2B 93.923 181 11 0 432 612 118465813 118465633 1.350000e-69 274.0
37 TraesCS7D01G091200 chr2B 93.956 182 9 1 430 609 771215138 771215319 1.350000e-69 274.0
38 TraesCS7D01G091200 chr1B 91.710 193 14 2 426 617 286670621 286670812 2.250000e-67 267.0
39 TraesCS7D01G091200 chr6B 91.623 191 16 0 426 616 465696171 465695981 8.100000e-67 265.0
40 TraesCS7D01G091200 chr2A 80.000 150 30 0 3655 3804 580254370 580254519 1.120000e-20 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G091200 chr7D 54656251 54660055 3804 True 3319.000 6359 100.00000 1 3805 2 chr7D.!!$R2 3804
1 TraesCS7D01G091200 chr7D 54748644 54751310 2666 False 1016.500 1853 81.53450 156 2998 2 chr7D.!!$F1 2842
2 TraesCS7D01G091200 chr7D 163615752 163616379 627 True 430.000 597 94.72700 3004 3805 2 chr7D.!!$R4 801
3 TraesCS7D01G091200 chr7A 58356622 58357487 865 False 1142.000 1142 90.85800 1004 1859 1 chr7A.!!$F1 855
4 TraesCS7D01G091200 chr7A 58383985 58386953 2968 True 960.000 1705 85.23850 805 2998 2 chr7A.!!$R1 2193
5 TraesCS7D01G091200 chr7A 58335788 58336673 885 False 292.025 525 92.83875 7 997 4 chr7A.!!$F2 990
6 TraesCS7D01G091200 chr1D 385124306 385124933 627 True 494.500 721 97.53550 3004 3805 2 chr1D.!!$R1 801
7 TraesCS7D01G091200 chr1D 457119224 457119854 630 False 321.000 440 88.18750 2998 3805 2 chr1D.!!$F2 807
8 TraesCS7D01G091200 chr2D 601587981 601588612 631 True 479.500 702 96.52600 3004 3805 2 chr2D.!!$R3 801
9 TraesCS7D01G091200 chr3D 433167620 433168249 629 True 475.500 688 96.51800 3004 3805 2 chr3D.!!$R2 801
10 TraesCS7D01G091200 chr4D 496025255 496025882 627 True 480.000 686 97.18600 3005 3805 2 chr4D.!!$R1 800
11 TraesCS7D01G091200 chr5D 562021834 562022670 836 True 464.000 654 97.48450 3004 3805 2 chr5D.!!$R1 801

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
123 157 1.032014 TGCAGGGCTTTCAGTTTGTC 58.968 50.0 0.0 0.00 0.0 3.18 F
1380 1552 0.038166 TGCACTTCAATCCCCTGACC 59.962 55.0 0.0 0.00 0.0 4.02 F
2166 2427 0.249073 CAAGCGGTCCTGGATAGTCG 60.249 60.0 0.0 3.65 0.0 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1394 1588 0.397941 TTCTCCACCCACTGCAAGAG 59.602 55.0 0.00 0.0 37.43 2.85 R
2368 2629 0.039618 ATTCCCCATGGAGCGTTTGT 59.960 50.0 15.22 0.0 43.07 2.83 R
3169 4226 0.988145 TCGAGGGGCAATCCATTCCT 60.988 55.0 0.00 0.0 37.22 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 82 7.977853 TGTATCCTAGATCGGTCTTGTTTTAAC 59.022 37.037 2.08 0.00 35.87 2.01
55 89 6.990349 AGATCGGTCTTGTTTTAACTTTCAGA 59.010 34.615 0.00 0.00 0.00 3.27
59 93 5.969435 GGTCTTGTTTTAACTTTCAGAACCG 59.031 40.000 0.00 0.00 0.00 4.44
66 100 9.425577 TGTTTTAACTTTCAGAACCGAAAATTT 57.574 25.926 0.00 0.00 34.59 1.82
111 145 5.687770 ACAACAAAAATAAAATGCAGGGC 57.312 34.783 0.00 0.00 0.00 5.19
115 149 6.558771 ACAAAAATAAAATGCAGGGCTTTC 57.441 33.333 0.00 0.00 0.00 2.62
123 157 1.032014 TGCAGGGCTTTCAGTTTGTC 58.968 50.000 0.00 0.00 0.00 3.18
168 202 1.155390 CCCGCCCATCCCTCTACTA 59.845 63.158 0.00 0.00 0.00 1.82
193 227 6.565234 TCGTTCTCTTCCTTCATAGTCATTC 58.435 40.000 0.00 0.00 0.00 2.67
194 228 6.378564 TCGTTCTCTTCCTTCATAGTCATTCT 59.621 38.462 0.00 0.00 0.00 2.40
195 229 6.475076 CGTTCTCTTCCTTCATAGTCATTCTG 59.525 42.308 0.00 0.00 0.00 3.02
196 230 6.477053 TCTCTTCCTTCATAGTCATTCTGG 57.523 41.667 0.00 0.00 0.00 3.86
197 231 5.028549 TCTTCCTTCATAGTCATTCTGGC 57.971 43.478 0.00 0.00 0.00 4.85
202 277 5.649395 TCCTTCATAGTCATTCTGGCAAAAG 59.351 40.000 0.00 0.00 0.00 2.27
205 280 6.500684 TCATAGTCATTCTGGCAAAAGAAC 57.499 37.500 0.00 0.00 38.95 3.01
208 283 5.130292 AGTCATTCTGGCAAAAGAACATG 57.870 39.130 0.00 0.00 38.95 3.21
230 305 5.930405 TGCATGTCATCGCATATTACAATC 58.070 37.500 6.01 0.00 31.95 2.67
239 314 9.034544 TCATCGCATATTACAATCTATATGTGC 57.965 33.333 0.00 0.00 41.56 4.57
254 331 2.370281 TGTGCGGCAAAAGTTTTCAA 57.630 40.000 3.23 0.00 0.00 2.69
273 350 8.725046 GTTTTCAAATCTTTATATCGCAACTCG 58.275 33.333 0.00 0.00 40.15 4.18
295 372 1.067706 CGCACCAATCTTGATGGCAAA 60.068 47.619 0.00 0.00 41.89 3.68
365 442 2.754664 CTTTCAGGGTGAAGCCGGCT 62.755 60.000 27.08 27.08 37.70 5.52
369 446 4.785453 GGGTGAAGCCGGCTGGAG 62.785 72.222 33.60 0.00 37.49 3.86
391 468 4.275282 CGCATCTTAAAGCAGCGC 57.725 55.556 0.00 0.00 41.95 5.92
393 470 1.936398 GCATCTTAAAGCAGCGCGC 60.936 57.895 26.66 26.66 42.91 6.86
429 506 4.634004 CCGCCTGATGACTAACAACAAATA 59.366 41.667 0.00 0.00 31.27 1.40
430 507 5.220662 CCGCCTGATGACTAACAACAAATAG 60.221 44.000 0.00 0.00 31.27 1.73
431 508 5.351465 CGCCTGATGACTAACAACAAATAGT 59.649 40.000 0.00 0.00 35.13 2.12
432 509 6.128282 CGCCTGATGACTAACAACAAATAGTT 60.128 38.462 0.00 0.00 42.42 2.24
433 510 7.573096 CGCCTGATGACTAACAACAAATAGTTT 60.573 37.037 0.00 0.00 38.74 2.66
434 511 7.538678 GCCTGATGACTAACAACAAATAGTTTG 59.461 37.037 1.15 1.15 45.95 2.93
480 557 7.849804 TTTTAAGGATGTCACATCTAAGCTC 57.150 36.000 17.46 0.00 0.00 4.09
481 558 6.798427 TTAAGGATGTCACATCTAAGCTCT 57.202 37.500 17.46 2.09 0.00 4.09
482 559 4.935352 AGGATGTCACATCTAAGCTCTC 57.065 45.455 17.46 0.00 0.00 3.20
483 560 4.285020 AGGATGTCACATCTAAGCTCTCA 58.715 43.478 17.46 0.00 0.00 3.27
484 561 4.099266 AGGATGTCACATCTAAGCTCTCAC 59.901 45.833 17.46 0.00 0.00 3.51
485 562 4.142071 GGATGTCACATCTAAGCTCTCACA 60.142 45.833 17.46 0.00 0.00 3.58
486 563 4.871933 TGTCACATCTAAGCTCTCACAA 57.128 40.909 0.00 0.00 0.00 3.33
487 564 5.213891 TGTCACATCTAAGCTCTCACAAA 57.786 39.130 0.00 0.00 0.00 2.83
488 565 5.798132 TGTCACATCTAAGCTCTCACAAAT 58.202 37.500 0.00 0.00 0.00 2.32
489 566 6.935167 TGTCACATCTAAGCTCTCACAAATA 58.065 36.000 0.00 0.00 0.00 1.40
490 567 7.559486 TGTCACATCTAAGCTCTCACAAATAT 58.441 34.615 0.00 0.00 0.00 1.28
491 568 8.695456 TGTCACATCTAAGCTCTCACAAATATA 58.305 33.333 0.00 0.00 0.00 0.86
492 569 9.703892 GTCACATCTAAGCTCTCACAAATATAT 57.296 33.333 0.00 0.00 0.00 0.86
501 578 9.511272 AAGCTCTCACAAATATATAATGCATCA 57.489 29.630 0.00 0.00 0.00 3.07
502 579 9.511272 AGCTCTCACAAATATATAATGCATCAA 57.489 29.630 0.00 0.00 0.00 2.57
503 580 9.552114 GCTCTCACAAATATATAATGCATCAAC 57.448 33.333 0.00 0.00 0.00 3.18
557 634 2.225019 CACAAACTGAGTGGACATGAGC 59.775 50.000 0.00 0.00 33.43 4.26
558 635 2.105477 ACAAACTGAGTGGACATGAGCT 59.895 45.455 0.00 0.00 0.00 4.09
559 636 3.144506 CAAACTGAGTGGACATGAGCTT 58.855 45.455 0.00 0.00 0.00 3.74
560 637 4.202357 ACAAACTGAGTGGACATGAGCTTA 60.202 41.667 0.00 0.00 0.00 3.09
561 638 3.883830 ACTGAGTGGACATGAGCTTAG 57.116 47.619 0.00 0.72 0.00 2.18
562 639 3.435275 ACTGAGTGGACATGAGCTTAGA 58.565 45.455 0.00 0.00 0.00 2.10
563 640 4.029520 ACTGAGTGGACATGAGCTTAGAT 58.970 43.478 0.00 0.00 0.00 1.98
564 641 4.141981 ACTGAGTGGACATGAGCTTAGATG 60.142 45.833 0.00 0.00 0.00 2.90
565 642 3.771479 TGAGTGGACATGAGCTTAGATGT 59.229 43.478 0.00 6.66 35.46 3.06
566 643 4.118410 GAGTGGACATGAGCTTAGATGTG 58.882 47.826 10.67 0.00 32.85 3.21
567 644 3.771479 AGTGGACATGAGCTTAGATGTGA 59.229 43.478 10.67 0.00 32.85 3.58
568 645 3.868077 GTGGACATGAGCTTAGATGTGAC 59.132 47.826 10.67 5.19 32.85 3.67
569 646 3.515104 TGGACATGAGCTTAGATGTGACA 59.485 43.478 10.67 7.59 32.85 3.58
570 647 4.162888 TGGACATGAGCTTAGATGTGACAT 59.837 41.667 0.00 0.00 32.85 3.06
571 648 5.363580 TGGACATGAGCTTAGATGTGACATA 59.636 40.000 10.67 0.00 32.85 2.29
572 649 6.127083 TGGACATGAGCTTAGATGTGACATAA 60.127 38.462 10.67 0.00 32.85 1.90
573 650 6.201806 GGACATGAGCTTAGATGTGACATAAC 59.798 42.308 10.67 0.00 32.85 1.89
574 651 6.882656 ACATGAGCTTAGATGTGACATAACT 58.117 36.000 0.00 0.00 31.47 2.24
575 652 8.011844 ACATGAGCTTAGATGTGACATAACTA 57.988 34.615 0.00 0.00 31.47 2.24
576 653 8.646004 ACATGAGCTTAGATGTGACATAACTAT 58.354 33.333 0.00 0.00 31.47 2.12
577 654 8.923683 CATGAGCTTAGATGTGACATAACTATG 58.076 37.037 0.00 0.92 39.55 2.23
604 681 6.312399 CATCTAGATGTGTCCTAGACAGAC 57.688 45.833 22.42 0.00 43.57 3.51
605 682 4.783055 TCTAGATGTGTCCTAGACAGACC 58.217 47.826 0.00 0.00 43.57 3.85
606 683 2.741145 AGATGTGTCCTAGACAGACCC 58.259 52.381 0.00 0.00 43.57 4.46
607 684 2.043115 AGATGTGTCCTAGACAGACCCA 59.957 50.000 0.00 0.00 43.57 4.51
608 685 2.391926 TGTGTCCTAGACAGACCCAA 57.608 50.000 0.00 0.00 43.57 4.12
609 686 1.968493 TGTGTCCTAGACAGACCCAAC 59.032 52.381 0.00 0.00 43.57 3.77
610 687 1.968493 GTGTCCTAGACAGACCCAACA 59.032 52.381 0.00 0.00 43.57 3.33
611 688 2.367567 GTGTCCTAGACAGACCCAACAA 59.632 50.000 0.00 0.00 43.57 2.83
612 689 2.367567 TGTCCTAGACAGACCCAACAAC 59.632 50.000 0.00 0.00 37.67 3.32
613 690 2.367567 GTCCTAGACAGACCCAACAACA 59.632 50.000 0.00 0.00 32.09 3.33
614 691 3.042682 TCCTAGACAGACCCAACAACAA 58.957 45.455 0.00 0.00 0.00 2.83
615 692 3.456644 TCCTAGACAGACCCAACAACAAA 59.543 43.478 0.00 0.00 0.00 2.83
616 693 4.104102 TCCTAGACAGACCCAACAACAAAT 59.896 41.667 0.00 0.00 0.00 2.32
633 710 5.205759 ACAAATCCTTTGCTTTCTTCCAG 57.794 39.130 0.00 0.00 44.39 3.86
635 712 3.814504 ATCCTTTGCTTTCTTCCAGGA 57.185 42.857 0.00 0.00 34.91 3.86
761 863 2.187424 CTGCTCTGCTCTGGGCTC 59.813 66.667 0.00 0.00 42.39 4.70
787 916 2.644992 CTTCCTTTGCGCCACCAC 59.355 61.111 4.18 0.00 0.00 4.16
797 926 4.329545 GCCACCACGAGGGAGCAA 62.330 66.667 3.29 0.00 41.15 3.91
827 964 3.966026 GAGGGAGCAACGACGACGG 62.966 68.421 12.58 0.00 44.46 4.79
831 968 4.415332 AGCAACGACGACGGCGAT 62.415 61.111 32.70 16.94 44.46 4.58
832 969 2.577644 GCAACGACGACGGCGATA 60.578 61.111 32.70 0.00 44.46 2.92
886 1023 6.870965 ACAGAAGCCATTATCTATCGATCAAC 59.129 38.462 0.00 0.00 0.00 3.18
893 1030 6.710295 CCATTATCTATCGATCAACCAAACCA 59.290 38.462 0.00 0.00 0.00 3.67
894 1031 7.391554 CCATTATCTATCGATCAACCAAACCAT 59.608 37.037 0.00 0.00 0.00 3.55
1112 1270 0.161658 CAGCACAAGTACGTTCGCAG 59.838 55.000 0.00 0.00 0.00 5.18
1171 1329 4.601019 TCTTGCTTTCTTTCTTTCTTGCG 58.399 39.130 0.00 0.00 0.00 4.85
1242 1412 2.224523 TGCTTCAAGAACTGGGATTCGT 60.225 45.455 0.00 0.00 33.57 3.85
1245 1415 1.067142 TCAAGAACTGGGATTCGTCGG 60.067 52.381 0.00 0.00 33.57 4.79
1246 1416 1.067142 CAAGAACTGGGATTCGTCGGA 60.067 52.381 0.00 0.00 33.57 4.55
1247 1417 0.818296 AGAACTGGGATTCGTCGGAG 59.182 55.000 0.00 0.00 33.57 4.63
1281 1451 1.003866 GCGATATTTGCCTCGACCAAC 60.004 52.381 0.00 0.00 37.05 3.77
1295 1465 2.633509 CCAACAGAAGCAGCAGCCC 61.634 63.158 0.00 0.00 43.56 5.19
1296 1466 2.282745 AACAGAAGCAGCAGCCCC 60.283 61.111 0.00 0.00 43.56 5.80
1297 1467 3.137385 AACAGAAGCAGCAGCCCCA 62.137 57.895 0.00 0.00 43.56 4.96
1298 1468 3.060615 CAGAAGCAGCAGCCCCAC 61.061 66.667 0.00 0.00 43.56 4.61
1299 1469 4.357279 AGAAGCAGCAGCCCCACC 62.357 66.667 0.00 0.00 43.56 4.61
1300 1470 4.666253 GAAGCAGCAGCCCCACCA 62.666 66.667 0.00 0.00 43.56 4.17
1319 1489 3.721706 CACCAGGCACCTCTCCCC 61.722 72.222 0.00 0.00 0.00 4.81
1369 1541 4.016444 AGTTCTTGGTTTCTTGCACTTCA 58.984 39.130 0.00 0.00 0.00 3.02
1374 1546 2.627699 TGGTTTCTTGCACTTCAATCCC 59.372 45.455 0.00 0.00 33.57 3.85
1375 1547 2.029020 GGTTTCTTGCACTTCAATCCCC 60.029 50.000 0.00 0.00 33.57 4.81
1376 1548 2.893489 GTTTCTTGCACTTCAATCCCCT 59.107 45.455 0.00 0.00 33.57 4.79
1377 1549 2.205022 TCTTGCACTTCAATCCCCTG 57.795 50.000 0.00 0.00 33.57 4.45
1378 1550 1.704628 TCTTGCACTTCAATCCCCTGA 59.295 47.619 0.00 0.00 33.57 3.86
1380 1552 0.038166 TGCACTTCAATCCCCTGACC 59.962 55.000 0.00 0.00 0.00 4.02
1381 1553 0.681243 GCACTTCAATCCCCTGACCC 60.681 60.000 0.00 0.00 0.00 4.46
1394 1588 2.903135 CCCTGACCCTGATCTATCTTCC 59.097 54.545 0.00 0.00 0.00 3.46
1434 1638 3.181967 CGCGAGCTTGGACTTCCG 61.182 66.667 0.00 0.00 39.43 4.30
1440 1644 1.139853 GAGCTTGGACTTCCGGATGAT 59.860 52.381 23.15 8.08 39.43 2.45
1546 1750 2.135903 ATCACGGCAATCACCCCACA 62.136 55.000 0.00 0.00 0.00 4.17
1594 1802 2.093625 TCAACAGTGCGCGCTTAATTAG 59.906 45.455 33.29 16.18 0.00 1.73
1601 1809 2.101878 GCGCGCTTAATTAGTTTCTGC 58.898 47.619 26.67 0.00 0.00 4.26
1729 1963 0.587737 CTTCTACGACTGCTCTCGCG 60.588 60.000 0.00 0.00 39.65 5.87
1764 1999 2.452295 TCACTTGAGAGAGCTTGCTG 57.548 50.000 0.00 0.00 0.00 4.41
1846 2090 1.452953 ATTGCATGCAGCCGGAGATG 61.453 55.000 21.50 0.51 44.83 2.90
1884 2128 4.113815 CCTGCATCCCAAGCCGGA 62.114 66.667 5.05 0.00 38.48 5.14
1956 2200 1.448893 GCAACCGTCGAATAGCCCA 60.449 57.895 0.00 0.00 0.00 5.36
1979 2223 5.226194 AGACTATGATTTCTGCTCCATCC 57.774 43.478 0.00 0.00 0.00 3.51
1984 2228 2.306805 TGATTTCTGCTCCATCCACTGT 59.693 45.455 0.00 0.00 0.00 3.55
1992 2236 1.135139 CTCCATCCACTGTCAGGTACG 59.865 57.143 4.53 0.00 0.00 3.67
2014 2270 5.013547 CGTACCTGATCAATCCTCCTATCT 58.986 45.833 0.00 0.00 0.00 1.98
2021 2277 2.975489 TCAATCCTCCTATCTGGCCTTC 59.025 50.000 3.32 0.00 35.26 3.46
2033 2289 1.566231 CTGGCCTTCCTTCTTGGGTAT 59.434 52.381 3.32 0.00 36.20 2.73
2060 2321 2.484889 ACAGCTTCTTGGTTTCTCGAC 58.515 47.619 0.00 0.00 0.00 4.20
2094 2355 6.758416 CCAGAGAATGAGATCGTTCAATGTTA 59.242 38.462 15.30 0.00 42.71 2.41
2097 2358 9.039870 AGAGAATGAGATCGTTCAATGTTAATC 57.960 33.333 15.30 3.81 42.71 1.75
2114 2375 3.616956 AATCATGGCAGTTCGAAGAGA 57.383 42.857 0.00 0.00 38.43 3.10
2115 2376 3.834489 ATCATGGCAGTTCGAAGAGAT 57.166 42.857 0.00 0.00 38.43 2.75
2118 2379 3.068732 TCATGGCAGTTCGAAGAGATAGG 59.931 47.826 0.00 0.00 38.43 2.57
2121 2382 1.866063 GCAGTTCGAAGAGATAGGCCG 60.866 57.143 0.00 0.00 38.43 6.13
2127 2388 1.068194 CGAAGAGATAGGCCGTGATCC 60.068 57.143 10.64 4.51 0.00 3.36
2151 2412 4.858680 GCCCCCTACTCGCCAAGC 62.859 72.222 0.00 0.00 0.00 4.01
2162 2423 2.908015 GCCAAGCGGTCCTGGATA 59.092 61.111 9.50 0.00 33.28 2.59
2166 2427 0.249073 CAAGCGGTCCTGGATAGTCG 60.249 60.000 0.00 3.65 0.00 4.18
2169 2430 2.857744 CGGTCCTGGATAGTCGGGC 61.858 68.421 0.00 0.00 33.26 6.13
2170 2431 1.457831 GGTCCTGGATAGTCGGGCT 60.458 63.158 0.00 0.00 33.26 5.19
2177 2438 1.342076 TGGATAGTCGGGCTCAGAAGT 60.342 52.381 0.00 0.00 0.00 3.01
2186 2447 1.476891 GGGCTCAGAAGTATCGTGTGA 59.523 52.381 0.00 0.00 0.00 3.58
2203 2464 1.216710 GAAGGGACTCCTGACGCTG 59.783 63.158 0.00 0.00 44.07 5.18
2205 2466 2.680352 GGGACTCCTGACGCTGGA 60.680 66.667 0.00 5.60 0.00 3.86
2209 2470 2.898738 CTCCTGACGCTGGAGCAT 59.101 61.111 15.78 0.00 41.35 3.79
2213 2474 0.674581 CCTGACGCTGGAGCATTCAA 60.675 55.000 0.00 0.00 42.21 2.69
2214 2475 1.159285 CTGACGCTGGAGCATTCAAA 58.841 50.000 0.00 0.00 42.21 2.69
2287 2548 2.892425 CACGCCGGATTCAGCTCC 60.892 66.667 5.05 0.00 0.00 4.70
2315 2576 1.807139 CCATCACCACGACAATCACA 58.193 50.000 0.00 0.00 0.00 3.58
2316 2577 1.733912 CCATCACCACGACAATCACAG 59.266 52.381 0.00 0.00 0.00 3.66
2344 2605 3.384789 TCGAAATCATAGACACCCCAGAG 59.615 47.826 0.00 0.00 0.00 3.35
2345 2606 3.133003 CGAAATCATAGACACCCCAGAGT 59.867 47.826 0.00 0.00 0.00 3.24
2346 2607 4.383118 CGAAATCATAGACACCCCAGAGTT 60.383 45.833 0.00 0.00 0.00 3.01
2355 2616 0.763223 ACCCCAGAGTTCGGTCTTGT 60.763 55.000 0.00 0.00 0.00 3.16
2366 2627 1.954146 GGTCTTGTCGCACGCTTCA 60.954 57.895 0.00 0.00 0.00 3.02
2368 2629 1.346365 GTCTTGTCGCACGCTTCATA 58.654 50.000 0.00 0.00 0.00 2.15
2374 2635 0.436913 TCGCACGCTTCATACAAACG 59.563 50.000 0.00 0.00 0.00 3.60
2386 2647 0.693622 TACAAACGCTCCATGGGGAA 59.306 50.000 18.46 0.00 44.38 3.97
2529 2794 2.174854 AGAGTTCTAGGGAGGAGAGAGC 59.825 54.545 0.00 0.00 0.00 4.09
2530 2795 1.216930 AGTTCTAGGGAGGAGAGAGCC 59.783 57.143 0.00 0.00 0.00 4.70
2531 2796 0.558712 TTCTAGGGAGGAGAGAGCCC 59.441 60.000 0.00 0.00 42.37 5.19
2534 2799 3.640761 GGGAGGAGAGAGCCCTTG 58.359 66.667 0.00 0.00 38.85 3.61
2535 2800 1.002274 GGGAGGAGAGAGCCCTTGA 59.998 63.158 0.00 0.00 38.85 3.02
2536 2801 0.399806 GGGAGGAGAGAGCCCTTGAT 60.400 60.000 0.00 0.00 38.85 2.57
2537 2802 0.758123 GGAGGAGAGAGCCCTTGATG 59.242 60.000 0.00 0.00 33.36 3.07
2538 2803 1.690845 GGAGGAGAGAGCCCTTGATGA 60.691 57.143 0.00 0.00 33.36 2.92
2539 2804 2.328319 GAGGAGAGAGCCCTTGATGAT 58.672 52.381 0.00 0.00 33.36 2.45
2540 2805 2.037511 GAGGAGAGAGCCCTTGATGATG 59.962 54.545 0.00 0.00 33.36 3.07
2541 2806 1.072015 GGAGAGAGCCCTTGATGATGG 59.928 57.143 0.00 0.00 0.00 3.51
2630 2898 0.651031 GCTACGCCCGAATTCTTGTC 59.349 55.000 3.52 0.00 0.00 3.18
2631 2899 0.921347 CTACGCCCGAATTCTTGTCG 59.079 55.000 3.52 4.57 38.24 4.35
2686 2954 1.242076 GCTCAGTTCAGTGCATGGTT 58.758 50.000 0.00 0.00 0.00 3.67
2687 2955 2.224499 TGCTCAGTTCAGTGCATGGTTA 60.224 45.455 0.00 0.00 33.56 2.85
2689 2957 3.866066 GCTCAGTTCAGTGCATGGTTAGA 60.866 47.826 0.00 0.00 0.00 2.10
2690 2958 4.511527 CTCAGTTCAGTGCATGGTTAGAT 58.488 43.478 0.00 0.00 0.00 1.98
2692 2960 6.048732 TCAGTTCAGTGCATGGTTAGATTA 57.951 37.500 0.00 0.00 0.00 1.75
2693 2961 6.653020 TCAGTTCAGTGCATGGTTAGATTAT 58.347 36.000 0.00 0.00 0.00 1.28
2694 2962 6.763135 TCAGTTCAGTGCATGGTTAGATTATC 59.237 38.462 0.00 0.00 0.00 1.75
2695 2963 6.765036 CAGTTCAGTGCATGGTTAGATTATCT 59.235 38.462 0.00 0.00 0.00 1.98
2696 2964 7.281774 CAGTTCAGTGCATGGTTAGATTATCTT 59.718 37.037 0.00 0.00 0.00 2.40
2697 2965 7.281774 AGTTCAGTGCATGGTTAGATTATCTTG 59.718 37.037 0.00 0.00 0.00 3.02
2699 2967 6.057533 CAGTGCATGGTTAGATTATCTTGGA 58.942 40.000 0.00 0.00 0.00 3.53
2701 2969 6.769822 AGTGCATGGTTAGATTATCTTGGAAG 59.230 38.462 0.00 0.00 0.00 3.46
2702 2970 6.767902 GTGCATGGTTAGATTATCTTGGAAGA 59.232 38.462 0.00 0.00 39.78 2.87
2703 2971 7.446625 GTGCATGGTTAGATTATCTTGGAAGAT 59.553 37.037 0.00 7.07 46.85 2.40
2707 2975 9.621239 ATGGTTAGATTATCTTGGAAGATCCTA 57.379 33.333 5.14 4.26 44.30 2.94
2708 2976 8.871125 TGGTTAGATTATCTTGGAAGATCCTAC 58.129 37.037 5.14 0.00 44.30 3.18
2709 2977 9.095700 GGTTAGATTATCTTGGAAGATCCTACT 57.904 37.037 5.14 4.91 44.30 2.57
2712 2980 8.789767 AGATTATCTTGGAAGATCCTACTTCA 57.210 34.615 5.14 0.00 44.30 3.02
2713 2981 9.391227 AGATTATCTTGGAAGATCCTACTTCAT 57.609 33.333 5.14 0.00 44.30 2.57
2714 2982 9.434420 GATTATCTTGGAAGATCCTACTTCATG 57.566 37.037 5.14 0.00 44.30 3.07
2715 2983 5.028549 TCTTGGAAGATCCTACTTCATGC 57.971 43.478 0.00 0.00 45.39 4.06
2716 2984 4.718774 TCTTGGAAGATCCTACTTCATGCT 59.281 41.667 0.00 0.00 45.39 3.79
2717 2985 5.899547 TCTTGGAAGATCCTACTTCATGCTA 59.100 40.000 0.00 0.00 45.39 3.49
2719 2987 6.560003 TGGAAGATCCTACTTCATGCTAAA 57.440 37.500 0.00 0.00 45.39 1.85
2722 2990 7.051000 GGAAGATCCTACTTCATGCTAAAACT 58.949 38.462 0.00 0.00 45.39 2.66
2723 2991 7.011857 GGAAGATCCTACTTCATGCTAAAACTG 59.988 40.741 0.00 0.00 45.39 3.16
2725 2993 6.820656 AGATCCTACTTCATGCTAAAACTGTG 59.179 38.462 0.00 0.00 0.00 3.66
2726 2994 4.695455 TCCTACTTCATGCTAAAACTGTGC 59.305 41.667 0.00 0.00 0.00 4.57
2727 2995 4.455533 CCTACTTCATGCTAAAACTGTGCA 59.544 41.667 0.00 0.00 41.13 4.57
2728 2996 4.916983 ACTTCATGCTAAAACTGTGCAA 57.083 36.364 0.00 0.00 40.24 4.08
2729 2997 5.458041 ACTTCATGCTAAAACTGTGCAAT 57.542 34.783 0.00 0.00 40.24 3.56
2730 2998 5.846203 ACTTCATGCTAAAACTGTGCAATT 58.154 33.333 0.00 0.00 40.24 2.32
2731 2999 5.693104 ACTTCATGCTAAAACTGTGCAATTG 59.307 36.000 0.00 0.00 40.24 2.32
2732 3000 3.989167 TCATGCTAAAACTGTGCAATTGC 59.011 39.130 23.69 23.69 40.24 3.56
2733 3001 3.731652 TGCTAAAACTGTGCAATTGCT 57.268 38.095 29.37 11.31 42.66 3.91
2734 3002 3.382855 TGCTAAAACTGTGCAATTGCTG 58.617 40.909 29.37 20.75 42.66 4.41
2735 3003 3.067883 TGCTAAAACTGTGCAATTGCTGA 59.932 39.130 29.37 15.52 42.66 4.26
2736 3004 4.240096 GCTAAAACTGTGCAATTGCTGAT 58.760 39.130 29.37 12.58 42.66 2.90
2737 3005 5.048154 TGCTAAAACTGTGCAATTGCTGATA 60.048 36.000 29.37 8.06 42.66 2.15
2738 3006 6.038356 GCTAAAACTGTGCAATTGCTGATAT 58.962 36.000 29.37 11.68 42.66 1.63
2739 3007 7.148103 TGCTAAAACTGTGCAATTGCTGATATA 60.148 33.333 29.37 6.89 42.66 0.86
2740 3008 7.864379 GCTAAAACTGTGCAATTGCTGATATAT 59.136 33.333 29.37 14.24 42.66 0.86
2741 3009 9.390795 CTAAAACTGTGCAATTGCTGATATATC 57.609 33.333 29.37 5.73 42.66 1.63
2749 3017 6.921307 TGCAATTGCTGATATATCTTTGCTTG 59.079 34.615 29.37 19.03 42.66 4.01
2757 3025 7.802251 GCTGATATATCTTTGCTTGCTTACTTG 59.198 37.037 13.79 0.00 0.00 3.16
2761 3030 4.552166 TCTTTGCTTGCTTACTTGTGAC 57.448 40.909 0.00 0.00 0.00 3.67
2780 3049 1.901464 GCCGGCTCAACTTTCCCAA 60.901 57.895 22.15 0.00 0.00 4.12
2810 3079 2.435059 GGGGACTTGTGAGCGAGC 60.435 66.667 0.00 0.00 0.00 5.03
2811 3080 2.659610 GGGACTTGTGAGCGAGCT 59.340 61.111 0.00 0.00 0.00 4.09
2812 3081 1.004440 GGGACTTGTGAGCGAGCTT 60.004 57.895 0.00 0.00 0.00 3.74
2813 3082 1.016653 GGGACTTGTGAGCGAGCTTC 61.017 60.000 0.00 0.00 0.00 3.86
2848 3117 2.575279 AGGGAGCTGACAAGACATGATT 59.425 45.455 0.00 0.00 0.00 2.57
2857 3126 6.331369 TGACAAGACATGATTCTTTTTCCC 57.669 37.500 0.00 0.00 33.31 3.97
2865 3134 4.270245 TGATTCTTTTTCCCAATGCCAC 57.730 40.909 0.00 0.00 0.00 5.01
2887 3156 6.272318 CACTTCTTGTGGTCAATTGCTTTTA 58.728 36.000 0.00 0.00 42.68 1.52
2922 3192 8.201464 TCTGTAAGAAACTGAATGTGTGTCTAA 58.799 33.333 0.00 0.00 42.31 2.10
2957 4009 7.970061 TGATACCTACAAACGTTGTGTATACTC 59.030 37.037 17.60 0.83 45.03 2.59
2967 4019 7.154435 ACGTTGTGTATACTCATGAGTTACT 57.846 36.000 32.14 19.21 42.54 2.24
2978 4030 5.246203 ACTCATGAGTTACTAGTTCCAGCAA 59.754 40.000 22.89 0.00 38.83 3.91
2998 4050 7.309744 CCAGCAAGATTAATTTGTAGTTTCCCA 60.310 37.037 10.20 0.00 0.00 4.37
2999 4051 7.756722 CAGCAAGATTAATTTGTAGTTTCCCAG 59.243 37.037 10.20 0.00 0.00 4.45
3000 4052 7.451566 AGCAAGATTAATTTGTAGTTTCCCAGT 59.548 33.333 10.20 0.00 0.00 4.00
3001 4053 7.542130 GCAAGATTAATTTGTAGTTTCCCAGTG 59.458 37.037 10.20 0.00 0.00 3.66
3002 4054 7.158099 AGATTAATTTGTAGTTTCCCAGTGC 57.842 36.000 0.00 0.00 0.00 4.40
3074 4126 9.466497 AAAACTTTATCAGAGAGGCAATCATAA 57.534 29.630 0.00 0.00 0.00 1.90
3263 4320 6.663093 TGATACAAGTGGAAAAAGGCACATAT 59.337 34.615 0.00 0.00 0.00 1.78
3264 4321 5.806654 ACAAGTGGAAAAAGGCACATATT 57.193 34.783 0.00 0.00 0.00 1.28
3773 4872 8.207545 ACATATGAGAAACTTGATAGGGTCTTC 58.792 37.037 10.38 0.00 0.00 2.87
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 7.546250 AGACCGATCTAGGATACATTTTGAT 57.454 36.000 0.00 0.00 41.41 2.57
48 82 6.039616 TCAACCAAATTTTCGGTTCTGAAAG 58.960 36.000 9.41 0.24 43.72 2.62
55 89 8.608317 CATAACTTTTCAACCAAATTTTCGGTT 58.392 29.630 7.03 7.03 46.52 4.44
59 93 8.825745 TGCTCATAACTTTTCAACCAAATTTTC 58.174 29.630 0.00 0.00 0.00 2.29
66 100 6.544197 TGTAAGTGCTCATAACTTTTCAACCA 59.456 34.615 0.00 0.00 38.73 3.67
71 105 8.850454 TTTGTTGTAAGTGCTCATAACTTTTC 57.150 30.769 0.00 0.00 38.73 2.29
111 145 5.114785 TCTCTCTCTCGACAAACTGAAAG 57.885 43.478 0.00 0.00 42.29 2.62
115 149 3.424302 CGACTCTCTCTCTCGACAAACTG 60.424 52.174 0.00 0.00 0.00 3.16
123 157 1.346879 CGCACGACTCTCTCTCTCG 59.653 63.158 0.00 0.00 0.00 4.04
148 182 2.070650 GTAGAGGGATGGGCGGGTT 61.071 63.158 0.00 0.00 0.00 4.11
168 202 6.723298 ATGACTATGAAGGAAGAGAACGAT 57.277 37.500 0.00 0.00 0.00 3.73
193 227 2.991190 GACATGCATGTTCTTTTGCCAG 59.009 45.455 31.82 1.92 41.95 4.85
194 228 2.364647 TGACATGCATGTTCTTTTGCCA 59.635 40.909 31.82 19.54 41.95 4.92
195 229 3.029320 TGACATGCATGTTCTTTTGCC 57.971 42.857 31.82 17.26 41.95 4.52
196 230 3.302434 CGATGACATGCATGTTCTTTTGC 59.698 43.478 31.82 17.95 41.95 3.68
197 231 3.302434 GCGATGACATGCATGTTCTTTTG 59.698 43.478 31.82 19.93 41.95 2.44
208 283 6.174451 AGATTGTAATATGCGATGACATGC 57.826 37.500 0.00 0.00 0.00 4.06
230 305 5.398169 TGAAAACTTTTGCCGCACATATAG 58.602 37.500 0.00 0.00 0.00 1.31
236 311 3.555547 AGATTTGAAAACTTTTGCCGCAC 59.444 39.130 0.00 0.00 0.00 5.34
237 312 3.791245 AGATTTGAAAACTTTTGCCGCA 58.209 36.364 0.00 0.00 0.00 5.69
238 313 4.794248 AAGATTTGAAAACTTTTGCCGC 57.206 36.364 0.00 0.00 0.00 6.53
273 350 0.099436 GCCATCAAGATTGGTGCGTC 59.901 55.000 0.07 0.00 37.97 5.19
274 351 0.608856 TGCCATCAAGATTGGTGCGT 60.609 50.000 0.07 0.00 37.97 5.24
295 372 3.286694 AATGCATCCACCGCCCACT 62.287 57.895 0.00 0.00 0.00 4.00
365 442 2.621338 CTTTAAGATGCGTGCTCTCCA 58.379 47.619 0.00 0.00 0.00 3.86
369 446 1.530646 GCTGCTTTAAGATGCGTGCTC 60.531 52.381 0.00 0.00 0.00 4.26
391 468 1.333619 AGGCGGTTGCTTTAATATGCG 59.666 47.619 0.00 0.00 42.25 4.73
393 470 4.275689 TCATCAGGCGGTTGCTTTAATATG 59.724 41.667 0.00 0.00 42.25 1.78
455 532 8.103305 AGAGCTTAGATGTGACATCCTTAAAAA 58.897 33.333 21.05 6.46 0.00 1.94
456 533 7.624549 AGAGCTTAGATGTGACATCCTTAAAA 58.375 34.615 21.05 8.00 0.00 1.52
457 534 7.093333 TGAGAGCTTAGATGTGACATCCTTAAA 60.093 37.037 21.05 10.18 0.00 1.52
458 535 6.381133 TGAGAGCTTAGATGTGACATCCTTAA 59.619 38.462 21.05 13.11 0.00 1.85
459 536 5.893824 TGAGAGCTTAGATGTGACATCCTTA 59.106 40.000 21.05 6.22 0.00 2.69
460 537 4.713814 TGAGAGCTTAGATGTGACATCCTT 59.286 41.667 21.05 7.22 0.00 3.36
461 538 4.099266 GTGAGAGCTTAGATGTGACATCCT 59.901 45.833 21.05 11.37 0.00 3.24
462 539 4.142071 TGTGAGAGCTTAGATGTGACATCC 60.142 45.833 21.05 6.69 0.00 3.51
463 540 5.003692 TGTGAGAGCTTAGATGTGACATC 57.996 43.478 17.46 17.46 0.00 3.06
464 541 5.411831 TTGTGAGAGCTTAGATGTGACAT 57.588 39.130 0.00 0.00 0.00 3.06
465 542 4.871933 TTGTGAGAGCTTAGATGTGACA 57.128 40.909 0.00 0.00 0.00 3.58
466 543 9.703892 ATATATTTGTGAGAGCTTAGATGTGAC 57.296 33.333 0.00 0.00 0.00 3.67
475 552 9.511272 TGATGCATTATATATTTGTGAGAGCTT 57.489 29.630 0.00 0.00 0.00 3.74
476 553 9.511272 TTGATGCATTATATATTTGTGAGAGCT 57.489 29.630 0.00 0.00 0.00 4.09
477 554 9.552114 GTTGATGCATTATATATTTGTGAGAGC 57.448 33.333 0.00 0.00 0.00 4.09
536 613 2.225019 GCTCATGTCCACTCAGTTTGTG 59.775 50.000 0.00 0.00 35.39 3.33
537 614 2.105477 AGCTCATGTCCACTCAGTTTGT 59.895 45.455 0.00 0.00 0.00 2.83
538 615 2.775890 AGCTCATGTCCACTCAGTTTG 58.224 47.619 0.00 0.00 0.00 2.93
539 616 3.498774 AAGCTCATGTCCACTCAGTTT 57.501 42.857 0.00 0.00 0.00 2.66
540 617 3.834813 TCTAAGCTCATGTCCACTCAGTT 59.165 43.478 0.00 0.00 0.00 3.16
541 618 3.435275 TCTAAGCTCATGTCCACTCAGT 58.565 45.455 0.00 0.00 0.00 3.41
542 619 4.141981 ACATCTAAGCTCATGTCCACTCAG 60.142 45.833 0.00 0.00 0.00 3.35
543 620 3.771479 ACATCTAAGCTCATGTCCACTCA 59.229 43.478 0.00 0.00 0.00 3.41
544 621 4.118410 CACATCTAAGCTCATGTCCACTC 58.882 47.826 3.50 0.00 30.48 3.51
545 622 3.771479 TCACATCTAAGCTCATGTCCACT 59.229 43.478 3.50 0.00 30.48 4.00
546 623 3.868077 GTCACATCTAAGCTCATGTCCAC 59.132 47.826 3.50 1.47 30.48 4.02
547 624 3.515104 TGTCACATCTAAGCTCATGTCCA 59.485 43.478 3.50 2.18 30.48 4.02
548 625 4.128925 TGTCACATCTAAGCTCATGTCC 57.871 45.455 3.50 0.09 30.48 4.02
549 626 6.983307 AGTTATGTCACATCTAAGCTCATGTC 59.017 38.462 0.00 0.00 30.48 3.06
550 627 6.882656 AGTTATGTCACATCTAAGCTCATGT 58.117 36.000 0.00 0.00 33.29 3.21
551 628 8.923683 CATAGTTATGTCACATCTAAGCTCATG 58.076 37.037 0.00 0.00 0.00 3.07
552 629 8.646004 ACATAGTTATGTCACATCTAAGCTCAT 58.354 33.333 0.00 0.00 42.96 2.90
553 630 8.011844 ACATAGTTATGTCACATCTAAGCTCA 57.988 34.615 0.00 0.00 42.96 4.26
581 658 5.240623 GGTCTGTCTAGGACACATCTAGATG 59.759 48.000 27.63 27.63 43.25 2.90
582 659 5.381757 GGTCTGTCTAGGACACATCTAGAT 58.618 45.833 0.00 0.00 43.25 1.98
583 660 4.385421 GGGTCTGTCTAGGACACATCTAGA 60.385 50.000 0.00 0.00 37.67 2.43
584 661 3.886505 GGGTCTGTCTAGGACACATCTAG 59.113 52.174 0.00 0.00 37.67 2.43
585 662 3.268595 TGGGTCTGTCTAGGACACATCTA 59.731 47.826 0.00 0.00 41.46 1.98
586 663 2.043115 TGGGTCTGTCTAGGACACATCT 59.957 50.000 0.00 0.00 41.46 2.90
587 664 2.457598 TGGGTCTGTCTAGGACACATC 58.542 52.381 0.00 0.00 41.46 3.06
588 665 2.567615 GTTGGGTCTGTCTAGGACACAT 59.432 50.000 3.75 0.00 44.98 3.21
589 666 1.968493 GTTGGGTCTGTCTAGGACACA 59.032 52.381 0.00 0.00 44.14 3.72
590 667 1.968493 TGTTGGGTCTGTCTAGGACAC 59.032 52.381 0.00 0.00 37.67 3.67
591 668 2.367567 GTTGTTGGGTCTGTCTAGGACA 59.632 50.000 0.43 0.43 40.50 4.02
592 669 2.367567 TGTTGTTGGGTCTGTCTAGGAC 59.632 50.000 0.00 0.00 0.00 3.85
593 670 2.684943 TGTTGTTGGGTCTGTCTAGGA 58.315 47.619 0.00 0.00 0.00 2.94
594 671 3.485463 TTGTTGTTGGGTCTGTCTAGG 57.515 47.619 0.00 0.00 0.00 3.02
595 672 4.455877 GGATTTGTTGTTGGGTCTGTCTAG 59.544 45.833 0.00 0.00 0.00 2.43
596 673 4.104102 AGGATTTGTTGTTGGGTCTGTCTA 59.896 41.667 0.00 0.00 0.00 2.59
597 674 3.117512 AGGATTTGTTGTTGGGTCTGTCT 60.118 43.478 0.00 0.00 0.00 3.41
598 675 3.222603 AGGATTTGTTGTTGGGTCTGTC 58.777 45.455 0.00 0.00 0.00 3.51
599 676 3.312736 AGGATTTGTTGTTGGGTCTGT 57.687 42.857 0.00 0.00 0.00 3.41
600 677 4.670896 AAAGGATTTGTTGTTGGGTCTG 57.329 40.909 0.00 0.00 36.60 3.51
613 690 4.482990 TCCTGGAAGAAAGCAAAGGATTT 58.517 39.130 0.00 0.00 34.62 2.17
614 691 4.118168 TCCTGGAAGAAAGCAAAGGATT 57.882 40.909 0.00 0.00 34.07 3.01
615 692 3.814504 TCCTGGAAGAAAGCAAAGGAT 57.185 42.857 0.00 0.00 34.07 3.24
616 693 3.490348 CTTCCTGGAAGAAAGCAAAGGA 58.510 45.455 28.57 0.00 41.71 3.36
761 863 2.335712 GCAAAGGAAGCGACCCCAG 61.336 63.158 0.00 0.00 0.00 4.45
795 924 4.148825 CCTCCCTCCGGTCGCTTG 62.149 72.222 0.00 0.00 0.00 4.01
827 964 1.927895 CAGAGGAGGTGTTGTATCGC 58.072 55.000 0.00 0.00 0.00 4.58
828 965 1.799181 CGCAGAGGAGGTGTTGTATCG 60.799 57.143 0.00 0.00 0.00 2.92
830 967 0.108138 GCGCAGAGGAGGTGTTGTAT 60.108 55.000 0.30 0.00 0.00 2.29
831 968 1.292223 GCGCAGAGGAGGTGTTGTA 59.708 57.895 0.30 0.00 0.00 2.41
832 969 2.031163 GCGCAGAGGAGGTGTTGT 59.969 61.111 0.30 0.00 0.00 3.32
886 1023 4.610945 GATTGATAGCCGAAATGGTTTGG 58.389 43.478 0.00 0.00 40.91 3.28
893 1030 4.058817 GAGGAACGATTGATAGCCGAAAT 58.941 43.478 0.00 0.00 0.00 2.17
894 1031 3.454375 GAGGAACGATTGATAGCCGAAA 58.546 45.455 0.00 0.00 0.00 3.46
1112 1270 1.040339 AGATCAGACAGAGACGGGCC 61.040 60.000 0.00 0.00 0.00 5.80
1245 1415 2.047179 GCACAGTTCGGGGTCCTC 60.047 66.667 0.00 0.00 0.00 3.71
1246 1416 4.003788 CGCACAGTTCGGGGTCCT 62.004 66.667 0.00 0.00 0.00 3.85
1247 1417 1.952102 TATCGCACAGTTCGGGGTCC 61.952 60.000 0.00 0.00 0.00 4.46
1281 1451 3.060615 GTGGGGCTGCTGCTTCTG 61.061 66.667 15.64 0.00 39.59 3.02
1295 1465 4.974721 GGTGCCTGGTGGTGGTGG 62.975 72.222 0.00 0.00 35.27 4.61
1296 1466 3.850098 GAGGTGCCTGGTGGTGGTG 62.850 68.421 0.00 0.00 35.27 4.17
1297 1467 3.570212 GAGGTGCCTGGTGGTGGT 61.570 66.667 0.00 0.00 35.27 4.16
1298 1468 3.252284 AGAGGTGCCTGGTGGTGG 61.252 66.667 0.00 0.00 35.27 4.61
1299 1469 2.348998 GAGAGGTGCCTGGTGGTG 59.651 66.667 0.00 0.00 35.27 4.17
1300 1470 2.930562 GGAGAGGTGCCTGGTGGT 60.931 66.667 0.00 0.00 35.27 4.16
1323 1493 1.918957 AGGAAAATCCACAGAGAGGGG 59.081 52.381 0.00 0.00 44.73 4.79
1369 1541 3.145667 AGATAGATCAGGGTCAGGGGATT 59.854 47.826 0.00 0.00 0.00 3.01
1374 1546 3.831911 GAGGAAGATAGATCAGGGTCAGG 59.168 52.174 0.00 0.00 0.00 3.86
1375 1547 4.739793 AGAGGAAGATAGATCAGGGTCAG 58.260 47.826 0.00 0.00 0.00 3.51
1376 1548 4.823364 AGAGGAAGATAGATCAGGGTCA 57.177 45.455 0.00 0.00 0.00 4.02
1377 1549 4.262420 GCAAGAGGAAGATAGATCAGGGTC 60.262 50.000 0.00 0.00 0.00 4.46
1378 1550 3.645687 GCAAGAGGAAGATAGATCAGGGT 59.354 47.826 0.00 0.00 0.00 4.34
1380 1552 4.344679 ACTGCAAGAGGAAGATAGATCAGG 59.655 45.833 0.00 0.00 37.43 3.86
1381 1553 5.291178 CACTGCAAGAGGAAGATAGATCAG 58.709 45.833 0.00 0.00 37.43 2.90
1394 1588 0.397941 TTCTCCACCCACTGCAAGAG 59.602 55.000 0.00 0.00 37.43 2.85
1434 1638 1.134670 GGTAGGGCTCGCATATCATCC 60.135 57.143 0.00 0.00 0.00 3.51
1546 1750 5.278561 GGAGAGACGAACCTCGATTATGAAT 60.279 44.000 2.59 0.00 43.74 2.57
1594 1802 3.567585 AGAAGAAGCCAAGAAGCAGAAAC 59.432 43.478 0.00 0.00 34.23 2.78
1601 1809 2.816672 GTCCCAAGAAGAAGCCAAGAAG 59.183 50.000 0.00 0.00 0.00 2.85
1729 1963 2.028130 AGTGATGATCCTCACCTCGAC 58.972 52.381 22.80 2.48 45.41 4.20
1740 1974 3.556775 GCAAGCTCTCTCAAGTGATGATC 59.443 47.826 0.00 0.00 37.44 2.92
1764 1999 3.319122 ACCAATTCTTGACAAGACAAGGC 59.681 43.478 17.52 0.00 44.84 4.35
1796 2039 4.142513 GCAGAAGGACAAAGCTTAATGGAG 60.143 45.833 0.00 0.00 0.00 3.86
1882 2126 4.247380 CCGGCATCCTGCTCCTCC 62.247 72.222 0.00 0.00 44.28 4.30
1883 2127 4.925861 GCCGGCATCCTGCTCCTC 62.926 72.222 24.80 0.00 44.28 3.71
1956 2200 5.131642 TGGATGGAGCAGAAATCATAGTCTT 59.868 40.000 0.00 0.00 0.00 3.01
1992 2236 5.186797 CCAGATAGGAGGATTGATCAGGTAC 59.813 48.000 0.00 0.00 41.22 3.34
2002 2247 2.089696 AGGAAGGCCAGATAGGAGGATT 60.090 50.000 5.01 0.00 41.22 3.01
2014 2270 1.681229 ATACCCAAGAAGGAAGGCCA 58.319 50.000 5.01 0.00 41.22 5.36
2033 2289 9.074576 TCGAGAAACCAAGAAGCTGTATATATA 57.925 33.333 0.00 0.00 0.00 0.86
2060 2321 3.636679 TCTCATTCTCTGGTGAGGTAGG 58.363 50.000 2.90 0.00 41.64 3.18
2094 2355 3.616956 TCTCTTCGAACTGCCATGATT 57.383 42.857 0.00 0.00 0.00 2.57
2097 2358 3.388308 CCTATCTCTTCGAACTGCCATG 58.612 50.000 0.00 0.00 0.00 3.66
2121 2382 2.203209 GGGGCATCACCGGATCAC 60.203 66.667 9.46 0.00 40.62 3.06
2127 2388 2.822399 GAGTAGGGGGCATCACCG 59.178 66.667 0.00 0.00 40.62 4.94
2151 2412 2.857744 GCCCGACTATCCAGGACCG 61.858 68.421 0.00 0.00 0.00 4.79
2159 2420 3.120130 CGATACTTCTGAGCCCGACTATC 60.120 52.174 0.00 0.00 0.00 2.08
2160 2421 2.814919 CGATACTTCTGAGCCCGACTAT 59.185 50.000 0.00 0.00 0.00 2.12
2161 2422 2.219458 CGATACTTCTGAGCCCGACTA 58.781 52.381 0.00 0.00 0.00 2.59
2162 2423 1.025812 CGATACTTCTGAGCCCGACT 58.974 55.000 0.00 0.00 0.00 4.18
2166 2427 1.476891 TCACACGATACTTCTGAGCCC 59.523 52.381 0.00 0.00 0.00 5.19
2169 2430 3.444034 TCCCTTCACACGATACTTCTGAG 59.556 47.826 0.00 0.00 0.00 3.35
2170 2431 3.192844 GTCCCTTCACACGATACTTCTGA 59.807 47.826 0.00 0.00 0.00 3.27
2177 2438 2.100197 CAGGAGTCCCTTCACACGATA 58.900 52.381 5.25 0.00 42.02 2.92
2186 2447 2.286523 CCAGCGTCAGGAGTCCCTT 61.287 63.158 5.25 0.00 42.02 3.95
2203 2464 1.478105 GGTGTCCCATTTGAATGCTCC 59.522 52.381 0.00 0.00 35.08 4.70
2205 2466 1.176527 CGGTGTCCCATTTGAATGCT 58.823 50.000 0.00 0.00 35.08 3.79
2208 2469 2.288666 CGATCGGTGTCCCATTTGAAT 58.711 47.619 7.38 0.00 0.00 2.57
2209 2470 1.002659 ACGATCGGTGTCCCATTTGAA 59.997 47.619 20.98 0.00 0.00 2.69
2213 2474 0.175760 CTGACGATCGGTGTCCCATT 59.824 55.000 20.98 0.00 35.46 3.16
2214 2475 0.970937 ACTGACGATCGGTGTCCCAT 60.971 55.000 20.98 0.00 34.08 4.00
2315 2576 4.122776 GTGTCTATGATTTCGATGGTGCT 58.877 43.478 0.00 0.00 0.00 4.40
2316 2577 3.248602 GGTGTCTATGATTTCGATGGTGC 59.751 47.826 0.00 0.00 0.00 5.01
2344 2605 2.844146 CGTGCGACAAGACCGAAC 59.156 61.111 0.00 0.00 32.44 3.95
2345 2606 2.964438 AAGCGTGCGACAAGACCGAA 62.964 55.000 0.00 0.00 0.00 4.30
2346 2607 3.493830 AAGCGTGCGACAAGACCGA 62.494 57.895 0.00 0.00 0.00 4.69
2355 2616 0.436913 CGTTTGTATGAAGCGTGCGA 59.563 50.000 0.00 0.00 0.00 5.10
2366 2627 0.916086 TCCCCATGGAGCGTTTGTAT 59.084 50.000 15.22 0.00 35.03 2.29
2368 2629 0.039618 ATTCCCCATGGAGCGTTTGT 59.960 50.000 15.22 0.00 43.07 2.83
2386 2647 1.379576 GCTCAAGGAGGCAAGCCAT 60.380 57.895 14.40 0.00 38.92 4.40
2529 2794 3.225104 CACCCATAACCATCATCAAGGG 58.775 50.000 0.00 0.00 40.88 3.95
2530 2795 3.225104 CCACCCATAACCATCATCAAGG 58.775 50.000 0.00 0.00 0.00 3.61
2531 2796 3.902218 ACCACCCATAACCATCATCAAG 58.098 45.455 0.00 0.00 0.00 3.02
2532 2797 4.329638 AACCACCCATAACCATCATCAA 57.670 40.909 0.00 0.00 0.00 2.57
2533 2798 4.329638 AAACCACCCATAACCATCATCA 57.670 40.909 0.00 0.00 0.00 3.07
2534 2799 6.976934 ATAAAACCACCCATAACCATCATC 57.023 37.500 0.00 0.00 0.00 2.92
2535 2800 7.505585 CAGTATAAAACCACCCATAACCATCAT 59.494 37.037 0.00 0.00 0.00 2.45
2536 2801 6.831353 CAGTATAAAACCACCCATAACCATCA 59.169 38.462 0.00 0.00 0.00 3.07
2537 2802 7.057894 TCAGTATAAAACCACCCATAACCATC 58.942 38.462 0.00 0.00 0.00 3.51
2538 2803 6.975949 TCAGTATAAAACCACCCATAACCAT 58.024 36.000 0.00 0.00 0.00 3.55
2539 2804 6.390048 TCAGTATAAAACCACCCATAACCA 57.610 37.500 0.00 0.00 0.00 3.67
2540 2805 5.826208 CCTCAGTATAAAACCACCCATAACC 59.174 44.000 0.00 0.00 0.00 2.85
2541 2806 6.317893 CACCTCAGTATAAAACCACCCATAAC 59.682 42.308 0.00 0.00 0.00 1.89
2630 2898 1.809619 CGATGCCACTACCACACCG 60.810 63.158 0.00 0.00 0.00 4.94
2631 2899 0.739813 GTCGATGCCACTACCACACC 60.740 60.000 0.00 0.00 0.00 4.16
2686 2954 9.883293 TGAAGTAGGATCTTCCAAGATAATCTA 57.117 33.333 1.66 3.10 45.39 1.98
2687 2955 8.789767 TGAAGTAGGATCTTCCAAGATAATCT 57.210 34.615 1.66 3.91 45.39 2.40
2689 2957 7.882271 GCATGAAGTAGGATCTTCCAAGATAAT 59.118 37.037 0.00 0.00 45.39 1.28
2690 2958 7.071698 AGCATGAAGTAGGATCTTCCAAGATAA 59.928 37.037 0.00 0.00 45.39 1.75
2693 2961 4.718774 AGCATGAAGTAGGATCTTCCAAGA 59.281 41.667 0.00 0.00 41.96 3.02
2694 2962 5.033589 AGCATGAAGTAGGATCTTCCAAG 57.966 43.478 0.00 0.00 41.96 3.61
2695 2963 6.560003 TTAGCATGAAGTAGGATCTTCCAA 57.440 37.500 0.00 0.00 41.96 3.53
2696 2964 6.560003 TTTAGCATGAAGTAGGATCTTCCA 57.440 37.500 0.00 0.00 41.96 3.53
2697 2965 7.011857 CAGTTTTAGCATGAAGTAGGATCTTCC 59.988 40.741 0.00 0.00 41.96 3.46
2699 2967 7.335422 CACAGTTTTAGCATGAAGTAGGATCTT 59.665 37.037 0.00 0.00 0.00 2.40
2701 2969 6.457528 GCACAGTTTTAGCATGAAGTAGGATC 60.458 42.308 0.00 0.00 0.00 3.36
2702 2970 5.355350 GCACAGTTTTAGCATGAAGTAGGAT 59.645 40.000 0.00 0.00 0.00 3.24
2703 2971 4.695455 GCACAGTTTTAGCATGAAGTAGGA 59.305 41.667 0.00 0.00 0.00 2.94
2707 2975 4.916983 TTGCACAGTTTTAGCATGAAGT 57.083 36.364 0.00 0.00 38.19 3.01
2708 2976 5.389098 GCAATTGCACAGTTTTAGCATGAAG 60.389 40.000 25.36 0.00 41.59 3.02
2709 2977 4.448395 GCAATTGCACAGTTTTAGCATGAA 59.552 37.500 25.36 0.00 41.59 2.57
2711 2979 3.991773 AGCAATTGCACAGTTTTAGCATG 59.008 39.130 30.89 0.00 45.16 4.06
2712 2980 3.991773 CAGCAATTGCACAGTTTTAGCAT 59.008 39.130 30.89 3.64 45.16 3.79
2713 2981 3.067883 TCAGCAATTGCACAGTTTTAGCA 59.932 39.130 30.89 1.62 45.16 3.49
2714 2982 3.641648 TCAGCAATTGCACAGTTTTAGC 58.358 40.909 30.89 0.29 45.16 3.09
2715 2983 9.390795 GATATATCAGCAATTGCACAGTTTTAG 57.609 33.333 30.89 9.68 45.16 1.85
2716 2984 9.123902 AGATATATCAGCAATTGCACAGTTTTA 57.876 29.630 30.89 13.89 45.16 1.52
2717 2985 8.004087 AGATATATCAGCAATTGCACAGTTTT 57.996 30.769 30.89 11.59 45.16 2.43
2719 2987 7.578310 AAGATATATCAGCAATTGCACAGTT 57.422 32.000 30.89 16.95 45.16 3.16
2722 2990 6.040054 AGCAAAGATATATCAGCAATTGCACA 59.960 34.615 30.89 17.53 43.12 4.57
2723 2991 6.444633 AGCAAAGATATATCAGCAATTGCAC 58.555 36.000 30.89 11.66 43.12 4.57
2725 2993 6.128902 GCAAGCAAAGATATATCAGCAATTGC 60.129 38.462 23.05 23.05 41.52 3.56
2726 2994 7.145985 AGCAAGCAAAGATATATCAGCAATTG 58.854 34.615 15.08 15.06 0.00 2.32
2727 2995 7.286215 AGCAAGCAAAGATATATCAGCAATT 57.714 32.000 15.08 4.95 0.00 2.32
2728 2996 6.896021 AGCAAGCAAAGATATATCAGCAAT 57.104 33.333 15.08 6.46 0.00 3.56
2729 2997 6.704289 AAGCAAGCAAAGATATATCAGCAA 57.296 33.333 15.08 0.00 0.00 3.91
2730 2998 6.994496 AGTAAGCAAGCAAAGATATATCAGCA 59.006 34.615 15.08 0.00 0.00 4.41
2731 2999 7.432350 AGTAAGCAAGCAAAGATATATCAGC 57.568 36.000 15.08 14.29 0.00 4.26
2732 3000 8.834465 ACAAGTAAGCAAGCAAAGATATATCAG 58.166 33.333 15.08 5.63 0.00 2.90
2733 3001 8.615211 CACAAGTAAGCAAGCAAAGATATATCA 58.385 33.333 15.08 0.00 0.00 2.15
2734 3002 8.830580 TCACAAGTAAGCAAGCAAAGATATATC 58.169 33.333 4.42 4.42 0.00 1.63
2735 3003 8.616076 GTCACAAGTAAGCAAGCAAAGATATAT 58.384 33.333 0.00 0.00 0.00 0.86
2736 3004 7.201522 CGTCACAAGTAAGCAAGCAAAGATATA 60.202 37.037 0.00 0.00 0.00 0.86
2737 3005 6.402550 CGTCACAAGTAAGCAAGCAAAGATAT 60.403 38.462 0.00 0.00 0.00 1.63
2738 3006 5.107104 CGTCACAAGTAAGCAAGCAAAGATA 60.107 40.000 0.00 0.00 0.00 1.98
2739 3007 4.319766 CGTCACAAGTAAGCAAGCAAAGAT 60.320 41.667 0.00 0.00 0.00 2.40
2740 3008 3.002246 CGTCACAAGTAAGCAAGCAAAGA 59.998 43.478 0.00 0.00 0.00 2.52
2741 3009 3.291585 CGTCACAAGTAAGCAAGCAAAG 58.708 45.455 0.00 0.00 0.00 2.77
2749 3017 3.023591 GCCGGCGTCACAAGTAAGC 62.024 63.158 12.58 0.00 0.00 3.09
2757 3025 2.171489 GAAAGTTGAGCCGGCGTCAC 62.171 60.000 23.20 18.31 0.00 3.67
2761 3030 3.431725 GGGAAAGTTGAGCCGGCG 61.432 66.667 23.20 0.00 0.00 6.46
2780 3049 2.119391 TCCCCCGCCTGCATTTTT 59.881 55.556 0.00 0.00 0.00 1.94
2791 3060 3.649277 CTCGCTCACAAGTCCCCCG 62.649 68.421 0.00 0.00 0.00 5.73
2794 3063 1.004440 AAGCTCGCTCACAAGTCCC 60.004 57.895 0.00 0.00 0.00 4.46
2810 3079 1.244019 CCTCGGTTTGGCTTGGGAAG 61.244 60.000 0.00 0.00 0.00 3.46
2811 3080 1.228429 CCTCGGTTTGGCTTGGGAA 60.228 57.895 0.00 0.00 0.00 3.97
2812 3081 2.434331 CCTCGGTTTGGCTTGGGA 59.566 61.111 0.00 0.00 0.00 4.37
2813 3082 2.676471 CCCTCGGTTTGGCTTGGG 60.676 66.667 0.00 0.00 0.00 4.12
2848 3117 3.575805 AGAAGTGGCATTGGGAAAAAGA 58.424 40.909 0.00 0.00 0.00 2.52
2865 3134 7.869429 AGAATAAAAGCAATTGACCACAAGAAG 59.131 33.333 10.34 0.00 39.46 2.85
2922 3192 7.584122 ACGTTTGTAGGTATCATCTCACTAT 57.416 36.000 0.00 0.00 0.00 2.12
2957 4009 5.724328 TCTTGCTGGAACTAGTAACTCATG 58.276 41.667 0.00 0.00 0.00 3.07
2967 4019 9.515226 AACTACAAATTAATCTTGCTGGAACTA 57.485 29.630 9.08 0.00 0.00 2.24
2978 4030 6.719370 TGCACTGGGAAACTACAAATTAATCT 59.281 34.615 0.00 0.00 0.00 2.40
2998 4050 6.211184 TCACATTCCAAAATATTCCTTGCACT 59.789 34.615 0.00 0.00 0.00 4.40
2999 4051 6.397272 TCACATTCCAAAATATTCCTTGCAC 58.603 36.000 0.00 0.00 0.00 4.57
3000 4052 6.351202 CCTCACATTCCAAAATATTCCTTGCA 60.351 38.462 0.00 0.00 0.00 4.08
3001 4053 6.044682 CCTCACATTCCAAAATATTCCTTGC 58.955 40.000 0.00 0.00 0.00 4.01
3002 4054 6.407299 CCCCTCACATTCCAAAATATTCCTTG 60.407 42.308 0.00 0.00 0.00 3.61
3169 4226 0.988145 TCGAGGGGCAATCCATTCCT 60.988 55.000 0.00 0.00 37.22 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.