Multiple sequence alignment - TraesCS7D01G088800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G088800 chr7D 100.000 2604 0 0 1 2604 53710008 53712611 0.000000e+00 4809.0
1 TraesCS7D01G088800 chr7D 86.219 849 60 18 778 1609 53637654 53638462 0.000000e+00 867.0
2 TraesCS7D01G088800 chr7D 89.524 210 16 3 1975 2178 53705255 53705464 7.150000e-66 261.0
3 TraesCS7D01G088800 chr7D 90.270 185 13 2 1981 2160 53606556 53606740 1.200000e-58 237.0
4 TraesCS7D01G088800 chr7D 90.055 181 12 3 1975 2149 53530226 53530406 2.020000e-56 230.0
5 TraesCS7D01G088800 chr7D 87.255 204 18 5 1975 2172 53565285 53565486 2.610000e-55 226.0
6 TraesCS7D01G088800 chr7D 92.908 141 10 0 1799 1939 53577810 53577950 3.400000e-49 206.0
7 TraesCS7D01G088800 chr7D 89.506 162 17 0 1816 1977 53634131 53634292 3.400000e-49 206.0
8 TraesCS7D01G088800 chr7D 86.170 188 26 0 1363 1550 53524942 53525129 1.220000e-48 204.0
9 TraesCS7D01G088800 chr7D 86.243 189 24 2 1363 1550 53530186 53530373 1.220000e-48 204.0
10 TraesCS7D01G088800 chr7D 86.170 188 26 0 1363 1550 53700207 53700394 1.220000e-48 204.0
11 TraesCS7D01G088800 chr7D 89.308 159 17 0 1817 1975 53565058 53565216 1.580000e-47 200.0
12 TraesCS7D01G088800 chr7D 88.415 164 15 4 1816 1977 53606321 53606482 7.350000e-46 195.0
13 TraesCS7D01G088800 chr7D 85.106 188 28 0 1363 1550 53539607 53539794 2.640000e-45 193.0
14 TraesCS7D01G088800 chr7D 85.635 181 15 6 574 754 53637488 53637657 2.060000e-41 180.0
15 TraesCS7D01G088800 chr7D 91.597 119 10 0 1817 1935 53529990 53530108 5.770000e-37 165.0
16 TraesCS7D01G088800 chr7D 82.353 187 21 6 1799 1977 53574680 53574862 4.490000e-33 152.0
17 TraesCS7D01G088800 chr7D 90.000 100 10 0 992 1091 46965670 46965769 2.100000e-26 130.0
18 TraesCS7D01G088800 chr7D 79.221 154 23 6 2451 2597 53631891 53632042 5.930000e-17 99.0
19 TraesCS7D01G088800 chr7D 94.118 51 3 0 2280 2330 53631626 53631676 7.730000e-11 78.7
20 TraesCS7D01G088800 chr7D 95.000 40 2 0 2235 2274 53634638 53634677 2.160000e-06 63.9
21 TraesCS7D01G088800 chr7A 85.012 1241 111 42 581 1800 57156384 57157570 0.000000e+00 1192.0
22 TraesCS7D01G088800 chr7A 83.240 1247 86 45 574 1792 57095600 57096751 0.000000e+00 1031.0
23 TraesCS7D01G088800 chr7A 96.861 223 4 3 2384 2604 57185489 57185710 1.140000e-98 370.0
24 TraesCS7D01G088800 chr7A 86.017 236 24 7 796 1023 57130592 57130826 7.200000e-61 244.0
25 TraesCS7D01G088800 chr7A 87.805 205 23 1 1981 2183 56422099 56422303 3.350000e-59 239.0
26 TraesCS7D01G088800 chr7A 87.624 202 20 4 1976 2172 56241047 56241248 2.020000e-56 230.0
27 TraesCS7D01G088800 chr7A 87.940 199 16 4 1975 2165 56739030 56739228 7.250000e-56 228.0
28 TraesCS7D01G088800 chr7A 97.674 129 3 0 1799 1927 57157622 57157750 3.370000e-54 222.0
29 TraesCS7D01G088800 chr7A 92.308 156 10 2 1797 1950 56658209 56658364 1.210000e-53 220.0
30 TraesCS7D01G088800 chr7A 90.850 153 13 1 1799 1950 56430960 56431112 1.220000e-48 204.0
31 TraesCS7D01G088800 chr7A 85.263 190 24 3 1363 1550 55930769 55930956 2.640000e-45 193.0
32 TraesCS7D01G088800 chr7A 95.192 104 4 1 2132 2235 57185027 57185129 2.070000e-36 163.0
33 TraesCS7D01G088800 chr7A 98.529 68 1 0 2261 2328 57185424 57185491 1.270000e-23 121.0
34 TraesCS7D01G088800 chr4A 84.789 1065 84 29 766 1794 668351630 668352652 0.000000e+00 998.0
35 TraesCS7D01G088800 chr4A 90.863 197 16 1 1981 2175 668285533 668285729 1.990000e-66 263.0
36 TraesCS7D01G088800 chr4A 86.076 237 24 7 1975 2206 668323963 668324195 2.000000e-61 246.0
37 TraesCS7D01G088800 chr4A 87.234 188 22 2 1363 1549 668285486 668285672 2.030000e-51 213.0
38 TraesCS7D01G088800 chr4A 87.363 182 14 6 588 761 668373028 668373208 1.580000e-47 200.0
39 TraesCS7D01G088800 chr4A 88.462 156 18 0 1822 1977 668319242 668319397 3.420000e-44 189.0
40 TraesCS7D01G088800 chr4A 88.312 154 16 1 1799 1950 668323722 668323875 1.590000e-42 183.0
41 TraesCS7D01G088800 chr4A 90.226 133 8 1 780 907 668373193 668373325 4.460000e-38 169.0
42 TraesCS7D01G088800 chr4A 86.667 135 13 4 588 717 668351485 668351619 7.510000e-31 145.0
43 TraesCS7D01G088800 chr4A 85.088 114 13 2 2221 2330 668359431 668359544 2.120000e-21 113.0
44 TraesCS7D01G088800 chr4A 95.455 44 2 0 2554 2597 668324827 668324870 1.290000e-08 71.3
45 TraesCS7D01G088800 chr4A 90.000 50 5 0 1216 1265 668306336 668306385 6.020000e-07 65.8
46 TraesCS7D01G088800 chr4A 90.000 50 5 0 1216 1265 668323803 668323852 6.020000e-07 65.8
47 TraesCS7D01G088800 chr3A 82.907 743 77 26 884 1621 639620001 639620698 7.910000e-175 623.0
48 TraesCS7D01G088800 chr3A 96.269 134 4 1 1799 1932 639628286 639628418 4.360000e-53 219.0
49 TraesCS7D01G088800 chr3A 85.311 177 9 10 1629 1794 639628047 639628217 1.600000e-37 167.0
50 TraesCS7D01G088800 chr3A 80.165 121 7 8 720 840 639619896 639619999 9.990000e-10 75.0
51 TraesCS7D01G088800 chr5D 95.170 352 15 2 221 571 317591690 317592040 2.930000e-154 555.0
52 TraesCS7D01G088800 chr5D 95.238 63 2 1 2323 2385 495749404 495749343 5.930000e-17 99.0
53 TraesCS7D01G088800 chr3D 93.315 359 21 3 219 575 36547652 36548009 6.380000e-146 527.0
54 TraesCS7D01G088800 chr3D 92.694 219 16 0 1330 1548 500110096 500110314 1.500000e-82 316.0
55 TraesCS7D01G088800 chr3D 82.432 296 37 5 884 1172 500109745 500110032 7.200000e-61 244.0
56 TraesCS7D01G088800 chr3B 92.416 356 23 4 221 573 665479199 665479553 2.990000e-139 505.0
57 TraesCS7D01G088800 chr3B 91.317 357 30 1 219 575 154248899 154249254 1.080000e-133 486.0
58 TraesCS7D01G088800 chr3B 78.862 369 46 23 221 576 747334799 747334450 1.210000e-53 220.0
59 TraesCS7D01G088800 chr3B 82.684 231 30 10 221 444 115387169 115386942 2.040000e-46 196.0
60 TraesCS7D01G088800 chr3B 93.548 62 0 1 2328 2385 806419280 806419341 3.570000e-14 89.8
61 TraesCS7D01G088800 chr5A 91.760 267 20 2 307 572 531617086 531617351 1.140000e-98 370.0
62 TraesCS7D01G088800 chr5A 96.842 95 3 0 221 315 531616781 531616875 2.680000e-35 159.0
63 TraesCS7D01G088800 chr5A 93.220 59 3 1 2329 2386 35803797 35803855 4.620000e-13 86.1
64 TraesCS7D01G088800 chr5A 90.476 63 3 3 2325 2386 709759387 709759447 2.150000e-11 80.5
65 TraesCS7D01G088800 chr1B 83.799 358 49 9 221 573 26832590 26832237 5.370000e-87 331.0
66 TraesCS7D01G088800 chr2D 81.768 362 45 10 217 575 536909588 536909245 1.530000e-72 283.0
67 TraesCS7D01G088800 chr2D 94.915 59 3 0 2327 2385 582301428 582301486 2.760000e-15 93.5
68 TraesCS7D01G088800 chr1A 87.143 210 15 2 221 430 463494583 463494780 7.250000e-56 228.0
69 TraesCS7D01G088800 chrUn 94.118 119 7 0 1859 1977 402758426 402758544 5.720000e-42 182.0
70 TraesCS7D01G088800 chrUn 94.118 119 7 0 1859 1977 427401955 427402073 5.720000e-42 182.0
71 TraesCS7D01G088800 chr5B 96.721 61 1 1 2329 2389 613085272 613085331 1.650000e-17 100.0
72 TraesCS7D01G088800 chr2B 94.828 58 3 0 2328 2385 761990775 761990718 9.920000e-15 91.6
73 TraesCS7D01G088800 chr6A 94.828 58 2 1 2329 2386 94211570 94211514 3.570000e-14 89.8
74 TraesCS7D01G088800 chr2A 94.737 57 3 0 2329 2385 240480256 240480312 3.570000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G088800 chr7D 53710008 53712611 2603 False 4809.0 4809 100.000000 1 2604 1 chr7D.!!$F6 2603
1 TraesCS7D01G088800 chr7D 53631626 53638462 6836 False 249.1 867 88.283167 574 2597 6 chr7D.!!$F11 2023
2 TraesCS7D01G088800 chr7A 57095600 57096751 1151 False 1031.0 1031 83.240000 574 1792 1 chr7A.!!$F7 1218
3 TraesCS7D01G088800 chr7A 57156384 57157750 1366 False 707.0 1192 91.343000 581 1927 2 chr7A.!!$F9 1346
4 TraesCS7D01G088800 chr7A 57185027 57185710 683 False 218.0 370 96.860667 2132 2604 3 chr7A.!!$F10 472
5 TraesCS7D01G088800 chr4A 668351485 668352652 1167 False 571.5 998 85.728000 588 1794 2 chr4A.!!$F6 1206
6 TraesCS7D01G088800 chr3A 639619896 639620698 802 False 349.0 623 81.536000 720 1621 2 chr3A.!!$F1 901
7 TraesCS7D01G088800 chr3D 500109745 500110314 569 False 280.0 316 87.563000 884 1548 2 chr3D.!!$F2 664
8 TraesCS7D01G088800 chr5A 531616781 531617351 570 False 264.5 370 94.301000 221 572 2 chr5A.!!$F3 351

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
78 79 0.032952 ACGTAAGAAGTGCCGAAGCA 59.967 50.0 0.0 0.0 45.28 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1971 7471 0.108585 CCGCTGGGGTTATGTGCTAT 59.891 55.0 1.98 0.0 0.0 2.97 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.698238 TGAGGGTCTGGGTTGAATGG 59.302 55.000 0.00 0.00 0.00 3.16
20 21 0.991920 GAGGGTCTGGGTTGAATGGA 59.008 55.000 0.00 0.00 0.00 3.41
21 22 0.995024 AGGGTCTGGGTTGAATGGAG 59.005 55.000 0.00 0.00 0.00 3.86
25 26 2.489073 GGTCTGGGTTGAATGGAGTGTT 60.489 50.000 0.00 0.00 0.00 3.32
26 27 2.554032 GTCTGGGTTGAATGGAGTGTTG 59.446 50.000 0.00 0.00 0.00 3.33
27 28 2.174639 TCTGGGTTGAATGGAGTGTTGT 59.825 45.455 0.00 0.00 0.00 3.32
28 29 3.392947 TCTGGGTTGAATGGAGTGTTGTA 59.607 43.478 0.00 0.00 0.00 2.41
30 31 4.078537 TGGGTTGAATGGAGTGTTGTATG 58.921 43.478 0.00 0.00 0.00 2.39
32 33 3.505680 GGTTGAATGGAGTGTTGTATGCA 59.494 43.478 0.00 0.00 0.00 3.96
44 45 1.948104 TGTATGCAACATCGGTAGGC 58.052 50.000 0.00 0.00 31.43 3.93
45 46 1.226746 GTATGCAACATCGGTAGGCC 58.773 55.000 0.00 0.00 0.00 5.19
46 47 0.107831 TATGCAACATCGGTAGGCCC 59.892 55.000 0.00 0.00 0.00 5.80
48 49 1.819632 GCAACATCGGTAGGCCCAG 60.820 63.158 0.00 0.00 0.00 4.45
49 50 1.904771 CAACATCGGTAGGCCCAGA 59.095 57.895 0.00 0.00 0.00 3.86
50 51 0.462047 CAACATCGGTAGGCCCAGAC 60.462 60.000 0.00 0.00 0.00 3.51
51 52 1.623542 AACATCGGTAGGCCCAGACC 61.624 60.000 0.00 3.70 0.00 3.85
52 53 2.063979 CATCGGTAGGCCCAGACCA 61.064 63.158 16.99 6.74 35.26 4.02
53 54 1.762460 ATCGGTAGGCCCAGACCAG 60.762 63.158 16.99 10.69 35.26 4.00
55 56 1.987855 CGGTAGGCCCAGACCAGAA 60.988 63.158 16.99 0.00 35.26 3.02
56 57 1.550130 CGGTAGGCCCAGACCAGAAA 61.550 60.000 16.99 0.00 35.26 2.52
58 59 1.074889 GGTAGGCCCAGACCAGAAAAA 59.925 52.381 13.06 0.00 35.65 1.94
76 77 3.872560 AAAACGTAAGAAGTGCCGAAG 57.127 42.857 0.00 0.00 43.62 3.79
77 78 1.145803 AACGTAAGAAGTGCCGAAGC 58.854 50.000 0.00 0.00 43.62 3.86
78 79 0.032952 ACGTAAGAAGTGCCGAAGCA 59.967 50.000 0.00 0.00 45.28 3.91
86 87 3.731136 TGCCGAAGCAGTTCACAC 58.269 55.556 0.00 0.00 46.52 3.82
87 88 1.153269 TGCCGAAGCAGTTCACACA 60.153 52.632 0.00 0.00 46.52 3.72
88 89 0.534877 TGCCGAAGCAGTTCACACAT 60.535 50.000 0.00 0.00 46.52 3.21
89 90 0.166814 GCCGAAGCAGTTCACACATC 59.833 55.000 0.00 0.00 39.53 3.06
91 92 1.195448 CCGAAGCAGTTCACACATCAC 59.805 52.381 0.00 0.00 32.36 3.06
93 94 2.348872 CGAAGCAGTTCACACATCACAC 60.349 50.000 0.00 0.00 32.36 3.82
94 95 2.330440 AGCAGTTCACACATCACACA 57.670 45.000 0.00 0.00 0.00 3.72
95 96 2.216046 AGCAGTTCACACATCACACAG 58.784 47.619 0.00 0.00 0.00 3.66
96 97 2.158914 AGCAGTTCACACATCACACAGA 60.159 45.455 0.00 0.00 0.00 3.41
97 98 2.222678 GCAGTTCACACATCACACAGAG 59.777 50.000 0.00 0.00 0.00 3.35
100 101 4.210746 CAGTTCACACATCACACAGAGAAG 59.789 45.833 0.00 0.00 0.00 2.85
103 104 1.271054 ACACATCACACAGAGAAGGGC 60.271 52.381 0.00 0.00 0.00 5.19
104 105 1.002888 CACATCACACAGAGAAGGGCT 59.997 52.381 0.00 0.00 0.00 5.19
106 107 2.499289 ACATCACACAGAGAAGGGCTAG 59.501 50.000 0.00 0.00 0.00 3.42
107 108 2.310779 TCACACAGAGAAGGGCTAGT 57.689 50.000 0.00 0.00 0.00 2.57
108 109 2.171840 TCACACAGAGAAGGGCTAGTC 58.828 52.381 0.00 0.00 0.00 2.59
109 110 1.205893 CACACAGAGAAGGGCTAGTCC 59.794 57.143 4.79 4.79 0.00 3.85
110 111 0.457851 CACAGAGAAGGGCTAGTCCG 59.542 60.000 7.97 0.00 34.94 4.79
111 112 0.684805 ACAGAGAAGGGCTAGTCCGG 60.685 60.000 7.97 0.00 34.94 5.14
112 113 1.758906 AGAGAAGGGCTAGTCCGGC 60.759 63.158 7.97 3.92 34.94 6.13
135 136 4.722700 AGCAGATGCCGCCGGTTT 62.723 61.111 4.45 0.00 43.38 3.27
136 137 4.179579 GCAGATGCCGCCGGTTTC 62.180 66.667 4.45 1.78 34.31 2.78
137 138 3.864686 CAGATGCCGCCGGTTTCG 61.865 66.667 4.45 0.00 0.00 3.46
148 149 2.253154 GGTTTCGCCCGAAAACGG 59.747 61.111 16.31 0.00 44.40 4.44
180 181 1.429021 CCGACCGACCGACGATTTA 59.571 57.895 0.00 0.00 45.77 1.40
181 182 0.863119 CCGACCGACCGACGATTTAC 60.863 60.000 0.00 0.00 45.77 2.01
184 185 0.097674 ACCGACCGACGATTTACGAG 59.902 55.000 0.00 0.00 45.77 4.18
185 186 0.097674 CCGACCGACGATTTACGAGT 59.902 55.000 0.00 0.00 45.77 4.18
186 187 1.177668 CGACCGACGATTTACGAGTG 58.822 55.000 0.00 0.00 45.77 3.51
187 188 1.201954 CGACCGACGATTTACGAGTGA 60.202 52.381 0.00 0.00 45.77 3.41
188 189 2.725759 CGACCGACGATTTACGAGTGAA 60.726 50.000 0.00 0.00 45.77 3.18
190 191 2.982470 ACCGACGATTTACGAGTGAAAC 59.018 45.455 0.00 0.00 45.77 2.78
201 202 3.670377 GTGAAACTGGCGGCACCC 61.670 66.667 7.97 0.00 37.83 4.61
211 212 2.050442 CGGCACCCGCTTTGTTTC 60.050 61.111 0.00 0.00 41.17 2.78
212 213 2.050442 GGCACCCGCTTTGTTTCG 60.050 61.111 0.00 0.00 38.60 3.46
213 214 2.719354 GCACCCGCTTTGTTTCGT 59.281 55.556 0.00 0.00 34.30 3.85
214 215 1.065109 GCACCCGCTTTGTTTCGTT 59.935 52.632 0.00 0.00 34.30 3.85
215 216 0.526739 GCACCCGCTTTGTTTCGTTT 60.527 50.000 0.00 0.00 34.30 3.60
216 217 1.915952 CACCCGCTTTGTTTCGTTTT 58.084 45.000 0.00 0.00 0.00 2.43
217 218 2.263945 CACCCGCTTTGTTTCGTTTTT 58.736 42.857 0.00 0.00 0.00 1.94
337 557 1.194121 TGTAGCCTGCAGAAGAGCCA 61.194 55.000 17.39 1.41 0.00 4.75
340 560 2.669849 CCTGCAGAAGAGCCAGCT 59.330 61.111 17.39 0.00 0.00 4.24
375 595 7.484959 GTGAAAAGCGAGAGAAAGAAAGAAAAA 59.515 33.333 0.00 0.00 0.00 1.94
377 597 5.681337 AGCGAGAGAAAGAAAGAAAAAGG 57.319 39.130 0.00 0.00 0.00 3.11
423 643 6.389869 AGGAGAGAGATAGAGAGAGGAAGAAA 59.610 42.308 0.00 0.00 0.00 2.52
426 646 9.136323 GAGAGAGATAGAGAGAGGAAGAAAAAT 57.864 37.037 0.00 0.00 0.00 1.82
429 649 9.936329 AGAGATAGAGAGAGGAAGAAAAATACT 57.064 33.333 0.00 0.00 0.00 2.12
487 708 2.677228 CTCCGGTTGGCCAGGATT 59.323 61.111 12.37 0.00 37.04 3.01
511 732 5.855740 TTTCAAAACGGTGGTTTCCTTAT 57.144 34.783 0.00 0.00 45.35 1.73
512 733 5.855740 TTCAAAACGGTGGTTTCCTTATT 57.144 34.783 0.00 0.00 45.35 1.40
543 764 6.869206 TTAGTTTAAGAGGTGAGGCACTAT 57.131 37.500 0.00 0.00 41.55 2.12
572 793 2.674754 CCCCGTTGTACATGCCCT 59.325 61.111 0.00 0.00 0.00 5.19
573 794 1.001393 CCCCGTTGTACATGCCCTT 60.001 57.895 0.00 0.00 0.00 3.95
574 795 0.253610 CCCCGTTGTACATGCCCTTA 59.746 55.000 0.00 0.00 0.00 2.69
575 796 1.133915 CCCCGTTGTACATGCCCTTAT 60.134 52.381 0.00 0.00 0.00 1.73
576 797 2.105134 CCCCGTTGTACATGCCCTTATA 59.895 50.000 0.00 0.00 0.00 0.98
577 798 3.244770 CCCCGTTGTACATGCCCTTATAT 60.245 47.826 0.00 0.00 0.00 0.86
578 799 3.751175 CCCGTTGTACATGCCCTTATATG 59.249 47.826 0.00 0.00 0.00 1.78
579 800 4.504165 CCCGTTGTACATGCCCTTATATGA 60.504 45.833 0.00 0.00 0.00 2.15
585 5873 6.340522 TGTACATGCCCTTATATGATGATCG 58.659 40.000 0.00 0.00 0.00 3.69
615 5903 6.560253 CACTGTTGTGCCTAACTTTAGATT 57.440 37.500 0.00 0.00 37.38 2.40
640 5928 2.935201 CGAGATCTCCCTTTTCTTGCTG 59.065 50.000 17.13 0.00 0.00 4.41
658 5946 2.816337 GCTGGCTTTAGTTTGGTGGGTA 60.816 50.000 0.00 0.00 0.00 3.69
659 5947 3.492337 CTGGCTTTAGTTTGGTGGGTAA 58.508 45.455 0.00 0.00 0.00 2.85
660 5948 3.892588 CTGGCTTTAGTTTGGTGGGTAAA 59.107 43.478 0.00 0.00 0.00 2.01
661 5949 3.892588 TGGCTTTAGTTTGGTGGGTAAAG 59.107 43.478 0.00 0.00 36.14 1.85
687 5975 4.589374 AGAAAGAAAGAAAGACGAGGGAGA 59.411 41.667 0.00 0.00 0.00 3.71
690 5978 3.641906 AGAAAGAAAGACGAGGGAGAACA 59.358 43.478 0.00 0.00 0.00 3.18
701 6002 4.695560 GAGAACACCCTCCAACGG 57.304 61.111 0.00 0.00 0.00 4.44
743 6047 4.396357 TGGATTCCCATACCACAGTTTT 57.604 40.909 0.00 0.00 37.58 2.43
744 6048 4.085733 TGGATTCCCATACCACAGTTTTG 58.914 43.478 0.00 0.00 37.58 2.44
745 6049 3.447229 GGATTCCCATACCACAGTTTTGG 59.553 47.826 0.00 0.00 43.04 3.28
746 6050 3.885976 TTCCCATACCACAGTTTTGGA 57.114 42.857 0.00 0.00 39.24 3.53
747 6051 4.396357 TTCCCATACCACAGTTTTGGAT 57.604 40.909 0.00 0.00 39.24 3.41
748 6052 5.522315 TTCCCATACCACAGTTTTGGATA 57.478 39.130 0.00 0.00 39.24 2.59
749 6053 5.522315 TCCCATACCACAGTTTTGGATAA 57.478 39.130 0.00 0.00 39.24 1.75
750 6054 5.258051 TCCCATACCACAGTTTTGGATAAC 58.742 41.667 0.00 0.00 39.24 1.89
751 6055 4.401202 CCCATACCACAGTTTTGGATAACC 59.599 45.833 0.00 0.00 39.24 2.85
752 6056 4.095782 CCATACCACAGTTTTGGATAACCG 59.904 45.833 0.00 0.00 39.24 4.44
753 6057 2.510613 ACCACAGTTTTGGATAACCGG 58.489 47.619 0.00 0.00 39.24 5.28
754 6058 1.201414 CCACAGTTTTGGATAACCGGC 59.799 52.381 0.00 0.00 39.24 6.13
755 6059 1.201414 CACAGTTTTGGATAACCGGCC 59.799 52.381 0.00 0.00 39.42 6.13
756 6060 0.815095 CAGTTTTGGATAACCGGCCC 59.185 55.000 0.00 0.00 39.42 5.80
757 6061 0.323999 AGTTTTGGATAACCGGCCCC 60.324 55.000 0.00 0.00 39.42 5.80
758 6062 0.323999 GTTTTGGATAACCGGCCCCT 60.324 55.000 0.00 0.00 39.42 4.79
759 6063 0.323908 TTTTGGATAACCGGCCCCTG 60.324 55.000 0.00 0.00 39.42 4.45
760 6064 2.847366 TTTGGATAACCGGCCCCTGC 62.847 60.000 0.00 0.00 39.42 4.85
761 6065 3.804329 GGATAACCGGCCCCTGCA 61.804 66.667 0.00 0.00 40.13 4.41
762 6066 2.274104 GATAACCGGCCCCTGCAA 59.726 61.111 0.00 0.00 40.13 4.08
763 6067 2.044352 ATAACCGGCCCCTGCAAC 60.044 61.111 0.00 0.00 40.13 4.17
764 6068 3.655350 ATAACCGGCCCCTGCAACC 62.655 63.158 0.00 0.00 40.13 3.77
776 6080 4.487412 GCAACCTGCATGCCGCTC 62.487 66.667 16.68 0.00 44.26 5.03
803 6136 3.357079 GTGCTCTGCCCACCAACG 61.357 66.667 0.00 0.00 0.00 4.10
858 6205 2.113139 AGAGCACCCACGGTTTGG 59.887 61.111 0.00 0.00 46.47 3.28
906 6259 5.067283 CACCTTTTTGCCCGCTATAAATACT 59.933 40.000 0.00 0.00 0.00 2.12
925 6278 1.827399 TTGGCTCAACTCCTCGTCCC 61.827 60.000 0.00 0.00 0.00 4.46
932 6285 4.194720 CTCCTCGTCCCGGAAGCG 62.195 72.222 0.73 4.22 0.00 4.68
985 6357 1.127701 GCTCGATCATCGCACTCTTC 58.872 55.000 0.80 0.00 40.21 2.87
1000 6372 0.315886 TCTTCGTGCTGAGCCGTTTA 59.684 50.000 13.39 2.76 0.00 2.01
1118 6496 2.771943 CCTAGTAACCAGCAGGATCCAA 59.228 50.000 15.82 0.00 38.69 3.53
1129 6507 3.117963 AGCAGGATCCAATTCTTCAGAGG 60.118 47.826 15.82 0.00 0.00 3.69
1150 6528 1.070758 TCAGTTCAGTTCAGCCAGGTC 59.929 52.381 0.00 0.00 0.00 3.85
1173 6551 5.579904 TCGTGTACTGATAGTCTGACACTAC 59.420 44.000 10.88 0.00 40.60 2.73
1174 6552 5.350640 CGTGTACTGATAGTCTGACACTACA 59.649 44.000 10.88 4.08 40.60 2.74
1190 6575 6.922957 TGACACTACAAATGCATTTCTTTTCC 59.077 34.615 21.70 9.22 0.00 3.13
1205 6591 7.906199 TTTCTTTTCCTAATGTTTCCCAGAA 57.094 32.000 0.00 0.00 0.00 3.02
1285 6671 1.533033 TGAGCTCCTCCGTCCAACA 60.533 57.895 12.15 0.00 0.00 3.33
1305 6693 4.147321 ACAGGAGTTGCTGATTTTCATGT 58.853 39.130 7.68 0.00 0.00 3.21
1307 6695 5.948162 ACAGGAGTTGCTGATTTTCATGTAT 59.052 36.000 7.68 0.00 31.87 2.29
1308 6696 7.112122 ACAGGAGTTGCTGATTTTCATGTATA 58.888 34.615 7.68 0.00 31.87 1.47
1309 6697 7.611467 ACAGGAGTTGCTGATTTTCATGTATAA 59.389 33.333 7.68 0.00 31.87 0.98
1310 6698 8.127327 CAGGAGTTGCTGATTTTCATGTATAAG 58.873 37.037 0.00 0.00 0.00 1.73
1311 6699 7.284034 AGGAGTTGCTGATTTTCATGTATAAGG 59.716 37.037 0.00 0.00 0.00 2.69
1312 6700 7.283127 GGAGTTGCTGATTTTCATGTATAAGGA 59.717 37.037 0.00 0.00 0.00 3.36
1313 6701 8.579850 AGTTGCTGATTTTCATGTATAAGGAA 57.420 30.769 0.00 0.00 0.00 3.36
1314 6702 9.023962 AGTTGCTGATTTTCATGTATAAGGAAA 57.976 29.630 0.00 0.00 0.00 3.13
1315 6703 9.294030 GTTGCTGATTTTCATGTATAAGGAAAG 57.706 33.333 0.00 0.00 32.68 2.62
1316 6704 7.483307 TGCTGATTTTCATGTATAAGGAAAGC 58.517 34.615 0.00 0.00 32.68 3.51
1317 6705 7.122501 TGCTGATTTTCATGTATAAGGAAAGCA 59.877 33.333 0.00 0.00 32.68 3.91
1318 6706 7.975616 GCTGATTTTCATGTATAAGGAAAGCAA 59.024 33.333 0.00 0.00 32.68 3.91
1319 6707 9.512435 CTGATTTTCATGTATAAGGAAAGCAAG 57.488 33.333 0.00 0.00 32.68 4.01
1320 6708 9.241919 TGATTTTCATGTATAAGGAAAGCAAGA 57.758 29.630 0.00 0.00 32.68 3.02
1321 6709 9.727627 GATTTTCATGTATAAGGAAAGCAAGAG 57.272 33.333 0.00 0.00 32.68 2.85
1322 6710 8.635765 TTTTCATGTATAAGGAAAGCAAGAGT 57.364 30.769 0.00 0.00 32.68 3.24
1323 6711 8.635765 TTTCATGTATAAGGAAAGCAAGAGTT 57.364 30.769 0.00 0.00 0.00 3.01
1324 6712 8.635765 TTCATGTATAAGGAAAGCAAGAGTTT 57.364 30.769 0.00 0.00 0.00 2.66
1325 6713 8.635765 TCATGTATAAGGAAAGCAAGAGTTTT 57.364 30.769 0.00 0.00 0.00 2.43
1326 6714 9.077885 TCATGTATAAGGAAAGCAAGAGTTTTT 57.922 29.630 0.00 0.00 0.00 1.94
1327 6715 9.346725 CATGTATAAGGAAAGCAAGAGTTTTTC 57.653 33.333 0.00 0.00 0.00 2.29
1328 6716 8.691661 TGTATAAGGAAAGCAAGAGTTTTTCT 57.308 30.769 0.00 0.00 35.54 2.52
1335 6725 6.036083 GGAAAGCAAGAGTTTTTCTTTTGTCC 59.964 38.462 0.00 0.00 43.68 4.02
1356 6746 4.513692 TCCGGTTTTCATAACTGAACTGTG 59.486 41.667 0.00 0.00 41.05 3.66
1390 6784 3.670637 GAGCGTGAGGATGCTGCCA 62.671 63.158 0.00 0.00 44.95 4.92
1471 6865 4.493747 GCCTACTTCGTCGCCGCT 62.494 66.667 0.00 0.00 0.00 5.52
1540 6934 1.472662 CCGACCACCTCAAGGACACT 61.473 60.000 2.30 0.00 38.94 3.55
1622 7016 6.162777 CCTTGAGCTAGTATTATCCTGCTTC 58.837 44.000 0.00 0.00 0.00 3.86
1631 7042 0.107703 TATCCTGCTTCTGCCGTTGG 60.108 55.000 0.00 0.00 38.71 3.77
1812 7312 5.005740 TCAGAAGTTCATTGCAGCTTATGT 58.994 37.500 5.50 0.00 33.49 2.29
1928 7428 3.136123 CTGCCGCAGTCCCCATTG 61.136 66.667 12.54 0.00 0.00 2.82
1929 7429 3.925630 CTGCCGCAGTCCCCATTGT 62.926 63.158 12.54 0.00 0.00 2.71
1930 7430 2.270850 GCCGCAGTCCCCATTGTA 59.729 61.111 0.00 0.00 0.00 2.41
1931 7431 1.377987 GCCGCAGTCCCCATTGTAA 60.378 57.895 0.00 0.00 0.00 2.41
1932 7432 1.376609 GCCGCAGTCCCCATTGTAAG 61.377 60.000 0.00 0.00 0.00 2.34
1933 7433 0.035439 CCGCAGTCCCCATTGTAAGT 60.035 55.000 0.00 0.00 0.00 2.24
1934 7434 1.208535 CCGCAGTCCCCATTGTAAGTA 59.791 52.381 0.00 0.00 0.00 2.24
1935 7435 2.550978 CGCAGTCCCCATTGTAAGTAG 58.449 52.381 0.00 0.00 0.00 2.57
1936 7436 2.289565 GCAGTCCCCATTGTAAGTAGC 58.710 52.381 0.00 0.00 0.00 3.58
1937 7437 2.919228 CAGTCCCCATTGTAAGTAGCC 58.081 52.381 0.00 0.00 0.00 3.93
1938 7438 2.238646 CAGTCCCCATTGTAAGTAGCCA 59.761 50.000 0.00 0.00 0.00 4.75
1939 7439 3.117888 CAGTCCCCATTGTAAGTAGCCAT 60.118 47.826 0.00 0.00 0.00 4.40
1940 7440 3.527665 AGTCCCCATTGTAAGTAGCCATT 59.472 43.478 0.00 0.00 0.00 3.16
1941 7441 3.883489 GTCCCCATTGTAAGTAGCCATTC 59.117 47.826 0.00 0.00 0.00 2.67
1942 7442 3.525609 TCCCCATTGTAAGTAGCCATTCA 59.474 43.478 0.00 0.00 0.00 2.57
1943 7443 3.885297 CCCCATTGTAAGTAGCCATTCAG 59.115 47.826 0.00 0.00 0.00 3.02
1944 7444 4.526970 CCCATTGTAAGTAGCCATTCAGT 58.473 43.478 0.00 0.00 0.00 3.41
1945 7445 4.949856 CCCATTGTAAGTAGCCATTCAGTT 59.050 41.667 0.00 0.00 0.00 3.16
1946 7446 5.066505 CCCATTGTAAGTAGCCATTCAGTTC 59.933 44.000 0.00 0.00 0.00 3.01
1947 7447 5.882557 CCATTGTAAGTAGCCATTCAGTTCT 59.117 40.000 0.00 0.00 0.00 3.01
1948 7448 6.375455 CCATTGTAAGTAGCCATTCAGTTCTT 59.625 38.462 0.00 0.00 0.00 2.52
1949 7449 7.414540 CCATTGTAAGTAGCCATTCAGTTCTTC 60.415 40.741 0.00 0.00 0.00 2.87
1950 7450 5.168569 TGTAAGTAGCCATTCAGTTCTTCG 58.831 41.667 0.00 0.00 0.00 3.79
1951 7451 4.537135 AAGTAGCCATTCAGTTCTTCGA 57.463 40.909 0.00 0.00 0.00 3.71
1952 7452 3.851098 AGTAGCCATTCAGTTCTTCGAC 58.149 45.455 0.00 0.00 0.00 4.20
1953 7453 1.714794 AGCCATTCAGTTCTTCGACG 58.285 50.000 0.00 0.00 0.00 5.12
1954 7454 1.272490 AGCCATTCAGTTCTTCGACGA 59.728 47.619 0.00 0.00 0.00 4.20
1955 7455 2.066262 GCCATTCAGTTCTTCGACGAA 58.934 47.619 10.34 10.34 0.00 3.85
1956 7456 2.478894 GCCATTCAGTTCTTCGACGAAA 59.521 45.455 12.03 0.31 0.00 3.46
1957 7457 3.125316 GCCATTCAGTTCTTCGACGAAAT 59.875 43.478 12.03 1.95 0.00 2.17
1958 7458 4.725169 GCCATTCAGTTCTTCGACGAAATC 60.725 45.833 12.03 5.17 0.00 2.17
1959 7459 4.201724 CCATTCAGTTCTTCGACGAAATCC 60.202 45.833 12.03 2.16 0.00 3.01
1960 7460 3.936372 TCAGTTCTTCGACGAAATCCT 57.064 42.857 12.03 4.44 0.00 3.24
1961 7461 4.252971 TCAGTTCTTCGACGAAATCCTT 57.747 40.909 12.03 0.00 0.00 3.36
1962 7462 3.987868 TCAGTTCTTCGACGAAATCCTTG 59.012 43.478 12.03 7.01 0.00 3.61
1963 7463 2.737252 AGTTCTTCGACGAAATCCTTGC 59.263 45.455 12.03 0.00 0.00 4.01
1964 7464 2.737252 GTTCTTCGACGAAATCCTTGCT 59.263 45.455 12.03 0.00 0.00 3.91
1965 7465 2.607187 TCTTCGACGAAATCCTTGCTC 58.393 47.619 12.03 0.00 0.00 4.26
1966 7466 1.321743 CTTCGACGAAATCCTTGCTCG 59.678 52.381 12.03 0.00 38.53 5.03
1967 7467 0.457853 TCGACGAAATCCTTGCTCGG 60.458 55.000 0.00 0.00 36.90 4.63
1968 7468 0.736325 CGACGAAATCCTTGCTCGGT 60.736 55.000 0.00 0.00 36.90 4.69
1969 7469 1.439679 GACGAAATCCTTGCTCGGTT 58.560 50.000 0.00 0.00 36.90 4.44
1970 7470 1.393883 GACGAAATCCTTGCTCGGTTC 59.606 52.381 0.00 0.00 36.90 3.62
1971 7471 1.270625 ACGAAATCCTTGCTCGGTTCA 60.271 47.619 0.00 0.00 36.90 3.18
1972 7472 2.009774 CGAAATCCTTGCTCGGTTCAT 58.990 47.619 0.00 0.00 0.00 2.57
1973 7473 3.194861 CGAAATCCTTGCTCGGTTCATA 58.805 45.455 0.00 0.00 0.00 2.15
1974 7474 3.246226 CGAAATCCTTGCTCGGTTCATAG 59.754 47.826 0.00 0.00 0.00 2.23
1975 7475 2.246719 ATCCTTGCTCGGTTCATAGC 57.753 50.000 0.00 0.00 39.25 2.97
1976 7476 0.901827 TCCTTGCTCGGTTCATAGCA 59.098 50.000 0.00 0.00 46.59 3.49
1981 7481 3.535280 TGCTCGGTTCATAGCACATAA 57.465 42.857 0.00 0.00 43.56 1.90
1982 7482 3.194861 TGCTCGGTTCATAGCACATAAC 58.805 45.455 0.00 0.00 43.56 1.89
1983 7483 2.544267 GCTCGGTTCATAGCACATAACC 59.456 50.000 0.00 0.00 38.63 2.85
1984 7484 3.131396 CTCGGTTCATAGCACATAACCC 58.869 50.000 0.00 0.00 38.52 4.11
1985 7485 2.158871 TCGGTTCATAGCACATAACCCC 60.159 50.000 0.00 0.00 38.52 4.95
1986 7486 2.420827 CGGTTCATAGCACATAACCCCA 60.421 50.000 0.00 0.00 38.52 4.96
1987 7487 3.214328 GGTTCATAGCACATAACCCCAG 58.786 50.000 0.00 0.00 36.24 4.45
1988 7488 2.618709 GTTCATAGCACATAACCCCAGC 59.381 50.000 0.00 0.00 0.00 4.85
1989 7489 1.202639 TCATAGCACATAACCCCAGCG 60.203 52.381 0.00 0.00 0.00 5.18
1990 7490 0.108585 ATAGCACATAACCCCAGCGG 59.891 55.000 0.00 0.00 37.81 5.52
2005 7505 4.923942 CGGGCAGGCGCTCATCAT 62.924 66.667 7.64 0.00 39.27 2.45
2006 7506 2.976903 GGGCAGGCGCTCATCATC 60.977 66.667 7.64 0.00 39.07 2.92
2007 7507 2.110627 GGCAGGCGCTCATCATCT 59.889 61.111 7.64 0.00 38.60 2.90
2008 7508 1.960250 GGCAGGCGCTCATCATCTC 60.960 63.158 7.64 0.00 38.60 2.75
2009 7509 1.960250 GCAGGCGCTCATCATCTCC 60.960 63.158 7.64 0.00 34.30 3.71
2010 7510 1.444672 CAGGCGCTCATCATCTCCA 59.555 57.895 7.64 0.00 0.00 3.86
2011 7511 0.879400 CAGGCGCTCATCATCTCCAC 60.879 60.000 7.64 0.00 0.00 4.02
2012 7512 1.953138 GGCGCTCATCATCTCCACG 60.953 63.158 7.64 0.00 0.00 4.94
2013 7513 1.953138 GCGCTCATCATCTCCACGG 60.953 63.158 0.00 0.00 0.00 4.94
2014 7514 1.439228 CGCTCATCATCTCCACGGT 59.561 57.895 0.00 0.00 0.00 4.83
2015 7515 0.596083 CGCTCATCATCTCCACGGTC 60.596 60.000 0.00 0.00 0.00 4.79
2016 7516 0.596083 GCTCATCATCTCCACGGTCG 60.596 60.000 0.00 0.00 0.00 4.79
2017 7517 0.596083 CTCATCATCTCCACGGTCGC 60.596 60.000 0.00 0.00 0.00 5.19
2018 7518 1.592669 CATCATCTCCACGGTCGCC 60.593 63.158 0.00 0.00 0.00 5.54
2034 7534 2.421739 CCGGGATGGCCTACTTCG 59.578 66.667 3.32 1.52 0.00 3.79
2035 7535 2.432300 CCGGGATGGCCTACTTCGT 61.432 63.158 3.32 0.00 0.00 3.85
2036 7536 1.067582 CGGGATGGCCTACTTCGTC 59.932 63.158 3.32 0.00 0.00 4.20
2037 7537 1.067582 GGGATGGCCTACTTCGTCG 59.932 63.158 3.32 0.00 0.00 5.12
2038 7538 1.673808 GGGATGGCCTACTTCGTCGT 61.674 60.000 3.32 0.00 0.00 4.34
2039 7539 0.248949 GGATGGCCTACTTCGTCGTC 60.249 60.000 3.32 0.00 0.00 4.20
2040 7540 0.591741 GATGGCCTACTTCGTCGTCG 60.592 60.000 3.32 0.00 38.55 5.12
2041 7541 2.578981 GGCCTACTTCGTCGTCGC 60.579 66.667 0.00 0.00 36.96 5.19
2042 7542 2.578981 GCCTACTTCGTCGTCGCC 60.579 66.667 0.00 0.00 36.96 5.54
2043 7543 2.277120 CCTACTTCGTCGTCGCCG 60.277 66.667 0.00 0.00 36.96 6.46
2044 7544 2.743752 CCTACTTCGTCGTCGCCGA 61.744 63.158 0.00 0.00 41.73 5.54
2052 7552 3.289062 TCGTCGCCGACAAGACCA 61.289 61.111 18.40 0.00 38.40 4.02
2053 7553 2.126071 CGTCGCCGACAAGACCAT 60.126 61.111 18.40 0.00 35.63 3.55
2054 7554 2.158959 CGTCGCCGACAAGACCATC 61.159 63.158 18.40 0.00 35.63 3.51
2055 7555 1.810030 GTCGCCGACAAGACCATCC 60.810 63.158 13.23 0.00 32.09 3.51
2056 7556 1.982395 TCGCCGACAAGACCATCCT 60.982 57.895 0.00 0.00 0.00 3.24
2057 7557 1.519455 CGCCGACAAGACCATCCTC 60.519 63.158 0.00 0.00 0.00 3.71
2058 7558 1.901085 GCCGACAAGACCATCCTCT 59.099 57.895 0.00 0.00 0.00 3.69
2059 7559 0.179097 GCCGACAAGACCATCCTCTC 60.179 60.000 0.00 0.00 0.00 3.20
2060 7560 0.461961 CCGACAAGACCATCCTCTCC 59.538 60.000 0.00 0.00 0.00 3.71
2061 7561 1.186200 CGACAAGACCATCCTCTCCA 58.814 55.000 0.00 0.00 0.00 3.86
2062 7562 1.759445 CGACAAGACCATCCTCTCCAT 59.241 52.381 0.00 0.00 0.00 3.41
2063 7563 2.482664 CGACAAGACCATCCTCTCCATG 60.483 54.545 0.00 0.00 0.00 3.66
2064 7564 1.842562 ACAAGACCATCCTCTCCATGG 59.157 52.381 4.97 4.97 45.74 3.66
2065 7565 0.842635 AAGACCATCCTCTCCATGGC 59.157 55.000 6.96 0.00 44.32 4.40
2066 7566 1.059006 AGACCATCCTCTCCATGGCC 61.059 60.000 6.96 0.00 44.32 5.36
2067 7567 1.308128 ACCATCCTCTCCATGGCCA 60.308 57.895 8.56 8.56 44.32 5.36
2068 7568 1.351080 ACCATCCTCTCCATGGCCAG 61.351 60.000 13.05 4.75 44.32 4.85
2069 7569 1.454976 CATCCTCTCCATGGCCAGG 59.545 63.158 13.05 12.17 0.00 4.45
2070 7570 1.058428 CATCCTCTCCATGGCCAGGA 61.058 60.000 25.80 25.80 39.42 3.86
2071 7571 0.327867 ATCCTCTCCATGGCCAGGAA 60.328 55.000 26.81 15.29 38.56 3.36
2072 7572 0.984961 TCCTCTCCATGGCCAGGAAG 60.985 60.000 21.32 8.61 34.08 3.46
2073 7573 1.153005 CTCTCCATGGCCAGGAAGC 60.153 63.158 21.32 0.00 34.08 3.86
2074 7574 1.918467 CTCTCCATGGCCAGGAAGCA 61.918 60.000 21.32 7.78 34.08 3.91
2075 7575 1.751927 CTCCATGGCCAGGAAGCAC 60.752 63.158 21.32 0.00 34.08 4.40
2076 7576 2.207501 CTCCATGGCCAGGAAGCACT 62.208 60.000 21.32 0.00 34.08 4.40
2077 7577 1.751927 CCATGGCCAGGAAGCACTC 60.752 63.158 21.32 0.00 0.00 3.51
2078 7578 1.751927 CATGGCCAGGAAGCACTCC 60.752 63.158 13.35 0.00 45.81 3.85
2087 7587 3.542046 GAAGCACTCCTTCCAGGAC 57.458 57.895 0.00 0.00 40.06 3.85
2088 7588 0.390472 GAAGCACTCCTTCCAGGACG 60.390 60.000 0.00 0.00 40.06 4.79
2089 7589 1.122019 AAGCACTCCTTCCAGGACGT 61.122 55.000 0.00 0.00 40.06 4.34
2090 7590 1.374758 GCACTCCTTCCAGGACGTG 60.375 63.158 0.00 13.71 40.06 4.49
2091 7591 1.816863 GCACTCCTTCCAGGACGTGA 61.817 60.000 18.78 1.72 40.06 4.35
2092 7592 0.244994 CACTCCTTCCAGGACGTGAG 59.755 60.000 13.14 8.88 40.06 3.51
2093 7593 0.112606 ACTCCTTCCAGGACGTGAGA 59.887 55.000 14.62 0.00 40.06 3.27
2094 7594 0.814457 CTCCTTCCAGGACGTGAGAG 59.186 60.000 0.00 0.00 40.06 3.20
2095 7595 1.216710 CCTTCCAGGACGTGAGAGC 59.783 63.158 0.00 0.00 37.67 4.09
2096 7596 1.536073 CCTTCCAGGACGTGAGAGCA 61.536 60.000 0.00 0.00 37.67 4.26
2097 7597 0.389166 CTTCCAGGACGTGAGAGCAC 60.389 60.000 0.00 0.00 41.67 4.40
2098 7598 1.816863 TTCCAGGACGTGAGAGCACC 61.817 60.000 0.00 0.00 42.09 5.01
2099 7599 2.279069 CCAGGACGTGAGAGCACCT 61.279 63.158 0.00 0.00 42.09 4.00
2100 7600 1.214062 CAGGACGTGAGAGCACCTC 59.786 63.158 0.00 0.00 42.09 3.85
2109 7609 1.802069 GAGAGCACCTCAAGAACACC 58.198 55.000 1.79 0.00 41.58 4.16
2110 7610 1.346068 GAGAGCACCTCAAGAACACCT 59.654 52.381 1.79 0.00 41.58 4.00
2111 7611 1.346068 AGAGCACCTCAAGAACACCTC 59.654 52.381 0.00 0.00 32.06 3.85
2112 7612 0.398318 AGCACCTCAAGAACACCTCC 59.602 55.000 0.00 0.00 0.00 4.30
2113 7613 0.398318 GCACCTCAAGAACACCTCCT 59.602 55.000 0.00 0.00 0.00 3.69
2114 7614 1.202818 GCACCTCAAGAACACCTCCTT 60.203 52.381 0.00 0.00 0.00 3.36
2115 7615 2.772287 CACCTCAAGAACACCTCCTTC 58.228 52.381 0.00 0.00 0.00 3.46
2116 7616 1.700186 ACCTCAAGAACACCTCCTTCC 59.300 52.381 0.00 0.00 0.00 3.46
2117 7617 1.699634 CCTCAAGAACACCTCCTTCCA 59.300 52.381 0.00 0.00 0.00 3.53
2118 7618 2.551071 CCTCAAGAACACCTCCTTCCAC 60.551 54.545 0.00 0.00 0.00 4.02
2119 7619 2.370189 CTCAAGAACACCTCCTTCCACT 59.630 50.000 0.00 0.00 0.00 4.00
2120 7620 3.578716 CTCAAGAACACCTCCTTCCACTA 59.421 47.826 0.00 0.00 0.00 2.74
2121 7621 3.971305 TCAAGAACACCTCCTTCCACTAA 59.029 43.478 0.00 0.00 0.00 2.24
2122 7622 4.040461 TCAAGAACACCTCCTTCCACTAAG 59.960 45.833 0.00 0.00 34.73 2.18
2123 7623 3.588569 AGAACACCTCCTTCCACTAAGT 58.411 45.455 0.00 0.00 32.89 2.24
2124 7624 4.748701 AGAACACCTCCTTCCACTAAGTA 58.251 43.478 0.00 0.00 32.89 2.24
2125 7625 4.773149 AGAACACCTCCTTCCACTAAGTAG 59.227 45.833 0.00 0.00 32.89 2.57
2126 7626 2.832733 ACACCTCCTTCCACTAAGTAGC 59.167 50.000 0.00 0.00 32.89 3.58
2127 7627 2.168728 CACCTCCTTCCACTAAGTAGCC 59.831 54.545 0.00 0.00 32.89 3.93
2128 7628 2.044630 ACCTCCTTCCACTAAGTAGCCT 59.955 50.000 0.00 0.00 32.89 4.58
2129 7629 3.271490 ACCTCCTTCCACTAAGTAGCCTA 59.729 47.826 0.00 0.00 32.89 3.93
2130 7630 4.078513 ACCTCCTTCCACTAAGTAGCCTAT 60.079 45.833 0.00 0.00 32.89 2.57
2195 7695 4.840005 GCCGGTCTGTAGCCCTGC 62.840 72.222 1.90 0.00 0.00 4.85
2210 7710 2.016318 CCCTGCATAATGTTCAGCGAA 58.984 47.619 0.00 0.00 0.00 4.70
2237 8028 0.320771 CAGGTGTACTGCGCTTCCTT 60.321 55.000 9.73 0.00 40.97 3.36
2238 8029 0.037232 AGGTGTACTGCGCTTCCTTC 60.037 55.000 9.73 0.00 0.00 3.46
2239 8030 0.037232 GGTGTACTGCGCTTCCTTCT 60.037 55.000 9.73 0.00 0.00 2.85
2240 8031 1.351153 GTGTACTGCGCTTCCTTCTC 58.649 55.000 9.73 0.00 0.00 2.87
2241 8032 1.067495 GTGTACTGCGCTTCCTTCTCT 60.067 52.381 9.73 0.00 0.00 3.10
2242 8033 1.067565 TGTACTGCGCTTCCTTCTCTG 60.068 52.381 9.73 0.00 0.00 3.35
2243 8034 0.108615 TACTGCGCTTCCTTCTCTGC 60.109 55.000 9.73 0.00 0.00 4.26
2247 8038 3.792904 GCTTCCTTCTCTGCGAGC 58.207 61.111 0.00 0.00 0.00 5.03
2248 8039 1.079543 GCTTCCTTCTCTGCGAGCA 60.080 57.895 0.00 0.00 0.00 4.26
2249 8040 0.671781 GCTTCCTTCTCTGCGAGCAA 60.672 55.000 0.00 0.00 0.00 3.91
2250 8041 1.357907 CTTCCTTCTCTGCGAGCAAG 58.642 55.000 0.00 0.62 0.00 4.01
2251 8042 0.671781 TTCCTTCTCTGCGAGCAAGC 60.672 55.000 0.00 0.00 37.71 4.01
2252 8043 1.375140 CCTTCTCTGCGAGCAAGCA 60.375 57.895 5.99 5.99 45.96 3.91
2253 8044 1.633852 CCTTCTCTGCGAGCAAGCAC 61.634 60.000 1.83 0.00 42.92 4.40
2254 8045 0.669932 CTTCTCTGCGAGCAAGCACT 60.670 55.000 1.83 0.00 42.92 4.40
2255 8046 0.603065 TTCTCTGCGAGCAAGCACTA 59.397 50.000 1.83 0.00 42.92 2.74
2256 8047 0.603065 TCTCTGCGAGCAAGCACTAA 59.397 50.000 1.83 0.00 42.92 2.24
2257 8048 1.205655 TCTCTGCGAGCAAGCACTAAT 59.794 47.619 1.83 0.00 42.92 1.73
2258 8049 2.005451 CTCTGCGAGCAAGCACTAATT 58.995 47.619 1.83 0.00 42.92 1.40
2259 8050 3.119137 TCTCTGCGAGCAAGCACTAATTA 60.119 43.478 1.83 0.00 42.92 1.40
2266 8057 5.614231 GCGAGCAAGCACTAATTATCTGATG 60.614 44.000 0.00 0.00 37.05 3.07
2334 8125 9.847224 TTCCAGACATCTTTAATTAATACTCCC 57.153 33.333 0.00 0.00 0.00 4.30
2335 8126 9.225682 TCCAGACATCTTTAATTAATACTCCCT 57.774 33.333 0.00 0.00 0.00 4.20
2336 8127 9.495572 CCAGACATCTTTAATTAATACTCCCTC 57.504 37.037 0.00 0.00 0.00 4.30
2341 8132 9.495572 CATCTTTAATTAATACTCCCTCTGTCC 57.504 37.037 0.00 0.00 0.00 4.02
2342 8133 8.030913 TCTTTAATTAATACTCCCTCTGTCCC 57.969 38.462 0.00 0.00 0.00 4.46
2343 8134 7.626084 TCTTTAATTAATACTCCCTCTGTCCCA 59.374 37.037 0.00 0.00 0.00 4.37
2344 8135 7.758820 TTAATTAATACTCCCTCTGTCCCAA 57.241 36.000 0.00 0.00 0.00 4.12
2345 8136 6.652205 AATTAATACTCCCTCTGTCCCAAA 57.348 37.500 0.00 0.00 0.00 3.28
2346 8137 6.652205 ATTAATACTCCCTCTGTCCCAAAA 57.348 37.500 0.00 0.00 0.00 2.44
2347 8138 6.652205 TTAATACTCCCTCTGTCCCAAAAT 57.348 37.500 0.00 0.00 0.00 1.82
2348 8139 7.758820 TTAATACTCCCTCTGTCCCAAAATA 57.241 36.000 0.00 0.00 0.00 1.40
2349 8140 6.848562 AATACTCCCTCTGTCCCAAAATAT 57.151 37.500 0.00 0.00 0.00 1.28
2350 8141 7.947782 AATACTCCCTCTGTCCCAAAATATA 57.052 36.000 0.00 0.00 0.00 0.86
2351 8142 7.947782 ATACTCCCTCTGTCCCAAAATATAA 57.052 36.000 0.00 0.00 0.00 0.98
2352 8143 6.253946 ACTCCCTCTGTCCCAAAATATAAG 57.746 41.667 0.00 0.00 0.00 1.73
2353 8144 5.970640 ACTCCCTCTGTCCCAAAATATAAGA 59.029 40.000 0.00 0.00 0.00 2.10
2354 8145 6.447084 ACTCCCTCTGTCCCAAAATATAAGAA 59.553 38.462 0.00 0.00 0.00 2.52
2355 8146 6.659824 TCCCTCTGTCCCAAAATATAAGAAC 58.340 40.000 0.00 0.00 0.00 3.01
2356 8147 5.527582 CCCTCTGTCCCAAAATATAAGAACG 59.472 44.000 0.00 0.00 0.00 3.95
2357 8148 6.113411 CCTCTGTCCCAAAATATAAGAACGT 58.887 40.000 0.00 0.00 0.00 3.99
2358 8149 6.598064 CCTCTGTCCCAAAATATAAGAACGTT 59.402 38.462 0.00 0.00 0.00 3.99
2359 8150 7.120726 CCTCTGTCCCAAAATATAAGAACGTTT 59.879 37.037 0.46 0.00 0.00 3.60
2360 8151 8.036273 TCTGTCCCAAAATATAAGAACGTTTC 57.964 34.615 0.46 0.00 0.00 2.78
2361 8152 7.881232 TCTGTCCCAAAATATAAGAACGTTTCT 59.119 33.333 0.46 0.00 43.15 2.52
2375 8166 7.941795 AGAACGTTTCTTATATTATGGGACG 57.058 36.000 0.46 0.00 36.36 4.79
2376 8167 6.927381 AGAACGTTTCTTATATTATGGGACGG 59.073 38.462 0.46 0.00 36.36 4.79
2377 8168 6.409524 ACGTTTCTTATATTATGGGACGGA 57.590 37.500 0.00 0.00 32.81 4.69
2378 8169 6.453092 ACGTTTCTTATATTATGGGACGGAG 58.547 40.000 0.00 0.00 32.81 4.63
2379 8170 5.867716 CGTTTCTTATATTATGGGACGGAGG 59.132 44.000 0.00 0.00 0.00 4.30
2380 8171 6.171213 GTTTCTTATATTATGGGACGGAGGG 58.829 44.000 0.00 0.00 0.00 4.30
2381 8172 5.279562 TCTTATATTATGGGACGGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
2382 8173 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
2400 8191 6.127675 GGAGGGAGTAACAACTAGAAGTACTG 60.128 46.154 0.00 0.00 0.00 2.74
2423 8214 4.409718 TTGTACTACAACTCTGGTGCAA 57.590 40.909 0.00 0.00 32.34 4.08
2427 8218 1.532868 CTACAACTCTGGTGCAAGTGC 59.467 52.381 0.00 0.00 42.50 4.40
2444 8235 1.274728 GTGCACTCACTCATCTCACCT 59.725 52.381 10.32 0.00 40.03 4.00
2533 8325 8.516811 TTCATTCTTTTGAACTCGTACTACTC 57.483 34.615 0.00 0.00 41.77 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 0.991920 TCCATTCAACCCAGACCCTC 59.008 55.000 0.00 0.00 0.00 4.30
2 3 0.995024 CTCCATTCAACCCAGACCCT 59.005 55.000 0.00 0.00 0.00 4.34
3 4 0.698818 ACTCCATTCAACCCAGACCC 59.301 55.000 0.00 0.00 0.00 4.46
6 7 2.174639 ACAACACTCCATTCAACCCAGA 59.825 45.455 0.00 0.00 0.00 3.86
8 9 2.746279 ACAACACTCCATTCAACCCA 57.254 45.000 0.00 0.00 0.00 4.51
9 10 3.119495 GCATACAACACTCCATTCAACCC 60.119 47.826 0.00 0.00 0.00 4.11
11 12 4.764679 TGCATACAACACTCCATTCAAC 57.235 40.909 0.00 0.00 0.00 3.18
25 26 1.474320 GGCCTACCGATGTTGCATACA 60.474 52.381 0.00 4.56 41.97 2.29
26 27 1.226746 GGCCTACCGATGTTGCATAC 58.773 55.000 0.00 0.00 0.00 2.39
27 28 0.107831 GGGCCTACCGATGTTGCATA 59.892 55.000 0.84 0.00 36.48 3.14
28 29 1.152963 GGGCCTACCGATGTTGCAT 60.153 57.895 0.84 0.00 36.48 3.96
30 31 1.819632 CTGGGCCTACCGATGTTGC 60.820 63.158 4.53 0.00 44.64 4.17
32 33 1.623542 GGTCTGGGCCTACCGATGTT 61.624 60.000 12.03 0.00 44.64 2.71
34 35 2.032860 CTGGTCTGGGCCTACCGATG 62.033 65.000 19.50 11.03 44.64 3.84
36 37 2.363795 CTGGTCTGGGCCTACCGA 60.364 66.667 19.50 10.62 44.64 4.69
37 38 1.550130 TTTCTGGTCTGGGCCTACCG 61.550 60.000 19.50 15.09 44.64 4.02
38 39 0.696501 TTTTCTGGTCTGGGCCTACC 59.303 55.000 18.45 18.45 40.81 3.18
39 40 2.579410 TTTTTCTGGTCTGGGCCTAC 57.421 50.000 4.53 2.69 0.00 3.18
55 56 3.547413 GCTTCGGCACTTCTTACGTTTTT 60.547 43.478 0.00 0.00 41.33 1.94
56 57 2.032290 GCTTCGGCACTTCTTACGTTTT 60.032 45.455 0.00 0.00 41.33 2.43
58 59 1.145803 GCTTCGGCACTTCTTACGTT 58.854 50.000 0.00 0.00 41.33 3.99
59 60 2.823628 GCTTCGGCACTTCTTACGT 58.176 52.632 0.00 0.00 41.33 3.57
70 71 0.166814 GATGTGTGAACTGCTTCGGC 59.833 55.000 0.00 0.00 42.19 5.54
71 72 1.195448 GTGATGTGTGAACTGCTTCGG 59.805 52.381 0.00 0.00 0.00 4.30
72 73 1.866601 TGTGATGTGTGAACTGCTTCG 59.133 47.619 0.00 0.00 0.00 3.79
73 74 2.613595 TGTGTGATGTGTGAACTGCTTC 59.386 45.455 0.00 0.00 0.00 3.86
75 76 2.158914 TCTGTGTGATGTGTGAACTGCT 60.159 45.455 0.00 0.00 0.00 4.24
76 77 2.212652 TCTGTGTGATGTGTGAACTGC 58.787 47.619 0.00 0.00 0.00 4.40
77 78 3.721035 TCTCTGTGTGATGTGTGAACTG 58.279 45.455 0.00 0.00 0.00 3.16
78 79 4.375272 CTTCTCTGTGTGATGTGTGAACT 58.625 43.478 0.00 0.00 0.00 3.01
79 80 3.496130 CCTTCTCTGTGTGATGTGTGAAC 59.504 47.826 0.00 0.00 0.00 3.18
80 81 3.494924 CCCTTCTCTGTGTGATGTGTGAA 60.495 47.826 0.00 0.00 0.00 3.18
83 84 1.271054 GCCCTTCTCTGTGTGATGTGT 60.271 52.381 0.00 0.00 0.00 3.72
84 85 1.002888 AGCCCTTCTCTGTGTGATGTG 59.997 52.381 0.00 0.00 0.00 3.21
85 86 1.356124 AGCCCTTCTCTGTGTGATGT 58.644 50.000 0.00 0.00 0.00 3.06
86 87 2.499289 ACTAGCCCTTCTCTGTGTGATG 59.501 50.000 0.00 0.00 0.00 3.07
87 88 2.763448 GACTAGCCCTTCTCTGTGTGAT 59.237 50.000 0.00 0.00 0.00 3.06
88 89 2.171840 GACTAGCCCTTCTCTGTGTGA 58.828 52.381 0.00 0.00 0.00 3.58
89 90 1.205893 GGACTAGCCCTTCTCTGTGTG 59.794 57.143 0.00 0.00 0.00 3.82
91 92 0.457851 CGGACTAGCCCTTCTCTGTG 59.542 60.000 0.00 0.00 0.00 3.66
93 94 2.022240 GCCGGACTAGCCCTTCTCTG 62.022 65.000 5.05 0.00 0.00 3.35
94 95 1.758906 GCCGGACTAGCCCTTCTCT 60.759 63.158 5.05 0.00 0.00 3.10
95 96 2.798364 GGCCGGACTAGCCCTTCTC 61.798 68.421 5.05 0.00 45.16 2.87
96 97 2.764547 GGCCGGACTAGCCCTTCT 60.765 66.667 5.05 0.00 45.16 2.85
118 119 4.722700 AAACCGGCGGCATCTGCT 62.723 61.111 28.71 0.15 41.70 4.24
119 120 4.179579 GAAACCGGCGGCATCTGC 62.180 66.667 28.71 5.92 41.14 4.26
120 121 3.864686 CGAAACCGGCGGCATCTG 61.865 66.667 28.71 15.76 0.00 2.90
161 162 2.597117 TAAATCGTCGGTCGGTCGGC 62.597 60.000 0.00 0.00 40.32 5.54
162 163 0.863119 GTAAATCGTCGGTCGGTCGG 60.863 60.000 0.00 0.00 40.32 4.79
164 165 0.096976 TCGTAAATCGTCGGTCGGTC 59.903 55.000 0.00 0.00 40.80 4.79
166 167 0.097674 ACTCGTAAATCGTCGGTCGG 59.902 55.000 0.00 0.00 40.80 4.79
167 168 1.177668 CACTCGTAAATCGTCGGTCG 58.822 55.000 0.00 0.00 40.80 4.79
168 169 2.532531 TCACTCGTAAATCGTCGGTC 57.467 50.000 0.00 0.00 40.80 4.79
170 171 3.059044 CAGTTTCACTCGTAAATCGTCGG 59.941 47.826 0.00 0.00 40.80 4.79
171 172 3.059044 CCAGTTTCACTCGTAAATCGTCG 59.941 47.826 0.00 0.00 40.80 5.12
172 173 3.181533 GCCAGTTTCACTCGTAAATCGTC 60.182 47.826 0.00 0.00 40.80 4.20
174 175 2.222508 CGCCAGTTTCACTCGTAAATCG 60.223 50.000 0.00 0.00 41.41 3.34
175 176 2.093783 CCGCCAGTTTCACTCGTAAATC 59.906 50.000 0.00 0.00 0.00 2.17
176 177 2.073816 CCGCCAGTTTCACTCGTAAAT 58.926 47.619 0.00 0.00 0.00 1.40
177 178 1.504359 CCGCCAGTTTCACTCGTAAA 58.496 50.000 0.00 0.00 0.00 2.01
180 181 2.665185 GCCGCCAGTTTCACTCGT 60.665 61.111 0.00 0.00 0.00 4.18
181 182 2.664851 TGCCGCCAGTTTCACTCG 60.665 61.111 0.00 0.00 0.00 4.18
184 185 3.670377 GGGTGCCGCCAGTTTCAC 61.670 66.667 0.00 0.00 39.65 3.18
195 196 2.050442 CGAAACAAAGCGGGTGCC 60.050 61.111 0.00 0.00 44.31 5.01
196 197 0.526739 AAACGAAACAAAGCGGGTGC 60.527 50.000 0.00 0.00 43.24 5.01
197 198 1.915952 AAAACGAAACAAAGCGGGTG 58.084 45.000 0.00 0.00 0.00 4.61
198 199 2.658373 AAAAACGAAACAAAGCGGGT 57.342 40.000 0.00 0.00 0.00 5.28
340 560 1.526887 CTCGCTTTTCACGCTGAAGAA 59.473 47.619 1.72 0.00 37.70 2.52
346 566 1.795286 CTTTCTCTCGCTTTTCACGCT 59.205 47.619 0.00 0.00 0.00 5.07
347 567 1.792949 TCTTTCTCTCGCTTTTCACGC 59.207 47.619 0.00 0.00 0.00 5.34
348 568 4.209288 TCTTTCTTTCTCTCGCTTTTCACG 59.791 41.667 0.00 0.00 0.00 4.35
423 643 4.161565 TCGTCCTTCACATGCCTAGTATTT 59.838 41.667 0.00 0.00 0.00 1.40
426 646 2.730382 TCGTCCTTCACATGCCTAGTA 58.270 47.619 0.00 0.00 0.00 1.82
427 647 1.557099 TCGTCCTTCACATGCCTAGT 58.443 50.000 0.00 0.00 0.00 2.57
428 648 2.477825 CATCGTCCTTCACATGCCTAG 58.522 52.381 0.00 0.00 0.00 3.02
429 649 1.138859 CCATCGTCCTTCACATGCCTA 59.861 52.381 0.00 0.00 0.00 3.93
431 651 1.097547 CCCATCGTCCTTCACATGCC 61.098 60.000 0.00 0.00 0.00 4.40
458 679 4.320456 CCGGAGCCACACTGCTGT 62.320 66.667 0.00 0.00 42.95 4.40
472 693 2.361189 AAAAATCCTGGCCAACCGG 58.639 52.632 7.01 4.72 42.66 5.28
487 708 4.538746 AGGAAACCACCGTTTTGAAAAA 57.461 36.364 0.00 0.00 42.34 1.94
532 753 1.195115 TCACCCTGATAGTGCCTCAC 58.805 55.000 0.00 0.00 35.14 3.51
572 793 6.071165 ACAGTGCTGATCCGATCATCATATAA 60.071 38.462 15.97 0.00 37.68 0.98
573 794 5.420104 ACAGTGCTGATCCGATCATCATATA 59.580 40.000 15.97 0.00 37.68 0.86
574 795 4.222366 ACAGTGCTGATCCGATCATCATAT 59.778 41.667 15.97 7.39 37.68 1.78
575 796 3.575687 ACAGTGCTGATCCGATCATCATA 59.424 43.478 15.97 0.48 37.68 2.15
576 797 2.367894 ACAGTGCTGATCCGATCATCAT 59.632 45.455 15.97 5.23 37.68 2.45
577 798 1.758862 ACAGTGCTGATCCGATCATCA 59.241 47.619 11.53 10.84 38.85 3.07
578 799 2.522836 ACAGTGCTGATCCGATCATC 57.477 50.000 11.53 8.29 38.85 2.92
579 800 2.093288 ACAACAGTGCTGATCCGATCAT 60.093 45.455 11.53 0.00 38.85 2.45
615 5903 4.681781 GCAAGAAAAGGGAGATCTCGATCA 60.682 45.833 16.46 0.00 40.22 2.92
640 5928 4.146564 TCTTTACCCACCAAACTAAAGCC 58.853 43.478 0.00 0.00 0.00 4.35
658 5946 7.201741 CCCTCGTCTTTCTTTCTTTCTTTCTTT 60.202 37.037 0.00 0.00 0.00 2.52
659 5947 6.261158 CCCTCGTCTTTCTTTCTTTCTTTCTT 59.739 38.462 0.00 0.00 0.00 2.52
660 5948 5.760743 CCCTCGTCTTTCTTTCTTTCTTTCT 59.239 40.000 0.00 0.00 0.00 2.52
661 5949 5.758784 TCCCTCGTCTTTCTTTCTTTCTTTC 59.241 40.000 0.00 0.00 0.00 2.62
687 5975 0.256464 TTTGTCCGTTGGAGGGTGTT 59.744 50.000 0.00 0.00 29.39 3.32
690 5978 0.476771 ATGTTTGTCCGTTGGAGGGT 59.523 50.000 0.00 0.00 29.39 4.34
700 6001 4.019174 ACAGGATTGGATGATGTTTGTCC 58.981 43.478 0.00 0.00 0.00 4.02
701 6002 4.142315 CCACAGGATTGGATGATGTTTGTC 60.142 45.833 0.00 0.00 39.24 3.18
743 6047 3.804329 GCAGGGGCCGGTTATCCA 61.804 66.667 1.90 0.00 0.00 3.41
744 6048 3.352990 TTGCAGGGGCCGGTTATCC 62.353 63.158 1.90 0.00 40.13 2.59
745 6049 2.119029 GTTGCAGGGGCCGGTTATC 61.119 63.158 1.90 0.00 40.13 1.75
746 6050 2.044352 GTTGCAGGGGCCGGTTAT 60.044 61.111 1.90 0.00 40.13 1.89
747 6051 4.354162 GGTTGCAGGGGCCGGTTA 62.354 66.667 1.90 0.00 40.13 2.85
767 6071 3.204827 CTTTCCGGGAGCGGCATG 61.205 66.667 0.00 0.00 0.00 4.06
776 6080 3.121030 CAGAGCACGCTTTCCGGG 61.121 66.667 0.00 0.00 45.15 5.73
803 6136 2.079925 GGACTTGGAGTGATGAACTGC 58.920 52.381 0.00 0.00 46.91 4.40
811 6144 1.760613 ACTCGTTTGGACTTGGAGTGA 59.239 47.619 0.00 0.00 36.66 3.41
858 6205 1.209127 CACGCACGGTTTTGGGATC 59.791 57.895 0.00 0.00 33.72 3.36
860 6207 2.902846 CCACGCACGGTTTTGGGA 60.903 61.111 0.00 0.00 33.72 4.37
906 6259 1.671742 GGACGAGGAGTTGAGCCAA 59.328 57.895 0.00 0.00 0.00 4.52
925 6278 1.205064 CTGTTGCTTGACGCTTCCG 59.795 57.895 0.00 0.00 40.11 4.30
932 6285 2.647297 GGCTGGCTGTTGCTTGAC 59.353 61.111 0.00 0.00 39.59 3.18
985 6357 1.060937 GCATAAACGGCTCAGCACG 59.939 57.895 0.00 1.95 0.00 5.34
1000 6372 3.049674 CGCCGTGGTCTTGTGCAT 61.050 61.111 0.00 0.00 0.00 3.96
1059 6433 2.125673 GCGAGGGCGAGCTTGTTA 60.126 61.111 2.14 0.00 40.82 2.41
1118 6496 5.070981 TGAACTGAACTGACCTCTGAAGAAT 59.929 40.000 0.00 0.00 0.00 2.40
1129 6507 1.202698 ACCTGGCTGAACTGAACTGAC 60.203 52.381 0.00 0.00 0.00 3.51
1150 6528 4.948608 AGTGTCAGACTATCAGTACACG 57.051 45.455 1.31 0.00 41.51 4.49
1173 6551 9.815936 GAAACATTAGGAAAAGAAATGCATTTG 57.184 29.630 28.67 12.85 34.63 2.32
1174 6552 9.002600 GGAAACATTAGGAAAAGAAATGCATTT 57.997 29.630 24.33 24.33 34.63 2.32
1190 6575 2.348666 CGTCGCTTCTGGGAAACATTAG 59.651 50.000 0.00 0.00 36.89 1.73
1285 6671 7.284034 CCTTATACATGAAAATCAGCAACTCCT 59.716 37.037 0.00 0.00 0.00 3.69
1307 6695 8.311109 ACAAAAGAAAAACTCTTGCTTTCCTTA 58.689 29.630 0.00 0.00 44.00 2.69
1308 6696 7.161404 ACAAAAGAAAAACTCTTGCTTTCCTT 58.839 30.769 0.00 0.00 44.00 3.36
1309 6697 6.701340 ACAAAAGAAAAACTCTTGCTTTCCT 58.299 32.000 0.00 0.00 44.00 3.36
1310 6698 6.036083 GGACAAAAGAAAAACTCTTGCTTTCC 59.964 38.462 0.00 0.00 44.00 3.13
1311 6699 6.237569 CGGACAAAAGAAAAACTCTTGCTTTC 60.238 38.462 0.00 0.00 44.00 2.62
1312 6700 5.576774 CGGACAAAAGAAAAACTCTTGCTTT 59.423 36.000 0.00 0.00 44.00 3.51
1313 6701 5.102313 CGGACAAAAGAAAAACTCTTGCTT 58.898 37.500 0.00 0.00 44.00 3.91
1314 6702 4.440112 CCGGACAAAAGAAAAACTCTTGCT 60.440 41.667 0.00 0.00 44.00 3.91
1315 6703 3.796717 CCGGACAAAAGAAAAACTCTTGC 59.203 43.478 0.00 0.00 44.00 4.01
1316 6704 4.993905 ACCGGACAAAAGAAAAACTCTTG 58.006 39.130 9.46 0.00 44.00 3.02
1317 6705 5.654603 AACCGGACAAAAGAAAAACTCTT 57.345 34.783 9.46 0.00 46.92 2.85
1318 6706 5.654603 AAACCGGACAAAAGAAAAACTCT 57.345 34.783 9.46 0.00 35.13 3.24
1319 6707 5.865013 TGAAAACCGGACAAAAGAAAAACTC 59.135 36.000 9.46 0.00 0.00 3.01
1320 6708 5.785243 TGAAAACCGGACAAAAGAAAAACT 58.215 33.333 9.46 0.00 0.00 2.66
1321 6709 6.656314 ATGAAAACCGGACAAAAGAAAAAC 57.344 33.333 9.46 0.00 0.00 2.43
1322 6710 8.035984 AGTTATGAAAACCGGACAAAAGAAAAA 58.964 29.630 9.46 0.00 0.00 1.94
1323 6711 7.489757 CAGTTATGAAAACCGGACAAAAGAAAA 59.510 33.333 9.46 0.00 0.00 2.29
1324 6712 6.975772 CAGTTATGAAAACCGGACAAAAGAAA 59.024 34.615 9.46 0.00 0.00 2.52
1325 6713 6.319152 TCAGTTATGAAAACCGGACAAAAGAA 59.681 34.615 9.46 0.00 30.61 2.52
1326 6714 5.823570 TCAGTTATGAAAACCGGACAAAAGA 59.176 36.000 9.46 0.00 30.61 2.52
1327 6715 6.067263 TCAGTTATGAAAACCGGACAAAAG 57.933 37.500 9.46 0.00 30.61 2.27
1328 6716 6.095720 AGTTCAGTTATGAAAACCGGACAAAA 59.904 34.615 9.46 0.00 46.75 2.44
1331 6719 4.513692 CAGTTCAGTTATGAAAACCGGACA 59.486 41.667 9.46 2.86 46.75 4.02
1335 6725 5.418310 ACACAGTTCAGTTATGAAAACCG 57.582 39.130 0.00 0.00 46.75 4.44
1356 6746 2.202743 TCGCCAGCTGCACGATAC 60.203 61.111 21.65 0.00 41.33 2.24
1663 7074 1.202486 TCTTGGGACACTGACAACGAC 60.202 52.381 0.00 0.00 39.29 4.34
1812 7312 4.707105 TCAAGATCAAGTTTCAGCAGTCA 58.293 39.130 0.00 0.00 0.00 3.41
1922 7422 4.526970 ACTGAATGGCTACTTACAATGGG 58.473 43.478 0.00 0.00 0.00 4.00
1927 7427 5.047590 TCGAAGAACTGAATGGCTACTTACA 60.048 40.000 0.00 0.00 0.00 2.41
1928 7428 5.288952 GTCGAAGAACTGAATGGCTACTTAC 59.711 44.000 0.00 0.00 39.69 2.34
1929 7429 5.408356 GTCGAAGAACTGAATGGCTACTTA 58.592 41.667 0.00 0.00 39.69 2.24
1930 7430 4.246458 GTCGAAGAACTGAATGGCTACTT 58.754 43.478 0.00 0.00 39.69 2.24
1931 7431 3.673594 CGTCGAAGAACTGAATGGCTACT 60.674 47.826 0.00 0.00 39.69 2.57
1932 7432 2.599082 CGTCGAAGAACTGAATGGCTAC 59.401 50.000 0.00 0.00 39.69 3.58
1933 7433 2.490509 TCGTCGAAGAACTGAATGGCTA 59.509 45.455 0.00 0.00 39.69 3.93
1934 7434 1.272490 TCGTCGAAGAACTGAATGGCT 59.728 47.619 0.00 0.00 39.69 4.75
1935 7435 1.710013 TCGTCGAAGAACTGAATGGC 58.290 50.000 0.00 0.00 39.69 4.40
1936 7436 4.201724 GGATTTCGTCGAAGAACTGAATGG 60.202 45.833 13.50 0.00 39.69 3.16
1937 7437 4.627467 AGGATTTCGTCGAAGAACTGAATG 59.373 41.667 13.50 0.00 39.69 2.67
1938 7438 4.822026 AGGATTTCGTCGAAGAACTGAAT 58.178 39.130 13.50 4.59 39.69 2.57
1939 7439 4.252971 AGGATTTCGTCGAAGAACTGAA 57.747 40.909 13.50 0.00 39.69 3.02
1940 7440 3.936372 AGGATTTCGTCGAAGAACTGA 57.064 42.857 13.50 0.00 39.69 3.41
1941 7441 3.423645 GCAAGGATTTCGTCGAAGAACTG 60.424 47.826 13.50 7.41 39.69 3.16
1942 7442 2.737252 GCAAGGATTTCGTCGAAGAACT 59.263 45.455 13.50 8.48 39.69 3.01
1943 7443 2.737252 AGCAAGGATTTCGTCGAAGAAC 59.263 45.455 13.50 3.39 39.69 3.01
1944 7444 2.993899 GAGCAAGGATTTCGTCGAAGAA 59.006 45.455 9.84 9.84 39.69 2.52
1945 7445 2.607187 GAGCAAGGATTTCGTCGAAGA 58.393 47.619 7.86 0.00 0.00 2.87
1946 7446 1.321743 CGAGCAAGGATTTCGTCGAAG 59.678 52.381 7.86 0.00 0.00 3.79
1947 7447 1.346365 CGAGCAAGGATTTCGTCGAA 58.654 50.000 2.90 2.90 0.00 3.71
1948 7448 0.457853 CCGAGCAAGGATTTCGTCGA 60.458 55.000 0.00 0.00 32.73 4.20
1949 7449 0.736325 ACCGAGCAAGGATTTCGTCG 60.736 55.000 4.39 0.00 32.73 5.12
1950 7450 1.393883 GAACCGAGCAAGGATTTCGTC 59.606 52.381 4.39 0.00 32.73 4.20
1951 7451 1.270625 TGAACCGAGCAAGGATTTCGT 60.271 47.619 4.39 0.00 32.73 3.85
1952 7452 1.438651 TGAACCGAGCAAGGATTTCG 58.561 50.000 4.39 0.00 34.73 3.46
1953 7453 3.002759 GCTATGAACCGAGCAAGGATTTC 59.997 47.826 4.39 0.08 38.62 2.17
1954 7454 2.945668 GCTATGAACCGAGCAAGGATTT 59.054 45.455 4.39 0.00 38.62 2.17
1955 7455 2.092968 TGCTATGAACCGAGCAAGGATT 60.093 45.455 4.39 0.00 45.47 3.01
1956 7456 1.486310 TGCTATGAACCGAGCAAGGAT 59.514 47.619 4.39 0.00 45.47 3.24
1957 7457 0.901827 TGCTATGAACCGAGCAAGGA 59.098 50.000 4.39 0.00 45.47 3.36
1958 7458 3.458872 TGCTATGAACCGAGCAAGG 57.541 52.632 0.00 0.00 45.47 3.61
1961 7461 3.194861 GTTATGTGCTATGAACCGAGCA 58.805 45.455 0.00 0.00 46.24 4.26
1962 7462 2.544267 GGTTATGTGCTATGAACCGAGC 59.456 50.000 0.00 0.00 39.25 5.03
1963 7463 3.131396 GGGTTATGTGCTATGAACCGAG 58.869 50.000 0.00 0.00 41.94 4.63
1964 7464 2.158871 GGGGTTATGTGCTATGAACCGA 60.159 50.000 0.00 0.00 41.94 4.69
1965 7465 2.218603 GGGGTTATGTGCTATGAACCG 58.781 52.381 0.00 0.00 41.94 4.44
1966 7466 3.214328 CTGGGGTTATGTGCTATGAACC 58.786 50.000 0.00 0.00 40.58 3.62
1967 7467 2.618709 GCTGGGGTTATGTGCTATGAAC 59.381 50.000 0.00 0.00 0.00 3.18
1968 7468 2.744823 CGCTGGGGTTATGTGCTATGAA 60.745 50.000 0.00 0.00 0.00 2.57
1969 7469 1.202639 CGCTGGGGTTATGTGCTATGA 60.203 52.381 0.00 0.00 0.00 2.15
1970 7470 1.229428 CGCTGGGGTTATGTGCTATG 58.771 55.000 0.00 0.00 0.00 2.23
1971 7471 0.108585 CCGCTGGGGTTATGTGCTAT 59.891 55.000 1.98 0.00 0.00 2.97
1972 7472 1.524961 CCGCTGGGGTTATGTGCTA 59.475 57.895 1.98 0.00 0.00 3.49
1973 7473 2.272146 CCGCTGGGGTTATGTGCT 59.728 61.111 1.98 0.00 0.00 4.40
1988 7488 4.923942 ATGATGAGCGCCTGCCCG 62.924 66.667 2.29 0.00 44.31 6.13
1989 7489 2.976903 GATGATGAGCGCCTGCCC 60.977 66.667 2.29 0.00 44.31 5.36
1990 7490 1.960250 GAGATGATGAGCGCCTGCC 60.960 63.158 2.29 0.00 44.31 4.85
1991 7491 1.960250 GGAGATGATGAGCGCCTGC 60.960 63.158 2.29 0.00 43.24 4.85
1992 7492 0.879400 GTGGAGATGATGAGCGCCTG 60.879 60.000 2.29 0.00 0.00 4.85
1993 7493 1.445095 GTGGAGATGATGAGCGCCT 59.555 57.895 2.29 0.00 0.00 5.52
1994 7494 1.953138 CGTGGAGATGATGAGCGCC 60.953 63.158 2.29 0.00 0.00 6.53
1995 7495 1.953138 CCGTGGAGATGATGAGCGC 60.953 63.158 0.00 0.00 0.00 5.92
1996 7496 0.596083 GACCGTGGAGATGATGAGCG 60.596 60.000 0.00 0.00 0.00 5.03
1997 7497 0.596083 CGACCGTGGAGATGATGAGC 60.596 60.000 0.00 0.00 0.00 4.26
1998 7498 0.596083 GCGACCGTGGAGATGATGAG 60.596 60.000 0.00 0.00 0.00 2.90
1999 7499 1.437573 GCGACCGTGGAGATGATGA 59.562 57.895 0.00 0.00 0.00 2.92
2000 7500 1.592669 GGCGACCGTGGAGATGATG 60.593 63.158 0.00 0.00 0.00 3.07
2001 7501 2.815308 GGCGACCGTGGAGATGAT 59.185 61.111 0.00 0.00 0.00 2.45
2002 7502 3.822192 CGGCGACCGTGGAGATGA 61.822 66.667 0.00 0.00 42.73 2.92
2003 7503 4.873129 CCGGCGACCGTGGAGATG 62.873 72.222 9.30 0.00 46.80 2.90
2017 7517 2.421739 CGAAGTAGGCCATCCCGG 59.578 66.667 5.01 0.00 39.21 5.73
2018 7518 3.217231 ACGAAGTAGGCCATCCCG 58.783 61.111 5.01 4.12 41.94 5.14
2037 7537 1.810030 GGATGGTCTTGTCGGCGAC 60.810 63.158 31.68 31.68 0.00 5.19
2038 7538 1.945354 GAGGATGGTCTTGTCGGCGA 61.945 60.000 4.99 4.99 0.00 5.54
2039 7539 1.519455 GAGGATGGTCTTGTCGGCG 60.519 63.158 0.00 0.00 0.00 6.46
2040 7540 0.179097 GAGAGGATGGTCTTGTCGGC 60.179 60.000 0.00 0.00 0.00 5.54
2041 7541 0.461961 GGAGAGGATGGTCTTGTCGG 59.538 60.000 0.00 0.00 0.00 4.79
2042 7542 1.186200 TGGAGAGGATGGTCTTGTCG 58.814 55.000 0.00 0.00 0.00 4.35
2043 7543 2.158842 CCATGGAGAGGATGGTCTTGTC 60.159 54.545 5.56 0.00 36.38 3.18
2044 7544 1.842562 CCATGGAGAGGATGGTCTTGT 59.157 52.381 5.56 0.00 36.38 3.16
2045 7545 1.476471 GCCATGGAGAGGATGGTCTTG 60.476 57.143 18.40 0.00 42.25 3.02
2046 7546 0.842635 GCCATGGAGAGGATGGTCTT 59.157 55.000 18.40 0.00 42.25 3.01
2047 7547 1.059006 GGCCATGGAGAGGATGGTCT 61.059 60.000 18.40 0.00 41.62 3.85
2048 7548 1.348008 TGGCCATGGAGAGGATGGTC 61.348 60.000 18.40 0.00 44.58 4.02
2049 7549 1.308128 TGGCCATGGAGAGGATGGT 60.308 57.895 18.40 0.00 42.25 3.55
2050 7550 1.454976 CTGGCCATGGAGAGGATGG 59.545 63.158 18.40 0.00 43.01 3.51
2051 7551 1.058428 TCCTGGCCATGGAGAGGATG 61.058 60.000 22.48 4.17 29.25 3.51
2052 7552 0.327867 TTCCTGGCCATGGAGAGGAT 60.328 55.000 25.36 0.00 34.53 3.24
2053 7553 0.984961 CTTCCTGGCCATGGAGAGGA 60.985 60.000 22.48 22.48 34.76 3.71
2054 7554 1.530771 CTTCCTGGCCATGGAGAGG 59.469 63.158 18.40 18.92 34.76 3.69
2055 7555 1.153005 GCTTCCTGGCCATGGAGAG 60.153 63.158 19.85 18.84 34.76 3.20
2056 7556 1.924939 TGCTTCCTGGCCATGGAGA 60.925 57.895 19.85 5.70 34.76 3.71
2057 7557 1.751927 GTGCTTCCTGGCCATGGAG 60.752 63.158 18.40 16.14 34.76 3.86
2058 7558 2.202236 GAGTGCTTCCTGGCCATGGA 62.202 60.000 18.40 17.12 0.00 3.41
2059 7559 1.751927 GAGTGCTTCCTGGCCATGG 60.752 63.158 5.51 7.63 0.00 3.66
2060 7560 1.751927 GGAGTGCTTCCTGGCCATG 60.752 63.158 5.51 2.84 43.16 3.66
2061 7561 2.679716 GGAGTGCTTCCTGGCCAT 59.320 61.111 5.51 0.00 43.16 4.40
2077 7577 3.685548 GTGCTCTCACGTCCTGGAAGG 62.686 61.905 14.14 4.63 44.59 3.46
2078 7578 0.389166 GTGCTCTCACGTCCTGGAAG 60.389 60.000 8.14 8.14 32.98 3.46
2079 7579 1.666011 GTGCTCTCACGTCCTGGAA 59.334 57.895 0.00 0.00 32.98 3.53
2080 7580 2.276116 GGTGCTCTCACGTCCTGGA 61.276 63.158 0.00 0.00 44.03 3.86
2081 7581 2.219325 GAGGTGCTCTCACGTCCTGG 62.219 65.000 6.81 0.00 46.68 4.45
2082 7582 1.214062 GAGGTGCTCTCACGTCCTG 59.786 63.158 6.81 0.00 46.68 3.86
2083 7583 3.688086 GAGGTGCTCTCACGTCCT 58.312 61.111 6.81 0.00 46.68 3.85
2090 7590 1.346068 AGGTGTTCTTGAGGTGCTCTC 59.654 52.381 0.00 1.50 42.74 3.20
2091 7591 1.346068 GAGGTGTTCTTGAGGTGCTCT 59.654 52.381 0.00 0.00 0.00 4.09
2092 7592 1.609320 GGAGGTGTTCTTGAGGTGCTC 60.609 57.143 0.00 0.00 0.00 4.26
2093 7593 0.398318 GGAGGTGTTCTTGAGGTGCT 59.602 55.000 0.00 0.00 0.00 4.40
2094 7594 0.398318 AGGAGGTGTTCTTGAGGTGC 59.602 55.000 0.00 0.00 0.00 5.01
2095 7595 2.551071 GGAAGGAGGTGTTCTTGAGGTG 60.551 54.545 0.00 0.00 0.00 4.00
2096 7596 1.700186 GGAAGGAGGTGTTCTTGAGGT 59.300 52.381 0.00 0.00 0.00 3.85
2097 7597 1.699634 TGGAAGGAGGTGTTCTTGAGG 59.300 52.381 0.00 0.00 0.00 3.86
2098 7598 2.370189 AGTGGAAGGAGGTGTTCTTGAG 59.630 50.000 0.00 0.00 0.00 3.02
2099 7599 2.408565 AGTGGAAGGAGGTGTTCTTGA 58.591 47.619 0.00 0.00 0.00 3.02
2100 7600 2.938956 AGTGGAAGGAGGTGTTCTTG 57.061 50.000 0.00 0.00 0.00 3.02
2101 7601 3.974642 ACTTAGTGGAAGGAGGTGTTCTT 59.025 43.478 0.00 0.00 39.74 2.52
2102 7602 3.588569 ACTTAGTGGAAGGAGGTGTTCT 58.411 45.455 0.00 0.00 39.74 3.01
2103 7603 4.621038 GCTACTTAGTGGAAGGAGGTGTTC 60.621 50.000 0.00 0.00 45.37 3.18
2104 7604 3.261137 GCTACTTAGTGGAAGGAGGTGTT 59.739 47.826 0.00 0.00 45.37 3.32
2105 7605 2.832733 GCTACTTAGTGGAAGGAGGTGT 59.167 50.000 0.00 0.00 45.37 4.16
2106 7606 2.168728 GGCTACTTAGTGGAAGGAGGTG 59.831 54.545 0.00 0.00 45.37 4.00
2107 7607 2.044630 AGGCTACTTAGTGGAAGGAGGT 59.955 50.000 0.00 0.00 45.37 3.85
2108 7608 2.753247 AGGCTACTTAGTGGAAGGAGG 58.247 52.381 0.00 0.00 45.37 4.30
2110 7610 8.676020 TCTATTATAGGCTACTTAGTGGAAGGA 58.324 37.037 0.00 0.00 39.74 3.36
2111 7611 8.880991 TCTATTATAGGCTACTTAGTGGAAGG 57.119 38.462 0.00 0.00 39.74 3.46
2113 7613 9.476928 GGATCTATTATAGGCTACTTAGTGGAA 57.523 37.037 0.00 0.00 0.00 3.53
2114 7614 8.621073 TGGATCTATTATAGGCTACTTAGTGGA 58.379 37.037 0.00 0.00 0.00 4.02
2115 7615 8.824756 TGGATCTATTATAGGCTACTTAGTGG 57.175 38.462 0.00 0.00 0.00 4.00
2195 7695 2.670905 TCGTGGTTCGCTGAACATTATG 59.329 45.455 18.49 11.59 43.54 1.90
2210 7710 0.246635 GCAGTACACCTGATCGTGGT 59.753 55.000 4.58 4.58 44.49 4.16
2239 8030 2.099141 AATTAGTGCTTGCTCGCAGA 57.901 45.000 0.68 0.00 41.21 4.26
2240 8031 3.806521 AGATAATTAGTGCTTGCTCGCAG 59.193 43.478 0.68 0.00 41.21 5.18
2241 8032 3.557185 CAGATAATTAGTGCTTGCTCGCA 59.443 43.478 0.00 0.00 37.62 5.10
2242 8033 3.804325 TCAGATAATTAGTGCTTGCTCGC 59.196 43.478 0.00 0.00 0.00 5.03
2243 8034 5.693555 TCATCAGATAATTAGTGCTTGCTCG 59.306 40.000 0.00 0.00 0.00 5.03
2244 8035 7.172875 ACATCATCAGATAATTAGTGCTTGCTC 59.827 37.037 0.00 0.00 31.88 4.26
2245 8036 6.996879 ACATCATCAGATAATTAGTGCTTGCT 59.003 34.615 0.00 0.00 31.88 3.91
2246 8037 7.199541 ACATCATCAGATAATTAGTGCTTGC 57.800 36.000 0.00 0.00 31.88 4.01
2248 8039 9.445878 CCATACATCATCAGATAATTAGTGCTT 57.554 33.333 0.00 0.00 31.88 3.91
2249 8040 8.819845 TCCATACATCATCAGATAATTAGTGCT 58.180 33.333 0.00 0.00 31.88 4.40
2250 8041 9.440773 TTCCATACATCATCAGATAATTAGTGC 57.559 33.333 0.00 0.00 31.88 4.40
2258 8049 9.895138 CCACATTATTCCATACATCATCAGATA 57.105 33.333 0.00 0.00 31.88 1.98
2259 8050 8.388589 ACCACATTATTCCATACATCATCAGAT 58.611 33.333 0.00 0.00 33.87 2.90
2266 8057 6.432162 AGCATGACCACATTATTCCATACATC 59.568 38.462 0.00 0.00 34.15 3.06
2325 8116 7.947782 ATATTTTGGGACAGAGGGAGTATTA 57.052 36.000 0.00 0.00 42.39 0.98
2326 8117 6.848562 ATATTTTGGGACAGAGGGAGTATT 57.151 37.500 0.00 0.00 42.39 1.89
2327 8118 7.794683 TCTTATATTTTGGGACAGAGGGAGTAT 59.205 37.037 0.00 0.00 42.39 2.12
2328 8119 7.136885 TCTTATATTTTGGGACAGAGGGAGTA 58.863 38.462 0.00 0.00 42.39 2.59
2329 8120 5.970640 TCTTATATTTTGGGACAGAGGGAGT 59.029 40.000 0.00 0.00 42.39 3.85
2330 8121 6.500589 TCTTATATTTTGGGACAGAGGGAG 57.499 41.667 0.00 0.00 42.39 4.30
2331 8122 6.631766 CGTTCTTATATTTTGGGACAGAGGGA 60.632 42.308 0.00 0.00 42.39 4.20
2332 8123 5.527582 CGTTCTTATATTTTGGGACAGAGGG 59.472 44.000 0.00 0.00 42.39 4.30
2333 8124 6.113411 ACGTTCTTATATTTTGGGACAGAGG 58.887 40.000 0.00 0.00 42.39 3.69
2334 8125 7.611213 AACGTTCTTATATTTTGGGACAGAG 57.389 36.000 0.00 0.00 42.39 3.35
2335 8126 7.881232 AGAAACGTTCTTATATTTTGGGACAGA 59.119 33.333 0.00 0.00 36.52 3.41
2336 8127 8.040716 AGAAACGTTCTTATATTTTGGGACAG 57.959 34.615 0.00 0.00 36.52 3.51
2337 8128 7.989416 AGAAACGTTCTTATATTTTGGGACA 57.011 32.000 0.00 0.00 36.36 4.02
2351 8142 6.927381 CCGTCCCATAATATAAGAAACGTTCT 59.073 38.462 0.00 0.00 43.15 3.01
2352 8143 6.925165 TCCGTCCCATAATATAAGAAACGTTC 59.075 38.462 0.00 0.00 0.00 3.95
2353 8144 6.819284 TCCGTCCCATAATATAAGAAACGTT 58.181 36.000 0.00 0.00 0.00 3.99
2354 8145 6.409524 TCCGTCCCATAATATAAGAAACGT 57.590 37.500 0.00 0.00 0.00 3.99
2355 8146 5.867716 CCTCCGTCCCATAATATAAGAAACG 59.132 44.000 0.00 0.00 0.00 3.60
2356 8147 6.013984 TCCCTCCGTCCCATAATATAAGAAAC 60.014 42.308 0.00 0.00 0.00 2.78
2357 8148 6.086095 TCCCTCCGTCCCATAATATAAGAAA 58.914 40.000 0.00 0.00 0.00 2.52
2358 8149 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
2359 8150 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
2360 8151 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
2361 8152 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
2362 8153 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
2363 8154 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
2364 8155 4.154942 GTTACTCCCTCCGTCCCATAATA 58.845 47.826 0.00 0.00 0.00 0.98
2365 8156 2.970640 GTTACTCCCTCCGTCCCATAAT 59.029 50.000 0.00 0.00 0.00 1.28
2366 8157 2.292389 TGTTACTCCCTCCGTCCCATAA 60.292 50.000 0.00 0.00 0.00 1.90
2367 8158 1.288633 TGTTACTCCCTCCGTCCCATA 59.711 52.381 0.00 0.00 0.00 2.74
2368 8159 0.042131 TGTTACTCCCTCCGTCCCAT 59.958 55.000 0.00 0.00 0.00 4.00
2369 8160 0.178926 TTGTTACTCCCTCCGTCCCA 60.179 55.000 0.00 0.00 0.00 4.37
2370 8161 0.248565 GTTGTTACTCCCTCCGTCCC 59.751 60.000 0.00 0.00 0.00 4.46
2371 8162 1.264295 AGTTGTTACTCCCTCCGTCC 58.736 55.000 0.00 0.00 0.00 4.79
2372 8163 3.350833 TCTAGTTGTTACTCCCTCCGTC 58.649 50.000 0.00 0.00 35.78 4.79
2373 8164 3.446442 TCTAGTTGTTACTCCCTCCGT 57.554 47.619 0.00 0.00 35.78 4.69
2374 8165 3.762823 ACTTCTAGTTGTTACTCCCTCCG 59.237 47.826 0.00 0.00 35.78 4.63
2375 8166 5.951148 AGTACTTCTAGTTGTTACTCCCTCC 59.049 44.000 0.00 0.00 35.78 4.30
2376 8167 6.433716 ACAGTACTTCTAGTTGTTACTCCCTC 59.566 42.308 0.00 0.00 35.78 4.30
2377 8168 6.313324 ACAGTACTTCTAGTTGTTACTCCCT 58.687 40.000 0.00 0.00 35.78 4.20
2378 8169 6.587206 ACAGTACTTCTAGTTGTTACTCCC 57.413 41.667 0.00 0.00 35.78 4.30
2379 8170 7.924947 ACAAACAGTACTTCTAGTTGTTACTCC 59.075 37.037 0.00 0.00 30.39 3.85
2380 8171 8.868635 ACAAACAGTACTTCTAGTTGTTACTC 57.131 34.615 0.00 0.00 30.39 2.59
2400 8191 4.124238 TGCACCAGAGTTGTAGTACAAAC 58.876 43.478 17.16 13.70 40.15 2.93
2533 8325 3.371102 TTTCGTGACAGAACAGAGGAG 57.629 47.619 0.00 0.00 0.00 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.