Multiple sequence alignment - TraesCS7D01G088400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G088400 chr7D 100.000 3108 0 0 1 3108 53641993 53638886 0.000000e+00 5740.0
1 TraesCS7D01G088400 chr7D 88.559 1180 113 12 1019 2190 45065992 45064827 0.000000e+00 1411.0
2 TraesCS7D01G088400 chr7D 85.363 731 82 18 1025 1747 54201187 54200474 0.000000e+00 734.0
3 TraesCS7D01G088400 chr7D 78.927 783 131 26 1045 1815 181976317 181975557 4.630000e-138 501.0
4 TraesCS7D01G088400 chr7D 89.474 304 32 0 1447 1750 24336745 24337048 4.860000e-103 385.0
5 TraesCS7D01G088400 chr7D 90.169 295 29 0 1456 1750 24338673 24338967 4.860000e-103 385.0
6 TraesCS7D01G088400 chr7D 83.186 339 45 12 1033 1368 182326789 182326460 1.810000e-77 300.0
7 TraesCS7D01G088400 chr7D 96.491 171 6 0 1 171 583063331 583063501 1.820000e-72 283.0
8 TraesCS7D01G088400 chr7D 95.906 171 7 0 1 171 627225849 627225679 8.490000e-71 278.0
9 TraesCS7D01G088400 chr7D 94.595 37 1 1 725 760 311886319 311886355 4.330000e-04 56.5
10 TraesCS7D01G088400 chr4D 90.968 919 72 7 2194 3103 32771414 32770498 0.000000e+00 1227.0
11 TraesCS7D01G088400 chr4D 89.310 898 82 10 2210 3097 431733949 431734842 0.000000e+00 1114.0
12 TraesCS7D01G088400 chr6D 90.471 913 74 9 2202 3103 137122355 137121445 0.000000e+00 1192.0
13 TraesCS7D01G088400 chr6D 88.840 905 90 8 2203 3097 351928364 351929267 0.000000e+00 1101.0
14 TraesCS7D01G088400 chr6D 93.688 507 19 4 167 671 450505192 450505687 0.000000e+00 747.0
15 TraesCS7D01G088400 chr6D 97.041 169 5 0 1 169 310520551 310520383 5.070000e-73 285.0
16 TraesCS7D01G088400 chr6D 94.286 70 4 0 683 752 450505674 450505743 1.180000e-19 108.0
17 TraesCS7D01G088400 chr2D 90.319 909 76 8 2205 3103 377500487 377501393 0.000000e+00 1181.0
18 TraesCS7D01G088400 chr2D 89.000 900 85 11 2203 3091 187619176 187620072 0.000000e+00 1101.0
19 TraesCS7D01G088400 chr2D 88.462 910 93 8 2203 3101 386839720 386840628 0.000000e+00 1088.0
20 TraesCS7D01G088400 chr2D 91.749 509 18 8 167 671 629252565 629253053 0.000000e+00 686.0
21 TraesCS7D01G088400 chr2D 97.619 168 4 0 1 168 386133703 386133870 3.920000e-74 289.0
22 TraesCS7D01G088400 chr1D 89.416 907 83 8 2203 3100 456251406 456250504 0.000000e+00 1131.0
23 TraesCS7D01G088400 chr1D 100.000 28 0 0 725 752 155855601 155855574 6.000000e-03 52.8
24 TraesCS7D01G088400 chr1B 89.282 905 86 10 2203 3100 429705097 429705997 0.000000e+00 1123.0
25 TraesCS7D01G088400 chr1B 82.857 70 5 5 698 766 161492281 161492344 4.330000e-04 56.5
26 TraesCS7D01G088400 chr7A 95.266 507 22 2 167 671 611357613 611357107 0.000000e+00 802.0
27 TraesCS7D01G088400 chr7A 85.204 784 79 27 973 1747 57707419 57706664 0.000000e+00 771.0
28 TraesCS7D01G088400 chr7A 97.024 168 5 0 1 168 58980621 58980788 1.820000e-72 283.0
29 TraesCS7D01G088400 chr7A 81.306 337 53 10 1034 1368 189433931 189434259 6.610000e-67 265.0
30 TraesCS7D01G088400 chr7A 89.855 69 4 1 684 752 611357119 611357054 5.520000e-13 86.1
31 TraesCS7D01G088400 chr4A 83.979 774 100 20 982 1753 707263634 707262883 0.000000e+00 721.0
32 TraesCS7D01G088400 chr4A 85.263 665 85 5 1498 2162 668377919 668377268 0.000000e+00 673.0
33 TraesCS7D01G088400 chr4A 81.028 564 64 28 1025 1575 669861012 669860479 2.890000e-110 409.0
34 TraesCS7D01G088400 chr7B 78.030 792 139 24 1045 1815 150188533 150187756 1.690000e-127 466.0
35 TraesCS7D01G088400 chr7B 82.596 339 47 12 1033 1368 150543077 150542748 3.920000e-74 289.0
36 TraesCS7D01G088400 chr7B 94.595 37 1 1 725 760 296328179 296328143 4.330000e-04 56.5
37 TraesCS7D01G088400 chr4B 97.041 169 5 0 1 169 672301105 672301273 5.070000e-73 285.0
38 TraesCS7D01G088400 chr4B 85.000 60 4 2 695 754 363405239 363405293 4.330000e-04 56.5
39 TraesCS7D01G088400 chr5B 97.024 168 5 0 1 168 382381486 382381653 1.820000e-72 283.0
40 TraesCS7D01G088400 chr2B 96.450 169 6 0 1 169 378461 378293 2.360000e-71 279.0
41 TraesCS7D01G088400 chrUn 95.906 171 7 0 1 171 5640 5810 8.490000e-71 278.0
42 TraesCS7D01G088400 chr6A 87.037 54 3 2 699 752 136010642 136010691 1.200000e-04 58.4
43 TraesCS7D01G088400 chr5A 100.000 30 0 0 725 754 675954239 675954268 4.330000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G088400 chr7D 53638886 53641993 3107 True 5740.00 5740 100.0000 1 3108 1 chr7D.!!$R2 3107
1 TraesCS7D01G088400 chr7D 45064827 45065992 1165 True 1411.00 1411 88.5590 1019 2190 1 chr7D.!!$R1 1171
2 TraesCS7D01G088400 chr7D 54200474 54201187 713 True 734.00 734 85.3630 1025 1747 1 chr7D.!!$R3 722
3 TraesCS7D01G088400 chr7D 181975557 181976317 760 True 501.00 501 78.9270 1045 1815 1 chr7D.!!$R4 770
4 TraesCS7D01G088400 chr7D 24336745 24338967 2222 False 385.00 385 89.8215 1447 1750 2 chr7D.!!$F3 303
5 TraesCS7D01G088400 chr4D 32770498 32771414 916 True 1227.00 1227 90.9680 2194 3103 1 chr4D.!!$R1 909
6 TraesCS7D01G088400 chr4D 431733949 431734842 893 False 1114.00 1114 89.3100 2210 3097 1 chr4D.!!$F1 887
7 TraesCS7D01G088400 chr6D 137121445 137122355 910 True 1192.00 1192 90.4710 2202 3103 1 chr6D.!!$R1 901
8 TraesCS7D01G088400 chr6D 351928364 351929267 903 False 1101.00 1101 88.8400 2203 3097 1 chr6D.!!$F1 894
9 TraesCS7D01G088400 chr6D 450505192 450505743 551 False 427.50 747 93.9870 167 752 2 chr6D.!!$F2 585
10 TraesCS7D01G088400 chr2D 377500487 377501393 906 False 1181.00 1181 90.3190 2205 3103 1 chr2D.!!$F2 898
11 TraesCS7D01G088400 chr2D 187619176 187620072 896 False 1101.00 1101 89.0000 2203 3091 1 chr2D.!!$F1 888
12 TraesCS7D01G088400 chr2D 386839720 386840628 908 False 1088.00 1088 88.4620 2203 3101 1 chr2D.!!$F4 898
13 TraesCS7D01G088400 chr1D 456250504 456251406 902 True 1131.00 1131 89.4160 2203 3100 1 chr1D.!!$R2 897
14 TraesCS7D01G088400 chr1B 429705097 429705997 900 False 1123.00 1123 89.2820 2203 3100 1 chr1B.!!$F2 897
15 TraesCS7D01G088400 chr7A 57706664 57707419 755 True 771.00 771 85.2040 973 1747 1 chr7A.!!$R1 774
16 TraesCS7D01G088400 chr7A 611357054 611357613 559 True 444.05 802 92.5605 167 752 2 chr7A.!!$R2 585
17 TraesCS7D01G088400 chr4A 707262883 707263634 751 True 721.00 721 83.9790 982 1753 1 chr4A.!!$R3 771
18 TraesCS7D01G088400 chr4A 668377268 668377919 651 True 673.00 673 85.2630 1498 2162 1 chr4A.!!$R1 664
19 TraesCS7D01G088400 chr4A 669860479 669861012 533 True 409.00 409 81.0280 1025 1575 1 chr4A.!!$R2 550
20 TraesCS7D01G088400 chr7B 150187756 150188533 777 True 466.00 466 78.0300 1045 1815 1 chr7B.!!$R1 770

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
53 54 0.030504 TTCGTTGCATGCTTGTGGTG 59.969 50.0 20.33 1.97 0.00 4.17 F
796 803 0.034896 GGCATCAATATCCGTCCGGT 59.965 55.0 0.00 0.00 36.47 5.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1765 1949 0.038251 TGTACTCAACGCAGAGGCTG 60.038 55.0 9.22 0.00 39.97 4.85 R
2409 3207 0.100146 GTACCTAACGTAGCTGCGCT 59.900 55.0 24.60 15.11 43.41 5.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.245531 TCATAATGACACTCAACCACTTCC 58.754 41.667 0.00 0.00 0.00 3.46
24 25 3.864789 AATGACACTCAACCACTTCCT 57.135 42.857 0.00 0.00 0.00 3.36
25 26 3.864789 ATGACACTCAACCACTTCCTT 57.135 42.857 0.00 0.00 0.00 3.36
26 27 3.194005 TGACACTCAACCACTTCCTTC 57.806 47.619 0.00 0.00 0.00 3.46
27 28 2.158813 TGACACTCAACCACTTCCTTCC 60.159 50.000 0.00 0.00 0.00 3.46
28 29 1.143073 ACACTCAACCACTTCCTTCCC 59.857 52.381 0.00 0.00 0.00 3.97
29 30 1.142870 CACTCAACCACTTCCTTCCCA 59.857 52.381 0.00 0.00 0.00 4.37
30 31 2.065799 ACTCAACCACTTCCTTCCCAT 58.934 47.619 0.00 0.00 0.00 4.00
31 32 2.447047 ACTCAACCACTTCCTTCCCATT 59.553 45.455 0.00 0.00 0.00 3.16
32 33 3.084786 CTCAACCACTTCCTTCCCATTC 58.915 50.000 0.00 0.00 0.00 2.67
33 34 2.445145 TCAACCACTTCCTTCCCATTCA 59.555 45.455 0.00 0.00 0.00 2.57
34 35 3.075882 TCAACCACTTCCTTCCCATTCAT 59.924 43.478 0.00 0.00 0.00 2.57
35 36 3.833559 ACCACTTCCTTCCCATTCATT 57.166 42.857 0.00 0.00 0.00 2.57
36 37 3.701664 ACCACTTCCTTCCCATTCATTC 58.298 45.455 0.00 0.00 0.00 2.67
37 38 2.684881 CCACTTCCTTCCCATTCATTCG 59.315 50.000 0.00 0.00 0.00 3.34
38 39 3.347216 CACTTCCTTCCCATTCATTCGT 58.653 45.455 0.00 0.00 0.00 3.85
39 40 3.758554 CACTTCCTTCCCATTCATTCGTT 59.241 43.478 0.00 0.00 0.00 3.85
40 41 3.758554 ACTTCCTTCCCATTCATTCGTTG 59.241 43.478 0.00 0.00 0.00 4.10
41 42 2.091541 TCCTTCCCATTCATTCGTTGC 58.908 47.619 0.00 0.00 0.00 4.17
42 43 1.818060 CCTTCCCATTCATTCGTTGCA 59.182 47.619 0.00 0.00 0.00 4.08
43 44 2.428171 CCTTCCCATTCATTCGTTGCAT 59.572 45.455 0.00 0.00 0.00 3.96
44 45 3.441163 CTTCCCATTCATTCGTTGCATG 58.559 45.455 0.00 0.00 0.00 4.06
45 46 1.134753 TCCCATTCATTCGTTGCATGC 59.865 47.619 11.82 11.82 28.73 4.06
46 47 1.135527 CCCATTCATTCGTTGCATGCT 59.864 47.619 20.33 0.00 28.73 3.79
47 48 2.417651 CCCATTCATTCGTTGCATGCTT 60.418 45.455 20.33 0.00 28.73 3.91
48 49 2.601314 CCATTCATTCGTTGCATGCTTG 59.399 45.455 20.33 8.62 28.73 4.01
49 50 3.247442 CATTCATTCGTTGCATGCTTGT 58.753 40.909 20.33 0.00 0.00 3.16
50 51 2.334971 TCATTCGTTGCATGCTTGTG 57.665 45.000 20.33 9.14 0.00 3.33
51 52 1.068402 TCATTCGTTGCATGCTTGTGG 60.068 47.619 20.33 3.94 0.00 4.17
52 53 0.961019 ATTCGTTGCATGCTTGTGGT 59.039 45.000 20.33 0.00 0.00 4.16
53 54 0.030504 TTCGTTGCATGCTTGTGGTG 59.969 50.000 20.33 1.97 0.00 4.17
54 55 2.017783 CGTTGCATGCTTGTGGTGC 61.018 57.895 20.33 0.00 39.26 5.01
55 56 1.067749 GTTGCATGCTTGTGGTGCA 59.932 52.632 20.33 0.00 46.15 4.57
64 65 4.374843 TGCTTGTGGTGCATTAATGATC 57.625 40.909 19.73 10.16 35.31 2.92
65 66 3.130869 TGCTTGTGGTGCATTAATGATCC 59.869 43.478 19.73 18.13 35.31 3.36
66 67 3.491447 GCTTGTGGTGCATTAATGATCCC 60.491 47.826 19.73 14.06 0.00 3.85
67 68 2.296792 TGTGGTGCATTAATGATCCCG 58.703 47.619 19.73 0.00 0.00 5.14
68 69 1.608590 GTGGTGCATTAATGATCCCGG 59.391 52.381 19.73 0.00 0.00 5.73
69 70 1.214175 TGGTGCATTAATGATCCCGGT 59.786 47.619 19.73 0.00 0.00 5.28
70 71 2.306847 GGTGCATTAATGATCCCGGTT 58.693 47.619 19.73 0.00 0.00 4.44
71 72 3.117851 TGGTGCATTAATGATCCCGGTTA 60.118 43.478 19.73 1.80 0.00 2.85
72 73 3.886505 GGTGCATTAATGATCCCGGTTAA 59.113 43.478 19.73 0.00 0.00 2.01
73 74 4.261447 GGTGCATTAATGATCCCGGTTAAC 60.261 45.833 19.73 0.00 0.00 2.01
74 75 3.562141 TGCATTAATGATCCCGGTTAACG 59.438 43.478 19.73 0.00 43.80 3.18
92 93 7.881634 GGTTAACGAAAAGAAAAGTTGACTTG 58.118 34.615 0.00 0.00 36.12 3.16
93 94 7.381079 GTTAACGAAAAGAAAAGTTGACTTGC 58.619 34.615 0.00 0.00 36.12 4.01
94 95 5.054390 ACGAAAAGAAAAGTTGACTTGCA 57.946 34.783 0.00 0.00 36.12 4.08
95 96 5.465935 ACGAAAAGAAAAGTTGACTTGCAA 58.534 33.333 0.00 0.00 36.12 4.08
96 97 5.923684 ACGAAAAGAAAAGTTGACTTGCAAA 59.076 32.000 0.00 0.00 38.44 3.68
97 98 6.589907 ACGAAAAGAAAAGTTGACTTGCAAAT 59.410 30.769 0.00 0.00 38.44 2.32
98 99 6.896088 CGAAAAGAAAAGTTGACTTGCAAATG 59.104 34.615 0.00 0.00 38.44 2.32
99 100 7.201427 CGAAAAGAAAAGTTGACTTGCAAATGA 60.201 33.333 0.00 0.00 38.44 2.57
100 101 7.529880 AAAGAAAAGTTGACTTGCAAATGAG 57.470 32.000 0.00 0.00 38.44 2.90
101 102 6.212888 AGAAAAGTTGACTTGCAAATGAGT 57.787 33.333 0.00 0.00 38.44 3.41
102 103 6.268566 AGAAAAGTTGACTTGCAAATGAGTC 58.731 36.000 8.97 8.97 42.01 3.36
112 113 9.545105 TGACTTGCAAATGAGTCATTAAATTTT 57.455 25.926 18.56 0.01 45.26 1.82
138 139 8.964476 ATCTTGGTACCTGTAATATGAGTTTG 57.036 34.615 14.36 0.00 0.00 2.93
139 140 7.913789 TCTTGGTACCTGTAATATGAGTTTGT 58.086 34.615 14.36 0.00 0.00 2.83
140 141 7.822334 TCTTGGTACCTGTAATATGAGTTTGTG 59.178 37.037 14.36 0.00 0.00 3.33
141 142 6.411376 TGGTACCTGTAATATGAGTTTGTGG 58.589 40.000 14.36 0.00 0.00 4.17
142 143 5.296035 GGTACCTGTAATATGAGTTTGTGGC 59.704 44.000 4.06 0.00 0.00 5.01
143 144 4.270008 ACCTGTAATATGAGTTTGTGGCC 58.730 43.478 0.00 0.00 0.00 5.36
144 145 4.018415 ACCTGTAATATGAGTTTGTGGCCT 60.018 41.667 3.32 0.00 0.00 5.19
145 146 4.949856 CCTGTAATATGAGTTTGTGGCCTT 59.050 41.667 3.32 0.00 0.00 4.35
146 147 5.163622 CCTGTAATATGAGTTTGTGGCCTTG 60.164 44.000 3.32 0.00 0.00 3.61
147 148 5.321102 TGTAATATGAGTTTGTGGCCTTGT 58.679 37.500 3.32 0.00 0.00 3.16
148 149 6.477253 TGTAATATGAGTTTGTGGCCTTGTA 58.523 36.000 3.32 0.00 0.00 2.41
149 150 7.116075 TGTAATATGAGTTTGTGGCCTTGTAT 58.884 34.615 3.32 0.00 0.00 2.29
150 151 8.268605 TGTAATATGAGTTTGTGGCCTTGTATA 58.731 33.333 3.32 0.00 0.00 1.47
151 152 9.116067 GTAATATGAGTTTGTGGCCTTGTATAA 57.884 33.333 3.32 0.00 0.00 0.98
152 153 7.807977 ATATGAGTTTGTGGCCTTGTATAAG 57.192 36.000 3.32 0.00 0.00 1.73
261 263 1.613925 GTGAAAGTTCAGAAAGGGGCC 59.386 52.381 0.00 0.00 37.98 5.80
304 306 7.831753 TGTAACATTTGGTATGGTGGTAATTG 58.168 34.615 0.00 0.00 0.00 2.32
435 439 5.950320 TCTCCTTCCTAATCCTCATCCTA 57.050 43.478 0.00 0.00 0.00 2.94
443 447 4.846367 CCTAATCCTCATCCTATCCACCAA 59.154 45.833 0.00 0.00 0.00 3.67
476 480 5.278957 CCCAAATTCGATTTTTCTGTCACCT 60.279 40.000 2.62 0.00 0.00 4.00
577 581 1.300697 GGTGCTTTCGGAGACACGT 60.301 57.895 0.00 0.00 34.32 4.49
595 599 2.223377 ACGTGAATTGCCGAGAAGAAAC 59.777 45.455 0.00 0.00 0.00 2.78
611 618 0.966920 AAACGAGCCGGAGAGAGAAA 59.033 50.000 5.05 0.00 0.00 2.52
612 619 0.966920 AACGAGCCGGAGAGAGAAAA 59.033 50.000 5.05 0.00 0.00 2.29
613 620 0.966920 ACGAGCCGGAGAGAGAAAAA 59.033 50.000 5.05 0.00 0.00 1.94
657 664 3.614092 ACCACTAGCCATCACATTTCTG 58.386 45.455 0.00 0.00 0.00 3.02
658 665 3.264193 ACCACTAGCCATCACATTTCTGA 59.736 43.478 0.00 0.00 0.00 3.27
659 666 4.263462 ACCACTAGCCATCACATTTCTGAA 60.263 41.667 0.00 0.00 0.00 3.02
660 667 4.885907 CCACTAGCCATCACATTTCTGAAT 59.114 41.667 0.00 0.00 0.00 2.57
661 668 5.359009 CCACTAGCCATCACATTTCTGAATT 59.641 40.000 0.00 0.00 0.00 2.17
662 669 6.543465 CCACTAGCCATCACATTTCTGAATTA 59.457 38.462 0.00 0.00 0.00 1.40
663 670 7.230108 CCACTAGCCATCACATTTCTGAATTAT 59.770 37.037 0.00 0.00 0.00 1.28
664 671 9.276590 CACTAGCCATCACATTTCTGAATTATA 57.723 33.333 0.00 0.00 0.00 0.98
752 759 1.735571 CGCACGGGCATTAAACTAGTT 59.264 47.619 11.77 1.12 41.24 2.24
753 760 2.222953 CGCACGGGCATTAAACTAGTTC 60.223 50.000 11.77 0.00 41.24 3.01
754 761 2.745281 GCACGGGCATTAAACTAGTTCA 59.255 45.455 3.77 0.00 40.72 3.18
755 762 3.181510 GCACGGGCATTAAACTAGTTCAG 60.182 47.826 3.77 0.00 40.72 3.02
756 763 3.374058 CACGGGCATTAAACTAGTTCAGG 59.626 47.826 8.95 1.87 0.00 3.86
757 764 3.008704 ACGGGCATTAAACTAGTTCAGGT 59.991 43.478 8.95 0.00 0.00 4.00
758 765 4.223477 ACGGGCATTAAACTAGTTCAGGTA 59.777 41.667 8.95 0.00 0.00 3.08
759 766 5.180271 CGGGCATTAAACTAGTTCAGGTAA 58.820 41.667 8.95 4.32 0.00 2.85
760 767 5.644636 CGGGCATTAAACTAGTTCAGGTAAA 59.355 40.000 8.95 0.00 0.00 2.01
761 768 6.149807 CGGGCATTAAACTAGTTCAGGTAAAA 59.850 38.462 8.95 0.00 0.00 1.52
762 769 7.308710 CGGGCATTAAACTAGTTCAGGTAAAAA 60.309 37.037 8.95 0.00 0.00 1.94
763 770 8.027189 GGGCATTAAACTAGTTCAGGTAAAAAG 58.973 37.037 8.95 0.97 0.00 2.27
764 771 8.789762 GGCATTAAACTAGTTCAGGTAAAAAGA 58.210 33.333 8.95 0.00 0.00 2.52
765 772 9.827411 GCATTAAACTAGTTCAGGTAAAAAGAG 57.173 33.333 8.95 0.00 0.00 2.85
768 775 7.803279 AAACTAGTTCAGGTAAAAAGAGGTG 57.197 36.000 8.95 0.00 0.00 4.00
769 776 6.742559 ACTAGTTCAGGTAAAAAGAGGTGA 57.257 37.500 0.00 0.00 0.00 4.02
770 777 6.760291 ACTAGTTCAGGTAAAAAGAGGTGAG 58.240 40.000 0.00 0.00 0.00 3.51
771 778 5.632034 AGTTCAGGTAAAAAGAGGTGAGT 57.368 39.130 0.00 0.00 0.00 3.41
772 779 5.612351 AGTTCAGGTAAAAAGAGGTGAGTC 58.388 41.667 0.00 0.00 0.00 3.36
773 780 5.367060 AGTTCAGGTAAAAAGAGGTGAGTCT 59.633 40.000 0.00 0.00 0.00 3.24
774 781 5.888982 TCAGGTAAAAAGAGGTGAGTCTT 57.111 39.130 0.00 0.00 38.48 3.01
775 782 5.611374 TCAGGTAAAAAGAGGTGAGTCTTG 58.389 41.667 0.00 0.00 36.86 3.02
776 783 4.214332 CAGGTAAAAAGAGGTGAGTCTTGC 59.786 45.833 0.00 0.00 36.86 4.01
777 784 3.186613 GGTAAAAAGAGGTGAGTCTTGCG 59.813 47.826 0.00 0.00 36.86 4.85
778 785 1.884235 AAAAGAGGTGAGTCTTGCGG 58.116 50.000 0.00 0.00 36.86 5.69
779 786 0.603975 AAAGAGGTGAGTCTTGCGGC 60.604 55.000 0.00 0.00 36.86 6.53
780 787 1.758440 AAGAGGTGAGTCTTGCGGCA 61.758 55.000 0.00 0.00 35.37 5.69
781 788 1.078848 GAGGTGAGTCTTGCGGCAT 60.079 57.895 2.28 0.00 0.00 4.40
782 789 1.078848 AGGTGAGTCTTGCGGCATC 60.079 57.895 2.28 0.00 0.00 3.91
783 790 1.375908 GGTGAGTCTTGCGGCATCA 60.376 57.895 2.28 0.99 0.00 3.07
784 791 0.955428 GGTGAGTCTTGCGGCATCAA 60.955 55.000 2.28 0.00 0.00 2.57
785 792 1.089920 GTGAGTCTTGCGGCATCAAT 58.910 50.000 2.28 0.00 0.00 2.57
786 793 2.279741 GTGAGTCTTGCGGCATCAATA 58.720 47.619 2.28 0.00 0.00 1.90
787 794 2.874701 GTGAGTCTTGCGGCATCAATAT 59.125 45.455 2.28 0.00 0.00 1.28
788 795 3.059325 GTGAGTCTTGCGGCATCAATATC 60.059 47.826 2.28 0.00 0.00 1.63
789 796 2.481952 GAGTCTTGCGGCATCAATATCC 59.518 50.000 2.28 0.00 0.00 2.59
790 797 1.195448 GTCTTGCGGCATCAATATCCG 59.805 52.381 2.28 0.00 45.46 4.18
791 798 1.202639 TCTTGCGGCATCAATATCCGT 60.203 47.619 2.28 0.00 44.58 4.69
792 799 1.195448 CTTGCGGCATCAATATCCGTC 59.805 52.381 2.28 0.00 44.58 4.79
793 800 0.602638 TGCGGCATCAATATCCGTCC 60.603 55.000 0.00 0.00 44.58 4.79
794 801 1.626654 GCGGCATCAATATCCGTCCG 61.627 60.000 0.00 0.00 44.58 4.79
795 802 1.014044 CGGCATCAATATCCGTCCGG 61.014 60.000 0.00 0.00 38.47 5.14
796 803 0.034896 GGCATCAATATCCGTCCGGT 59.965 55.000 0.00 0.00 36.47 5.28
797 804 1.429463 GCATCAATATCCGTCCGGTC 58.571 55.000 0.00 0.00 36.47 4.79
798 805 1.939838 GCATCAATATCCGTCCGGTCC 60.940 57.143 0.00 0.00 36.47 4.46
799 806 0.601558 ATCAATATCCGTCCGGTCCG 59.398 55.000 3.60 3.60 36.47 4.79
809 816 2.108362 CCGGTCCGGCCTGTAATC 59.892 66.667 19.48 0.00 41.17 1.75
810 817 2.727392 CCGGTCCGGCCTGTAATCA 61.727 63.158 19.48 0.00 41.17 2.57
811 818 1.219664 CGGTCCGGCCTGTAATCAA 59.780 57.895 2.34 0.00 34.25 2.57
812 819 0.179056 CGGTCCGGCCTGTAATCAAT 60.179 55.000 2.34 0.00 34.25 2.57
813 820 1.594331 GGTCCGGCCTGTAATCAATC 58.406 55.000 0.00 0.00 0.00 2.67
814 821 1.217882 GTCCGGCCTGTAATCAATCG 58.782 55.000 0.00 0.00 0.00 3.34
815 822 0.828022 TCCGGCCTGTAATCAATCGT 59.172 50.000 0.00 0.00 0.00 3.73
816 823 1.208535 TCCGGCCTGTAATCAATCGTT 59.791 47.619 0.00 0.00 0.00 3.85
817 824 1.330521 CCGGCCTGTAATCAATCGTTG 59.669 52.381 0.00 0.00 0.00 4.10
818 825 2.276201 CGGCCTGTAATCAATCGTTGA 58.724 47.619 0.00 3.49 45.01 3.18
819 826 2.030457 CGGCCTGTAATCAATCGTTGAC 59.970 50.000 0.00 0.00 43.48 3.18
820 827 3.270877 GGCCTGTAATCAATCGTTGACT 58.729 45.455 0.00 0.00 43.48 3.41
821 828 3.063997 GGCCTGTAATCAATCGTTGACTG 59.936 47.826 0.00 0.00 43.48 3.51
822 829 3.932710 GCCTGTAATCAATCGTTGACTGA 59.067 43.478 3.13 0.00 43.48 3.41
823 830 4.572389 GCCTGTAATCAATCGTTGACTGAT 59.428 41.667 3.13 0.00 43.48 2.90
824 831 5.503031 GCCTGTAATCAATCGTTGACTGATG 60.503 44.000 3.13 0.00 43.48 3.07
825 832 5.812127 CCTGTAATCAATCGTTGACTGATGA 59.188 40.000 3.13 0.00 43.48 2.92
826 833 6.481313 CCTGTAATCAATCGTTGACTGATGAT 59.519 38.462 3.13 0.00 43.48 2.45
827 834 7.307042 CCTGTAATCAATCGTTGACTGATGATC 60.307 40.741 3.13 0.00 43.48 2.92
828 835 7.041107 TGTAATCAATCGTTGACTGATGATCA 58.959 34.615 0.00 0.00 43.48 2.92
829 836 6.990341 AATCAATCGTTGACTGATGATCAA 57.010 33.333 0.00 0.00 43.48 2.57
830 837 7.563888 AATCAATCGTTGACTGATGATCAAT 57.436 32.000 0.00 0.00 43.48 2.57
831 838 6.354039 TCAATCGTTGACTGATGATCAATG 57.646 37.500 0.00 1.34 42.18 2.82
832 839 5.876460 TCAATCGTTGACTGATGATCAATGT 59.124 36.000 0.00 0.00 41.73 2.71
833 840 5.729974 ATCGTTGACTGATGATCAATGTG 57.270 39.130 0.00 0.00 41.73 3.21
834 841 4.819769 TCGTTGACTGATGATCAATGTGA 58.180 39.130 0.00 0.00 41.73 3.58
835 842 5.237048 TCGTTGACTGATGATCAATGTGAA 58.763 37.500 0.00 0.00 41.73 3.18
836 843 5.349543 TCGTTGACTGATGATCAATGTGAAG 59.650 40.000 0.00 0.00 41.73 3.02
837 844 5.330295 GTTGACTGATGATCAATGTGAAGC 58.670 41.667 0.00 0.00 38.31 3.86
838 845 4.581868 TGACTGATGATCAATGTGAAGCA 58.418 39.130 0.00 0.00 0.00 3.91
839 846 4.634443 TGACTGATGATCAATGTGAAGCAG 59.366 41.667 0.00 0.00 0.00 4.24
840 847 4.840271 ACTGATGATCAATGTGAAGCAGA 58.160 39.130 0.00 0.00 0.00 4.26
841 848 4.634883 ACTGATGATCAATGTGAAGCAGAC 59.365 41.667 0.00 0.00 0.00 3.51
842 849 3.943381 TGATGATCAATGTGAAGCAGACC 59.057 43.478 0.00 0.00 0.00 3.85
843 850 2.715046 TGATCAATGTGAAGCAGACCC 58.285 47.619 0.00 0.00 0.00 4.46
844 851 2.040145 TGATCAATGTGAAGCAGACCCA 59.960 45.455 0.00 0.00 0.00 4.51
845 852 1.896220 TCAATGTGAAGCAGACCCAC 58.104 50.000 0.00 0.00 0.00 4.61
846 853 1.142667 TCAATGTGAAGCAGACCCACA 59.857 47.619 0.00 0.00 43.77 4.17
847 854 1.955778 CAATGTGAAGCAGACCCACAA 59.044 47.619 0.00 0.00 43.02 3.33
848 855 1.609208 ATGTGAAGCAGACCCACAAC 58.391 50.000 0.00 0.00 43.02 3.32
849 856 0.254462 TGTGAAGCAGACCCACAACA 59.746 50.000 0.00 0.00 37.80 3.33
850 857 0.663153 GTGAAGCAGACCCACAACAC 59.337 55.000 0.00 0.00 0.00 3.32
851 858 0.465460 TGAAGCAGACCCACAACACC 60.465 55.000 0.00 0.00 0.00 4.16
852 859 0.465460 GAAGCAGACCCACAACACCA 60.465 55.000 0.00 0.00 0.00 4.17
853 860 0.466189 AAGCAGACCCACAACACCAG 60.466 55.000 0.00 0.00 0.00 4.00
854 861 1.898574 GCAGACCCACAACACCAGG 60.899 63.158 0.00 0.00 0.00 4.45
855 862 1.531748 CAGACCCACAACACCAGGT 59.468 57.895 0.00 0.00 34.57 4.00
856 863 0.762418 CAGACCCACAACACCAGGTA 59.238 55.000 0.00 0.00 31.10 3.08
857 864 1.056660 AGACCCACAACACCAGGTAG 58.943 55.000 0.00 0.00 31.10 3.18
858 865 0.763035 GACCCACAACACCAGGTAGT 59.237 55.000 0.00 0.00 31.10 2.73
859 866 1.142262 GACCCACAACACCAGGTAGTT 59.858 52.381 0.00 0.00 31.10 2.24
860 867 1.567175 ACCCACAACACCAGGTAGTTT 59.433 47.619 0.00 0.00 0.00 2.66
861 868 1.953686 CCCACAACACCAGGTAGTTTG 59.046 52.381 0.00 0.00 0.00 2.93
862 869 2.650322 CCACAACACCAGGTAGTTTGT 58.350 47.619 7.36 7.36 0.00 2.83
863 870 3.020984 CCACAACACCAGGTAGTTTGTT 58.979 45.455 9.71 0.00 32.34 2.83
865 872 3.708563 CAACACCAGGTAGTTTGTTGG 57.291 47.619 10.72 0.00 43.31 3.77
866 873 3.020984 CAACACCAGGTAGTTTGTTGGT 58.979 45.455 10.72 0.00 43.31 3.67
867 874 4.200874 CAACACCAGGTAGTTTGTTGGTA 58.799 43.478 10.72 0.00 43.31 3.25
868 875 4.081322 ACACCAGGTAGTTTGTTGGTAG 57.919 45.455 0.00 0.00 41.81 3.18
869 876 3.181448 ACACCAGGTAGTTTGTTGGTAGG 60.181 47.826 0.00 0.00 41.81 3.18
870 877 3.071892 CACCAGGTAGTTTGTTGGTAGGA 59.928 47.826 0.00 0.00 41.81 2.94
871 878 3.326880 ACCAGGTAGTTTGTTGGTAGGAG 59.673 47.826 0.00 0.00 41.92 3.69
872 879 3.326880 CCAGGTAGTTTGTTGGTAGGAGT 59.673 47.826 0.00 0.00 0.00 3.85
873 880 4.529377 CCAGGTAGTTTGTTGGTAGGAGTA 59.471 45.833 0.00 0.00 0.00 2.59
874 881 5.012354 CCAGGTAGTTTGTTGGTAGGAGTAA 59.988 44.000 0.00 0.00 0.00 2.24
875 882 6.164176 CAGGTAGTTTGTTGGTAGGAGTAAG 58.836 44.000 0.00 0.00 0.00 2.34
876 883 5.842874 AGGTAGTTTGTTGGTAGGAGTAAGT 59.157 40.000 0.00 0.00 0.00 2.24
877 884 7.012607 AGGTAGTTTGTTGGTAGGAGTAAGTA 58.987 38.462 0.00 0.00 0.00 2.24
878 885 7.677319 AGGTAGTTTGTTGGTAGGAGTAAGTAT 59.323 37.037 0.00 0.00 0.00 2.12
879 886 7.763071 GGTAGTTTGTTGGTAGGAGTAAGTATG 59.237 40.741 0.00 0.00 0.00 2.39
880 887 6.708285 AGTTTGTTGGTAGGAGTAAGTATGG 58.292 40.000 0.00 0.00 0.00 2.74
881 888 4.748277 TGTTGGTAGGAGTAAGTATGGC 57.252 45.455 0.00 0.00 0.00 4.40
882 889 3.131577 TGTTGGTAGGAGTAAGTATGGCG 59.868 47.826 0.00 0.00 0.00 5.69
883 890 3.022557 TGGTAGGAGTAAGTATGGCGT 57.977 47.619 0.00 0.00 0.00 5.68
884 891 3.368248 TGGTAGGAGTAAGTATGGCGTT 58.632 45.455 0.00 0.00 0.00 4.84
885 892 3.131577 TGGTAGGAGTAAGTATGGCGTTG 59.868 47.826 0.00 0.00 0.00 4.10
886 893 2.981859 AGGAGTAAGTATGGCGTTGG 57.018 50.000 0.00 0.00 0.00 3.77
887 894 2.185387 AGGAGTAAGTATGGCGTTGGT 58.815 47.619 0.00 0.00 0.00 3.67
888 895 2.093658 AGGAGTAAGTATGGCGTTGGTG 60.094 50.000 0.00 0.00 0.00 4.17
889 896 2.277084 GAGTAAGTATGGCGTTGGTGG 58.723 52.381 0.00 0.00 0.00 4.61
890 897 0.730840 GTAAGTATGGCGTTGGTGGC 59.269 55.000 0.00 0.00 0.00 5.01
896 903 4.992511 GGCGTTGGTGGCCGTACA 62.993 66.667 0.00 0.00 41.39 2.90
897 904 2.973600 GCGTTGGTGGCCGTACAA 60.974 61.111 0.00 0.00 0.00 2.41
898 905 2.940561 CGTTGGTGGCCGTACAAC 59.059 61.111 20.71 20.71 40.67 3.32
899 906 1.888172 CGTTGGTGGCCGTACAACA 60.888 57.895 26.34 6.18 43.38 3.33
900 907 1.650363 GTTGGTGGCCGTACAACAC 59.350 57.895 23.85 5.51 42.88 3.32
901 908 0.816421 GTTGGTGGCCGTACAACACT 60.816 55.000 23.85 0.00 42.88 3.55
902 909 0.107116 TTGGTGGCCGTACAACACTT 60.107 50.000 0.00 0.00 37.89 3.16
903 910 0.533308 TGGTGGCCGTACAACACTTC 60.533 55.000 0.00 0.00 32.08 3.01
904 911 0.533308 GGTGGCCGTACAACACTTCA 60.533 55.000 0.00 0.00 35.53 3.02
905 912 1.519408 GTGGCCGTACAACACTTCAT 58.481 50.000 0.00 0.00 32.58 2.57
906 913 1.877443 GTGGCCGTACAACACTTCATT 59.123 47.619 0.00 0.00 32.58 2.57
907 914 3.068560 GTGGCCGTACAACACTTCATTA 58.931 45.455 0.00 0.00 32.58 1.90
908 915 3.124636 GTGGCCGTACAACACTTCATTAG 59.875 47.826 0.00 0.00 32.58 1.73
909 916 2.095372 GGCCGTACAACACTTCATTAGC 59.905 50.000 0.00 0.00 0.00 3.09
910 917 2.739913 GCCGTACAACACTTCATTAGCA 59.260 45.455 0.00 0.00 0.00 3.49
911 918 3.424433 GCCGTACAACACTTCATTAGCAC 60.424 47.826 0.00 0.00 0.00 4.40
912 919 3.181534 CCGTACAACACTTCATTAGCACG 60.182 47.826 0.00 0.00 0.00 5.34
913 920 2.969443 ACAACACTTCATTAGCACGC 57.031 45.000 0.00 0.00 0.00 5.34
914 921 1.194547 ACAACACTTCATTAGCACGCG 59.805 47.619 3.53 3.53 0.00 6.01
915 922 0.165944 AACACTTCATTAGCACGCGC 59.834 50.000 5.73 0.00 38.99 6.86
916 923 0.948623 ACACTTCATTAGCACGCGCA 60.949 50.000 5.73 0.00 42.27 6.09
917 924 0.247419 CACTTCATTAGCACGCGCAG 60.247 55.000 5.73 0.00 42.27 5.18
918 925 1.349627 CTTCATTAGCACGCGCAGG 59.650 57.895 5.73 0.00 42.27 4.85
919 926 1.361668 CTTCATTAGCACGCGCAGGT 61.362 55.000 5.73 7.68 42.27 4.00
920 927 1.634757 TTCATTAGCACGCGCAGGTG 61.635 55.000 5.73 9.88 42.27 4.00
921 928 2.100031 CATTAGCACGCGCAGGTGA 61.100 57.895 18.04 7.70 42.27 4.02
922 929 1.811266 ATTAGCACGCGCAGGTGAG 60.811 57.895 18.04 0.00 42.27 3.51
943 950 4.167359 GCGCACGCGAGAGAGAGA 62.167 66.667 15.93 0.00 42.83 3.10
944 951 2.022623 CGCACGCGAGAGAGAGAG 59.977 66.667 15.93 0.00 42.83 3.20
945 952 2.456948 CGCACGCGAGAGAGAGAGA 61.457 63.158 15.93 0.00 42.83 3.10
946 953 1.351707 GCACGCGAGAGAGAGAGAG 59.648 63.158 15.93 0.00 33.96 3.20
947 954 1.087202 GCACGCGAGAGAGAGAGAGA 61.087 60.000 15.93 0.00 33.96 3.10
948 955 0.930310 CACGCGAGAGAGAGAGAGAG 59.070 60.000 15.93 0.00 33.96 3.20
949 956 0.821517 ACGCGAGAGAGAGAGAGAGA 59.178 55.000 15.93 0.00 33.96 3.10
950 957 1.202417 ACGCGAGAGAGAGAGAGAGAG 60.202 57.143 15.93 0.00 33.96 3.20
951 958 1.067060 CGCGAGAGAGAGAGAGAGAGA 59.933 57.143 0.00 0.00 0.00 3.10
952 959 2.748605 GCGAGAGAGAGAGAGAGAGAG 58.251 57.143 0.00 0.00 0.00 3.20
953 960 2.362397 GCGAGAGAGAGAGAGAGAGAGA 59.638 54.545 0.00 0.00 0.00 3.10
954 961 3.551863 GCGAGAGAGAGAGAGAGAGAGAG 60.552 56.522 0.00 0.00 0.00 3.20
955 962 3.885901 CGAGAGAGAGAGAGAGAGAGAGA 59.114 52.174 0.00 0.00 0.00 3.10
956 963 4.023279 CGAGAGAGAGAGAGAGAGAGAGAG 60.023 54.167 0.00 0.00 0.00 3.20
957 964 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
958 965 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
959 966 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
960 967 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
961 968 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
962 969 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
963 970 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
964 971 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
965 972 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
966 973 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
967 974 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
968 975 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
969 976 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
970 977 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
971 978 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
989 996 3.640967 AGAGAGAGAGAGAGAGAGAGAGC 59.359 52.174 0.00 0.00 0.00 4.09
991 998 2.101582 GAGAGAGAGAGAGAGAGAGCGT 59.898 54.545 0.00 0.00 0.00 5.07
1003 1010 3.083997 GAGCGTGGGGGAGGATGT 61.084 66.667 0.00 0.00 0.00 3.06
1006 1013 4.838152 CGTGGGGGAGGATGTGCG 62.838 72.222 0.00 0.00 0.00 5.34
1011 1018 4.899239 GGGAGGATGTGCGCCGAG 62.899 72.222 4.18 0.00 0.00 4.63
1056 1063 2.167861 GCCATGGTTCGTCTCGCTC 61.168 63.158 14.67 0.00 0.00 5.03
1109 1116 2.577593 GTACCGCCTCCTCCACAC 59.422 66.667 0.00 0.00 0.00 3.82
1110 1117 3.066190 TACCGCCTCCTCCACACG 61.066 66.667 0.00 0.00 0.00 4.49
1344 1351 1.337817 CCGTGCAGTTCGACTTCTCG 61.338 60.000 0.00 0.00 41.65 4.04
1412 1454 2.086869 TCCTCAAGGAACTACCGTACG 58.913 52.381 8.69 8.69 42.18 3.67
1419 1461 2.084546 GGAACTACCGTACGTGGTACT 58.915 52.381 15.21 0.00 43.56 2.73
1420 1462 2.159517 GGAACTACCGTACGTGGTACTG 60.160 54.545 15.21 0.00 43.56 2.74
1421 1463 1.453155 ACTACCGTACGTGGTACTGG 58.547 55.000 15.21 12.14 43.56 4.00
1422 1464 1.271379 ACTACCGTACGTGGTACTGGT 60.271 52.381 15.21 18.83 42.97 4.00
1423 1465 2.027561 ACTACCGTACGTGGTACTGGTA 60.028 50.000 15.21 18.97 41.78 3.25
1424 1466 1.165270 ACCGTACGTGGTACTGGTAC 58.835 55.000 15.21 2.58 40.81 3.34
1441 1483 2.819422 TACGTGCTGTACTGATCGAC 57.181 50.000 17.98 3.91 0.00 4.20
1585 1682 3.695606 GCAGAGGCGTGGGTGAGA 61.696 66.667 0.00 0.00 0.00 3.27
1684 1781 1.443702 CGTCGTCAACATCGGCTCA 60.444 57.895 0.00 0.00 0.00 4.26
1763 1947 1.338484 GGTACGTTTCCCAGTTCTCCC 60.338 57.143 0.00 0.00 0.00 4.30
1765 1949 2.033194 CGTTTCCCAGTTCTCCCGC 61.033 63.158 0.00 0.00 0.00 6.13
1773 1957 2.125350 GTTCTCCCGCAGCCTCTG 60.125 66.667 0.00 0.00 34.12 3.35
1996 2757 2.431683 TGGTGCCTCTGCCACTTC 59.568 61.111 0.00 0.00 36.33 3.01
2008 2769 3.677648 CACTTCGTCCCGGACCGT 61.678 66.667 13.94 4.18 0.00 4.83
2129 2891 4.767255 GACCTCACCCGCCAGCAG 62.767 72.222 0.00 0.00 0.00 4.24
2176 2964 9.801873 ATTATGTTGACTTGGTATTTATTGTGC 57.198 29.630 0.00 0.00 0.00 4.57
2177 2965 5.694816 TGTTGACTTGGTATTTATTGTGCG 58.305 37.500 0.00 0.00 0.00 5.34
2178 2966 5.470437 TGTTGACTTGGTATTTATTGTGCGA 59.530 36.000 0.00 0.00 0.00 5.10
2193 2984 8.942338 TTATTGTGCGAAGTATCTTTCATAGT 57.058 30.769 0.00 0.00 0.00 2.12
2195 2986 8.942338 ATTGTGCGAAGTATCTTTCATAGTAA 57.058 30.769 0.00 0.00 0.00 2.24
2196 2987 8.766000 TTGTGCGAAGTATCTTTCATAGTAAA 57.234 30.769 0.00 0.00 0.00 2.01
2197 2988 8.407457 TGTGCGAAGTATCTTTCATAGTAAAG 57.593 34.615 0.00 0.00 37.73 1.85
2198 2989 8.033038 TGTGCGAAGTATCTTTCATAGTAAAGT 58.967 33.333 0.00 0.00 37.65 2.66
2199 2990 9.512435 GTGCGAAGTATCTTTCATAGTAAAGTA 57.488 33.333 0.00 0.00 37.65 2.24
2208 2999 7.324935 TCTTTCATAGTAAAGTATTGGACGCA 58.675 34.615 0.00 0.00 37.65 5.24
2220 3011 1.227556 GGACGCAGATAACGCCCAT 60.228 57.895 0.00 0.00 32.77 4.00
2246 3037 5.625426 CGTGTGGCATATTAGATATCTGCCT 60.625 44.000 25.08 10.30 36.06 4.75
2287 3079 2.610859 GGAGGCAGTCCAAGGGGA 60.611 66.667 0.00 0.00 46.10 4.81
2409 3207 2.279935 AAAAATGCCCACACGTCCTA 57.720 45.000 0.00 0.00 0.00 2.94
2431 3231 0.819582 GCAGCTACGTTAGGTACCCA 59.180 55.000 8.74 0.00 34.67 4.51
2610 3711 5.637810 CCGTGTGTGATTAACTACTTGTCAT 59.362 40.000 0.00 0.00 0.00 3.06
2624 3725 8.718102 ACTACTTGTCATATATGGTCAAACAC 57.282 34.615 12.78 2.61 0.00 3.32
2644 3745 5.070001 ACACTAGTTGCCATGTGTGTTTAT 58.930 37.500 0.00 0.00 41.37 1.40
2810 3913 2.121786 CGTACGTGTAACTGCAGTTGT 58.878 47.619 36.50 27.71 38.90 3.32
2829 3932 1.389106 GTCATCCAACAACGTACGAGC 59.611 52.381 24.41 0.00 0.00 5.03
2911 4014 1.268899 AGAAACTAGTCCGTCCACACG 59.731 52.381 0.00 0.00 46.29 4.49
2969 4073 2.738521 CTCTCCAACGCCCACACG 60.739 66.667 0.00 0.00 39.50 4.49
3104 4209 3.264947 GGGCGTTAGTATTTCCGAAAGT 58.735 45.455 0.00 0.00 0.00 2.66
3105 4210 4.081752 TGGGCGTTAGTATTTCCGAAAGTA 60.082 41.667 0.00 0.00 0.00 2.24
3106 4211 5.052481 GGGCGTTAGTATTTCCGAAAGTAT 58.948 41.667 0.00 0.00 0.00 2.12
3107 4212 5.525012 GGGCGTTAGTATTTCCGAAAGTATT 59.475 40.000 0.00 0.00 0.00 1.89
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 5.248640 AGGAAGTGGTTGAGTGTCATTATG 58.751 41.667 0.00 0.00 0.00 1.90
3 4 4.974645 AGGAAGTGGTTGAGTGTCATTA 57.025 40.909 0.00 0.00 0.00 1.90
4 5 3.864789 AGGAAGTGGTTGAGTGTCATT 57.135 42.857 0.00 0.00 0.00 2.57
5 6 3.496870 GGAAGGAAGTGGTTGAGTGTCAT 60.497 47.826 0.00 0.00 0.00 3.06
6 7 2.158813 GGAAGGAAGTGGTTGAGTGTCA 60.159 50.000 0.00 0.00 0.00 3.58
7 8 2.495084 GGAAGGAAGTGGTTGAGTGTC 58.505 52.381 0.00 0.00 0.00 3.67
8 9 1.143073 GGGAAGGAAGTGGTTGAGTGT 59.857 52.381 0.00 0.00 0.00 3.55
9 10 1.142870 TGGGAAGGAAGTGGTTGAGTG 59.857 52.381 0.00 0.00 0.00 3.51
10 11 1.518367 TGGGAAGGAAGTGGTTGAGT 58.482 50.000 0.00 0.00 0.00 3.41
11 12 2.887151 ATGGGAAGGAAGTGGTTGAG 57.113 50.000 0.00 0.00 0.00 3.02
12 13 2.445145 TGAATGGGAAGGAAGTGGTTGA 59.555 45.455 0.00 0.00 0.00 3.18
13 14 2.875296 TGAATGGGAAGGAAGTGGTTG 58.125 47.619 0.00 0.00 0.00 3.77
14 15 3.833559 ATGAATGGGAAGGAAGTGGTT 57.166 42.857 0.00 0.00 0.00 3.67
15 16 3.701664 GAATGAATGGGAAGGAAGTGGT 58.298 45.455 0.00 0.00 0.00 4.16
16 17 2.684881 CGAATGAATGGGAAGGAAGTGG 59.315 50.000 0.00 0.00 0.00 4.00
17 18 3.347216 ACGAATGAATGGGAAGGAAGTG 58.653 45.455 0.00 0.00 0.00 3.16
18 19 3.721087 ACGAATGAATGGGAAGGAAGT 57.279 42.857 0.00 0.00 0.00 3.01
19 20 3.428045 GCAACGAATGAATGGGAAGGAAG 60.428 47.826 0.00 0.00 0.00 3.46
20 21 2.491693 GCAACGAATGAATGGGAAGGAA 59.508 45.455 0.00 0.00 0.00 3.36
21 22 2.091541 GCAACGAATGAATGGGAAGGA 58.908 47.619 0.00 0.00 0.00 3.36
22 23 1.818060 TGCAACGAATGAATGGGAAGG 59.182 47.619 0.00 0.00 0.00 3.46
23 24 3.441163 CATGCAACGAATGAATGGGAAG 58.559 45.455 0.00 0.00 40.91 3.46
24 25 2.417107 GCATGCAACGAATGAATGGGAA 60.417 45.455 14.21 0.00 44.30 3.97
25 26 1.134753 GCATGCAACGAATGAATGGGA 59.865 47.619 14.21 0.00 44.30 4.37
26 27 1.135527 AGCATGCAACGAATGAATGGG 59.864 47.619 21.98 0.00 44.30 4.00
27 28 2.572191 AGCATGCAACGAATGAATGG 57.428 45.000 21.98 0.13 44.30 3.16
28 29 3.060230 CACAAGCATGCAACGAATGAATG 59.940 43.478 21.98 8.89 46.55 2.67
29 30 3.247442 CACAAGCATGCAACGAATGAAT 58.753 40.909 21.98 0.00 0.00 2.57
30 31 2.607526 CCACAAGCATGCAACGAATGAA 60.608 45.455 21.98 0.00 0.00 2.57
31 32 1.068402 CCACAAGCATGCAACGAATGA 60.068 47.619 21.98 0.00 0.00 2.57
32 33 1.336148 ACCACAAGCATGCAACGAATG 60.336 47.619 21.98 10.75 0.00 2.67
33 34 0.961019 ACCACAAGCATGCAACGAAT 59.039 45.000 21.98 0.00 0.00 3.34
34 35 0.030504 CACCACAAGCATGCAACGAA 59.969 50.000 21.98 0.00 0.00 3.85
35 36 1.653667 CACCACAAGCATGCAACGA 59.346 52.632 21.98 0.00 0.00 3.85
36 37 2.017783 GCACCACAAGCATGCAACG 61.018 57.895 21.98 9.99 39.23 4.10
37 38 1.067749 TGCACCACAAGCATGCAAC 59.932 52.632 21.98 0.01 45.96 4.17
38 39 3.534941 TGCACCACAAGCATGCAA 58.465 50.000 21.98 0.00 45.96 4.08
44 45 3.491447 GGGATCATTAATGCACCACAAGC 60.491 47.826 22.59 5.72 0.00 4.01
45 46 3.243168 CGGGATCATTAATGCACCACAAG 60.243 47.826 22.59 12.50 0.00 3.16
46 47 2.687425 CGGGATCATTAATGCACCACAA 59.313 45.455 22.59 3.89 0.00 3.33
47 48 2.296792 CGGGATCATTAATGCACCACA 58.703 47.619 22.59 4.48 0.00 4.17
48 49 1.608590 CCGGGATCATTAATGCACCAC 59.391 52.381 22.59 14.98 0.00 4.16
49 50 1.214175 ACCGGGATCATTAATGCACCA 59.786 47.619 22.59 5.38 0.00 4.17
50 51 1.981256 ACCGGGATCATTAATGCACC 58.019 50.000 10.76 14.52 0.00 5.01
51 52 4.553938 CGTTAACCGGGATCATTAATGCAC 60.554 45.833 10.76 6.83 0.00 4.57
52 53 3.562141 CGTTAACCGGGATCATTAATGCA 59.438 43.478 10.76 0.00 0.00 3.96
53 54 3.810941 TCGTTAACCGGGATCATTAATGC 59.189 43.478 10.76 0.00 37.11 3.56
54 55 5.994887 TTCGTTAACCGGGATCATTAATG 57.005 39.130 6.32 9.29 37.11 1.90
55 56 6.824704 TCTTTTCGTTAACCGGGATCATTAAT 59.175 34.615 6.32 0.00 37.11 1.40
56 57 6.171921 TCTTTTCGTTAACCGGGATCATTAA 58.828 36.000 6.32 0.00 37.11 1.40
57 58 5.732633 TCTTTTCGTTAACCGGGATCATTA 58.267 37.500 6.32 0.00 37.11 1.90
58 59 4.581868 TCTTTTCGTTAACCGGGATCATT 58.418 39.130 6.32 0.00 37.11 2.57
59 60 4.210724 TCTTTTCGTTAACCGGGATCAT 57.789 40.909 6.32 0.00 37.11 2.45
60 61 3.681593 TCTTTTCGTTAACCGGGATCA 57.318 42.857 6.32 0.00 37.11 2.92
61 62 5.049198 ACTTTTCTTTTCGTTAACCGGGATC 60.049 40.000 6.32 0.00 37.11 3.36
62 63 4.823442 ACTTTTCTTTTCGTTAACCGGGAT 59.177 37.500 6.32 0.00 37.11 3.85
63 64 4.198530 ACTTTTCTTTTCGTTAACCGGGA 58.801 39.130 6.32 0.00 37.11 5.14
64 65 4.556942 ACTTTTCTTTTCGTTAACCGGG 57.443 40.909 6.32 0.00 37.11 5.73
65 66 5.453266 GTCAACTTTTCTTTTCGTTAACCGG 59.547 40.000 0.00 0.00 37.11 5.28
66 67 6.253013 AGTCAACTTTTCTTTTCGTTAACCG 58.747 36.000 0.00 0.00 38.13 4.44
67 68 7.462331 GCAAGTCAACTTTTCTTTTCGTTAACC 60.462 37.037 0.00 0.00 33.11 2.85
68 69 7.061326 TGCAAGTCAACTTTTCTTTTCGTTAAC 59.939 33.333 0.00 0.00 33.11 2.01
69 70 7.085116 TGCAAGTCAACTTTTCTTTTCGTTAA 58.915 30.769 0.00 0.00 33.11 2.01
70 71 6.613233 TGCAAGTCAACTTTTCTTTTCGTTA 58.387 32.000 0.00 0.00 33.11 3.18
71 72 5.465935 TGCAAGTCAACTTTTCTTTTCGTT 58.534 33.333 0.00 0.00 33.11 3.85
72 73 5.054390 TGCAAGTCAACTTTTCTTTTCGT 57.946 34.783 0.00 0.00 33.11 3.85
73 74 6.388259 TTTGCAAGTCAACTTTTCTTTTCG 57.612 33.333 0.00 0.00 33.73 3.46
74 75 7.962917 TCATTTGCAAGTCAACTTTTCTTTTC 58.037 30.769 0.00 0.00 33.73 2.29
75 76 7.603784 ACTCATTTGCAAGTCAACTTTTCTTTT 59.396 29.630 0.00 0.00 33.73 2.27
76 77 7.099120 ACTCATTTGCAAGTCAACTTTTCTTT 58.901 30.769 0.00 0.00 33.73 2.52
77 78 6.633856 ACTCATTTGCAAGTCAACTTTTCTT 58.366 32.000 0.00 0.00 33.73 2.52
78 79 6.127647 TGACTCATTTGCAAGTCAACTTTTCT 60.128 34.615 14.99 0.00 46.59 2.52
79 80 6.035843 TGACTCATTTGCAAGTCAACTTTTC 58.964 36.000 14.99 0.00 46.59 2.29
80 81 5.964758 TGACTCATTTGCAAGTCAACTTTT 58.035 33.333 14.99 0.00 46.59 2.27
81 82 5.581126 TGACTCATTTGCAAGTCAACTTT 57.419 34.783 14.99 0.00 46.59 2.66
113 114 8.548877 ACAAACTCATATTACAGGTACCAAGAT 58.451 33.333 15.94 0.00 0.00 2.40
114 115 7.822334 CACAAACTCATATTACAGGTACCAAGA 59.178 37.037 15.94 0.00 0.00 3.02
115 116 7.065803 CCACAAACTCATATTACAGGTACCAAG 59.934 40.741 15.94 8.83 0.00 3.61
116 117 6.882140 CCACAAACTCATATTACAGGTACCAA 59.118 38.462 15.94 0.00 0.00 3.67
117 118 6.411376 CCACAAACTCATATTACAGGTACCA 58.589 40.000 15.94 0.00 0.00 3.25
118 119 5.296035 GCCACAAACTCATATTACAGGTACC 59.704 44.000 2.73 2.73 0.00 3.34
119 120 5.296035 GGCCACAAACTCATATTACAGGTAC 59.704 44.000 0.00 0.00 0.00 3.34
120 121 5.190925 AGGCCACAAACTCATATTACAGGTA 59.809 40.000 5.01 0.00 0.00 3.08
121 122 4.018415 AGGCCACAAACTCATATTACAGGT 60.018 41.667 5.01 0.00 0.00 4.00
122 123 4.526970 AGGCCACAAACTCATATTACAGG 58.473 43.478 5.01 0.00 0.00 4.00
123 124 5.415701 ACAAGGCCACAAACTCATATTACAG 59.584 40.000 5.01 0.00 0.00 2.74
124 125 5.321102 ACAAGGCCACAAACTCATATTACA 58.679 37.500 5.01 0.00 0.00 2.41
125 126 5.897377 ACAAGGCCACAAACTCATATTAC 57.103 39.130 5.01 0.00 0.00 1.89
126 127 9.337396 CTTATACAAGGCCACAAACTCATATTA 57.663 33.333 5.01 0.00 0.00 0.98
127 128 7.285401 CCTTATACAAGGCCACAAACTCATATT 59.715 37.037 5.01 0.00 44.90 1.28
128 129 6.772716 CCTTATACAAGGCCACAAACTCATAT 59.227 38.462 5.01 0.00 44.90 1.78
129 130 6.119536 CCTTATACAAGGCCACAAACTCATA 58.880 40.000 5.01 0.00 44.90 2.15
130 131 4.949856 CCTTATACAAGGCCACAAACTCAT 59.050 41.667 5.01 0.00 44.90 2.90
131 132 4.331968 CCTTATACAAGGCCACAAACTCA 58.668 43.478 5.01 0.00 44.90 3.41
132 133 4.965119 CCTTATACAAGGCCACAAACTC 57.035 45.455 5.01 0.00 44.90 3.01
143 144 6.253946 ACTCCCTTCATTCCCTTATACAAG 57.746 41.667 0.00 0.00 0.00 3.16
144 145 6.906901 AGTACTCCCTTCATTCCCTTATACAA 59.093 38.462 0.00 0.00 0.00 2.41
145 146 6.449956 AGTACTCCCTTCATTCCCTTATACA 58.550 40.000 0.00 0.00 0.00 2.29
146 147 6.997942 AGTACTCCCTTCATTCCCTTATAC 57.002 41.667 0.00 0.00 0.00 1.47
147 148 7.834046 AGTAGTACTCCCTTCATTCCCTTATA 58.166 38.462 0.00 0.00 0.00 0.98
148 149 6.694611 AGTAGTACTCCCTTCATTCCCTTAT 58.305 40.000 0.00 0.00 0.00 1.73
149 150 6.101274 AGTAGTACTCCCTTCATTCCCTTA 57.899 41.667 0.00 0.00 0.00 2.69
150 151 4.961585 AGTAGTACTCCCTTCATTCCCTT 58.038 43.478 0.00 0.00 0.00 3.95
151 152 4.016479 TGAGTAGTACTCCCTTCATTCCCT 60.016 45.833 24.32 0.00 44.44 4.20
152 153 4.287552 TGAGTAGTACTCCCTTCATTCCC 58.712 47.826 24.32 0.00 44.44 3.97
153 154 4.342665 CCTGAGTAGTACTCCCTTCATTCC 59.657 50.000 24.32 0.26 44.44 3.01
154 155 4.202172 GCCTGAGTAGTACTCCCTTCATTC 60.202 50.000 24.32 1.22 44.44 2.67
155 156 3.707102 GCCTGAGTAGTACTCCCTTCATT 59.293 47.826 24.32 0.00 44.44 2.57
156 157 3.301274 GCCTGAGTAGTACTCCCTTCAT 58.699 50.000 24.32 0.00 44.44 2.57
157 158 2.623502 GGCCTGAGTAGTACTCCCTTCA 60.624 54.545 24.32 8.18 44.44 3.02
158 159 2.033372 GGCCTGAGTAGTACTCCCTTC 58.967 57.143 24.32 12.32 44.44 3.46
159 160 1.361543 TGGCCTGAGTAGTACTCCCTT 59.638 52.381 24.32 0.00 44.44 3.95
160 161 1.008403 TGGCCTGAGTAGTACTCCCT 58.992 55.000 24.32 0.00 44.44 4.20
161 162 1.112950 GTGGCCTGAGTAGTACTCCC 58.887 60.000 24.32 18.83 44.44 4.30
162 163 1.751924 CTGTGGCCTGAGTAGTACTCC 59.248 57.143 24.32 12.33 44.44 3.85
163 164 2.724454 TCTGTGGCCTGAGTAGTACTC 58.276 52.381 21.35 21.35 45.26 2.59
164 165 2.901338 TCTGTGGCCTGAGTAGTACT 57.099 50.000 3.32 1.37 0.00 2.73
165 166 3.024547 TGATCTGTGGCCTGAGTAGTAC 58.975 50.000 3.32 0.00 0.00 2.73
261 263 3.325293 ACAGCACACTACTGAATCCTG 57.675 47.619 0.00 0.00 38.55 3.86
304 306 8.286191 ACAAATCAGGAATACTCCAGAATTTC 57.714 34.615 0.00 0.00 45.24 2.17
435 439 2.124151 GAGGCGGCATTGGTGGAT 60.124 61.111 13.08 0.00 0.00 3.41
443 447 2.120909 CGAATTTGGGAGGCGGCAT 61.121 57.895 13.08 0.00 0.00 4.40
476 480 3.289062 TGTTCGACCGAGCGGACA 61.289 61.111 16.83 6.50 46.71 4.02
577 581 2.736721 CTCGTTTCTTCTCGGCAATTCA 59.263 45.455 0.00 0.00 0.00 2.57
595 599 1.634702 CTTTTTCTCTCTCCGGCTCG 58.365 55.000 0.00 0.00 0.00 5.03
612 619 9.797556 GGTTTTTATTCATATAGCGAAAACCTT 57.202 29.630 16.39 0.00 45.36 3.50
674 681 9.594478 TCAACAAGTAATATAATTCTCTCGCAA 57.406 29.630 0.00 0.00 0.00 4.85
675 682 9.764363 ATCAACAAGTAATATAATTCTCTCGCA 57.236 29.630 0.00 0.00 0.00 5.10
752 759 5.611374 CAAGACTCACCTCTTTTTACCTGA 58.389 41.667 0.00 0.00 0.00 3.86
753 760 4.214332 GCAAGACTCACCTCTTTTTACCTG 59.786 45.833 0.00 0.00 0.00 4.00
754 761 4.390264 GCAAGACTCACCTCTTTTTACCT 58.610 43.478 0.00 0.00 0.00 3.08
755 762 3.186613 CGCAAGACTCACCTCTTTTTACC 59.813 47.826 0.00 0.00 43.02 2.85
756 763 3.186613 CCGCAAGACTCACCTCTTTTTAC 59.813 47.826 0.00 0.00 43.02 2.01
757 764 3.399330 CCGCAAGACTCACCTCTTTTTA 58.601 45.455 0.00 0.00 43.02 1.52
758 765 2.222027 CCGCAAGACTCACCTCTTTTT 58.778 47.619 0.00 0.00 43.02 1.94
759 766 1.884235 CCGCAAGACTCACCTCTTTT 58.116 50.000 0.00 0.00 43.02 2.27
760 767 0.603975 GCCGCAAGACTCACCTCTTT 60.604 55.000 0.00 0.00 43.02 2.52
761 768 1.004440 GCCGCAAGACTCACCTCTT 60.004 57.895 0.00 0.00 43.02 2.85
762 769 1.548357 ATGCCGCAAGACTCACCTCT 61.548 55.000 0.00 0.00 43.02 3.69
763 770 1.078848 ATGCCGCAAGACTCACCTC 60.079 57.895 0.00 0.00 43.02 3.85
764 771 1.078848 GATGCCGCAAGACTCACCT 60.079 57.895 0.00 0.00 43.02 4.00
765 772 0.955428 TTGATGCCGCAAGACTCACC 60.955 55.000 0.00 0.00 43.02 4.02
766 773 1.089920 ATTGATGCCGCAAGACTCAC 58.910 50.000 0.00 0.00 43.02 3.51
767 774 2.689553 TATTGATGCCGCAAGACTCA 57.310 45.000 0.00 0.00 43.02 3.41
768 775 2.481952 GGATATTGATGCCGCAAGACTC 59.518 50.000 0.00 0.00 43.02 3.36
769 776 2.498167 GGATATTGATGCCGCAAGACT 58.502 47.619 0.00 0.00 43.02 3.24
770 777 1.195448 CGGATATTGATGCCGCAAGAC 59.805 52.381 0.00 0.00 38.46 3.01
771 778 1.511850 CGGATATTGATGCCGCAAGA 58.488 50.000 0.00 0.00 38.46 3.02
777 784 0.034896 ACCGGACGGATATTGATGCC 59.965 55.000 18.80 0.00 38.96 4.40
778 785 1.429463 GACCGGACGGATATTGATGC 58.571 55.000 18.80 0.00 38.96 3.91
779 786 1.668919 CGGACCGGACGGATATTGATG 60.669 57.143 18.80 0.00 38.96 3.07
780 787 0.601558 CGGACCGGACGGATATTGAT 59.398 55.000 18.80 0.00 38.96 2.57
781 788 2.035421 CGGACCGGACGGATATTGA 58.965 57.895 18.80 0.00 38.96 2.57
782 789 4.647654 CGGACCGGACGGATATTG 57.352 61.111 18.80 0.00 38.96 1.90
793 800 0.179056 ATTGATTACAGGCCGGACCG 60.179 55.000 10.86 6.99 46.52 4.79
794 801 1.594331 GATTGATTACAGGCCGGACC 58.406 55.000 10.86 4.96 39.61 4.46
795 802 1.217882 CGATTGATTACAGGCCGGAC 58.782 55.000 10.86 0.00 0.00 4.79
796 803 0.828022 ACGATTGATTACAGGCCGGA 59.172 50.000 10.86 0.00 0.00 5.14
797 804 1.330521 CAACGATTGATTACAGGCCGG 59.669 52.381 0.00 0.00 0.00 6.13
798 805 2.030457 GTCAACGATTGATTACAGGCCG 59.970 50.000 0.00 0.00 42.47 6.13
799 806 3.063997 CAGTCAACGATTGATTACAGGCC 59.936 47.826 0.00 0.00 42.47 5.19
800 807 3.932710 TCAGTCAACGATTGATTACAGGC 59.067 43.478 0.00 0.00 42.47 4.85
801 808 5.812127 TCATCAGTCAACGATTGATTACAGG 59.188 40.000 0.00 0.00 42.47 4.00
802 809 6.892310 TCATCAGTCAACGATTGATTACAG 57.108 37.500 0.00 0.00 42.47 2.74
803 810 7.041107 TGATCATCAGTCAACGATTGATTACA 58.959 34.615 0.00 0.00 42.47 2.41
804 811 7.468922 TGATCATCAGTCAACGATTGATTAC 57.531 36.000 0.00 0.00 42.47 1.89
805 812 8.553696 CATTGATCATCAGTCAACGATTGATTA 58.446 33.333 0.00 0.00 42.47 1.75
806 813 6.990341 TTGATCATCAGTCAACGATTGATT 57.010 33.333 0.00 0.00 42.47 2.57
807 814 6.541278 ACATTGATCATCAGTCAACGATTGAT 59.459 34.615 0.00 0.00 42.47 2.57
808 815 5.876460 ACATTGATCATCAGTCAACGATTGA 59.124 36.000 0.00 0.00 38.31 2.57
809 816 5.963586 CACATTGATCATCAGTCAACGATTG 59.036 40.000 0.00 0.00 38.31 2.67
810 817 5.876460 TCACATTGATCATCAGTCAACGATT 59.124 36.000 0.00 0.00 38.31 3.34
811 818 5.422145 TCACATTGATCATCAGTCAACGAT 58.578 37.500 0.00 0.00 38.31 3.73
812 819 4.819769 TCACATTGATCATCAGTCAACGA 58.180 39.130 0.00 0.00 38.31 3.85
813 820 5.535043 TTCACATTGATCATCAGTCAACG 57.465 39.130 0.00 0.00 38.31 4.10
814 821 5.106436 TGCTTCACATTGATCATCAGTCAAC 60.106 40.000 0.00 0.00 38.31 3.18
815 822 5.005094 TGCTTCACATTGATCATCAGTCAA 58.995 37.500 0.00 0.00 39.65 3.18
816 823 4.581868 TGCTTCACATTGATCATCAGTCA 58.418 39.130 0.00 0.00 0.00 3.41
817 824 4.874396 TCTGCTTCACATTGATCATCAGTC 59.126 41.667 0.00 0.00 0.00 3.51
818 825 4.634883 GTCTGCTTCACATTGATCATCAGT 59.365 41.667 0.00 0.00 0.00 3.41
819 826 4.035324 GGTCTGCTTCACATTGATCATCAG 59.965 45.833 0.00 0.00 0.00 2.90
820 827 3.943381 GGTCTGCTTCACATTGATCATCA 59.057 43.478 0.00 0.00 0.00 3.07
821 828 3.314635 GGGTCTGCTTCACATTGATCATC 59.685 47.826 0.00 0.00 0.00 2.92
822 829 3.285484 GGGTCTGCTTCACATTGATCAT 58.715 45.455 0.00 0.00 0.00 2.45
823 830 2.040145 TGGGTCTGCTTCACATTGATCA 59.960 45.455 0.00 0.00 0.00 2.92
824 831 2.421424 GTGGGTCTGCTTCACATTGATC 59.579 50.000 0.00 0.00 0.00 2.92
825 832 2.224843 TGTGGGTCTGCTTCACATTGAT 60.225 45.455 0.00 0.00 36.61 2.57
826 833 1.142667 TGTGGGTCTGCTTCACATTGA 59.857 47.619 0.00 0.00 36.61 2.57
827 834 1.608055 TGTGGGTCTGCTTCACATTG 58.392 50.000 0.00 0.00 36.61 2.82
828 835 1.956477 GTTGTGGGTCTGCTTCACATT 59.044 47.619 0.00 0.00 40.49 2.71
829 836 1.133823 TGTTGTGGGTCTGCTTCACAT 60.134 47.619 0.00 0.00 40.49 3.21
830 837 0.254462 TGTTGTGGGTCTGCTTCACA 59.746 50.000 0.00 0.00 39.31 3.58
831 838 0.663153 GTGTTGTGGGTCTGCTTCAC 59.337 55.000 0.00 0.00 0.00 3.18
832 839 0.465460 GGTGTTGTGGGTCTGCTTCA 60.465 55.000 0.00 0.00 0.00 3.02
833 840 0.465460 TGGTGTTGTGGGTCTGCTTC 60.465 55.000 0.00 0.00 0.00 3.86
834 841 0.466189 CTGGTGTTGTGGGTCTGCTT 60.466 55.000 0.00 0.00 0.00 3.91
835 842 1.149174 CTGGTGTTGTGGGTCTGCT 59.851 57.895 0.00 0.00 0.00 4.24
836 843 1.898574 CCTGGTGTTGTGGGTCTGC 60.899 63.158 0.00 0.00 0.00 4.26
837 844 0.762418 TACCTGGTGTTGTGGGTCTG 59.238 55.000 10.23 0.00 33.74 3.51
838 845 1.056660 CTACCTGGTGTTGTGGGTCT 58.943 55.000 10.23 0.00 33.74 3.85
839 846 0.763035 ACTACCTGGTGTTGTGGGTC 59.237 55.000 10.23 0.00 31.49 4.46
840 847 1.218844 AACTACCTGGTGTTGTGGGT 58.781 50.000 10.23 0.00 33.08 4.51
841 848 1.953686 CAAACTACCTGGTGTTGTGGG 59.046 52.381 10.23 0.00 33.08 4.61
842 849 2.650322 ACAAACTACCTGGTGTTGTGG 58.350 47.619 18.67 12.29 33.08 4.17
843 850 3.181491 CCAACAAACTACCTGGTGTTGTG 60.181 47.826 19.56 16.71 46.00 3.33
844 851 3.020984 CCAACAAACTACCTGGTGTTGT 58.979 45.455 19.54 17.56 46.00 3.32
845 852 3.020984 ACCAACAAACTACCTGGTGTTG 58.979 45.455 10.23 13.98 46.65 3.33
846 853 3.375647 ACCAACAAACTACCTGGTGTT 57.624 42.857 10.23 9.04 40.69 3.32
847 854 3.181448 CCTACCAACAAACTACCTGGTGT 60.181 47.826 10.23 2.76 42.19 4.16
848 855 3.071892 TCCTACCAACAAACTACCTGGTG 59.928 47.826 10.23 2.08 42.19 4.17
849 856 3.320129 TCCTACCAACAAACTACCTGGT 58.680 45.455 4.05 4.05 44.37 4.00
850 857 3.326880 ACTCCTACCAACAAACTACCTGG 59.673 47.826 0.00 0.00 34.95 4.45
851 858 4.618920 ACTCCTACCAACAAACTACCTG 57.381 45.455 0.00 0.00 0.00 4.00
852 859 5.842874 ACTTACTCCTACCAACAAACTACCT 59.157 40.000 0.00 0.00 0.00 3.08
853 860 6.106648 ACTTACTCCTACCAACAAACTACC 57.893 41.667 0.00 0.00 0.00 3.18
854 861 7.763071 CCATACTTACTCCTACCAACAAACTAC 59.237 40.741 0.00 0.00 0.00 2.73
855 862 7.580109 GCCATACTTACTCCTACCAACAAACTA 60.580 40.741 0.00 0.00 0.00 2.24
856 863 6.708285 CCATACTTACTCCTACCAACAAACT 58.292 40.000 0.00 0.00 0.00 2.66
857 864 5.353400 GCCATACTTACTCCTACCAACAAAC 59.647 44.000 0.00 0.00 0.00 2.93
858 865 5.493809 GCCATACTTACTCCTACCAACAAA 58.506 41.667 0.00 0.00 0.00 2.83
859 866 4.382254 CGCCATACTTACTCCTACCAACAA 60.382 45.833 0.00 0.00 0.00 2.83
860 867 3.131577 CGCCATACTTACTCCTACCAACA 59.868 47.826 0.00 0.00 0.00 3.33
861 868 3.131755 ACGCCATACTTACTCCTACCAAC 59.868 47.826 0.00 0.00 0.00 3.77
862 869 3.368248 ACGCCATACTTACTCCTACCAA 58.632 45.455 0.00 0.00 0.00 3.67
863 870 3.022557 ACGCCATACTTACTCCTACCA 57.977 47.619 0.00 0.00 0.00 3.25
864 871 3.492137 CCAACGCCATACTTACTCCTACC 60.492 52.174 0.00 0.00 0.00 3.18
865 872 3.131755 ACCAACGCCATACTTACTCCTAC 59.868 47.826 0.00 0.00 0.00 3.18
866 873 3.131577 CACCAACGCCATACTTACTCCTA 59.868 47.826 0.00 0.00 0.00 2.94
867 874 2.093658 CACCAACGCCATACTTACTCCT 60.094 50.000 0.00 0.00 0.00 3.69
868 875 2.277084 CACCAACGCCATACTTACTCC 58.723 52.381 0.00 0.00 0.00 3.85
869 876 2.277084 CCACCAACGCCATACTTACTC 58.723 52.381 0.00 0.00 0.00 2.59
870 877 1.677820 GCCACCAACGCCATACTTACT 60.678 52.381 0.00 0.00 0.00 2.24
871 878 0.730840 GCCACCAACGCCATACTTAC 59.269 55.000 0.00 0.00 0.00 2.34
872 879 0.393267 GGCCACCAACGCCATACTTA 60.393 55.000 0.00 0.00 46.27 2.24
873 880 1.677633 GGCCACCAACGCCATACTT 60.678 57.895 0.00 0.00 46.27 2.24
874 881 2.045340 GGCCACCAACGCCATACT 60.045 61.111 0.00 0.00 46.27 2.12
879 886 4.992511 TGTACGGCCACCAACGCC 62.993 66.667 2.24 0.00 43.38 5.68
880 887 2.973600 TTGTACGGCCACCAACGC 60.974 61.111 2.24 0.00 0.00 4.84
881 888 1.888172 TGTTGTACGGCCACCAACG 60.888 57.895 18.74 1.16 40.97 4.10
882 889 0.816421 AGTGTTGTACGGCCACCAAC 60.816 55.000 17.75 17.75 39.08 3.77
883 890 0.107116 AAGTGTTGTACGGCCACCAA 60.107 50.000 2.24 0.00 0.00 3.67
884 891 0.533308 GAAGTGTTGTACGGCCACCA 60.533 55.000 2.24 0.00 0.00 4.17
885 892 0.533308 TGAAGTGTTGTACGGCCACC 60.533 55.000 2.24 0.00 0.00 4.61
886 893 1.519408 ATGAAGTGTTGTACGGCCAC 58.481 50.000 2.24 0.00 0.00 5.01
887 894 2.264005 AATGAAGTGTTGTACGGCCA 57.736 45.000 2.24 0.00 0.00 5.36
888 895 2.095372 GCTAATGAAGTGTTGTACGGCC 59.905 50.000 0.00 0.00 0.00 6.13
889 896 2.739913 TGCTAATGAAGTGTTGTACGGC 59.260 45.455 0.00 0.00 0.00 5.68
890 897 3.181534 CGTGCTAATGAAGTGTTGTACGG 60.182 47.826 0.00 0.00 0.00 4.02
891 898 3.720920 GCGTGCTAATGAAGTGTTGTACG 60.721 47.826 0.00 0.00 0.00 3.67
892 899 3.720920 CGCGTGCTAATGAAGTGTTGTAC 60.721 47.826 0.00 0.00 0.00 2.90
893 900 2.410392 CGCGTGCTAATGAAGTGTTGTA 59.590 45.455 0.00 0.00 0.00 2.41
894 901 1.194547 CGCGTGCTAATGAAGTGTTGT 59.805 47.619 0.00 0.00 0.00 3.32
895 902 1.869503 CGCGTGCTAATGAAGTGTTG 58.130 50.000 0.00 0.00 0.00 3.33
896 903 0.165944 GCGCGTGCTAATGAAGTGTT 59.834 50.000 15.02 0.00 38.39 3.32
897 904 0.948623 TGCGCGTGCTAATGAAGTGT 60.949 50.000 23.16 0.00 43.34 3.55
898 905 0.247419 CTGCGCGTGCTAATGAAGTG 60.247 55.000 23.16 0.00 43.34 3.16
899 906 1.361668 CCTGCGCGTGCTAATGAAGT 61.362 55.000 23.16 0.00 43.34 3.01
900 907 1.349627 CCTGCGCGTGCTAATGAAG 59.650 57.895 23.16 9.61 43.34 3.02
901 908 1.375396 ACCTGCGCGTGCTAATGAA 60.375 52.632 23.16 0.00 43.34 2.57
902 909 2.100031 CACCTGCGCGTGCTAATGA 61.100 57.895 23.16 0.00 43.34 2.57
903 910 2.028766 CTCACCTGCGCGTGCTAATG 62.029 60.000 23.16 16.24 43.34 1.90
904 911 1.811266 CTCACCTGCGCGTGCTAAT 60.811 57.895 23.16 3.95 43.34 1.73
905 912 2.432456 CTCACCTGCGCGTGCTAA 60.432 61.111 23.16 0.97 43.34 3.09
924 931 4.467062 TCTCTCTCGCGTGCGCTG 62.467 66.667 9.73 1.66 39.59 5.18
925 932 4.172772 CTCTCTCTCGCGTGCGCT 62.173 66.667 9.73 0.00 39.59 5.92
926 933 4.167359 TCTCTCTCTCGCGTGCGC 62.167 66.667 9.79 0.00 39.59 6.09
927 934 2.022623 CTCTCTCTCTCGCGTGCG 59.977 66.667 5.77 8.14 41.35 5.34
928 935 1.087202 TCTCTCTCTCTCTCGCGTGC 61.087 60.000 5.77 0.00 0.00 5.34
929 936 0.930310 CTCTCTCTCTCTCTCGCGTG 59.070 60.000 5.77 3.13 0.00 5.34
930 937 0.821517 TCTCTCTCTCTCTCTCGCGT 59.178 55.000 5.77 0.00 0.00 6.01
931 938 1.067060 TCTCTCTCTCTCTCTCTCGCG 59.933 57.143 0.00 0.00 0.00 5.87
932 939 2.362397 TCTCTCTCTCTCTCTCTCTCGC 59.638 54.545 0.00 0.00 0.00 5.03
933 940 3.885901 TCTCTCTCTCTCTCTCTCTCTCG 59.114 52.174 0.00 0.00 0.00 4.04
934 941 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
935 942 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
936 943 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
937 944 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
938 945 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
939 946 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
940 947 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
941 948 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
942 949 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
943 950 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
944 951 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
945 952 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
946 953 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
947 954 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
948 955 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
949 956 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
950 957 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
951 958 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
952 959 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
953 960 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
954 961 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
955 962 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
956 963 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
957 964 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
958 965 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
959 966 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
960 967 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
961 968 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
962 969 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
963 970 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
964 971 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
965 972 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
966 973 4.261994 GCTCTCTCTCTCTCTCTCTCTCTC 60.262 54.167 0.00 0.00 0.00 3.20
967 974 3.640967 GCTCTCTCTCTCTCTCTCTCTCT 59.359 52.174 0.00 0.00 0.00 3.10
968 975 3.551863 CGCTCTCTCTCTCTCTCTCTCTC 60.552 56.522 0.00 0.00 0.00 3.20
969 976 2.363680 CGCTCTCTCTCTCTCTCTCTCT 59.636 54.545 0.00 0.00 0.00 3.10
970 977 2.101582 ACGCTCTCTCTCTCTCTCTCTC 59.898 54.545 0.00 0.00 0.00 3.20
971 978 2.111384 ACGCTCTCTCTCTCTCTCTCT 58.889 52.381 0.00 0.00 0.00 3.10
989 996 4.838152 CGCACATCCTCCCCCACG 62.838 72.222 0.00 0.00 0.00 4.94
1356 1363 1.956477 TGCTTTCTTTCACCTTGAGGC 59.044 47.619 0.00 0.00 39.32 4.70
1370 1377 3.862063 CTGCGTGCGTGGTGCTTTC 62.862 63.158 0.00 0.00 46.63 2.62
1371 1378 3.952675 CTGCGTGCGTGGTGCTTT 61.953 61.111 0.00 0.00 46.63 3.51
1392 1434 2.086869 CGTACGGTAGTTCCTTGAGGA 58.913 52.381 7.57 0.00 43.73 3.71
1412 1454 0.316204 ACAGCACGTACCAGTACCAC 59.684 55.000 2.46 0.00 32.61 4.16
1422 1464 1.399440 GGTCGATCAGTACAGCACGTA 59.601 52.381 0.00 0.00 0.00 3.57
1423 1465 0.170561 GGTCGATCAGTACAGCACGT 59.829 55.000 0.00 0.00 0.00 4.49
1424 1466 0.861866 CGGTCGATCAGTACAGCACG 60.862 60.000 0.00 0.00 0.00 5.34
1425 1467 0.170561 ACGGTCGATCAGTACAGCAC 59.829 55.000 0.00 0.00 0.00 4.40
1441 1483 2.203422 TCCCCTGCCAAAACACGG 60.203 61.111 0.00 0.00 0.00 4.94
1507 1604 2.052237 GCGTTGTTCACCAGCACG 60.052 61.111 0.00 0.00 0.00 5.34
1570 1667 0.904865 TCATTCTCACCCACGCCTCT 60.905 55.000 0.00 0.00 0.00 3.69
1585 1682 2.355716 CCACAGGTTCACCCGTATCATT 60.356 50.000 0.00 0.00 38.74 2.57
1751 1935 3.706373 GCTGCGGGAGAACTGGGA 61.706 66.667 0.00 0.00 0.00 4.37
1765 1949 0.038251 TGTACTCAACGCAGAGGCTG 60.038 55.000 9.22 0.00 39.97 4.85
1773 1957 0.887387 TTTGCCCCTGTACTCAACGC 60.887 55.000 0.00 0.00 0.00 4.84
2064 2825 0.179702 GCCTGATGATGACCTGAGCA 59.820 55.000 0.00 0.00 0.00 4.26
2094 2856 3.177249 GCCGCTAACGACGTCCAC 61.177 66.667 10.58 0.00 43.93 4.02
2095 2857 4.764336 CGCCGCTAACGACGTCCA 62.764 66.667 10.58 0.00 40.49 4.02
2153 2941 6.150307 TCGCACAATAAATACCAAGTCAACAT 59.850 34.615 0.00 0.00 0.00 2.71
2173 2961 8.408743 ACTTTACTATGAAAGATACTTCGCAC 57.591 34.615 3.04 0.00 38.48 5.34
2190 2981 6.914215 CGTTATCTGCGTCCAATACTTTACTA 59.086 38.462 0.00 0.00 0.00 1.82
2191 2982 5.747197 CGTTATCTGCGTCCAATACTTTACT 59.253 40.000 0.00 0.00 0.00 2.24
2192 2983 5.555818 GCGTTATCTGCGTCCAATACTTTAC 60.556 44.000 0.00 0.00 0.00 2.01
2193 2984 4.505191 GCGTTATCTGCGTCCAATACTTTA 59.495 41.667 0.00 0.00 0.00 1.85
2194 2985 3.308866 GCGTTATCTGCGTCCAATACTTT 59.691 43.478 0.00 0.00 0.00 2.66
2195 2986 2.864343 GCGTTATCTGCGTCCAATACTT 59.136 45.455 0.00 0.00 0.00 2.24
2196 2987 2.470821 GCGTTATCTGCGTCCAATACT 58.529 47.619 0.00 0.00 0.00 2.12
2197 2988 1.525619 GGCGTTATCTGCGTCCAATAC 59.474 52.381 0.00 0.00 0.00 1.89
2198 2989 1.860676 GGCGTTATCTGCGTCCAATA 58.139 50.000 0.00 0.00 0.00 1.90
2199 2990 2.690326 GGCGTTATCTGCGTCCAAT 58.310 52.632 0.00 0.00 0.00 3.16
2208 2999 1.202486 CCACACGTATGGGCGTTATCT 60.202 52.381 4.49 0.00 43.83 1.98
2220 3011 6.330278 GCAGATATCTAATATGCCACACGTA 58.670 40.000 4.54 0.00 0.00 3.57
2260 3051 2.254737 GACTGCCTCCTGCTCATGCT 62.255 60.000 0.00 0.00 42.00 3.79
2282 3073 4.033776 CGCCCACACACATCCCCT 62.034 66.667 0.00 0.00 0.00 4.79
2283 3074 3.561120 TTCGCCCACACACATCCCC 62.561 63.158 0.00 0.00 0.00 4.81
2287 3079 2.192664 TAATGTTCGCCCACACACAT 57.807 45.000 0.00 0.00 0.00 3.21
2389 3186 2.279935 AGGACGTGTGGGCATTTTTA 57.720 45.000 0.00 0.00 0.00 1.52
2409 3207 0.100146 GTACCTAACGTAGCTGCGCT 59.900 55.000 24.60 15.11 43.41 5.92
2431 3231 2.277084 GCAACTAAATCGTCATCCCGT 58.723 47.619 0.00 0.00 0.00 5.28
2556 3577 0.945099 TTGATTACACGCGGCAACAA 59.055 45.000 12.47 6.34 0.00 2.83
2610 3711 6.056090 TGGCAACTAGTGTTTGACCATATA 57.944 37.500 0.00 0.00 33.52 0.86
2624 3725 6.818644 ACTAGATAAACACACATGGCAACTAG 59.181 38.462 0.00 0.00 37.61 2.57
2676 3777 5.036737 GCAACTGTGATTAACCATACATGC 58.963 41.667 0.00 0.00 0.00 4.06
2771 3873 2.066262 CGTGGCAACTAGGTAACACAG 58.934 52.381 12.76 4.12 36.52 3.66
2810 3913 1.705256 GCTCGTACGTTGTTGGATGA 58.295 50.000 16.05 0.00 0.00 2.92
2829 3932 2.549282 CTTTTCGCCCACACGACG 59.451 61.111 0.00 0.00 42.78 5.12
2937 4041 4.980805 GAGTTCGCCCACACGCCA 62.981 66.667 0.00 0.00 0.00 5.69
3012 4116 4.204978 GTTTGTGTTTGCACGAATCTTGAG 59.795 41.667 4.05 0.00 46.94 3.02
3060 4164 1.659794 GTGTGGGCGTTTGCATCTT 59.340 52.632 0.00 0.00 45.35 2.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.